Metagenome / Metatranscriptome Family F078388

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078388
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	73 residues
Representative Sequence	MAGPTTAQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGLPTGFGLLLHAAVFFAVTLGLMYV
Number of Associated Samples	82
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	43.10 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	59.48 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (93.103 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (40.517 % of family members)
Environment Ontology (ENVO)	Unclassified (84.483 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (87.931 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.96% β-sheet: 3.85% Coil/Unstructured: 45.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13537	GATase_7	5.17
PF00534	Glycos_transf_1	4.31
PF00733	Asn_synthase	4.31
PF00535	Glycos_transf_2	1.72
PF13884	Peptidase_S74	1.72
PF13649	Methyltransf_25	1.72
PF14555	UBA_4	0.86
PF15899	BNR_6	0.86
PF05658	YadA_head	0.86
PF08795	DUF1796	0.86
PF00004	AAA	0.86
PF03477	ATP-cone	0.86
PF01652	IF4E	0.86
PF00194	Carb_anhydrase	0.86
PF03104	DNA_pol_B_exo1	0.86
PF08325	WLM	0.86
PF03385	STELLO	0.86
PF01734	Patatin	0.86
PF07602	DUF1565	0.86
PF04851	ResIII	0.86
PF02511	Thy1	0.86
PF00929	RNase_T	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	0.86
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.86
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.86
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.86
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.86
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
All Organisms	root	All Organisms	6.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
cellular organisms	root	All Organisms → cellular organisms	4.31 %
Viruses	superkingdom	All Organisms → Viruses	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.59 %
Varidnaviria	clade	All Organisms → Viruses → Varidnaviria	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Bamfordvirae	kingdom	All Organisms → Viruses → Varidnaviria → Bamfordvirae	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Nucleocytoviricota	phylum	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota	1.72 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	1.72 %
Ciliophora	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Intramacronucleata	subphylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1.72 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Spirotrichea	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1.72 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Oligotrichia	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia	1.72 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Strombidiidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae	1.72 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Strombidium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	1.72 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.10 %
Strombidium rassoulzadegani	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	1.72 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	1.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000162\|TB03JUN2009H_c009499	Not Available	1412	Open in IMG/M
3300000176\|TB03JUN2009E_c051179	Not Available	534	Open in IMG/M
3300000177\|TB18AUG2009H_c004042	Not Available	1837	Open in IMG/M
3300002091\|JGI24028J26656_1026273	Not Available	542	Open in IMG/M
3300002307\|JGI24890J29729_1000056	Not Available	103620	Open in IMG/M
3300003815\|Ga0007856_1001128	Not Available	2855	Open in IMG/M
3300003815\|Ga0007856_1005876	Not Available	893	Open in IMG/M
3300004684\|Ga0065168_1000604	Not Available	6074	Open in IMG/M
3300004684\|Ga0065168_1007633	Not Available	1703	Open in IMG/M
3300004685\|Ga0065177_1031077	Not Available	1007	Open in IMG/M
3300004691\|Ga0065176_1000002	Not Available	25921	Open in IMG/M
3300004777\|Ga0007827_10063140	Not Available	850	Open in IMG/M
3300004804\|Ga0007796_10225768	Not Available	546	Open in IMG/M
3300004806\|Ga0007854_10093242	Not Available	1389	Open in IMG/M
3300005662\|Ga0078894_10529015	Not Available	1056	Open in IMG/M
3300006071\|Ga0007876_1031766	Not Available	1459	Open in IMG/M
3300006072\|Ga0007881_1010417	Not Available	2823	Open in IMG/M
3300006114\|Ga0007815_1068810	Not Available	716	Open in IMG/M
3300006116\|Ga0007807_1016138	Not Available	1714	Open in IMG/M
3300006122\|Ga0007837_1008013	Not Available	1777	Open in IMG/M
3300006127\|Ga0007805_1033581	Not Available	1159	Open in IMG/M
3300006805\|Ga0075464_10032425	All Organisms → cellular organisms → Bacteria	2796	Open in IMG/M
3300007708\|Ga0102859_1165084	Not Available	652	Open in IMG/M
3300008055\|Ga0108970_10183481	Not Available	893	Open in IMG/M
3300008055\|Ga0108970_11683305	Not Available	3437	Open in IMG/M
3300009068\|Ga0114973_10000051	Not Available	68782	Open in IMG/M
3300009068\|Ga0114973_10000295	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	36960	Open in IMG/M
3300009068\|Ga0114973_10006080	Not Available	8142	Open in IMG/M
3300009151\|Ga0114962_10044543	Not Available	2955	Open in IMG/M
3300009151\|Ga0114962_10138428	Not Available	1474	Open in IMG/M
3300009151\|Ga0114962_10373761	Not Available	777	Open in IMG/M
3300009152\|Ga0114980_10008856	Not Available	6532	Open in IMG/M
3300009152\|Ga0114980_10575561	Not Available	637	Open in IMG/M
3300009154\|Ga0114963_10141047	Not Available	1438	Open in IMG/M
3300009154\|Ga0114963_10153642	Not Available	1364	Open in IMG/M
3300009154\|Ga0114963_10185497	Not Available	1213	Open in IMG/M
3300009154\|Ga0114963_10371594	Not Available	781	Open in IMG/M
3300009154\|Ga0114963_10625192	Not Available	562	Open in IMG/M
3300009158\|Ga0114977_10581308	Not Available	606	Open in IMG/M
3300009159\|Ga0114978_10134341	Not Available	1604	Open in IMG/M
3300009159\|Ga0114978_10246312	Not Available	1112	Open in IMG/M
3300009160\|Ga0114981_10353524	Not Available	794	Open in IMG/M
3300009164\|Ga0114975_10000546	Not Available	28333	Open in IMG/M
3300009182\|Ga0114959_10004877	Not Available	10153	Open in IMG/M
3300009182\|Ga0114959_10121657	Not Available	1412	Open in IMG/M
3300009185\|Ga0114971_10011849	Not Available	5761	Open in IMG/M
3300009187\|Ga0114972_10640619	Not Available	591	Open in IMG/M
3300010334\|Ga0136644_10047188	Not Available	2791	Open in IMG/M
3300010885\|Ga0133913_10043298	Not Available	12095	Open in IMG/M
3300010885\|Ga0133913_10385422	Not Available	3705	Open in IMG/M
3300010885\|Ga0133913_10630196	All Organisms → Viruses → Predicted Viral	2813	Open in IMG/M
3300010885\|Ga0133913_11011992	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2148	Open in IMG/M
3300010885\|Ga0133913_11138037	Not Available	2007	Open in IMG/M
3300010885\|Ga0133913_12402853	Not Available	1289	Open in IMG/M
3300011115\|Ga0151514_10007	Not Available	110109	Open in IMG/M
3300012000\|Ga0119951_1002267	Not Available	10683	Open in IMG/M
3300012000\|Ga0119951_1033821	Not Available	1625	Open in IMG/M
3300013004\|Ga0164293_10163882	Not Available	1639	Open in IMG/M
3300013014\|Ga0164295_10050119	Not Available	3140	Open in IMG/M
3300013014\|Ga0164295_10070190	Not Available	2612	Open in IMG/M
3300013093\|Ga0164296_1395164	Not Available	512	Open in IMG/M
3300013285\|Ga0136642_1001831	Not Available	8777	Open in IMG/M
3300013285\|Ga0136642_1047429	Not Available	1182	Open in IMG/M
3300013285\|Ga0136642_1051843	Not Available	1120	Open in IMG/M
3300013286\|Ga0136641_1002747	Not Available	6991	Open in IMG/M
3300013286\|Ga0136641_1004682	Not Available	5098	Open in IMG/M
3300018790\|Ga0187842_1000417	Not Available	21264	Open in IMG/M
3300018790\|Ga0187842_1102136	Not Available	868	Open in IMG/M
3300018790\|Ga0187842_1104178	Not Available	858	Open in IMG/M
3300018815\|Ga0187845_1010531	Not Available	3810	Open in IMG/M
3300020492\|Ga0208483_1017487	Not Available	825	Open in IMG/M
3300020704\|Ga0214250_1000749	Not Available	8860	Open in IMG/M
3300020716\|Ga0214207_1000620	All Organisms → cellular organisms → Bacteria	10022	Open in IMG/M
3300021328\|Ga0210298_1141291	Not Available	924	Open in IMG/M
3300021336\|Ga0210307_1092626	Not Available	980	Open in IMG/M
3300021354\|Ga0194047_10157156	Not Available	925	Open in IMG/M
3300021519\|Ga0194048_10017262	Not Available	3181	Open in IMG/M
3300022752\|Ga0214917_10001596	Not Available	28983	Open in IMG/M
3300023174\|Ga0214921_10000038	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	262751	Open in IMG/M
3300023174\|Ga0214921_10121766	Not Available	1871	Open in IMG/M
3300023174\|Ga0214921_10190989	Not Available	1299	Open in IMG/M
3300023184\|Ga0214919_10000370	Not Available	77014	Open in IMG/M
3300023184\|Ga0214919_10089278	Not Available	2681	Open in IMG/M
3300025363\|Ga0208385_1014748	Not Available	970	Open in IMG/M
3300025383\|Ga0208250_1010461	Not Available	1738	Open in IMG/M
3300025383\|Ga0208250_1059581	Not Available	539	Open in IMG/M
3300025401\|Ga0207955_1019628	Not Available	1267	Open in IMG/M
3300025420\|Ga0208111_1069939	Not Available	537	Open in IMG/M
3300025437\|Ga0208742_1080844	Not Available	518	Open in IMG/M
3300025896\|Ga0208916_10360992	Not Available	634	Open in IMG/M
3300027581\|Ga0209651_1054962	Not Available	1178	Open in IMG/M
3300027712\|Ga0209499_1000073	Not Available	68922	Open in IMG/M
3300027734\|Ga0209087_1013984	Not Available	4042	Open in IMG/M
3300027741\|Ga0209085_1180274	Not Available	871	Open in IMG/M
3300027746\|Ga0209597_1032341	Not Available	2740	Open in IMG/M
3300027747\|Ga0209189_1072980	Not Available	1595	Open in IMG/M
3300027747\|Ga0209189_1396738	Not Available	513	Open in IMG/M
3300027754\|Ga0209596_1013667	Not Available	5187	Open in IMG/M
3300027759\|Ga0209296_1063173	Not Available	1883	Open in IMG/M
3300027760\|Ga0209598_10000646	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	28334	Open in IMG/M
3300027763\|Ga0209088_10000005	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	245545	Open in IMG/M
3300027763\|Ga0209088_10000006	Not Available	239697	Open in IMG/M
3300027763\|Ga0209088_10044376	Not Available	2182	Open in IMG/M
3300027963\|Ga0209400_1127031	Not Available	1144	Open in IMG/M
3300027969\|Ga0209191_1000152	Not Available	55959	Open in IMG/M
3300027969\|Ga0209191_1107240	Not Available	1183	Open in IMG/M
3300027971\|Ga0209401_1016425	Not Available	3896	Open in IMG/M
3300027973\|Ga0209298_10358934	Not Available	555	Open in IMG/M
3300028025\|Ga0247723_1100487	Not Available	731	Open in IMG/M
3300028027\|Ga0247722_10285982	Not Available	566	Open in IMG/M
3300028393\|Ga0304728_1056245	Not Available	1613	Open in IMG/M
3300031963\|Ga0315901_10275157	Not Available	1409	Open in IMG/M
3300034013\|Ga0334991_0242223	Not Available	758	Open in IMG/M
3300034022\|Ga0335005_0556399	Not Available	629	Open in IMG/M
3300034051\|Ga0335024_0616527	Not Available	517	Open in IMG/M
3300034060\|Ga0334983_0291206	Not Available	979	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Host-Associated	Host-Associated	1.72%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.55%
Terrestrial	Environmental → Terrestrial	1.72%
Plants	Host-Associated → Plants	1.72%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.24%
Marine	Environmental → Aquatic → Marine	4.31%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.72%
Leaf	Host-Associated → Plants → Leaf	1.72%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	64.66%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.72%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.59%
Coastal	Environmental → Aquatic → Marine → Coastal	1.72%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	64.66%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	21.55%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.59%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.59%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.59%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	40.52%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	18.10%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.07%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.34%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.59%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.59%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	1.72%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.72%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.72%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.72%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.72%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000162	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000177	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 hypolimnion	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004691	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (version 2)	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006114	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09	Environmental	Open in IMG/M
3300006116	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011115	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016May	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300018790	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41	Environmental	Open in IMG/M
3300018815	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_68	Environmental	Open in IMG/M
3300020492	Freshwater microbial communities from Lake Mendota, WI - 01JUN2011 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020704	Freshwater microbial communities from Trout Bog Lake, WI - 29JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300021328	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R877 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025363	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH11Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025420	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025437	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034051	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009H_0094993	3300000162	Freshwater	MAGPTSAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAAVFFAVTLG
TB03JUN2009E_0511791	3300000176	Freshwater	MAGPTSAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGL
TB18AUG2009H_0040422	3300000177	Freshwater	MAGPTSAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAAVFFAVTLGLMYV*
JGI24028J26656_10262731	3300002091	Lentic	MPAPTDVQKLQISAFQGLLFYIIANPITFRVMDGLVTSVTGPYTTFRIFESGVPTGFGLMVHAFVFFAVTLGLMYV*
JGI24890J29729_100005619	3300002307	Lentic	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRXFENGLPTGFGLLLHAAVFFAVTLGLMYV*
Ga0007856_10011283	3300003815	Freshwater	MAGPTASQKIQISAFQGLLFYILANPITFKVVDGLITSMTGPYTAMRVFENGLPTGFGLLLHATVFFLITWGLMYI*
Ga0007856_10058762	3300003815	Freshwater	MAGPTASQKIQISAFQGLLFYILANPITFKVVDGLITSMTGPYTAMRVFENGLPTGFGLLLHATLFFLITWGLMYI*
Ga0065168_10006042	3300004684	Freshwater	MPAPTDAQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLMVHAFVFFAVTLGLMYI*
Ga0065168_10076331	3300004684	Freshwater	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAG
Ga0065177_10310771	3300004685	Freshwater	MPSPTELQKLQISAFQGLLFYILANPITFRVVDGLVTQVTGPYTMFRVFENGLPTGFGLLLHSFVFFAVTLALMYI*
Ga0065176_100000212	3300004691	Freshwater	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAGVFFAVTLGLMYV*
Ga0007827_100631402	3300004777	Freshwater	SPTELQKLQISAFQGLLFYILANPITFRVVDGLVTQVTGPYTMFRVFENGLPTGFGLLLHSFVFFAVTLALMYI*
Ga0007796_102257681	3300004804	Freshwater	MTTLGHSQKMQISAFQALLFYILANPITFRVVDGLITSITGPYTPLRVYENNAPTGFGLLLHSAVFFAVTWGLMYI*
Ga0007854_100932421	3300004806	Freshwater	MPAPTDTQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLMVHAFVFFAVTLGLMYV*
Ga0078894_105290152	3300005662	Freshwater Lake	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHSFVFFAVTLGLMYV*
Ga0007876_10317661	3300006071	Freshwater	FQGLLFYILANPITFRVVDGLITQVTGPYTMFRVFENGLPTGFGLLLHSFVFFAVTLALMYI*
Ga0007881_10104173	3300006072	Freshwater	MPSPTDAQKLQISAFQGLLFYILANPITFRVVDGLITQVTGPYTMFRVFENGLPTGFGLLLHSFVFFAVTLALMYI*
Ga0007815_10688101	3300006114	Freshwater	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAGVFFAVTLGLMY
Ga0007807_10161385	3300006116	Freshwater	ASQKIQISAFQGLLFYILANPITFKVVDGLITSMTGPYTAMRVFENGLPTGFGLLLHATVFFLITWGLMYI*
Ga0007837_10080132	3300006122	Freshwater	MAGHTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAGVFFAVTLGLMYV*
Ga0007805_10335811	3300006127	Freshwater	MPSPTDAQKLQISAFQGLLFYILANPITFRVVDGLITQVTGPYTMFRVFENGLPTGFGLLLHSFVFFAVTL
Ga0075464_100324251	3300006805	Aqueous	MPAPTDMQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGIPTGIGLLVHAAVFFAVTMGLMYI*
Ga0102859_11650841	3300007708	Estuarine	MQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGVPTGIGLLVHAAVFFAVTMGLMYI*
Ga0108970_101834811	3300008055	Estuary	MAGPTAVQKLQISAFQGLLFYILANPITFRVMDGIVTSMTGPYTTFRIFENGLPTGFGLLLHSAVFFAVTLGLMYV*
Ga0108970_116833053	3300008055	Estuary	MQKLQISAFQGLLFYILANPITFRVVDGLSTSVSGPRVFENGIPTGIGLLVHAAVFFAVTMGLMYI*
Ga0114973_1000005127	3300009068	Freshwater Lake	MQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGIPTGIGLLVHAAVFFAVTMGLMYI*
Ga0114973_100002954	3300009068	Freshwater Lake	MAALSHLQKAQISAFQALLFYILANPITFRVMDRLVVQVTGPYSMFRIAAEDGTPTGFGLLLHASVFFAVTLGLMYV*
Ga0114973_100060803	3300009068	Freshwater Lake	MAGPTATQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGLPTGFGLLLHSFVFFAVTLGLMYV*
Ga0114962_100445434	3300009151	Freshwater Lake	MTALGHSQKAQISAFQALLFYILANPITFRVVDGLITSITGPYTPLRVYENNAPTGFGLLLHSAVFFAVTWGLMYI*
Ga0114962_101384281	3300009151	Freshwater Lake	KMQISAFQALLFYVLANPITFSVIDRIIVRVVGPYTMFRVAEEGKPTGFGLLLHASVFFAVTWGLMYV*
Ga0114962_103737611	3300009151	Freshwater Lake	MPEPTNTQKLQISAFQGLLFYILANPITFRVVDGLSTSVGGPRVFENGIPTGVGLLVHAAVFFAVTLGLMYI*
Ga0114980_100088565	3300009152	Freshwater Lake	MAVLGHSHKIQISAFQALLFFILANPITFSVVDSLIMSVLGPYSSMRVTEEGTPTGFGIMLHASLFFAVTLALMYV*
Ga0114980_105755612	3300009152	Freshwater Lake	MAGPTATQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGLPTGFG
Ga0114963_101410473	3300009154	Freshwater Lake	MPAPTDTQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTG
Ga0114963_101536422	3300009154	Freshwater Lake	MAALTHMQKAQISAFQALLFYILANPITFSVLDRMIVQAVGPYTVFRVAEEGMPTGFGLLLLAFLFFAITWGLMYV*
Ga0114963_101854972	3300009154	Freshwater Lake	MAVLSHMQKAQISAFQALLFYILANPITFSVLDQMVVRAIGPYTMFRIAEEGMPTGFGLLFLAAVFFAVTLGLMYV*
Ga0114963_103715941	3300009154	Freshwater Lake	MPEPTNTQKLQISAFQGLLFYILANPITFRVVDGLSTSVGGPRVFENGIPTGVGLLVHAAVFFAVTPGLMYI*
Ga0114963_106251922	3300009154	Freshwater Lake	MAALSHMQKAQISAFQALLFYILANPITFSVMDKLVVQVVGPYTALRIAENGGSPTGFGLLLHAA
Ga0114977_105813082	3300009158	Freshwater Lake	MPAPTDMQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAGVFFAVTLGLMYV*
Ga0114978_101343413	3300009159	Freshwater Lake	MAGPTAAQKLQISAFQGLLFYVLANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAGVFFAVTLGLMYV*
Ga0114978_102463122	3300009159	Freshwater Lake	MTTIGNSQKVQISAFQALLFYILANPITFRVVDGLITAITGPYTSLRVYENNAPTGFGILLHSVVFFAVTLGLMYV*
Ga0114981_103535242	3300009160	Freshwater Lake	MPAPTDMQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGVPTGIGLLVHAAVFFAVTMGLMYI*
Ga0114975_1000054622	3300009164	Freshwater Lake	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHSGVFFAVTLGLMYV*
Ga0114959_100048772	3300009182	Freshwater Lake	MAHIGDSQKVQISAFQALLFYILVNPITFRVVDGLIAQVLGPYTSLRVYENNAPTGFGLLLHSAVFFGVTLGLMYI*
Ga0114959_101216572	3300009182	Freshwater Lake	MPGPTNTQKLQISAFQGLLFYILANPITFRVVDGLSTSVGGPRVFENGIPTGVGLLVHAAVFFAVTLGLMYI*
Ga0114971_100118493	3300009185	Freshwater Lake	MTTLGHSQKAQISAFQALLFYILANPITFRVVDGLITTITGPYTPLRVYENNAPTGFGILLHSAVFFAVTWGLMYL*
Ga0114972_106406192	3300009187	Freshwater Lake	MPAPTDMQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGIPTGIGLLVHAAVFFAVTMGLTYI*
Ga0136644_100471882	3300010334	Freshwater Lake	MQKAQISAFQALLFYILANPITFSVLDRMIVQAVGPYTVFRVAEEGMPTGFGLLLLAFLFFAITWGLMYV*
Ga0133913_1004329813	3300010885	Freshwater Lake	MTTLGHSQKAQISAFQALLFYILANPITFRVVDGVITSVTGPYTPLRVYENNAPTGFGLLLHTAVFFAVTLGLMYV*
Ga0133913_103854224	3300010885	Freshwater Lake	MAVLSNTQKMQISAFQALLFYVLANPITFSVIDRIIVQVVGPYTMFRVAEEGKPTGFGLLLHASVFFAVTWGLMYV*
Ga0133913_106301964	3300010885	Freshwater Lake	MAGPTPTQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGLPTGFGLLLHSFVFFAVTLGLMYV*
Ga0133913_110119922	3300010885	Freshwater Lake	MTTLGHSQKAQISAFQALLFYILANPITFRVVDGLVTSVAGPYTSLRVYENNAPTGFGLLLHAFVFFAVTWGLMYI*
Ga0133913_111380371	3300010885	Freshwater Lake	MAALSHMQKAQISAFQALLFYILANPITFSVMDKLVVQVVGPYTALRIAENGGSPTGFGLLLHAAVFFAITWGLMYV*
Ga0133913_124028532	3300010885	Freshwater Lake	MAGPTTAQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGLPTGFGLLLHAAVFFAVTLGLMYV*
Ga0151514_1000790	3300011115	Freshwater	MQISAFQALLFYILANPITFSVVDKLIVQVTGPYTMFRVAEEGKPTGFGLLLHAGVFFAVTWGLMYV*
Ga0119951_10022674	3300012000	Freshwater	MALGFAEKAQISAFQALLFYIIANPITFSVVDSLVSVITGPYSSFKVAHGGNPTGFGLLLHAFVFFLITLALMYV*
Ga0119951_10338212	3300012000	Freshwater	MAVTDLQKLQISAFQGLLFYVLANPITYSIVDGLFSSITGTYSNWKIAHGGNPTGFGLLVHSVVFFAVTLGLMYI*
Ga0164293_101638822	3300013004	Freshwater	MAVLGHSQKVQISAFQALLFFILANPITFSVVDSLIMSVVGPYSSMRVAEGGSPTGFGLMLHAAVFFAVTLGLMYV*
Ga0164295_100501192	3300013014	Freshwater	MAVLGHSQKVQISAFQALLFFILANPITFSVVDSLIMSVLGPYSSMRVTEGGSPTGFGLMLHAAVFFAVTLGLMYV*
Ga0164295_100701903	3300013014	Freshwater	MAALSHLQKAQISAFQALLFYILANPITFRVMDRLVVQVTGPYSMFRIAAEDGTPTGFGLLLHAGVFFAVTLGLMYV*
Ga0164296_13951642	3300013093	Freshwater	MPAPTDTQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLMVHAFVFFAV
Ga0136642_10018319	3300013285	Freshwater	MAVLGHSQKVQISAFQALLFFILANPITFSVVDSLIVGATGPYTPLRVMENGVPTGFGLLLHSGVFFAVTLGLMYV*
Ga0136642_10474292	3300013285	Freshwater	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTAFRIFENGLPTGFGLLLHASVFFAVTLGLMYV*
Ga0136642_10518432	3300013285	Freshwater	MPAPTDTQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLLVHSAVFFAVTLGLMYV*
Ga0136641_10027471	3300013286	Freshwater	IRKTMAGPTAAQKLQISAFQGLLFYILANPITFRVMDSLVTSMTGPYTTFRIFENGLPTGFGLLLHASVFFAVTLGLMYV*
Ga0136641_10046825	3300013286	Freshwater	MPAPTDAQKLQISAFQGLLFYIIANPITFRVVDGLVTSVTGPYTTFRIFENGVPTGFGLLVHSAVFFAVTLGLMYI*
Ga0187842_100041720	3300018790	Freshwater	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAGVFFAVTLGLMYV
Ga0187842_11021362	3300018790	Freshwater	MQKMQISAFQALLFYILANPITFSVVDKLIVQVTGPYTMFRVAEEGKPTGFGLLLHAGVFFAVTWGLMYV
Ga0187842_11041782	3300018790	Freshwater	MTALGHSQKAQISAFQALLFYILANPITFRVVDGLITSMTGPYTPLRVYENNAPTGFGLLLHSGVFFAVTWGLMYL
Ga0187845_10105314	3300018815	Freshwater	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAAVFFAVTLGLMYV
Ga0208483_10174872	3300020492	Freshwater	MAVLGHSQKVQISAFQALLFFILANPITFSVVDSLIMSVVGPYSSMRVAEGGSPTGFGLMLHAAVFFAVTLGLMYV
Ga0214250_100074914	3300020704	Freshwater	MAGPTSAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAAVFFAVTLGLMYV
Ga0214207_100062014	3300020716	Freshwater	MAGPTASQKIQISAFQGLLFYILANPITFKVVDGLITSMTGPYTAMRVFENGLPTGFGLLLHATVFFLITWGLMYI
Ga0210298_11412911	3300021328	Estuarine	ISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLMVHAFVFFAATLGLMYV
Ga0210307_10926261	3300021336	Estuarine	MPAPTDMQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGVPTGIGLLVHAAVFFAVTMGLMYI
Ga0194047_101571562	3300021354	Anoxic Zone Freshwater	MPAPTDAQKLQISAFQGLLFYIIANPITFRVVDGLVTSVTGTYTTFRIFENGVPTGFGLMVHAFVFFAVTLGLMYI
Ga0194048_100172622	3300021519	Anoxic Zone Freshwater	MAVLGHSQKIQISAFQALLFFILANPITFSVMDSLIMSVLGPYSSMRVTEGGSPTGFGLMLHATVFFAVTLALMYV
Ga0214917_1000159628	3300022752	Freshwater	MALGFAEKAQISAFQALLFYIIANPITFSVVDSLVSVITGPYSSFKVAHGGNPTGFGLLLHAFVFFLITLALMYV
Ga0214921_10000038100	3300023174	Freshwater	MTVTDTQKLQISAFQGLLFYILANPITFRVVDGLVTSLTGPYTTMRVFENGIPTGFGLMVHAFVFFAVTLGLMYI
Ga0214921_101217663	3300023174	Freshwater	MTTLGHSQKAQISAFQALLFYILANPITFRVVDGLITSITGPYTPLRVYENNTPTGFGILLHSAVFFAVTWGLMYI
Ga0214921_101909891	3300023174	Freshwater	MTTLGHSQKMQISAFQALLFYILANPITFRVVDGLITSITGPYTPLRVYENNAPTGFGLLLHSAVFFAVTWGL
Ga0214919_1000037069	3300023184	Freshwater	MTTLGHSQKAQISAFQALLFYILANPITFRVVDGLITSMTGPYTPLRVYENNAPTGFGLLLHSGVFFAVTWGLMYL
Ga0214919_100892783	3300023184	Freshwater	MTTLGHSQKMQISAFQALLFYILANPITFRVVDGLITSITGPYTPLRVYENNAPTGFGLLLHSAVFFAVTWGLMYI
Ga0208385_10147482	3300025363	Freshwater	MPSPTELQKLQISAFQGLLFYILANPITFRVVDGLVTQVTGPYTMFRVFENGLPTGFGLLLHSFVFFAVTLALMYI
Ga0208250_10104612	3300025383	Freshwater	MPSPTDAQKLQISAFQGLLFYILANPITFRVVDGLITQVTGPYTMFRVFENGLPTGFGLLLHSFVFFAVTLALMYI
Ga0208250_10595812	3300025383	Freshwater	MAGPTASQKIQISAFQGLLFYILANPITFKVVDGLITSMTGPYTAMRVFENGLPTGFGLLLHA
Ga0207955_10196282	3300025401	Freshwater	MPAPTDAQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLMVHAFVFFAVTLGLMYI
Ga0208111_10699391	3300025420	Freshwater	MPAPTDTQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLMVHAFVFFAVTLGLMYV
Ga0208742_10808441	3300025437	Freshwater	MAGPTASQKIQISAFQGLLFYILANPITFKVVDGLITSMTGPYTAMRVFENGLPTGFGLLLHATLFFLIT
Ga0208916_103609922	3300025896	Aqueous	MPAPTDMQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGIPTGIGLLVHAAVFFAVTLGLMYI
Ga0209651_10549623	3300027581	Freshwater Lake	MAHIGDSQKVQISAFQALLFYILANPITFRVVDGLITQVLGPYTSLRVYDNNAPTGFGLLLHSAVFFAVTLGLMYV
Ga0209499_10000733	3300027712	Freshwater Lake	MPEPTNTQKLQISAFQGLLFYILANPITFRVVDGLSTSVGGPRVFENGIPTGVGLLVHAAVFFAVTLGLMYI
Ga0209087_10139843	3300027734	Freshwater Lake	MTTIGNSQKVQISAFQALLFYILANPITFRVVDGLITAITGPYTSLRVYENNAPTGFGILLHSVVFFAVTLGLMYV
Ga0209085_11802742	3300027741	Freshwater Lake	MAVLSHMQKAQISAFQALLFYILANPITFSVLDQMVVRAIGPYTMFRIAEEGMPTGFGLLFLAAVFFAVTLGLMYV
Ga0209597_10323413	3300027746	Freshwater Lake	MTTLGHSQKAQISAFQALLFYILANPITFRVVDGLITTITGPYTPLRVYENNAPTGFGILLHSAVFFAVTWGLMYL
Ga0209189_10729803	3300027747	Freshwater Lake	MQKAQISAFQALLFYILANPITFSVLDRMIVQAVGPYTVFRVAEEGMPTGFGLLLLAFL
Ga0209189_13967381	3300027747	Freshwater Lake	PTNTQKLQISAFQGLLFYILANPITFRVVDGLSTSVGGPRVFENGIPTGVGLLVHAAVFFAVTLGLMYI
Ga0209596_10136672	3300027754	Freshwater Lake	MPAPTDMQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGIPTGIGLLVHAAVFFAVTMGLMYI
Ga0209296_10631734	3300027759	Freshwater Lake	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHSFVFFAVTLGLMYV
Ga0209598_1000064623	3300027760	Freshwater Lake	MAALSHLQKAQISAFQALLFYILANPITFRVMDRLVVQVTGPYSMFRIAAEDGTPTGFGLLLHASVFFAVTLGLMYV
Ga0209088_10000005187	3300027763	Freshwater Lake	MAGPTATQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGLPTGFGLLLHSFVFFAVTLGLMYV
Ga0209088_10000006187	3300027763	Freshwater Lake	MAVLGHSHKIQISAFQALLFFILANPITFSVVDSLIMSVLGPYSSMRVTEEGTPTGFGIMLHASLFFAVTLALMYV
Ga0209088_100443764	3300027763	Freshwater Lake	MAGPTAAQKLQISAFQGLLFYVLANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHAGVFFAVTLGLMYV
Ga0209400_11270312	3300027963	Freshwater Lake	MQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGIPTGIGLLVHAAVFFAVTMGLMYI
Ga0209191_10001523	3300027969	Freshwater Lake	MAGPTAAQKLQISAFQGLLFYILANPITFRVMDGLVTSMTGPYTTFRIFENGLPTGFGLLLHSGVFFAVTLGLMYV
Ga0209191_11072401	3300027969	Freshwater Lake	MQKLQISAFQGLLFYILANPITFRVVDGLSRSISGPRVFENGVPTGIGLLVHAAVFFAVTMGLMYI
Ga0209401_10164251	3300027971	Freshwater Lake	MAGPTATQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGLPTGFGLLLHSFVFFAVTLGL
Ga0209298_103589342	3300027973	Freshwater Lake	MAGPTATQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGL
Ga0247723_11004872	3300028025	Deep Subsurface Sediment	MQKMQISAFQALLFYILANPITFSVVDKLVVQVTGPYTMFRVAEEGKPTGFGLLLHAGVFFAVTWGLMYV
Ga0247722_102859822	3300028027	Deep Subsurface Sediment	MANIGDSQKVQISAFQALLFYILANPITFRVVDGLITSVTGPYTPLRVYESNAPTGFGLLLHSAVFFAVTLGLMYL
Ga0304728_10562453	3300028393	Freshwater Lake	MAHIGDSQKVQISAFQALLFYILVNPITFRVVDGLIAQVLGPYTSLRVYENNAPTGFGLLLHSAVFFGVTLGLMYI
Ga0315901_102751573	3300031963	Freshwater	MAFGLTEKAQISAFQALLFYVLANPITFSVMDALFSAVTGPYSNLKIAHRGNPTGFGLLVHAGVFFAVTLALMYV
Ga0334991_0242223_169_399	3300034013	Freshwater	MPAPTDTQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLMVHAFVFFAATLGLMYV
Ga0335005_0556399_418_627	3300034022	Freshwater	QKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGLMVHAFVFFAATLGLMYV
Ga0335024_0616527_2_178	3300034051	Freshwater	MPAPTDTQKLQISAFQGLLFYILANPITFRVMDGLVTSVTGPYTTFRIFENGVPTGFGL
Ga0334983_0291206_2_211	3300034060	Freshwater	QKLQISAFQGLLFYILANPITFRVMDGLITSMTGPYTTFRIFENGLPTGFGLLLHSFVFFAVTLGLMYV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078388

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences