Metagenome / Metatranscriptome Family F078356

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078356
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	101 residues
Representative Sequence	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVELRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Number of Associated Samples	91
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	24.14 %
% of genes near scaffold ends (potentially truncated)	51.72 %
% of genes from short scaffolds (< 2000 bps)	91.38 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (10.345 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.621 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.27% β-sheet: 0.00% Coil/Unstructured: 36.73%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13577	SnoaL_4	12.93
PF07883	Cupin_2	5.17
PF00044	Gp_dh_N	3.45
PF00450	Peptidase_S10	1.72
PF01266	DAO	1.72
PF02800	Gp_dh_C	1.72
PF01471	PG_binding_1	1.72
PF01872	RibD_C	1.72
PF09413	DUF2007	1.72
PF00083	Sugar_tr	0.86
PF01476	LysM	0.86
PF14329	DUF4386	0.86
PF00520	Ion_trans	0.86
PF02537	CRCB	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	5.17
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.72
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.72
COG2939	Carboxypeptidase C (cathepsin A)	Amino acid transport and metabolism [E]	1.72
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.14 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.72 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	18.10 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.45 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.59 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	1.72 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.86 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.10 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.59 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.59 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	1.72 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.86 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.86 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.10 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.59 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.59 %
Devosia sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia sediminis	1.72 %
Schaalia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Schaalia	0.86 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.86 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.10 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	2.59 %
Devosia sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia sediminis	1.72 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.86 %
Schaalia suimastitidis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Schaalia → Schaalia suimastitidis	0.86 %
Cellulomonas rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas rhizosphaerae	0.86 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.10 %
Streptomyces sp. KY75	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	2.59 %
Devosia sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia sediminis	1.72 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.86 %
Schaalia suimastitidis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Schaalia → Schaalia suimastitidis	0.86 %
Cellulomonas rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas rhizosphaerae	0.86 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8963762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1795	Open in IMG/M
3300000891\|JGI10214J12806_12636717	Not Available	608	Open in IMG/M
3300000956\|JGI10216J12902_102679856	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300000956\|JGI10216J12902_105082375	Not Available	737	Open in IMG/M
3300003987\|Ga0055471_10195192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300003996\|Ga0055467_10244100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300004114\|Ga0062593_100096655	Not Available	2065	Open in IMG/M
3300004114\|Ga0062593_101022439	Not Available	849	Open in IMG/M
3300004114\|Ga0062593_101664189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300004114\|Ga0062593_102034973	Not Available	639	Open in IMG/M
3300004156\|Ga0062589_100164650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1545	Open in IMG/M
3300004156\|Ga0062589_100958673	Not Available	794	Open in IMG/M
3300004157\|Ga0062590_100270636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1297	Open in IMG/M
3300004157\|Ga0062590_101305665	Not Available	715	Open in IMG/M
3300004480\|Ga0062592_100667072	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005093\|Ga0062594_100731118	Not Available	900	Open in IMG/M
3300005093\|Ga0062594_100787743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia sediminis	876	Open in IMG/M
3300005327\|Ga0070658_11411091	Not Available	604	Open in IMG/M
3300005329\|Ga0070683_100421912	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300005332\|Ga0066388_100608326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1714	Open in IMG/M
3300005336\|Ga0070680_100691136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300005337\|Ga0070682_100382307	Not Available	1059	Open in IMG/M
3300005338\|Ga0068868_100217404	Not Available	1599	Open in IMG/M
3300005341\|Ga0070691_10340942	Not Available	830	Open in IMG/M
3300005353\|Ga0070669_101815265	Not Available	532	Open in IMG/M
3300005354\|Ga0070675_100346731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1316	Open in IMG/M
3300005440\|Ga0070705_101892848	Not Available	507	Open in IMG/M
3300005444\|Ga0070694_100733124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300005455\|Ga0070663_100193748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1583	Open in IMG/M
3300005458\|Ga0070681_10617144	Not Available	999	Open in IMG/M
3300005458\|Ga0070681_11803051	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005471\|Ga0070698_100478797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1182	Open in IMG/M
3300005547\|Ga0070693_100824163	Not Available	689	Open in IMG/M
3300005563\|Ga0068855_101581335	Not Available	671	Open in IMG/M
3300005564\|Ga0070664_100908829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	826	Open in IMG/M
3300005564\|Ga0070664_102164711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Schaalia → Schaalia suimastitidis	528	Open in IMG/M
3300005937\|Ga0081455_10009467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10021	Open in IMG/M
3300005937\|Ga0081455_10076702	Not Available	2752	Open in IMG/M
3300006038\|Ga0075365_10057554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2586	Open in IMG/M
3300006844\|Ga0075428_101627761	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300006914\|Ga0075436_101520724	Not Available	508	Open in IMG/M
3300009098\|Ga0105245_10098140	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300009098\|Ga0105245_10141513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2266	Open in IMG/M
3300009100\|Ga0075418_11147589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300009147\|Ga0114129_12806252	Not Available	579	Open in IMG/M
3300009148\|Ga0105243_10334943	Not Available	1384	Open in IMG/M
3300009148\|Ga0105243_11116985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300009156\|Ga0111538_10842594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas rhizosphaerae	1161	Open in IMG/M
3300009156\|Ga0111538_11758866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300009174\|Ga0105241_11141797	Not Available	735	Open in IMG/M
3300009176\|Ga0105242_10547120	Not Available	1109	Open in IMG/M
3300010359\|Ga0126376_10448426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1178	Open in IMG/M
3300010362\|Ga0126377_10022652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5198	Open in IMG/M
3300010362\|Ga0126377_13296867	Not Available	522	Open in IMG/M
3300010371\|Ga0134125_10695233	Not Available	1121	Open in IMG/M
3300010399\|Ga0134127_10731056	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300011119\|Ga0105246_11329264	Not Available	667	Open in IMG/M
3300012900\|Ga0157292_10302832	Not Available	574	Open in IMG/M
3300012909\|Ga0157290_10047946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1090	Open in IMG/M
3300012914\|Ga0157297_10357926	Not Available	570	Open in IMG/M
3300012943\|Ga0164241_10051944	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3004	Open in IMG/M
3300012943\|Ga0164241_10425424	Not Available	953	Open in IMG/M
3300012943\|Ga0164241_11255998	Not Available	548	Open in IMG/M
3300012984\|Ga0164309_10733204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300012989\|Ga0164305_10221948	Not Available	1345	Open in IMG/M
3300013100\|Ga0157373_10463243	Not Available	913	Open in IMG/M
3300013104\|Ga0157370_10187580	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300013307\|Ga0157372_11252532	Not Available	856	Open in IMG/M
3300013308\|Ga0157375_10549561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1316	Open in IMG/M
3300014263\|Ga0075324_1135872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300014325\|Ga0163163_11914177	Not Available	653	Open in IMG/M
3300015371\|Ga0132258_12503982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1291	Open in IMG/M
3300015372\|Ga0132256_100995667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300015374\|Ga0132255_101767906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	939	Open in IMG/M
3300019356\|Ga0173481_10861318	Not Available	507	Open in IMG/M
3300020070\|Ga0206356_10070533	Not Available	519	Open in IMG/M
3300020081\|Ga0206354_10129139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1374	Open in IMG/M
3300022467\|Ga0224712_10427550	Not Available	634	Open in IMG/M
3300022883\|Ga0247786_1104165	Not Available	615	Open in IMG/M
3300023266\|Ga0247789_1006805	Not Available	1744	Open in IMG/M
3300025901\|Ga0207688_10446859	Not Available	806	Open in IMG/M
3300025901\|Ga0207688_10617522	Not Available	684	Open in IMG/M
3300025907\|Ga0207645_10579190	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	762	Open in IMG/M
3300025917\|Ga0207660_10008894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6493	Open in IMG/M
3300025917\|Ga0207660_10137596	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1865	Open in IMG/M
3300025917\|Ga0207660_10305110	Not Available	1268	Open in IMG/M
3300025919\|Ga0207657_10117678	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300025919\|Ga0207657_10629103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300025920\|Ga0207649_10186579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1455	Open in IMG/M
3300025927\|Ga0207687_10479210	Not Available	1036	Open in IMG/M
3300025935\|Ga0207709_11035481	Not Available	672	Open in IMG/M
3300025935\|Ga0207709_11655313	Not Available	532	Open in IMG/M
3300025938\|Ga0207704_11724534	Not Available	538	Open in IMG/M
3300025944\|Ga0207661_10201692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1749	Open in IMG/M
3300025945\|Ga0207679_11332836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	659	Open in IMG/M
3300025945\|Ga0207679_11578650	Not Available	601	Open in IMG/M
3300025949\|Ga0207667_10922198	Not Available	864	Open in IMG/M
3300025960\|Ga0207651_11509978	Not Available	605	Open in IMG/M
3300026041\|Ga0207639_10781089	Not Available	889	Open in IMG/M
3300026067\|Ga0207678_10307122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1364	Open in IMG/M
3300026095\|Ga0207676_11449392	Not Available	683	Open in IMG/M
3300026095\|Ga0207676_11956215	Not Available	585	Open in IMG/M
3300026943\|Ga0207486_1010988	Not Available	666	Open in IMG/M
3300027909\|Ga0209382_12297546	Not Available	507	Open in IMG/M
3300028587\|Ga0247828_10787370	Not Available	602	Open in IMG/M
3300028592\|Ga0247822_10130910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1832	Open in IMG/M
3300028592\|Ga0247822_10911312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300028592\|Ga0247822_11005946	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300028809\|Ga0247824_10767623	Not Available	593	Open in IMG/M
3300030336\|Ga0247826_10523324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300031716\|Ga0310813_11214009	Not Available	695	Open in IMG/M
3300031944\|Ga0310884_10105119	Not Available	1390	Open in IMG/M
3300032013\|Ga0310906_10741391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia sediminis	689	Open in IMG/M
3300032075\|Ga0310890_11591247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300032122\|Ga0310895_10409197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300033550\|Ga0247829_10541598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	966	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.03%
Host-Associated	Host-Associated	43.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.31%
Plants	Host-Associated → Plants	43.97%
Aquatic	Environmental → Aquatic	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.21%
Marine	Environmental → Aquatic → Marine	1.72%
Roots	Host-Associated → Plants → Roots	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.10%
Loam	Environmental → Terrestrial → Soil → Loam	12.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.45%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	10.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.62%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.59%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026943	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A3-10 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_03264040	2088090015	Soil	MSYDLGMPIVAGVRMPRDQALELAALLTRSGFDRTSRILLEAVTNGHEFVALSMDDREAMLAVLDHPPTETLVELRTVLFDELNWRRGLVGSARRPQTPYAQPG
JGI10214J12806_126367171	3300000891	Soil	SHVEPSALDRRFRTIRGAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
JGI10216J12902_1026798562	3300000956	Soil	VASSRPSLGSDPTGDPNRIPAMLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGGRRPQRSPYANHG
JGI10216J12902_1050823752	3300000956	Soil	LGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0055471_101951922	3300003987	Natural And Restored Wetlands	AMPYDCLMPIVAGLRMPREEALELAALLTRSGFDRTSRVLLDAVTNGHEFVALATDDREAMLAVLERPPTETLIELRRVLFDELNWRRGLIGGARRPQTPYAQHG*
Ga0055467_102441002	3300003996	Natural And Restored Wetlands	MPYDCLMPIVAGLRMPREEALELAALLTRSGFDRTSRVLLDAVTNGHEFVALATDDREAMLAVLERPPTETLIELRRVLFDELNWRRGLIGGARRPQTPYAQHG*
Ga0062593_1000966552	3300004114	Soil	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG*
Ga0062593_1010224391	3300004114	Soil	MPIVAGVRIPREQTLNLGALLARAGFDRTSRILLDAVTVGQEFIAVAADDREAILAVLDHATTDELVELRTSLFAELNWRRGLIGGAPSQPSPFANHG*
Ga0062593_1016641891	3300004114	Soil	MSYDLGMPIVAGVRMPRDQALELAALLTRSGFDRTSRILLEAVTNGHEFVALSMDDREAMLAVLDHPPTETLVELRTVLFDELNWRRGLVGSARRPQTPYAQPG*
Ga0062593_1020349731	3300004114	Soil	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0062589_1001646503	3300004156	Soil	MPYDSVMPIVAGVRIPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG*
Ga0062589_1009586731	3300004156	Soil	WRTILGMPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG*
Ga0062590_1002706361	3300004157	Soil	MSYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTSGHEFVALATDDREAMLAVLDHPASDTLVELRTVLFGELNWRRGLLGGVPRPQTPYAQHG*
Ga0062590_1013056651	3300004157	Soil	GVRIPREQTLNLGALLARAGFDRTSRILLDAVTVGQEFIAVAADDREAILAVLDHATTDELVELRTSLFAELNWRRGLIGGAPSQPSPFANHG*
Ga0062592_1006670721	3300004480	Soil	MPYDSVMPIVAGVRIPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQ
Ga0062594_1007311181	3300005093	Soil	MPILAGVRIPREQTLELAALLARAGFDRSSRTLLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLSGVRPRSRSPFAIHG*
Ga0062594_1007877432	3300005093	Soil	MLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHA*
Ga0070658_114110911	3300005327	Corn Rhizosphere	PSALDRRFRTIRGAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0070683_1004219121	3300005329	Corn Rhizosphere	MPYDSVMPIVAGVRIPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATEDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG*
Ga0066388_1006083262	3300005332	Tropical Forest Soil	MPIVAGTRLPRDQTLQLAAMLTRAGFDRTARVLLDAVTNGHEFVALATDDREALLAVLAHPKTDELVALRTVLFDELNWQRGLIGGTPRPRRAPYANHG*
Ga0070680_1006911361	3300005336	Corn Rhizosphere	MPILAGVRIPREQTLELAALLARAGFDCSSRTLLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLSGVRPRSRSPFAIHG*
Ga0070682_1003823072	3300005337	Corn Rhizosphere	VMPIVAGVRIPREQTLNLGALLARAGFDRTSRILLDAVTVGQEFIAVAADDREAILAVLDHATTDELVELRTSLFAELNWRRGLIGGAPSQPSPFANHG*
Ga0068868_1002174041	3300005338	Miscanthus Rhizosphere	SLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG*
Ga0070691_103409422	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PWRTILGMPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG*
Ga0070669_1018152651	3300005353	Switchgrass Rhizosphere	MPILAGVRIPREQTLELAALLARAGFDRSSRTLLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLS
Ga0070675_1003467313	3300005354	Miscanthus Rhizosphere	WRTILGMPILAGVRIPREQTLELAALLARAGFDCSSRTLLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLSGVRPRSRSPFAIHG*
Ga0070705_1018928481	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVGRPQRSPYANHG*
Ga0070694_1007331241	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTSGHEFVALATDDREAMLAVLDHPASDTLVELRTVLFGELNWRRGLLGGVPRPQTPYAQHG*
Ga0070663_1001937481	3300005455	Corn Rhizosphere	LHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0070681_106171442	3300005458	Corn Rhizosphere	LLARAGFDRTSRILLDAVTVGQEFIAVAADDREAILAVLDHATTDELVELRTSLFAELNWRRGLIGGAPSQPSPFANHG*
Ga0070681_118030512	3300005458	Corn Rhizosphere	LVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHG*
Ga0070698_1004787971	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPYDSVMPIVAGVRIPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNW
Ga0070693_1008241631	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	GMPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG*
Ga0068855_1015813351	3300005563	Corn Rhizosphere	ASRHRRTGALASESHVEPSALDRRFRTIRGAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0070664_1009088292	3300005564	Corn Rhizosphere	MRRLAGRAMSYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTNGHEFVALATDDREAMLAVLAHPPNEILVELRTVLFAELNWRRGLIGGVRRPQTPYAQHG*
Ga0070664_1021647111	3300005564	Corn Rhizosphere	MPYDSVMPIVAGVRVPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG*
Ga0081455_100094673	3300005937	Tabebuia Heterophylla Rhizosphere	MPREQTLQLAALLTRGGFDRTSRILLDAVTNGQEFVALETDDREAMLAVLDHPPTETLVELRTVLFGELNWRRGLVGGARRPQTPYAQHG*
Ga0081455_100767023	3300005937	Tabebuia Heterophylla Rhizosphere	MLTRAGFDRSTRLLLDAVTNGQEFIALETDDREAILAVLDHPQTDQLVELRTALFAELDWQRGFGRTPRAQRSPYASHG*
Ga0075365_100575541	3300006038	Populus Endosphere	SCAGRRRAMPYDSVMPIVAGVRIPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG*
Ga0075428_1016277611	3300006844	Populus Rhizosphere	MPYDSGMPIVAGVRVPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGVRRPQTPYAQIG*
Ga0075436_1015207241	3300006914	Populus Rhizosphere	GQLGRAKAASVASSRPPLGSDPTGDPNRMPAMLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHG*
Ga0105245_100981403	3300009098	Miscanthus Rhizosphere	EQTLNLGALLARAGFDRTSRILLDAVTVGQEFIAVAADDREAILAVLDHATTDELVELRTSLFAELNWRRGLIGGAPSQPSPFANHG*
Ga0105245_101415133	3300009098	Miscanthus Rhizosphere	MPILAGVRIPRDQTLELAALLARAGFDRSSRTLLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLSGVRPRSRSPFAIHG*
Ga0075418_111475891	3300009100	Populus Rhizosphere	MPYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGVRRPQTPYAQHG*
Ga0114129_128062521	3300009147	Populus Rhizosphere	MPYDSGMPIVAGVRVPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAALNWRRGLIGGVRRPQTPYAQLG*
Ga0105243_103349433	3300009148	Miscanthus Rhizosphere	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKQG*
Ga0105243_111169852	3300009148	Miscanthus Rhizosphere	MPAMLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHG*
Ga0111538_108425941	3300009156	Populus Rhizosphere	MPIVAGTRISRQQTLELAAKLARDGCDRTARVLLDAITVHSDFVALSTEDREALLSVLDHPQDELVELRTTLFAELNWRRGLIGGAPSQPSPFANHG*
Ga0111538_117588662	3300009156	Populus Rhizosphere	MPYDSVMPIVAGVRTPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG*
Ga0105241_111417972	3300009174	Corn Rhizosphere	VPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG*
Ga0105242_105471202	3300009176	Miscanthus Rhizosphere	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLSGVRPRSRSPYAIPG*
Ga0126376_104484262	3300010359	Tropical Forest Soil	VPILAGIRVSREGTLHLSAMLTRAGFDRTSRVLLDAVTNGQEFVALATDDREAVLAVLDGPSSDELVALRSMLFDELNWQRGLIGEARLPHRSPYAQRS*
Ga0126377_100226525	3300010362	Tropical Forest Soil	MPIVAGTRLPRDQTLQLAGMLTRAGFDHTARVLLDAVTNGHEFVALATDDREALLAVLAHPKTDELVALRTVLFDELNWQRGLIGGTPRPRRAPYANHG*
Ga0126377_132968672	3300010362	Tropical Forest Soil	MPIVAGTRLPRDQTLQLAAMLTRAGFDRTARVLLDAVTNGHEFVALATDDREALLAVLAHPKTDELVALRTVLFDELNWQRGLIGGTPRARGAPYANHG*
Ga0134125_106952332	3300010371	Terrestrial Soil	MPIVAGIRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0134127_107310562	3300010399	Terrestrial Soil	VRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0105246_113292642	3300011119	Miscanthus Rhizosphere	MRRLAGRAMSYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTNGHEFVALATDDREAMLAVLAHPPNEILVELRTVLFAELNWRRGLIGGVRRPQTPYAQLG*
Ga0157292_103028322	3300012900	Soil	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRG
Ga0157290_100479462	3300012909	Soil	MSYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTYGHEFVALSMDDREAMLAVLDHPPTETLVELRTVLFDELNWRRGLVGSARRPQTPYAQPG*
Ga0157297_103579261	3300012914	Soil	MSYDLGMPIVAGVRMPRDQALELAALLTRSGFDRTSRILLEAVTNGHEFVALSMDDREAMLAVLDHPPTETLVELRTVLFDELNWRRGLVGSARRPQTPYAQP
Ga0164241_100519442	3300012943	Soil	MPIVAGVRIPREQTLHLGALLARAGFDHTSRLLLDAVTVGQEFIALAADDREAILAVLGHATTDELVELRTSLFAELNWRRGLIGGAPSQPSPFANHG*
Ga0164241_104254241	3300012943	Soil	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVELRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0164241_112559981	3300012943	Soil	MPIVAGVRIPREQALQLAALLTRAGFDRTSRILLDATTTGYEFVALGLEEREAILAVLDHPPTDELIEIRTVLFDELNWRRGL
Ga0164309_107332041	3300012984	Soil	MPAMLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVGRPQRSPYANHG*
Ga0164305_102219482	3300012989	Soil	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILGVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0157373_104632431	3300013100	Corn Rhizosphere	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALAPADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKPG*
Ga0157370_101875803	3300013104	Corn Rhizosphere	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLYAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0157372_112525322	3300013307	Corn Rhizosphere	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDVREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG*
Ga0157375_105495611	3300013308	Miscanthus Rhizosphere	GAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG*
Ga0075324_11358722	3300014263	Natural And Restored Wetlands	VAGLRMPREEALELAALLTRSGFDRTSRVLLDAVTNGHEFVALATDDREAILFVLDRPTTETLIELRRVLFDELNWRRGLIGGARRPQTPYAQHG*
Ga0163163_119141771	3300014325	Switchgrass Rhizosphere	GCWFESNPGSCKPMRRLAGRAMSYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTNGHEFVALATDDREAMLAVLAHPPNEILVELRTVLFAELNWRRGLIGGVRRPQTPYAQHG*
Ga0132258_125039823	3300015371	Arabidopsis Rhizosphere	MAYDFAMPIVAGVRMPRDQTLQLAALLTRGGFDRTSRLLLDAVTNGHEFVALSTDDREAMLAVLDHPPTETLVELRTVLFDELNWRRGLIGGVRRPQTPFAQPG*
Ga0132256_1009956673	3300015372	Arabidopsis Rhizosphere	EQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG*
Ga0132255_1017679063	3300015374	Arabidopsis Rhizosphere	MSYDSVMPIVAGVRVPRAQTLQLAALLTRAGFDRTSRILLDAVTNGHEFVALSTDDREAMLAVLDHPPSEILVELRTVLFADLNWRRGLVGGARRPQTPYAQHG*
Ga0173481_108613181	3300019356	Soil	MPYDSVMPIVAGVRIPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG
Ga0206356_100705331	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0206354_101291391	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	IRGAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0224712_104275501	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0247786_11041652	3300022883	Soil	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG
Ga0247789_10068054	3300023266	Soil	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG
Ga0207688_104468591	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ESHVEPSALDRRFRTIRGAMPIVAGVRSPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0207688_106175221	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPILAGVRIPREQTLELAALLARAGFDRSSRTLLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLSGVRPRSRSPFAIHG
Ga0207645_105791902	3300025907	Miscanthus Rhizosphere	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELDWRRGLVSGVRARSRSPYAIPG
Ga0207660_100088947	3300025917	Corn Rhizosphere	ESHVEPSALDRRFRTIRGAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0207660_101375961	3300025917	Corn Rhizosphere	MPIVAGVRIPREQTLNLGALLARAGFDRTSRILLDAVTVGQEFIAVAADDREAILAVLDHATTDELVELRTSLFAELNWRRGLIGGAPSQPSPFANHG
Ga0207660_103051101	3300025917	Corn Rhizosphere	MPILAGVRIPREQTLELAALLARAGFDCSSRTLLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLSGVRPRSRSPFAIHG
Ga0207657_101176781	3300025919	Corn Rhizosphere	VRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVELRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0207657_106291032	3300025919	Corn Rhizosphere	MPYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTNGHEFVALATDDREAMLAVLDHPPTEILVELRTVLFAELNWRRGLLG
Ga0207649_101865793	3300025920	Corn Rhizosphere	GAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0207687_104792102	3300025927	Miscanthus Rhizosphere	VTGQALGQVDDDRAEVVRRTGALASESHVEPSALDRRFRTIRGAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0207709_110354811	3300025935	Miscanthus Rhizosphere	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGV
Ga0207709_116553131	3300025935	Miscanthus Rhizosphere	MLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPY
Ga0207704_117245341	3300025938	Miscanthus Rhizosphere	MPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGL
Ga0207661_102016923	3300025944	Corn Rhizosphere	MPYDSVMPIVAGVRIPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATEDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG
Ga0207679_113328362	3300025945	Corn Rhizosphere	MRRLAGRAMSYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTNGHEFVALATDDREAMLAVLAHPPNEILVELRTVLFAELNWRRGLIGGVRRPQTPYAQHG
Ga0207679_115786501	3300025945	Corn Rhizosphere	MPILAGVRIPREQTLELAALLARAGFDCSSRTLLDATTRGYEFVALGLDDREAVLAVLDHPPTEELIELRTVLFDELNWRRGVLSGVRPRSRSPFAI
Ga0207667_109221981	3300025949	Corn Rhizosphere	ASRHRRTGALASESHVEPSALDRRFRTIRGAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0207651_115099781	3300025960	Switchgrass Rhizosphere	MPIVAGVRIPREQTLNLGALLARAGFDRTSRILLDAVTVGQEFIAVAADDREAILAVLDHATTDELVELRTSLFAELNWRRGLIGG
Ga0207639_107810891	3300026041	Corn Rhizosphere	GVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG
Ga0207678_103071221	3300026067	Corn Rhizosphere	TLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0207676_114493921	3300026095	Switchgrass Rhizosphere	RSASRHRRTGALASESHVEPSALDRRFRTIRGAMPIVAGVRIPREQTLHLGALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0207676_119562151	3300026095	Switchgrass Rhizosphere	PREQTLNLGALLARAGFDRTSRILLDAVTVGQEFIAVAADDREAILAVLDHATTDELVELRTSLFAELNWRRGLIGGAPSQPSPFANHG
Ga0207486_10109881	3300026943	Soil	GALLARAGFDRTSRILLDAVTVGQEFIALATADREAILAVLDHATTDELVKLRTSLFAELNWRRGLLGGEPPRPSPFAKHG
Ga0209382_122975461	3300027909	Populus Rhizosphere	MPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYA
Ga0247828_107873701	3300028587	Soil	MLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHA
Ga0247822_101309105	3300028592	Soil	AGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG
Ga0247822_109113121	3300028592	Soil	MLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHG
Ga0247822_110059461	3300028592	Soil	AVMLPERRASSANRPRARCAPDEGGGCKLLPRLTGRAMPYDSVMPIVAGVRVPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG
Ga0247824_107676232	3300028809	Soil	MLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMID
Ga0247826_105233241	3300030336	Soil	PRLTGRAMPYDSVMPIVAGVRIPREQTLELAALLTRAGFDRTSRILLDAVTKGNEFVALATDDREAMLAVLDHPPNEILVELRTVLFAELNWRRGLIGGIRRPQTPYAQLG
Ga0310813_112140092	3300031716	Soil	MSYDSVMPIVAGVRMPREQTLQLAALLTRAGFDRTSRILLDAVTNGHEFVALATDDREAMLAVLDHPPTEILVELRTVLFAELNWRRGLLGGARLPQTPYAQHG
Ga0310884_101051191	3300031944	Soil	TILGMPILAGVRVPREQSLELAALLARAGFDRSSRILLDATTRGYEFVALGLDDREAVLAVLEHPPTEELIELRTVLFDELNWRRGLVSGVRARSRSPYAIPG
Ga0310906_107413911	3300032013	Soil	MLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSP
Ga0310890_115912471	3300032075	Soil	LGSDPTGDPNRMPAMLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHG
Ga0310895_104091972	3300032122	Soil	VASSRPPLGSDPTGDPNRMPAMLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATDDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHG
Ga0247829_105415981	3300033550	Soil	SRPPLGSDPTGDPNRMPAMLVVAGIRVPREQALHLAALLARGGSDRTSRILLDAITNGQQFVALATEDREAILAVLDRPQTDELVELRTALFDELNWRRGMIDGVRRPQRSPYANHG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078356

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences