Metagenome / Metatranscriptome Family F078361

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Overview

Basic Information
Family ID	F078361
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	102 residues
Representative Sequence	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQSAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Number of Associated Samples	99
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.86 %
% of genes near scaffold ends (potentially truncated)	26.72 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.655 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (11.207 % of family members)
Environment Ontology (ENVO)	Unclassified (43.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (30.172 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.11% β-sheet: 0.00% Coil/Unstructured: 30.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01594	AI-2E_transport	22.41
PF07332	Phage_holin_3_6	11.21
PF00691	OmpA	7.76
PF04120	Iron_permease	6.90
PF00582	Usp	1.72
PF11839	Alanine_zipper	1.72
PF13545	HTH_Crp_2	0.86
PF13519	VWA_2	0.86
PF04366	Ysc84	0.86
PF11821	ActD	0.86
PF07859	Abhydrolase_3	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	22.41
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.86
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.86 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	15.52 %
Unclassified	root	N/A	10.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.10 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	15.52 %
Unclassified	root	N/A	10.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.10 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	15.52 %
Unclassified	root	N/A	10.34 %
Maricaulales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales	0.86 %
Tissierellia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia	0.86 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.10 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	15.52 %
Unclassified	root	N/A	10.34 %
Maricaulaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae	0.86 %
Tissierellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales	0.86 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.10 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	15.52 %
Unclassified	root	N/A	10.34 %
Peptoniphilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae	0.86 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.86 %
Oceanicaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.10 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	15.52 %
Unclassified	root	N/A	10.34 %
unclassified Oceanicaulis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis	0.86 %
Helcococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Helcococcus	0.86 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.10 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	15.52 %
Unclassified	root	N/A	10.34 %
Oceanicaulis sp. HL-87	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp. HL-87	0.86 %
Helcococcus kunzii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Helcococcus → Helcococcus kunzii	0.86 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17156002	All Organisms → cellular organisms → Bacteria	3218	Open in IMG/M
2140918008\|ConsensusfromContig82784	Not Available	728	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100591839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1734	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101828378	All Organisms → cellular organisms → Bacteria	3050	Open in IMG/M
3300001213\|JGIcombinedJ13530_100289896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300001213\|JGIcombinedJ13530_107921583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300004480\|Ga0062592_101504098	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005294\|Ga0065705_10858228	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005444\|Ga0070694_101252576	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	623	Open in IMG/M
3300005459\|Ga0068867_101353995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300005544\|Ga0070686_101177533	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005577\|Ga0068857_102381441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Helcococcus → Helcococcus kunzii	520	Open in IMG/M
3300005719\|Ga0068861_100919348	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005836\|Ga0074470_11528224	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300005844\|Ga0068862_100059448	All Organisms → cellular organisms → Bacteria	3283	Open in IMG/M
3300006844\|Ga0075428_100390678	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300006845\|Ga0075421_101528632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300006852\|Ga0075433_10005384	All Organisms → cellular organisms → Bacteria	10054	Open in IMG/M
3300006852\|Ga0075433_11613612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300006881\|Ga0068865_101484673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp. HL-87	607	Open in IMG/M
3300006904\|Ga0075424_100648102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300009078\|Ga0105106_10351616	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300009091\|Ga0102851_11261237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300009100\|Ga0075418_10050659	All Organisms → cellular organisms → Bacteria	4454	Open in IMG/M
3300009111\|Ga0115026_11943026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300009156\|Ga0111538_10028088	All Organisms → cellular organisms → Bacteria → Proteobacteria	7317	Open in IMG/M
3300009162\|Ga0075423_10212654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2027	Open in IMG/M
3300009167\|Ga0113563_11039448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300009167\|Ga0113563_11256843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300009176\|Ga0105242_10748407	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	962	Open in IMG/M
3300009553\|Ga0105249_10473965	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1294	Open in IMG/M
3300009553\|Ga0105249_13052872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300010144\|Ga0115593_1016669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300010399\|Ga0134127_11660608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300010403\|Ga0134123_10249444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1544	Open in IMG/M
3300010403\|Ga0134123_10750631	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	962	Open in IMG/M
3300011405\|Ga0137340_1055492	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	759	Open in IMG/M
3300011409\|Ga0137323_1045581	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	965	Open in IMG/M
3300011430\|Ga0137423_1006776	All Organisms → cellular organisms → Bacteria	3646	Open in IMG/M
3300011435\|Ga0137426_1059241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300011441\|Ga0137452_1223194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300012039\|Ga0137421_1029383	All Organisms → cellular organisms → Bacteria → Acidobacteria	1409	Open in IMG/M
3300012173\|Ga0137327_1088443	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012232\|Ga0137435_1095572	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	892	Open in IMG/M
3300012905\|Ga0157296_10098620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300012922\|Ga0137394_10557968	Not Available	971	Open in IMG/M
3300012961\|Ga0164302_11678524	Not Available	531	Open in IMG/M
3300013096\|Ga0157307_1038531	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	857	Open in IMG/M
3300013306\|Ga0163162_10706707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1129	Open in IMG/M
3300013308\|Ga0157375_10872473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300014307\|Ga0075304_1130592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300014326\|Ga0157380_10283294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1518	Open in IMG/M
3300014876\|Ga0180064_1140035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300014884\|Ga0180104_1129362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300014885\|Ga0180063_1238161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300015257\|Ga0180067_1091612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300015371\|Ga0132258_10961276	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2158	Open in IMG/M
3300015374\|Ga0132255_100351432	All Organisms → cellular organisms → Bacteria → Acidobacteria	2135	Open in IMG/M
3300015374\|Ga0132255_104619192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300018031\|Ga0184634_10495161	Not Available	546	Open in IMG/M
3300018053\|Ga0184626_10183825	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	888	Open in IMG/M
3300018078\|Ga0184612_10233616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300018083\|Ga0184628_10018889	All Organisms → cellular organisms → Bacteria	3381	Open in IMG/M
3300018084\|Ga0184629_10096489	All Organisms → cellular organisms → Bacteria → Acidobacteria	1440	Open in IMG/M
3300018084\|Ga0184629_10488187	Not Available	643	Open in IMG/M
3300018084\|Ga0184629_10627947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300018469\|Ga0190270_10229310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1596	Open in IMG/M
3300019238\|Ga0180112_1079133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300019263\|Ga0184647_1274685	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	715	Open in IMG/M
3300019458\|Ga0187892_10013772	All Organisms → cellular organisms → Bacteria	9230	Open in IMG/M
3300020063\|Ga0180118_1156495	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300020066\|Ga0180108_1021009	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300020067\|Ga0180109_1216745	All Organisms → cellular organisms → Bacteria → Acidobacteria	1281	Open in IMG/M
3300020186\|Ga0163153_10053171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2736	Open in IMG/M
3300020195\|Ga0163150_10000595	All Organisms → cellular organisms → Bacteria	66666	Open in IMG/M
3300021081\|Ga0210379_10313760	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	687	Open in IMG/M
3300021082\|Ga0210380_10117000	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1185	Open in IMG/M
3300021090\|Ga0210377_10526948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300022185\|Ga0079039_1075222	Not Available	596	Open in IMG/M
3300022185\|Ga0079039_1332469	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300022185\|Ga0079039_1635766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300025313\|Ga0209431_11036758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300025322\|Ga0209641_10400408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300025938\|Ga0207704_11184795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300025961\|Ga0207712_10612827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300026089\|Ga0207648_10361650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1309	Open in IMG/M
3300026118\|Ga0207675_101315125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300027533\|Ga0208185_1148018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300027880\|Ga0209481_10183818	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1041	Open in IMG/M
3300027907\|Ga0207428_10144606	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300028380\|Ga0268265_10140922	All Organisms → cellular organisms → Bacteria → Acidobacteria	2019	Open in IMG/M
3300028381\|Ga0268264_12029375	Not Available	584	Open in IMG/M
3300031562\|Ga0310886_10036620	All Organisms → cellular organisms → Bacteria → Acidobacteria	2119	Open in IMG/M
3300031740\|Ga0307468_100309339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300031854\|Ga0310904_10208881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300031854\|Ga0310904_10400821	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	898	Open in IMG/M
3300031892\|Ga0310893_10099420	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1065	Open in IMG/M
3300031940\|Ga0310901_10032057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1614	Open in IMG/M
3300031944\|Ga0310884_10173634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300031944\|Ga0310884_10886424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300032013\|Ga0310906_11331228	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	525	Open in IMG/M
3300032017\|Ga0310899_10368243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300032075\|Ga0310890_10986804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300032122\|Ga0310895_10323600	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	736	Open in IMG/M
3300032180\|Ga0307471_102510446	Not Available	652	Open in IMG/M
3300033408\|Ga0316605_10661284	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300033408\|Ga0316605_10721653	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300033408\|Ga0316605_10858646	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300033413\|Ga0316603_10569203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300033419\|Ga0316601_100222238	Not Available	1675	Open in IMG/M
3300033419\|Ga0316601_101020574	Not Available	826	Open in IMG/M
3300033419\|Ga0316601_101961206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300033480\|Ga0316620_12605792	Not Available	503	Open in IMG/M
3300033482\|Ga0316627_100549711	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300033521\|Ga0316616_103265337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300034149\|Ga0364929_0337344	Not Available	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.14%
Host-Associated	Host-Associated	25.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	37.93%
Aquatic	Environmental → Aquatic	36.21%
Plants	Host-Associated → Plants	25.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.21%
Sediment	Environmental → Aquatic → Sediment	18.10%
Freshwater	Environmental → Aquatic → Freshwater	16.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.07%
Marine	Environmental → Aquatic → Marine	1.72%
Cave	Environmental → Terrestrial → Cave	0.86%
Floodplain	Environmental → Terrestrial → Floodplain	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	9.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.17%
Loam	Environmental → Terrestrial → Soil → Loam	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.59%
Lake	Environmental → Aquatic → Freshwater → Lake	1.72%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	9.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.72%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.62%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	6.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.03%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.59%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.72%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.72%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.86%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010144	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014307	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02678230	2088090014	Soil	MDNFSGDEGERFGKRAAEKIGSAVEVAGQKLDAAVDYVESTKQSAKQTLDQVRQEGWQGTKARMLEYTRKDPFNALLMAVGAGLLLGLLTKRARG
Bog_all_C_05296670	2140918008	Soil	MEDSIGNETERFGKRAAEKIGDAAEVAGQKLDAAVDYVESTKQNAKQTLDQMRRDGWNGIKEKMLEYTRTEPFNALVIAAGIGLLLGWLTKRSRG
INPhiseqgaiiFebDRAFT_1005918392	3300000364	Soil	VEXINASEXERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQNAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
INPhiseqgaiiFebDRAFT_1018283786	3300000364	Soil	MDNFSGDEGERFGKRAAEKIGSAVEVAGQKLDAAVDYVESTKQSAKQTLDQVRQEGWQGTKARMLEYTRKDPFNALLMAVGAGLLLGLLTKRARG*
JGIcombinedJ13530_1002898962	3300001213	Wetland	MESINASEGERIGKRTAEKIADAAGVAGQKLDAVVDYVESTRQCAKQTFDQVRQEGWKGVKGKVLEYTRNEPLNALLVAVGAGLFCGWFARRIRG*
JGIcombinedJ13530_1079215832	3300001213	Wetland	MENFNANEGERFGQRTAEKIAVAAKATGQKLDAAVDYVESTRQSARQTLDQVRQDGWKGMKGRILEYTRNEPFNALLIAVGAGLFFGWLAKKTRG*
Ga0062592_1015040982	3300004480	Soil	GNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNAVVIAVSAGVFFGWLATRPRE*
Ga0065705_108582282	3300005294	Switchgrass Rhizosphere	CFMHWSPRSPLGGLVLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQNAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0070694_1012525761	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	FGKRAAEKIAGAAAATGQKLDAAVDYVESAKQSAKQTMDQVRQEGWKGMKSRVLEYTRHEPLSALVIAVGAGVFFGWLATRPRA*
Ga0068867_1013539952	3300005459	Miscanthus Rhizosphere	VLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0070686_1011775331	3300005544	Switchgrass Rhizosphere	LVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRHRE*
Ga0068857_1023814411	3300005577	Corn Rhizosphere	VLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIA
Ga0068861_1009193481	3300005719	Switchgrass Rhizosphere	VENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0074470_115282242	3300005836	Sediment (Intertidal)	MENFNASEGEGIGKRAAEKIAAAAEVAGHKLDAAVDYVESAKQSAKQTLDQVRQEGWKGVRGKILEYTRTEPFNALLIALGTGLLLGFLTKK
Ga0068862_1000594484	3300005844	Switchgrass Rhizosphere	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0075428_1003906782	3300006844	Populus Rhizosphere	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNALVIAVSAGVFFGWLATRPRE*
Ga0075421_1015286322	3300006845	Populus Rhizosphere	VLHRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQSAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0075433_100053845	3300006852	Populus Rhizosphere	MDNFSGNEGERFGKRAAEKIGSAVEVAGQKLDAAVDYVESTKQSAKQTLDQVRQEGWQGTKARMLEYTRKDPFNALLMAVGAGLLLGLLTKRARG*
Ga0075433_116136122	3300006852	Populus Rhizosphere	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNALVIAVGAGVFFGWLAT
Ga0068865_1014846731	3300006881	Miscanthus Rhizosphere	VLCRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0075424_1006481022	3300006904	Populus Rhizosphere	MDNFSGNEGERFGKRAAEKIGSAVEVAGQKLDAAVDYVESTKQSAKQTLDQVRQEGWQGAKARMLEYTRKDPFNALLMAVGAGLLLGLLTKRARG*
Ga0105106_103516162	3300009078	Freshwater Sediment	MENFDESESERFGKRAAKQIGIAADVAGQKLDVAVDYLESSRQRAKQTLDNVRQDGWKGMKETVREYTRTDPFAALLIAAGAGLILGWLTKKTRGQAHDYRD*
Ga0102851_112612371	3300009091	Freshwater Wetlands	MENPGEKESERFGKRAAEIIGSAVDVAGQKFDAAVDYVESTRQSVQQTVDRVRQGGWKGMKERVMEYARTEPFNALLIAVGTGLVLGWLTKKTRR*
Ga0075418_100506597	3300009100	Populus Rhizosphere	INASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVFEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0115026_119430261	3300009111	Wetland	MENFGENENERFGKRTAKQIGIAADVAGQKLDAAVDYVESTRQRAKQTLDNVRQDGWKGMKEKVVEYTRTNPFAALLIAAGAGLILGWLTKKTRR*
Ga0111538_100280884	3300009156	Populus Rhizosphere	VLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNALVIAVSAGVFFGWLATRPRE*
Ga0075423_102126542	3300009162	Populus Rhizosphere	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0113563_110394481	3300009167	Freshwater Wetlands	METKATTMEHSGEKESERFGKRAAENIGSAVDGAGQKFDAAVDYVESTKQSVQQTLDSVRQGGWKGMTERVMEYTRTKPFNALLIAVGTGLALGLLTKRTRG*
Ga0113563_112568431	3300009167	Freshwater Wetlands	MENFDESESERFGKRAAKQIGIAADVAGQKLDAAVDYVESTRQSAKQTLDNVRQDGWKGMKEKVMEYTRTDPFAALLIAAGAGLILGWLTKKTRG*
Ga0105242_107484071	3300009176	Miscanthus Rhizosphere	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESTKQSAKQALDQVHQEGWKGLKGRVFEYTRHEPLSALVIAVGAGVFFGWLATRPRD*
Ga0105249_104739652	3300009553	Switchgrass Rhizosphere	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESTKQSAKQALDQVHQEGWKGLKGRVFEYTRHEPLSALVIAVGAGVFFGWLATRPRE*
Ga0105249_130528722	3300009553	Switchgrass Rhizosphere	FMHWSSRSPLGGLVLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0115593_10166691	3300010144	Wetland	MENFNASEGDRFGKRVAEKIAGAAEATGQKLDAAVDYVESTKQCAKQTIDRVRQEGWKGMKGKILEYTRNEPFNALLIAVGAGLFFGWLTKRTKR*
Ga0134127_116606081	3300010399	Terrestrial Soil	VLHRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0134123_102494442	3300010403	Terrestrial Soil	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQSAKQTIDQVRQEGWKGMKSRVLEYTRHEPLSALVIAVGAGVFFGWLATRPRA*
Ga0134123_107506311	3300010403	Terrestrial Soil	SERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGTGVFFGWLATRPRE*
Ga0137340_10554922	3300011405	Soil	KRAAEKIAGAAAATGQKLDAAVDYVETAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVVAVGAGVFFGWLATRPRE*
Ga0137323_10455812	3300011409	Soil	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVVAVGAGVFFGWLATRPRE*
Ga0137423_10067763	3300011430	Soil	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQNAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVVAVGAGVFFGWLATRPRE*
Ga0137426_10592412	3300011435	Soil	VENINPSEGERFGKRTAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVVAVGAGVFFGWLATRPRE*
Ga0137452_12231941	3300011441	Soil	VENINVSGDERFGKRTAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALAIAVGTGVFFGWLATRPRE*
Ga0137421_10293832	3300012039	Soil	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVVAVGAGVFFGWLATRPRE*
Ga0137327_10884432	3300012173	Soil	VENINVSADERFGKRTAEKIAGAAEVTGQKLDAAVDYVESAKQNAKQTLDQVRHEGWNGMKGKLFEYTRKEPFNALVIAAAAGVFFGWLTTRTRG*
Ga0137435_10955722	3300012232	Soil	RAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALAIAVGTGVFFGWLATRPRE*
Ga0157296_100986201	3300012905	Soil	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNALVIA
Ga0137394_105579682	3300012922	Vadose Zone Soil	MENFSRNESERLGKRAAEKIAGAAEVAGQKLDAAIDYVESTKQSAKQTLDQVCQDGWPGTKAKVMEYTRKEPLNALLIAVGTGLLLGLLTKRARG*
Ga0164302_116785241	3300012961	Soil	VLHRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESTKQSAKQALDQVHQEGWKGLKGRVFEYTRHEPLSALVIAVGAGVFFGWLATRPRD*
Ga0157307_10385312	3300013096	Soil	VENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVSAGVFFGWLATRPRE*
Ga0163162_107067072	3300013306	Switchgrass Rhizosphere	MHWSSRSPLGGLVLYHLDNLVRLKKGKAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRHRE*
Ga0157375_108724731	3300013308	Miscanthus Rhizosphere	VENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLAIRPRA*
Ga0075304_11305921	3300014307	Natural And Restored Wetlands	MENFNASEGEGIGKRAAEKIAAAAEVAGHKLDAAVDYVESAKQSAKQTLDQARQEGWKGMRGKILEYTRTEPFNALLIALGTGLLLGLLTKKTRG*
Ga0157380_102832941	3300014326	Switchgrass Rhizosphere	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAG
Ga0180064_11400351	3300014876	Soil	VLRRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVETTKQSAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0180104_11293622	3300014884	Soil	VLHRLDNLVRLKKGKAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0180063_12381611	3300014885	Soil	VENINPSEGERFGKRTAEKIAGAAEVTGQKLDAAVDYVESAKQNAKQALDQVRQEGWKGMKGKISEYTRKEPFNALVIAAAAGVFFGWLTTRTRG*
Ga0180067_10916121	3300015257	Soil	VENINPSEGERFGKRTAEKIAGVAEATGQKLDAAVDYVESTKQSAKQTLDQVRQEGWKGMKGNIVEYTRKEPFNALVIAAAAGVFFGWITTRTRG
Ga0132258_109612764	3300015371	Arabidopsis Rhizosphere	RLKKGNAVENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESTKQSAKQALDQVHQEGWKGLKGRVFEYARHEPLSALVIAVGAGVFFGWLATRPRD*
Ga0132255_1003514322	3300015374	Arabidopsis Rhizosphere	VLHRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESTKQSAKQALDQVHQEGWKGLKGRVFEYARHEPLSALVIAVGAGVFFGWLATRPRD*
Ga0132255_1046191922	3300015374	Arabidopsis Rhizosphere	VLHRLDNLVRLKKGNGVENINASENERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQNAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE*
Ga0184634_104951611	3300018031	Groundwater Sediment	VENINASEGERFGKRVADKIAGAAEATGQQLDAAVDYVESAKQSAKQTLDQVRQEGWKGMKGKIFEYTRNEPLSALVIAAGAGVFFGWLTTRTRG
Ga0184626_101838251	3300018053	Groundwater Sediment	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQSAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALLIAVGAGVFFGWLATRPRDIE
Ga0184612_102336162	3300018078	Groundwater Sediment	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQSAKQTLDQVRQEGWNGMKGKILGYTRNEPFNALLIAVGAGVFFGWLTTRPRE
Ga0184628_100188895	3300018083	Groundwater Sediment	VENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVETAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0184629_100964892	3300018084	Groundwater Sediment	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQSAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0184629_104881871	3300018084	Groundwater Sediment	MENINATEGERFGKRAAERIAGAAEATGQKLDAAVDYVENAKQSAQQTLDQVRREGWKGMKGKIFEFTRNEPLSALVIAAVAGVFFGWLTTRTRA
Ga0184629_106279471	3300018084	Groundwater Sediment	MMAAAALWSSASSLGDLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALAIAVGTGVFFVWLATRPRE
Ga0190270_102293102	3300018469	Soil	VENINASESERFGKRAAEKIAGAAGATGQKLDAAVDYVESAKQSAKQTLDQVRQEGWKGMNGRVLEYTRHEPFNALVIAVGAGVFFGWLATKPRA
Ga0180112_10791332	3300019238	Groundwater Sediment	MENTNVSADERFGKRTAEKIAGAAEVTGQKLDAAVDYVESAKQNAKQALDQVRQEGWKGMKGKIFEYTRKEPFNALVIAAGAGVFFGWLTTRTRG
Ga0184647_12746852	3300019263	Groundwater Sediment	LWSSASSSGDLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVETAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0187892_100137722	3300019458	Bio-Ooze	VENINASEGERFGKRAAEKIAGAAEATGQKLDAAVDYVESTKQSAKQALDQVRQEGWKGMKGRILEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0180118_11564951	3300020063	Groundwater Sediment	MENINVSADERFGKRAADKVAGVAEVTGQKLDAAVDYVESVKQSAKQTIDQVRQEGWKGMKGKIFEYTRKEPFNALVIAAGAGVFFGWLTTRTRG
Ga0180108_10210092	3300020066	Groundwater Sediment	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQNAKQTLDQVRQEGWKGVKGKIFEYTRKEPFNALVIAAGAGVFFGWLTTRTRG
Ga0180109_12167451	3300020067	Groundwater Sediment	MENINVSADERFGKRAADKVAGVAEVTGQKLDAAVDYVESVKQSAKQTIDQVRQEGWKGMKGKIFEYTRKEPFNALVIAAGAGVFFGWITPGPEGRTSSSPVVGAEELWKVE
Ga0163153_100531715	3300020186	Freshwater Microbial Mat	MENFSGNESDQFGKRTADKIGVAVEVAGQKLDAAVDYVESTKQSAKQTLDQVRQDGWQGMKGKVMEYTRTDPVNALLVAVGSGLLLGWLTKRARG
Ga0163150_1000059553	3300020195	Freshwater Microbial Mat	MENINASEGERFGKRAAERIAGAAEATGQKLDAAVDYVESAKQSAKQTLDQVRQEGWKGMKGKIFEFTRNEPLSALVIAAGAGVFFGWLTTRTRG
Ga0210379_103137601	3300021081	Groundwater Sediment	LKKGNAVENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQSAKQTLDQVRQEGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0210380_101170002	3300021082	Groundwater Sediment	MMAAAVLWSSASSSGDLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0210377_105269481	3300021090	Groundwater Sediment	MKNFNAKEGERFGKRAADKIGLAAEATGQKLDAAVDYVESTKQSAKQTLDQLRQEEWKGMKGKILEYTRNEPFNALLIAVGAGLFFGWLTKRTRGLSNWDVPTTN
Ga0079039_10752221	3300022185	Freshwater Wetlands	FLLRWISIKETTMQNLDGIESERFGKRAAERIGNAADAAGQKLDAAVDYVESTRQSAKQTLNSVRQNGWKGMKEKVMEYTRTDPLAALLIAAGAGLILGLLTKKTRR
Ga0079039_13324692	3300022185	Freshwater Wetlands	MENLNESESERLGKRAAKQIGIAADVAGQKLDAAVDYVENTRQRAKQTLDNVRQDGWKGMKEKVMEYTRTDPFAALLIAASAGLILGWLTKKTRR
Ga0079039_16357661	3300022185	Freshwater Wetlands	MEHSGEKESERFGKRAAENIGSAVDGAGQKFDAAVDYVESTKQSVQQTLDSVRQGGWKGMTERVMEYTRTKPFNALLIAVGTGLALGLLTKRTRG
Ga0209431_110367582	3300025313	Soil	MENFNASEGERFGKRVAEKIAGAAEATGQKLDAAVDYVESTKQSAKQTLDQVRQEGWKGMKGKIFEYTRKEPFNALVIAAGAGVFFGWLTTRTRG
Ga0209641_104004081	3300025322	Soil	MENFNASEGERFGKRVAEKIAGAAEATGQKLDAAVDYVESTKQSAKQTLDQVRQEGWKGMKGKILEYTRNEPFNALLIAVGAGLFFGWLTKRTRR
Ga0207704_111847951	3300025938	Miscanthus Rhizosphere	VLCRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0207712_106128272	3300025961	Switchgrass Rhizosphere	VENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0207648_103616502	3300026089	Miscanthus Rhizosphere	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0207675_1013151252	3300026118	Switchgrass Rhizosphere	MTAAALWSGASSSGDLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVETAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0208185_11480181	3300027533	Soil	VLMSGGLSLAIAFDSGLMMAAAVLWSSASSSGDLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVVAVGAGVFFGWLATRPRE
Ga0209481_101838181	3300027880	Populus Rhizosphere	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNALVIAVSAGVFFGWLATRPRE
Ga0207428_101446063	3300027907	Populus Rhizosphere	SAGSGCCFMHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNALVIAVSAGVFFGWLATRPRE
Ga0268265_101409222	3300028380	Switchgrass Rhizosphere	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLDYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0268264_120293751	3300028381	Switchgrass Rhizosphere	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESAKQSAKQTMDQVRQEGWKGMKSRVLEYTRHEPLSALVIAVGAGVFFGWLATRPRE
Ga0310886_100366202	3300031562	Soil	VENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0307468_1003093392	3300031740	Hardwood Forest Soil	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVEIAKQIAKQTMNQVREQGWKGMKGKIFEYTRKEPFNALVIAAGAGVFFGWLATRPRE
Ga0310904_102088812	3300031854	Soil	MHWSSRSPLGGLVLYRLDNLDRFKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0310904_104008211	3300031854	Soil	SGSCFMHWSSRSPLGGLVLYRLDNLVRLKKGNAVESINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0310893_100994202	3300031892	Soil	DLVSCRSSRSPLGGLVLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0310901_100320572	3300031940	Soil	MHWSSRSPLGGLVLYRLDNLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRE
Ga0310884_101736341	3300031944	Soil	MHWSSRSPLGGLVLYRLDNLDRFKKGNAVENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWL
Ga0310884_108864242	3300031944	Soil	CGDLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRD
Ga0310906_113312281	3300032013	Soil	KIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLAIRPRA
Ga0310899_103682431	3300032017	Soil	VENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLATRPRD
Ga0310890_109868042	3300032075	Soil	VENINASESERFGKRAAEKIAGVAEATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAVGAGVFFGWLAIRPRA
Ga0310895_103236001	3300032122	Soil	GKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQDGWKGMKGRVLEYTRHEPFNALVIAAGAGVFFGWLATRPRD
Ga0307471_1025104462	3300032180	Hardwood Forest Soil	VENINASESERFGKRAAEKIAGAAEATGQKLDAAVDYVESTKQSAKQALDQVHQEGWKGLKGRVFEYTRHEPLSALVIAVGAGVFFGWLATRPRD
Ga0316605_106612841	3300033408	Soil	MENFDESESERFGKRAAKQIGIAADVAGQKLDAAVDYVESTRQRAKQTLDNVRQDGWKGMKEKVVEYTRTNPFAALLIAAGAGLILGWLTKKTRR
Ga0316605_107216531	3300033408	Soil	MENFGENENERFGKRTAKQIGIAADVAGQKLDAAVDYVESTRQSAKQTLDSVRQGGWKGMKEKVMEYTRTDPFAALLIAAGAGLILGWLTKKTRG
Ga0316605_108586462	3300033408	Soil	MDNLGEKENERFGKRAAENMGNAVDVAGQKLDAAVDYVESTKQSAKQTIDRVRQEGWKGMKGKILEYTRNEPFNALLIAVGAGLFFGWLTKRTKR
Ga0316603_105692033	3300033413	Soil	MEHSGEKEGERFGKRAAENIGSAVDGAGQKFDAAVDYVESTKQSVQQTLDSVRQGGWKGMTERVMEYTRTKPFNALLIAVGTGLALGLLTKRTRG
Ga0316601_1002222384	3300033419	Soil	MDNLNESESERLGKRAAKQIGIAADVAGQKLDAAVDYVESTRQRAKQTLDNVRQDGWKGMKEKVMEYTRTNPFAALLIAASAGLILGWLTRKTRG
Ga0316601_1010205742	3300033419	Soil	MDILVENESERFGKRAADKICGAVDMAGQKLDAAVDYVESTKQSAKQTLEQVREDGWKGMKDKVITYTRTEPLSALLIAAGTGLIVGYLTKRARGQARG
Ga0316601_1019612061	3300033419	Soil	MENFNASEGDRFGKRVAEKIAGAAEATGQKLDAAVDYVESTKQSAKQTIDRVRQEGWKGMKGKILEYTRNEPFNALLIAVGAGLFFGWLTKRTKR
Ga0316620_126057922	3300033480	Soil	MENPGEKESERFGKRAAENIGSAVDGAGQKLDAAVDYVESTKQSVQQTLDSVRQGGWKGMKERVTEYTRTKPFNALLFAVGTGLVLGWLTKKTRR
Ga0316627_1005497112	3300033482	Soil	MDTLGLTESERFGKRTAETIGNAVDAAGQKLDAAVDYVESTKQRAKETLDTVRQGGWVGMKERVIKYTRTDPVTALLVAVGTGLM
Ga0316616_1032653371	3300033521	Soil	MENFDESESERFGKRAAKQIGIAADVAGQKLDAAVDYVESTRQRAKQTLDNVRQDGWKGMKEKVVEYTRTDPFAALLIAAGAGLILGWLTKKTRG
Ga0364929_0337344_11_337	3300034149	Sediment	MMAAAVLWSSASSSGDLVRLKKGNAVENINASESERFGKRAAEKIAGAAAATGQKLDAAVDYVESAKQNAKQTLDQVRQGEWKGMKGRVLEYTRHEPYQAIRANRAAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078361

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences