Metagenome Family F078357

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078357
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	64 residues
Representative Sequence	RRSYEDFLRSGFATDVKADFRDWNIIVIYLRRYHDRQLQQAAHIDFWQRYFHEAGGKITRWAGVD
Number of Associated Samples	99
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.86 %
% of genes near scaffold ends (potentially truncated)	98.28 %
% of genes from short scaffolds (< 2000 bps)	89.66 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.103 % of family members)
Environment Ontology (ENVO)	Unclassified (18.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.931 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.26% β-sheet: 16.13% Coil/Unstructured: 51.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF07978	NIPSNAP	1.72
PF07331	TctB	0.86
PF01040	UbiA	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	90.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.48 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	90.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	90.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	90.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	90.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1040775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	861	Open in IMG/M
3300000955\|JGI1027J12803_100059552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	978	Open in IMG/M
3300000955\|JGI1027J12803_102818638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1068	Open in IMG/M
3300001661\|JGI12053J15887_10522570	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300004156\|Ga0062589_101712349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300005171\|Ga0066677_10164166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1224	Open in IMG/M
3300005174\|Ga0066680_10956398	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300005181\|Ga0066678_10242897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1162	Open in IMG/M
3300005184\|Ga0066671_10114399	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1519	Open in IMG/M
3300005332\|Ga0066388_100225348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2505	Open in IMG/M
3300005332\|Ga0066388_102362442	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	963	Open in IMG/M
3300005347\|Ga0070668_100087599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2450	Open in IMG/M
3300005440\|Ga0070705_101303125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	602	Open in IMG/M
3300005451\|Ga0066681_10523220	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300005459\|Ga0068867_100842297	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300005545\|Ga0070695_101156287	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300005546\|Ga0070696_100434590	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1033	Open in IMG/M
3300005564\|Ga0070664_100535408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1082	Open in IMG/M
3300005713\|Ga0066905_100808494	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	814	Open in IMG/M
3300005719\|Ga0068861_102601191	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300005844\|Ga0068862_101479782	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300006049\|Ga0075417_10016067	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2906	Open in IMG/M
3300006049\|Ga0075417_10023574	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2480	Open in IMG/M
3300006049\|Ga0075417_10367807	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300006058\|Ga0075432_10342152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300006844\|Ga0075428_101149044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	819	Open in IMG/M
3300006845\|Ga0075421_100144610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2974	Open in IMG/M
3300006845\|Ga0075421_100725181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1153	Open in IMG/M
3300006846\|Ga0075430_100582632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	923	Open in IMG/M
3300006854\|Ga0075425_101603601	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	733	Open in IMG/M
3300006854\|Ga0075425_102227511	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300006854\|Ga0075425_102502757	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300006871\|Ga0075434_100243218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1819	Open in IMG/M
3300006871\|Ga0075434_102333561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300006881\|Ga0068865_101609114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300006914\|Ga0075436_100467313	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300006918\|Ga0079216_10852730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300006969\|Ga0075419_10064793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2308	Open in IMG/M
3300009012\|Ga0066710_100191234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2902	Open in IMG/M
3300009012\|Ga0066710_101496671	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1042	Open in IMG/M
3300009100\|Ga0075418_10796829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1020	Open in IMG/M
3300009137\|Ga0066709_100673804	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1484	Open in IMG/M
3300009137\|Ga0066709_103165058	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300009147\|Ga0114129_10855181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1156	Open in IMG/M
3300009148\|Ga0105243_11304553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	743	Open in IMG/M
3300009156\|Ga0111538_12119639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300009162\|Ga0075423_10549696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1216	Open in IMG/M
3300009553\|Ga0105249_10267940	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1700	Open in IMG/M
3300009808\|Ga0105071_1045638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	697	Open in IMG/M
3300009814\|Ga0105082_1033058	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	829	Open in IMG/M
3300009836\|Ga0105068_1097656	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300010047\|Ga0126382_12062584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300010047\|Ga0126382_12466520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300010321\|Ga0134067_10431063	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300010326\|Ga0134065_10491260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300010360\|Ga0126372_13105473	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300010362\|Ga0126377_11314627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	795	Open in IMG/M
3300010362\|Ga0126377_12197716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300010376\|Ga0126381_100396004	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1922	Open in IMG/M
3300010398\|Ga0126383_10177017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2022	Open in IMG/M
3300012211\|Ga0137377_10381162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1348	Open in IMG/M
3300012922\|Ga0137394_10181147	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1797	Open in IMG/M
3300012923\|Ga0137359_11011164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	713	Open in IMG/M
3300012948\|Ga0126375_10791096	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	750	Open in IMG/M
3300012948\|Ga0126375_11944801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300012971\|Ga0126369_10028224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4587	Open in IMG/M
3300012971\|Ga0126369_11704796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300014268\|Ga0075309_1052043	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	935	Open in IMG/M
3300015372\|Ga0132256_101178735	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	880	Open in IMG/M
3300015372\|Ga0132256_101890554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300015374\|Ga0132255_101746763	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	944	Open in IMG/M
3300016270\|Ga0182036_11141515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300016387\|Ga0182040_10535788	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	940	Open in IMG/M
3300016404\|Ga0182037_11673070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300017944\|Ga0187786_10061376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1165	Open in IMG/M
3300018031\|Ga0184634_10161337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1010	Open in IMG/M
3300018064\|Ga0187773_10058998	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1791	Open in IMG/M
3300018431\|Ga0066655_10100170	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1622	Open in IMG/M
3300018468\|Ga0066662_10842630	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	894	Open in IMG/M
3300019789\|Ga0137408_1293802	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1917	Open in IMG/M
3300025792\|Ga0210143_1022771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1092	Open in IMG/M
3300025930\|Ga0207701_10261964	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1507	Open in IMG/M
3300025961\|Ga0207712_10730608	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300025972\|Ga0207668_10220265	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1523	Open in IMG/M
3300026067\|Ga0207678_11000730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	740	Open in IMG/M
3300026310\|Ga0209239_1129947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1033	Open in IMG/M
3300026315\|Ga0209686_1064457	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1313	Open in IMG/M
3300026342\|Ga0209057_1197387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300026524\|Ga0209690_1029160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2673	Open in IMG/M
3300027013\|Ga0209884_1036709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300027614\|Ga0209970_1067392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300027873\|Ga0209814_10475299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300027880\|Ga0209481_10009578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4149	Open in IMG/M
3300031170\|Ga0307498_10046923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1151	Open in IMG/M
3300031199\|Ga0307495_10161445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300031679\|Ga0318561_10368089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	789	Open in IMG/M
3300031681\|Ga0318572_10226653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1096	Open in IMG/M
3300031720\|Ga0307469_10026537	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3272	Open in IMG/M
3300031720\|Ga0307469_11531293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300031720\|Ga0307469_12471392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300031748\|Ga0318492_10581279	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300031781\|Ga0318547_10163121	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1317	Open in IMG/M
3300031821\|Ga0318567_10410814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	767	Open in IMG/M
3300031845\|Ga0318511_10120827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1128	Open in IMG/M
3300031879\|Ga0306919_10749935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	751	Open in IMG/M
3300031880\|Ga0318544_10435997	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300031894\|Ga0318522_10306333	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	602	Open in IMG/M
3300031945\|Ga0310913_10580588	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	795	Open in IMG/M
3300032035\|Ga0310911_10523238	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	688	Open in IMG/M
3300032041\|Ga0318549_10222154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300032180\|Ga0307471_101248314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	906	Open in IMG/M
3300032205\|Ga0307472_101224334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	718	Open in IMG/M
3300032261\|Ga0306920_102006244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	810	Open in IMG/M
3300033290\|Ga0318519_10579231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300033550\|Ga0247829_10387981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1146	Open in IMG/M
3300034818\|Ga0373950_0119218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.10%
Host-Associated	Host-Associated	31.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.38%
Plants	Host-Associated → Plants	31.90%
Aquatic	Environmental → Aquatic	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.17%
Marine	Environmental → Aquatic → Marine	0.86%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.69%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.31%
Sand	Environmental → Terrestrial → Soil → Sand	3.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.59%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.45%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10407751	2228664022	Soil	SDVKADFRDWSIIVIYLRRYRDRRFQEAAHLEFWQRYFHDSGGTIGRWAGVD
JGI1027J12803_1000595522	3300000955	Soil	RSYEDFLRSGFASDVKTDFRDWNIIVIYLRRYHDRRFQEAAHLEFWQQYFHDSGGTITRWAGVD*
JGI1027J12803_1028186382	3300000955	Soil	RSYEDFLRSGFASDVKADFRDWSIIVIYLRRYRDRRFQEAAHLEFWQRYFHDSGGTIGRWAGVD*
JGI12053J15887_105225701	3300001661	Forest Soil	RRGYDEFLRSGFATDVKADFRDWNIIVIYLRRYHDRQLQQAAHLDFWQRYFHEAGGKITRWAGVD*
Ga0062589_1017123492	3300004156	Soil	YADFVRSGFASDVKADFRDWNVVVIYLRRYRDRQLQQGAHVDFWQRYFHDAGAKITRWAGVD*
Ga0066677_101641661	3300005171	Soil	EDFVRSGFASDVKADFRGWNIVVIYLRRYRDRHLQQAAHLEFWERYFHAAGGKIVRWAGVD*
Ga0066680_109563981	3300005174	Soil	RSGFATDVKADFRDWNIIVIYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD*
Ga0066678_102428972	3300005181	Soil	ATDVKADFRDWNIIVIYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD*
Ga0066671_101143991	3300005184	Soil	ADFRGWNIVVIYLRRYRDRHLQQAAHLEFWERYFHAAGGKIVRWAGVD*
Ga0066388_1002253483	3300005332	Tropical Forest Soil	HYRDRNTYDDFVRSGFARDVQADFRDWNIIVIYLRRYRDRRLQQTAHVDFWQRYFHDAGGKITRWAGVD*
Ga0066388_1023624422	3300005332	Tropical Forest Soil	KADFRDWNIIVIYLRRYHDRRFQEAAHLEFWQQYFHDSGGTITRWAGVD*
Ga0070668_1000875993	3300005347	Switchgrass Rhizosphere	VRSGFATDVKADFRDWSVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAVD*
Ga0070705_1013031252	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DVKADFRDWNVIVIYLRRYHDRQLQQAAHIDFWQRYFHEAGAKIVRWAGVD*
Ga0066681_105232201	3300005451	Soil	GYEDFVRSGFASDVKADFRGWNIVVIYLRRYRDRHLQQAAHLEFWERYFHAAGGKIVRWAGVD*
Ga0068867_1008422972	3300005459	Miscanthus Rhizosphere	VKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAVD*
Ga0070695_1011562872	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ADWRDWSIVVLYLRRYRDRRLQQGAHVDFWQRYFHDAGGNITRWAGVD*
Ga0070696_1004345902	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLQNTAGFSHYRERRSYADFVQSGFASDVKADFRDWNVMVVYLRRYRDRQLQQGAHVDFWQRYFHDAGGNITRWAGVD*
Ga0070664_1005354082	3300005564	Corn Rhizosphere	GPRRGWQDFVRSGFANDVKADFRDWNVIVIYLRRYRDRQLQQAAHLDFWQRYFHEAGAKITRWAGVD*
Ga0066905_1008084941	3300005713	Tropical Forest Soil	SHYRARSSYDDFVASGFARDVQADFRGWDVIVIYLRRYRDRRLQQAGHVDFWQRYFHDTGAKITRWAGVD*
Ga0068861_1026011912	3300005719	Switchgrass Rhizosphere	HTAAFNHYGPRRTYDDFLRSGFATDVKADFRGWNIIVIYLRRYNDRQLQQAAHLEFWQRYFHDAGGKLVRWAGVD*
Ga0068862_1014797821	3300005844	Switchgrass Rhizosphere	VRSGFATDVKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAVD*
Ga0075417_100160671	3300006049	Populus Rhizosphere	GFATDVKADFRDWTIIVIYLRRYNDRQLQQAAHVDFWQRYFHEAGGKIVRWAGVD*
Ga0075417_100235743	3300006049	Populus Rhizosphere	QNTEGFSHYRDRNTYDDFVRSGFARDVQADFRDWNILVIYLRRYRDRRLQQTAHVDFWQRYFHDSGGKITRWAGVD*
Ga0075417_103678072	3300006049	Populus Rhizosphere	TEGFSHYRDRNTYDDFVRSGFARDVQADFRDWSIIVIYLRRYRDRRLQQTAHVDFWQRYFHDAGGKITRWAGVD*
Ga0075432_103421522	3300006058	Populus Rhizosphere	RRSYEDFLRSGFASDVKTDFRDWNIIVIYLRRYHDRRFQEAAHLEFWQQYFHDSGGTITRWAGVD*
Ga0075428_1011490441	3300006844	Populus Rhizosphere	YRDRRRYEDFVRSGYASDVKADFRDWHIIVIYLRRYRDRHLQQAPHVEFWQRYFHDAGGTVTRWAGVD*
Ga0075421_1001446104	3300006845	Populus Rhizosphere	AAFNHYGPRRSYEDFLRSGFATDVKADFRDWNIIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGGKITRWAGVD*
Ga0075421_1007251811	3300006845	Populus Rhizosphere	DGFSHYRDRRSYEDFIRSGFASDVKADFRDWSIIVIYLRRYRDRRFQEAAHLEFWQRYFHDSGGTIGRWAGVD*
Ga0075430_1005826322	3300006846	Populus Rhizosphere	TEPFSHYRERSTYDDFVRSGFARDVQADFRDWDIIVIYLRRYRDRRLQQAAHVDFWQRYFHDAGGKITRWAGVD*
Ga0075425_1016036011	3300006854	Populus Rhizosphere	EDFVRSGFANDVKADFRDWNVIVIYLRRYRDRQLQQAAHLDFWQRYFHEAGAKITRWAGVD*
Ga0075425_1022275111	3300006854	Populus Rhizosphere	GFSHYRDRRSYEDFVRSGYASDVKADFRGWDIIVIYLRRYRDRQLQQTSHVEFWQRYFHDAGGKLTRWAGVD*
Ga0075425_1025027571	3300006854	Populus Rhizosphere	DVKADFRDWNVIVIYLRRYRDRQLQQTAHLDFWQRYFHEAGAKITRWAGVD*
Ga0075434_1002432181	3300006871	Populus Rhizosphere	GFSHYRDRNTYDDFVRSGFARDVQADFRDWNILVIYLRRYRDRRLQQTAHVDFWQRYFHDSGGKITRWAGVD*
Ga0075434_1023335611	3300006871	Populus Rhizosphere	TAAFNHYGARRSYEDFQRSGFATDVKADFRDWNVIVIYLRRYNDRQLQQGAHIDFWQRYFHEAGAKITRWAGVD*
Ga0068865_1016091141	3300006881	Miscanthus Rhizosphere	HTAAFNHYGPGRGWDDFVRSGFAADVKADFRDWNVIVIYLRRYHDRQLQQAAHIDFWQRYFHEAGAKIVRWAGVD*
Ga0075436_1004673131	3300006914	Populus Rhizosphere	LRSGFATDVKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGAKITRWAGVD*
Ga0079216_108527301	3300006918	Agricultural Soil	HYRDRRSYEDFVRSGFASDVKADFRDWSIIVVYLRRYRDRHLQQAAHLDFWQRYFHAAGAKVTRWAGVD*
Ga0075419_100647933	3300006969	Populus Rhizosphere	FASDVRADFRDWSIVVVYLRRYHERQLQQAAHLEFWQRYFHAAGGKITRWAGVD*
Ga0066710_1001912343	3300009012	Grasslands Soil	HYGPRRSYEEFLRSGFATDVKADFRDWNIIVVYLRRYHDRHLQQAPHLDFWQRYFHEAGGKITRWAGVD
Ga0066710_1014966711	3300009012	Grasslands Soil	RSGFATDVKADFRDWNIIVIYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD
Ga0075418_107968291	3300009100	Populus Rhizosphere	VRSGFARDVQADFRDWDIIVIYLRRYRDRRLQQAAHVDFWQRYFHDAGGKITRWAGVD*
Ga0066709_1006738041	3300009137	Grasslands Soil	AFNHYGPRRSYEDFLRSGFATDVKADFRDWNIIVVYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD*
Ga0066709_1031650582	3300009137	Grasslands Soil	LRSGFATDVKADFRDWNIIVIYLRRYHDRHLQQATHVDFWQRYFHEAGGKITRWAGVD*
Ga0114129_108551812	3300009147	Populus Rhizosphere	SGFATDVKADFRDWNIIVIYLRRYRDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD*
Ga0105243_113045532	3300009148	Miscanthus Rhizosphere	VKADFRDWNVIVIYLRRYRDRQLQQAAHLDFWQRYFHDAGAKITRWAGVD*
Ga0111538_121196392	3300009156	Populus Rhizosphere	LQNTAGFSHYKERRRYEDFVRSGFASDVKADFRDWNIIVVYLRRYRDRQLQQGPHIDFWQRYCHDAGGNIVRWAGVD*
Ga0075423_105496962	3300009162	Populus Rhizosphere	SDMLQHTAAFNHYGPGRGYDDFVRSGFAADVKADFRDWNVIVIYLRRYHDRQLQQAAHIDFWQRYFHAAGAKIIRWAGVD*
Ga0105249_102679401	3300009553	Switchgrass Rhizosphere	GPRRGYDDFVRSGFATDVKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAVD*
Ga0105071_10456382	3300009808	Groundwater Sand	RHSYEDFVRSGFAKDVRADFRDWTIIVIYLRRYHDRQLQQAGHLDFWQRYFHEAGAKIARWAGVD*
Ga0105082_10330582	3300009814	Groundwater Sand	FAKDVRADFRDWTIIVIYLRRYHDRELQQAGHLDFWQRYFHEAGAKIARWAGVD*
Ga0105068_10976562	3300009836	Groundwater Sand	GHRRSYEEFLRSGFATDVKADFRDWNIIVIYLRRYHDRHLQQAAQVDFWQRYFHEAGGKITRWAGVD*
Ga0126382_120625842	3300010047	Tropical Forest Soil	FASDVKADFRDWSIIVIYLRRYRDRRFQEAAHLEFWQRYFHDSGGKIGRWAGVD*
Ga0126382_124665201	3300010047	Tropical Forest Soil	NTEGFSHYRDRNTYDDFVRSGFARDVQADFRDWNIMVIYLRRYRDRRLQQTAHLDFWQRYFHDAGGKITRWAGVD*
Ga0134067_104310632	3300010321	Grasslands Soil	DVKADFRDWNVIVIYLRRYHDRQLQHAAHIDFWQRYFHEAGAKITRWAGVD*
Ga0134065_104912602	3300010326	Grasslands Soil	YRERRGYEDFVRSGFASDVKADFRGWNIVVIYLRRYRDRHLQQAAHLEFWERYFHAAGGKIVRWAGVD*
Ga0126372_131054732	3300010360	Tropical Forest Soil	QNTAAFNHYGPRRGWDDFVRSGFATDVKADFRDWNVIVIYLRRYRDRQVQQAAHVDFWQRYFHEAGAKITRWAGVD*
Ga0126377_113146271	3300010362	Tropical Forest Soil	SSYDDFVASGFARDVQADFRGWDVIVIYLRRYRDRRLQQAGHVDFWQRYFHDAGAKITRWAGVD*
Ga0126377_121977162	3300010362	Tropical Forest Soil	GYEDFLRSGFATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKISRWAGVD*
Ga0126381_1003960043	3300010376	Tropical Forest Soil	ADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD*
Ga0126383_101770171	3300010398	Tropical Forest Soil	RRGYDDFVRSGFAADVKADFRDWSVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKITRWAGVD*
Ga0137377_103811622	3300012211	Vadose Zone Soil	FLRSGFATDVKADFRDWNIIVVYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD*
Ga0137394_101811472	3300012922	Vadose Zone Soil	FLRSGFATDVKADFRDWNIIVIYLRRYHDRQLQQAAHLDFWQRYFHEAGGKITRWAGVD*
Ga0137359_110111642	3300012923	Vadose Zone Soil	LQNTPAFNHYGPRRSYEEFLRSGFATDVKADFRDWNIIVVYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD*
Ga0126375_107910962	3300012948	Tropical Forest Soil	ATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKITRWAGVD*
Ga0126375_119448012	3300012948	Tropical Forest Soil	YEDFLRSGFATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIEFWQRYFHEAGAKVTRWAGVD*
Ga0126369_100282241	3300012971	Tropical Forest Soil	KADFRDWNVIVIYLRRYNDRQLQQAAHIEFWQRYFHEAGAKITRWAGVD*
Ga0126369_117047962	3300012971	Tropical Forest Soil	YEDFLGSGFATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKITRWAGVD*
Ga0075309_10520431	3300014268	Natural And Restored Wetlands	KADFRDWNVLVVYLRRYHDRHLQQAAHVDFWQRYFHEAGARITRWAGVD*
Ga0132256_1011787351	3300015372	Arabidopsis Rhizosphere	YRDRRSYEDFLRSGFASDVKADFRDWRIIVIYLRRYRDRRFQEAAHLEFWQRYFHDSGGTIGRWAGVD*
Ga0132256_1018905541	3300015372	Arabidopsis Rhizosphere	RRSYEDFLRSGFATDVKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAVD*
Ga0132255_1017467632	3300015374	Arabidopsis Rhizosphere	FVRSGFAKDVKADFRDWNVIVIYLRRYRDRQLQQAAHLDFWQRYFHEAGAKITRWAGVD*
Ga0182036_111415152	3300016270	Soil	NHYGARRTYEDFLRAGFATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKISRWAGVD
Ga0182040_105357881	3300016387	Soil	YEDFLRSGFATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKISRWAGVD
Ga0182037_116730701	3300016404	Soil	MLQHTAAFDQYGARRGYEDFRRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0187786_100613761	3300017944	Tropical Peatland	VKADFRDWNVIVIYLRRYRDRQLQQSEHLDFWQRYFHEAGARITRW
Ga0184634_101613372	3300018031	Groundwater Sediment	GPRTYEDFQSRVAKDVRADFRGWDIIVVYLRRYRDRNLQQQDHLDFWQRYFYDAGGKVIQWAGVD
Ga0187773_100589981	3300018064	Tropical Peatland	YEDFLRSGFAKDVKADFRDWTVIVIYLRRYRDRQLQQSEHLDFWQRYFHEAGARITRWAGVD
Ga0066655_101001702	3300018431	Grasslands Soil	FSHYRERRGYEDFVRSGFASDVKADFRGWNIVVIYLRRYRDRHLQQAAHLEFWERYFHAAGGKIVRWAGVD
Ga0066662_108426301	3300018468	Grasslands Soil	AFNHYGARRSYEDFRRSGFATDVKADFRDWNIIVIYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD
Ga0137408_12938021	3300019789	Vadose Zone Soil	RYASAHRHTGAFNHYGPRRSYDDFLRSGFATDVKADFRDWNIIVIYLRRYHDRQLQQASHIDFWQRYFHEAGGKITRWAGVD
Ga0210143_10227712	3300025792	Natural And Restored Wetlands	HYRDRRSYEDFVRSGFASDVKADFRDWSIIVIYLRRYRDRHLQQGTHVDFWQRYFHEAGGKVTRWAGVD
Ga0207701_102619641	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	AAFSHYGPRRGYDDFVRSGFATDVKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAVD
Ga0207712_107306082	3300025961	Switchgrass Rhizosphere	YEDFIRSGFASDVKADFRDWSIIVIYLRRYRDRRFQEAAHLEFWQRYFHDSGGTIGRWAGVD
Ga0207668_102202651	3300025972	Switchgrass Rhizosphere	VKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAVD
Ga0207678_110007301	3300026067	Corn Rhizosphere	SGFATAVKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAVD
Ga0209239_11299472	3300026310	Grasslands Soil	EDFWRSGFAADVKADFRDWNVIVIYLRRYHDRQLQHAAHIDFWQRYFHEAGAKITRWAGV
Ga0209686_10644572	3300026315	Soil	EDFVRSGFASDVKADFRGWNIVVIYLRRYRDRHLQQAAHLEFWERYFHAAGGKIVRWAGV
Ga0209057_11973872	3300026342	Soil	DVKADFRDWNIIVVYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD
Ga0209690_10291602	3300026524	Soil	MLQNTTAFNHYGPRRSYEDFLRSGFATDVKADFRDWNIIVIYLRRYHDRQLQQAPHLDFWQRYFHEAGGKITRWAGVD
Ga0209884_10367092	3300027013	Groundwater Sand	RSGFATDVKADFRDWNIIVIYLRRYHDRHLQQAAHVDFWQRYFHEAGGKITRWAGVD
Ga0209970_10673922	3300027614	Arabidopsis Thaliana Rhizosphere	SDVKADFRDWHIIVIYLRRYRDRQLQQAAHVEFWQRYFHDAGGKVTRWAGVD
Ga0209814_104752991	3300027873	Populus Rhizosphere	TEGFSHYRDRNTYDDFVRSGFARDVQADFRDWSIIVIYLRRYRDRRLQQTAHVDFWQRYFHDAGGKITRWAGVD
Ga0209481_100095781	3300027880	Populus Rhizosphere	DFLRSGFATDVKADFRDWTIIVIYLRRYNDRQLQQAAHVDFWQRYFHEAGGKIVRWAGVD
Ga0307498_100469231	3300031170	Soil	DDFVRSGFATDVKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGGKITRWAAV
Ga0307495_101614451	3300031199	Soil	VKADFRDWNVIVIYLRRYRDRQLQQASHIDFWQRYFYEAGAKVTRWAGVD
Ga0318561_103680891	3300031679	Soil	TAAFDQYGARRGYEDFLRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWTGVD
Ga0318572_102266531	3300031681	Soil	RGYEDFLRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0307469_100265371	3300031720	Hardwood Forest Soil	HTAAFNHYGPRRSYEDFLRSGFATDVKADFRDWTIIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGGKITRWAGVD
Ga0307469_115312931	3300031720	Hardwood Forest Soil	YEDFVRSGFARDVQADFRDWSIIVVYLRRYRDRRLQQTAHVDFWQRYFHDAGGKITRWAGVD
Ga0307469_124713921	3300031720	Hardwood Forest Soil	SDMLQHTAAFNQYGPRRSYEDFLRSGFATDVKADFRDWNVIVIYLRRYRDRQLQQAAHLDFWQRYFHDAGAKITRWAGVD
Ga0318492_105812791	3300031748	Soil	TAAFDQYGARRGYEDFRRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0318547_101631211	3300031781	Soil	LQHTAAFDQYGARRGYEDFLRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0318567_104108141	3300031821	Soil	SDMLQHTAAFDQYGARRGYEDFLRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0318511_101208271	3300031845	Soil	HYGARRTYEDFLRSGFATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKISRWAGVD
Ga0306919_107499351	3300031879	Soil	LRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0318544_104359971	3300031880	Soil	YGARRGYEDFLRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0318522_103063332	3300031894	Soil	MLQHTAAFDQYGARRGYEDFLRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0310913_105805881	3300031945	Soil	TYEDFLRSGFATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKISRWAGVD
Ga0310911_105232382	3300032035	Soil	DMLQHTAAFDQYGARRGYEDFLRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGAKISRWAGVD
Ga0318549_102221541	3300032041	Soil	RLGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWAGVD
Ga0307471_1012483141	3300032180	Hardwood Forest Soil	YRERNGYEDFVRSGFARDVQADFRDWSIIVVYLRRYRDRRLQQTAHVEFWQRYFHDAGGKITRWAGVD
Ga0307472_1012243341	3300032205	Hardwood Forest Soil	RRSYEDFLRSGFATDVKADFRDWNIIVIYLRRYHDRQLQQAAHIDFWQRYFHEAGGKITRWAGVD
Ga0306920_1020062441	3300032261	Soil	TAAFDQYGARRGYEDFRRSGFANDVKADFRNWDVIVIYLRRYRDRQLQQAAHIDFWQRYFHESGAKITRWTGVD
Ga0318519_105792311	3300033290	Soil	RTYEDFLRSGFATDVKADFRDWNVIVIYLRRYNDRQLQQAAHIDFWQRYFHEAGAKISRWAGVD
Ga0247829_103879812	3300033550	Soil	HYRERRSYADFVQSGFASDVKADFRDWNVMVVYLRRYRDRQLQQGAHVDFWQRYFHDAGGNITRWAGVD
Ga0373950_0119218_3_239	3300034818	Rhizosphere Soil	MLQHTAAFNQYGPRRSYEDFLRSGFATDVKADFRDWNVIVIYLRRYRDRQLQQAAHIDFWQRYFHEAGAKITRWAGVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078357

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences