Metagenome Family F078362

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078362
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	81 residues
Representative Sequence	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFGRWADEWWEVWAADPDRSPT
Number of Associated Samples	85
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.35 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.483 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.034 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.069 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.03% β-sheet: 18.35% Coil/Unstructured: 48.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13148	DUF3987	18.10
PF10935	DUF2637	1.72
PF02371	Transposase_20	1.72
PF08241	Methyltransf_11	0.86
PF09339	HTH_IclR	0.86
PF00196	GerE	0.86
PF12307	DUF3631	0.86
PF01609	DDE_Tnp_1	0.86
PF09250	Prim-Pol	0.86
PF01527	HTH_Tnp_1	0.86
PF01610	DDE_Tnp_ISL3	0.86
PF13683	rve_3	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.72
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.86
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.86
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.86
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
All Organisms	root	All Organisms	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
cellular organisms	root	All Organisms → cellular organisms	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.72 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.76 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.72 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.86 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.72 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.86 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.86 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.86 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Frankia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	0.86 %
Actinoplanes nipponensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes nipponensis	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_103753892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300005562\|Ga0058697_10682919	Not Available	545	Open in IMG/M
3300005981\|Ga0081538_10285933	Not Available	611	Open in IMG/M
3300006844\|Ga0075428_100140087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2630	Open in IMG/M
3300006844\|Ga0075428_101273723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300006845\|Ga0075421_100451486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	1536	Open in IMG/M
3300006880\|Ga0075429_100775615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	840	Open in IMG/M
3300009094\|Ga0111539_10625658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1253	Open in IMG/M
3300009094\|Ga0111539_13186434	Not Available	529	Open in IMG/M
3300009100\|Ga0075418_10826958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300009100\|Ga0075418_11043588	Not Available	885	Open in IMG/M
3300009147\|Ga0114129_11200005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	945	Open in IMG/M
3300009147\|Ga0114129_12928592	Not Available	564	Open in IMG/M
3300009147\|Ga0114129_13093105	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	544	Open in IMG/M
3300009162\|Ga0075423_12030872	Not Available	623	Open in IMG/M
3300009789\|Ga0126307_10337927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1212	Open in IMG/M
3300009789\|Ga0126307_10670300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300009798\|Ga0105060_100171	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300009820\|Ga0105085_1017933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1224	Open in IMG/M
3300009821\|Ga0105064_1006776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	1969	Open in IMG/M
3300009840\|Ga0126313_10406213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1081	Open in IMG/M
3300010039\|Ga0126309_11046495	Not Available	551	Open in IMG/M
3300010040\|Ga0126308_10449610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	865	Open in IMG/M
3300010040\|Ga0126308_10948440	Not Available	601	Open in IMG/M
3300010041\|Ga0126312_10527686	Not Available	846	Open in IMG/M
3300010042\|Ga0126314_10257998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1238	Open in IMG/M
3300010042\|Ga0126314_11031474	Not Available	611	Open in IMG/M
3300010044\|Ga0126310_10937829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes nipponensis	677	Open in IMG/M
3300010045\|Ga0126311_10596079	Not Available	874	Open in IMG/M
3300010045\|Ga0126311_11237181	Not Available	619	Open in IMG/M
3300010166\|Ga0126306_10218491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1445	Open in IMG/M
3300010362\|Ga0126377_13134162	Not Available	534	Open in IMG/M
3300012204\|Ga0137374_10593051	Not Available	846	Open in IMG/M
3300012210\|Ga0137378_10575532	Not Available	1035	Open in IMG/M
3300012353\|Ga0137367_10793709	Not Available	657	Open in IMG/M
3300012356\|Ga0137371_11049804	Not Available	615	Open in IMG/M
3300012358\|Ga0137368_10963968	Not Available	514	Open in IMG/M
3300012360\|Ga0137375_10532812	Not Available	992	Open in IMG/M
3300014487\|Ga0182000_10160420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824	Open in IMG/M
3300015372\|Ga0132256_101815624	Not Available	718	Open in IMG/M
3300015374\|Ga0132255_105282721	Not Available	547	Open in IMG/M
3300018028\|Ga0184608_10339904	Not Available	659	Open in IMG/M
3300018465\|Ga0190269_11813880	Not Available	521	Open in IMG/M
3300018466\|Ga0190268_11699897	Not Available	562	Open in IMG/M
3300018466\|Ga0190268_11966166	Not Available	536	Open in IMG/M
3300018469\|Ga0190270_11356672	Not Available	756	Open in IMG/M
3300018476\|Ga0190274_11340516	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300018481\|Ga0190271_12642261	Not Available	602	Open in IMG/M
3300019377\|Ga0190264_12183927	Not Available	515	Open in IMG/M
3300021510\|Ga0222621_1070497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300022694\|Ga0222623_10113674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1054	Open in IMG/M
3300027561\|Ga0209887_1037789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1078	Open in IMG/M
3300027718\|Ga0209795_10155948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300027873\|Ga0209814_10389767	Not Available	612	Open in IMG/M
3300027909\|Ga0209382_10520934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1306	Open in IMG/M
3300028592\|Ga0247822_11916567	Not Available	508	Open in IMG/M
3300028707\|Ga0307291_1084482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	784	Open in IMG/M
3300028717\|Ga0307298_10047501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1172	Open in IMG/M
3300028717\|Ga0307298_10050748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300028718\|Ga0307307_10239090	Not Available	579	Open in IMG/M
3300028719\|Ga0307301_10238201	Not Available	593	Open in IMG/M
3300028722\|Ga0307319_10135705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300028771\|Ga0307320_10211359	Not Available	760	Open in IMG/M
3300028771\|Ga0307320_10325341	Not Available	612	Open in IMG/M
3300028771\|Ga0307320_10442695	Not Available	523	Open in IMG/M
3300028778\|Ga0307288_10338947	Not Available	604	Open in IMG/M
3300028782\|Ga0307306_10192705	Not Available	581	Open in IMG/M
3300028787\|Ga0307323_10274155	Not Available	607	Open in IMG/M
3300028791\|Ga0307290_10296130	Not Available	593	Open in IMG/M
3300028811\|Ga0307292_10005236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4379	Open in IMG/M
3300028811\|Ga0307292_10460990	Not Available	543	Open in IMG/M
3300028814\|Ga0307302_10016819	Not Available	3295	Open in IMG/M
3300028814\|Ga0307302_10600053	Not Available	547	Open in IMG/M
3300028819\|Ga0307296_10652498	Not Available	575	Open in IMG/M
3300028824\|Ga0307310_10090610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1345	Open in IMG/M
3300028875\|Ga0307289_10061940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1504	Open in IMG/M
3300028876\|Ga0307286_10079504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300028876\|Ga0307286_10119924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300028878\|Ga0307278_10311534	Not Available	695	Open in IMG/M
3300028880\|Ga0307300_10031588	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300028880\|Ga0307300_10094859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300028881\|Ga0307277_10141905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1038	Open in IMG/M
3300028881\|Ga0307277_10424369	Not Available	595	Open in IMG/M
3300030336\|Ga0247826_11389788	Not Available	567	Open in IMG/M
3300030510\|Ga0268243_1019284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1336	Open in IMG/M
3300030511\|Ga0268241_10186154	Not Available	522	Open in IMG/M
3300030516\|Ga0268255_10254197	Not Available	505	Open in IMG/M
3300031548\|Ga0307408_101973865	Not Available	561	Open in IMG/M
3300031731\|Ga0307405_11780636	Not Available	547	Open in IMG/M
3300031731\|Ga0307405_11848385	Not Available	538	Open in IMG/M
3300031824\|Ga0307413_10305156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1209	Open in IMG/M
3300031824\|Ga0307413_11897139	Not Available	535	Open in IMG/M
3300031852\|Ga0307410_12013100	Not Available	515	Open in IMG/M
3300031901\|Ga0307406_10884854	Not Available	759	Open in IMG/M
3300031903\|Ga0307407_11448083	Not Available	542	Open in IMG/M
3300031995\|Ga0307409_101441264	Not Available	715	Open in IMG/M
3300031995\|Ga0307409_101498905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300031995\|Ga0307409_102163864	Not Available	586	Open in IMG/M
3300031995\|Ga0307409_102234490	Not Available	576	Open in IMG/M
3300032002\|Ga0307416_100638190	All Organisms → cellular organisms → Bacteria → Proteobacteria	1148	Open in IMG/M
3300032002\|Ga0307416_101334314	Not Available	823	Open in IMG/M
3300032002\|Ga0307416_101527596	Not Available	773	Open in IMG/M
3300032002\|Ga0307416_102804815	Not Available	583	Open in IMG/M
3300032002\|Ga0307416_103810054	Not Available	505	Open in IMG/M
3300032004\|Ga0307414_10474513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1102	Open in IMG/M
3300032004\|Ga0307414_12291655	Not Available	504	Open in IMG/M
3300032005\|Ga0307411_11977036	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300032126\|Ga0307415_100715964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	905	Open in IMG/M
3300033550\|Ga0247829_11179242	Not Available	635	Open in IMG/M
3300033550\|Ga0247829_11207147	Not Available	627	Open in IMG/M
3300033550\|Ga0247829_11756568	Not Available	511	Open in IMG/M
3300033551\|Ga0247830_11044229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300034115\|Ga0364945_0172236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	655	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.93%
Host-Associated	Host-Associated	37.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.34%
Plants	Host-Associated → Plants	37.07%
Aquatic	Environmental → Aquatic	2.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.90%
Sediment	Environmental → Aquatic → Sediment	2.59%
Phylloplane	Host-Associated → Plants → Phylloplane	2.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Floodplain	Environmental → Terrestrial → Floodplain	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	31.03%
Sand	Environmental → Terrestrial → Soil → Sand	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	31.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.17%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	18.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.07%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.17%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009798	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1037538922	3300004463	Arabidopsis Thaliana Rhizosphere	MGSVSWRKRGDRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRRSFSQWADDWWEVWAADPDRSPTTLA
Ga0058697_106829191	3300005562	Agave	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFSRWADEWWELYS
Ga0081538_102859332	3300005981	Tabebuia Heterophylla Rhizosphere	MGSVTWRKRGLRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLSFGRWADEWWELYSTDPDRSPNTLAITESRLRLHVRPWFGDLAQAWPPLPGLLAAG*
Ga0075428_1001400873	3300006844	Populus Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGAQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWAT
Ga0075428_1012737231	3300006844	Populus Rhizosphere	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEMSRSTWQGRRRGRLPFSRWADEWWAVWS
Ga0075421_1004514862	3300006845	Populus Rhizosphere	MGSVNWRKRGNRYQVAWRLEDGSKGAKTVATKEEALDLVAEKRLEMSRNAWQGRRRGRLPFSRW
Ga0075429_1007756151	3300006880	Populus Rhizosphere	MGSVSWRKRGHRYLVSWRLADGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEW
Ga0111539_106256581	3300009094	Populus Rhizosphere	MGSVSWRRRGHRYLVSWRLDDAQGGRTVDTPDEARDLAAEKRLEMRRGTWRERRSGREPFWQWADDWWDVWAADPDRSPTTLAAT
Ga0111539_131864341	3300009094	Populus Rhizosphere	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEMRRSTWQGRRRGRHPFSQWAD
Ga0075418_108269581	3300009100	Populus Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEP
Ga0075418_110435881	3300009100	Populus Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRHSFRQWADDWWEVWAADP
Ga0114129_112000051	3300009147	Populus Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVATPDEARDLAAEKRLEMRRGTWRERRSGRLSFGRWA
Ga0114129_129285921	3300009147	Populus Rhizosphere	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLLFSRWADDWWELYSTDPDRSP
Ga0114129_130931052	3300009147	Populus Rhizosphere	LPGRSGSVSWRKRGHRYLVSWRLADGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWDTWVADDPSPTSLASAESRLRLHLRPWF
Ga0075423_120308721	3300009162	Populus Rhizosphere	MGSVTWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRQSFNAWATEWWDTWVADEPSPTS
Ga0105249_102337403	3300009553	Switchgrass Rhizosphere	MGSVSWRKRGNRYLVSWRMDDGSQGGQTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLAF*
Ga0126307_103379271	3300009789	Serpentine Soil	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEISRNTWQGRRRGRLPFGRWADEWWTVWSTDPSRSPTTLAATEIR
Ga0126307_106703002	3300009789	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWQGRRRGRLPFSRWADEWWETWVADEPSPTSLASAE
Ga0105060_1001713	3300009798	Groundwater Sand	MGSVTWRKRGNRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGCRRGRLPFRRW
Ga0105085_10179331	3300009820	Groundwater Sand	MGSVNWRKRGNRYLVSWRLDDGAQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLPFSAWAAEWWETWAADDPSPTTLAATESWLRLHVRPWFA
Ga0105064_10067761	3300009821	Groundwater Sand	MGSVTWRKRGNRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFSRWA
Ga0126313_104062133	3300009840	Serpentine Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLAFSRWADEWWELYSTDPDRSP
Ga0126309_110464952	3300010039	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDDARDLAAEKRLEMRRGTWRGRQRGRLAFNAWAAEWWETWAADDPSPTTLAATE
Ga0126308_104496101	3300010040	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADDPSPTSLASAESRLRLHV
Ga0126308_109484401	3300010040	Serpentine Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFNRWADEWWVLYSTDPDRSPN
Ga0126312_105276861	3300010041	Serpentine Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKHLEMRRGTWRERRSGRLSFDRWAEDWWEVWAADPDRSPTTLAATENRLRRH
Ga0126314_102579981	3300010042	Serpentine Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGAWRGRQRGRLPFSAWAAEWWETWAADAPSPTTLAATESWLRLHVLPWF
Ga0126314_110314741	3300010042	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEPSPTSLASAESRLRLHVRPWFADRPIDK
Ga0126310_109378291	3300010044	Serpentine Soil	MGSVSWRKRGNRYLVSWRMDDGSQGGKTVDTLDEARDLAAEKRLEMRRGTWRGRQRGRLPFSAWAAEWWETWAADDPSPTTL
Ga0126311_105960791	3300010045	Serpentine Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGAWRGRQRGRLAFSAWAAEWWETWAADDPSPTTLAATENWLRLHV
Ga0126311_112371811	3300010045	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGQLAFSRWAAEWWETWTADDPSPTTLAATETW
Ga0126306_102184911	3300010166	Serpentine Soil	VSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGHQRGRLSFNAWATEWWETWV
Ga0126377_131341621	3300010362	Tropical Forest Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEASDLAAEKRLEMRRGTWRERRSGPRSFSHWVDDWWEVWAADPDRSPTTLAATE
Ga0137374_105930512	3300012204	Vadose Zone Soil	MGSVSWRKRGSRYLVSWRLDDGSQGGRTVDTADEARDLAAEKRLEIRRGTWRGRQRGRLPFSTWAAEWWE
Ga0137378_105755322	3300012210	Vadose Zone Soil	MGSVNWRKRGKRYLVYWRLDDGSQGGKTVGTRDEALLLAAEKRLEIARGTWTAQQKGKRPFGEWGDTWW
Ga0137367_107937091	3300012353	Vadose Zone Soil	MGSVSWRKRGSRYLVSWRLDDGSQGGKTVDTKDEALLLAAEKRLELARSTWTTQQKGKRPFGEWG
Ga0137371_110498041	3300012356	Vadose Zone Soil	VASVNWRKRGKRYLVYWRLDDGSQGGKTVGTKDEALLLAAEKRMELARSIGTTQQKGKRPFGEWGDTWW
Ga0137368_109639682	3300012358	Vadose Zone Soil	VSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWQGRQRGRLPFSTWAAEWWETWT
Ga0137375_105328122	3300012360	Vadose Zone Soil	VGSVSWRKRGRRYLVSWRLDDGSQGGRTVDTADEARDLAAEKRLEMRRGTWRGRQRGRLPFSTWATEWWETWTADDRSPTTFA
Ga0182000_101604201	3300014487	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGHTVDTPDQARDLAAEKRPEMRRGTWRERRSGRVSFSQWADDWWEV
Ga0132256_1018156241	3300015372	Arabidopsis Rhizosphere	MGSVTWRKRGHRYQVSWRLDDGTQGAKTVDSADEARDLAAEKRLELRRGTWQGRHRGRLTFSRWADEWWELYS
Ga0132255_1052827211	3300015374	Arabidopsis Rhizosphere	MGSVTWRKRGHRYQVSWRLDDGTQGAKTVDSADEARDLAAEKRLELRRGTWQGRHRGRLTFSRWADEWWELYSTDPDRSPNTLAITESRLRLHVR
Ga0184608_103399041	3300018028	Groundwater Sediment	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRVGTWRERRSGRLSFGQWADDWWEVWAADPDRSPTTLAATEN
Ga0190272_122407811	3300018429	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFS
Ga0190269_118138801	3300018465	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTLDEARDLAAEKRLEMRRGTWRERRSGRLSFGRWADDWWEVWAADPDRSPTTLAATENRLRRHVGPWFSDRPIERIG
Ga0190268_116998971	3300018466	Soil	MASVSWRKRGNRYLVSSRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTRGRGRSGRHSFSQWADDWWEVWAADPDRSPTTLAATDNRLR
Ga0190268_119661661	3300018466	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWET
Ga0190270_113566721	3300018469	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTQDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWAADDPSPTSLASAES
Ga0190274_113405161	3300018476	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLPFSTWAAEWWETWAADDPSPTTLAATESWLRLHVRAWF
Ga0190271_126422611	3300018481	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFCQWVDD
Ga0190264_121839271	3300019377	Soil	MGSVNWRKRGNRYQVAWRLDDGSQSAKTVATKDEALDLVAEKRLEMSRNTWQGRRRGRLPFSRWADEW
Ga0222621_10704971	3300021510	Groundwater Sediment	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLELRRGTWRGRQRGRLSFNAWAT
Ga0222623_101136742	3300022694	Groundwater Sediment	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFSQWVDDWWEVWAADPDRSPTTLAATENRLRR
Ga0209887_10377891	3300027561	Groundwater Sand	VDAPAGRRLDDGAQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLPFSAWAAEWWETWAADDPSPTTLAATESWLRLHVRPWFADRPI
Ga0209795_101559482	3300027718	Agave	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEMSRNTWQGRRRGRLSFSR
Ga0209814_103897671	3300027873	Populus Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEW
Ga0209382_105209342	3300027909	Populus Rhizosphere	MGSVNWRKRGNRYQVAWRLEDGSQGAKTVATKEEALDLVAEKRLEMSRNAWQGRRRGRLPFSRWADEWWAVWSSDPSRS
Ga0247822_119165671	3300028592	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLSFSRW
Ga0307291_10844821	3300028707	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFGQWADDWWAVWAADPDRSPT
Ga0307298_100475011	3300028717	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLA
Ga0307298_100507481	3300028717	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLSFSAWAAEWWETWAADDPSPTTLAATESWLRLHVRPWFADRP
Ga0307307_102390901	3300028718	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEPSPTSLASAESRLRLHLRPWFADRPIDKIT
Ga0307301_102382011	3300028719	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGKTVDTPDEARDLTAEKRLDMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHVR
Ga0307319_101357052	3300028722	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAHKRLEMRRGTWRGRQRGRLSFNAWATEWWETWTADE
Ga0307319_101604741	3300028722	Soil	MGSVTWRKRGHRYQVSWRLDDGTQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLP
Ga0307320_102113591	3300028771	Soil	MGSVTWRKRGHRYQVSWRLDDGTQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFSRWADEWWELYSTDPDRSPNTLA
Ga0307320_103253411	3300028771	Soil	MALMGSVSWRRRGNRYLVSWRLEDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFVQWADDWWA
Ga0307320_104426951	3300028771	Soil	MGSVSWRKRGNRYLVSWRLDDGAQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFGQWADDWWEVWAADPDRSPTTLAA
Ga0307288_103389471	3300028778	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMHRGTWRGRQRGRLSFNAWATEWWDTWAADDRSPTTLAGAEIRLRLHVRPWFADRP
Ga0307306_101927051	3300028782	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLSFSAWAAEWWETWATDDPSPTTLAATESWL
Ga0307323_102741551	3300028787	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHV
Ga0307290_102961301	3300028791	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFSRWADEWWELYSTDPDRSPNTLA
Ga0307292_100052361	3300028811	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFVQWADDWWAVWAADPDRSPTTLAATENRLRRHVRPWFGDRP
Ga0307292_104609901	3300028811	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHVRPWF
Ga0307302_100168191	3300028814	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAHKRLEMRRGTWRGRQRGRLSFNAWATEWWETWTAD
Ga0307302_106000531	3300028814	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMHRGTWRGRQRGRLSFNAWATEWWET
Ga0307296_106524981	3300028819	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSP
Ga0307310_100906102	3300028824	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMHRGTWRGRQRGRLSFNAWATEWWETWVADDPSPTSLASAESRLRLHV
Ga0307289_100619402	3300028875	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFVQWADDWWAVWA
Ga0307286_100795041	3300028876	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQSGRLSFGQWADDWWAVW
Ga0307286_101199241	3300028876	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFVQWADDWWAVWAA
Ga0307278_103115342	3300028878	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAMTVDSANEARDLAAEKRLELRRGTWQGRRRGRLPFSRWADEWWE
Ga0307300_100315884	3300028880	Soil	MALMGSVSWRRRGNRYLVSWRLEDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFGQWADDWWAVWAADPDRSPTTLAATENRLRRHVR
Ga0307300_100948591	3300028880	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHVRP
Ga0307277_101419051	3300028881	Soil	MGSVNWRKRGNRYQVAWRLDDGTQGAKTVAAKDEALDLVAEKRLEMSRSTWQGRRRGRLPFSQWADEWWGVWSTDPSRSPTTL
Ga0307277_104243691	3300028881	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHVRPWFG
Ga0247826_113897882	3300030336	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFGRWADEWWEVWAADPDRSPT
Ga0268243_10192842	3300030510	Soil	MGSVTWRRRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLAFSRWADEWWELYSTDLDRSPNTLAITESRLRLHV
Ga0268241_101861541	3300030511	Soil	MGSVSWRKRGQRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGTWQGRRRGRIPFGKWADEWWAVWSTDPTRSPTTL
Ga0268255_102541971	3300030516	Agave	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFSQWV
Ga0307408_1019738651	3300031548	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTSDEARDLAAQKRLEMRRGTWRGRQRGRLSFTAWATEWWETWVADEPSPTS
Ga0307405_117806361	3300031731	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGAWRGRQRGRLPFSTWAAEWWETW
Ga0307405_118483851	3300031731	Rhizosphere	MGSVSWRRRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQSGRLSFGQWADDWWEVWAADPDRSPTTLAATENRLRRHVRPWFGD
Ga0307413_103051561	3300031824	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARNLAAEKRLEMRRGTWGRGRSGRHSFSQWADDWWEVWAADPDRSPTTL
Ga0307413_118971391	3300031824	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEPSPTSLASAESRLRLHVRPWFA
Ga0307410_120131001	3300031852	Rhizosphere	MASVNWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLPFSSWATEWWDTWAAD
Ga0307406_108848541	3300031901	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGRRSGRLSFGQWAEDWWEVWAADP
Ga0307407_114480831	3300031903	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGTWGRRRRGRQPFGQWADDWWAVWATDPDRSPTTL
Ga0307409_1014412641	3300031995	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARNLAAEKRLEMRRGTWRERRSGQRSFSQWADDWWEVWAADPDRSPTTLAATENRLRRHVRPWFG
Ga0307409_1014989051	3300031995	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWAADEPSPTSLASAESRL
Ga0307409_1021638641	3300031995	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEPSPTS
Ga0307409_1022344901	3300031995	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTSDEARDLAAQKRLEMRRSTWRGRQRGRLSFNAWATEWWETWIADEPSPTSLASAESRLRLHLRPWFA
Ga0307416_1006381903	3300032002	Rhizosphere	MGSVNWRKRGNRYQIAWRLDDGTQGAKTVATKDEALDLVAEKRLEMRRSTWQGRRRGRLPFSQWADEWWAV
Ga0307416_1013343141	3300032002	Rhizosphere	MGSVSWRRRGNRYLVSWRLDDGTQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQSGRLSFGQWADDWWEVWAADPDRSPTTLAAT
Ga0307416_1015275962	3300032002	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGRRSGRLSFGQWAEDWWEVWAADPDRSPTTLAAT
Ga0307416_1028048151	3300032002	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLAFSA
Ga0307416_1038100541	3300032002	Rhizosphere	MGSVNWRKRGNRYQVAWRLDDGTQGAKTVATKDEALDLVAEKRLEISRSTWQGRRRGRLPFSKWADEWWGVWSSDPSRSPTTLAATE
Ga0307414_104745131	3300032004	Rhizosphere	MGSVNWRKRGHRYLVSWRMDDGSQGGKTVDTPDEARDLAAEKRLEMRRGSWRGRQRGRLAFNAWAAEWWETWAADDPSPTTLAA
Ga0307414_122916551	3300032004	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGHQRGRLSFNAWATEWWETWVADDPSLTSLASAE
Ga0307411_119770361	3300032005	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGSWRGRQRGRLSFSAWATEW
Ga0307415_1007159641	3300032126	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRHSFSQWADDWWEVWAADPDRSPTTLAATENRLRRHVRP
Ga0247829_111792421	3300033550	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRCGTWRGRQRGRLSFNAWAAEWWDTWAADDPSPTTLASAESWLRLHVRPWFADRPIDKI
Ga0247829_112071472	3300033550	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSAGEARDLAAEKRLELRRGTWQGRRRGRLPFNRWADEWW
Ga0247829_117565681	3300033550	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLTAEKRLEMRRGTWRGRQRGQLAFSAWAAEWWET
Ga0247830_110442291	3300033551	Soil	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEMSHNTWQGRRRGRLPFSRWADEWWA
Ga0364945_0172236_461_655	3300034115	Sediment	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLSFNAWT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078362

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences