Metagenome / Metatranscriptome Family F078348

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078348
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	95 residues
Representative Sequence	MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Number of Associated Samples	97
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.14 %
% of genes near scaffold ends (potentially truncated)	36.21 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.862 % of family members)
Environment Ontology (ENVO)	Unclassified (29.310 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.724 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.03% β-sheet: 0.00% Coil/Unstructured: 70.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01850	PIN	39.66
PF02796	HTH_7	2.59
PF12680	SnoaL_2	1.72
PF01152	Bac_globin	0.86
PF00239	Resolvase	0.86
PF14690	zf-ISL3	0.86
PF03795	YCII	0.86
PF04120	Iron_permease	0.86
PF01526	DDE_Tnp_Tn3	0.86
PF06348	DUF1059	0.86
PF00963	Cohesin	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.86
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.86
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.86
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.41 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	16.38 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.03 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	15.52 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.59 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	1.72 %
Balneolaeota	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota	1.72 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1.72 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	15.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.59 %
Balneolia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia	1.72 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	1.72 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	1.72 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	15.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.59 %
Chloroflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae	1.72 %
Balneolales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales	1.72 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	1.72 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Desulfofundulus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus	9.48 %
Desulfotomaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	6.03 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.59 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	1.72 %
Balneolaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae	1.72 %
Oscillochloridaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae	1.72 %
Maioricimonas	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Desulfotomaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	6.03 %
Desulfofundulus australicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus australicus	2.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.59 %
Aliifodinibius	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius	1.72 %
Oscillochloris	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris	1.72 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1.72 %
Desulfofundulus kuznetsovii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus kuznetsovii	1.72 %
Maioricimonas rarisocia	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas → Maioricimonas rarisocia	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Desulfotomaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	6.03 %
Desulfofundulus australicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus australicus	2.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.59 %
Nitrolancea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea	1.72 %
unclassified Aliifodinibius	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → unclassified Aliifodinibius	1.72 %
Candidatus Oscillochloris fontis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Candidatus Oscillochloris fontis	1.72 %
Desulfofundulus kuznetsovii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus kuznetsovii	1.72 %
Maioricimonas rarisocia	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas → Maioricimonas rarisocia	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Desulfotomaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	6.03 %
Desulfofundulus australicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus australicus	2.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.59 %
Nitrolancea hollandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	1.72 %
Aliifodinibius sp. WN023	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → unclassified Aliifodinibius → Aliifodinibius sp. WN023	1.72 %
Candidatus Oscillochloris fontis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Candidatus Oscillochloris fontis	1.72 %
Desulfofundulus kuznetsovii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus kuznetsovii	1.72 %
Maioricimonas rarisocia	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas → Maioricimonas rarisocia	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000044\|ARSoilOldRDRAFT_c011018	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300003203\|JGI25406J46586_10224091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	550	Open in IMG/M
3300003324\|soilH2_10016178	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300005187\|Ga0066675_10436018	Not Available	972	Open in IMG/M
3300005289\|Ga0065704_10273205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	938	Open in IMG/M
3300005294\|Ga0065705_10122658	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300005332\|Ga0066388_103197152	Not Available	837	Open in IMG/M
3300005347\|Ga0070668_102047451	Not Available	528	Open in IMG/M
3300005445\|Ga0070708_100544067	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300005558\|Ga0066698_10797736	Not Available	612	Open in IMG/M
3300005587\|Ga0066654_10091836	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300005764\|Ga0066903_101975723	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300005764\|Ga0066903_105751463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	652	Open in IMG/M
3300005981\|Ga0081538_10098090	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300006845\|Ga0075421_101432817	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300006845\|Ga0075421_101630950	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006846\|Ga0075430_100468095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus kuznetsovii	1040	Open in IMG/M
3300006854\|Ga0075425_102153087	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006969\|Ga0075419_10531965	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300007004\|Ga0079218_10911672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus kuznetsovii	865	Open in IMG/M
3300007076\|Ga0075435_101710508	Not Available	552	Open in IMG/M
3300007255\|Ga0099791_10157556	Not Available	1062	Open in IMG/M
3300007790\|Ga0105679_10541434	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300009038\|Ga0099829_10202938	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → unclassified Aliifodinibius → Aliifodinibius sp. WN023	1605	Open in IMG/M
3300009038\|Ga0099829_10425477	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300009088\|Ga0099830_10271966	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1346	Open in IMG/M
3300009089\|Ga0099828_10264295	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → unclassified Aliifodinibius → Aliifodinibius sp. WN023	1544	Open in IMG/M
3300009090\|Ga0099827_10235664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	1533	Open in IMG/M
3300009090\|Ga0099827_10344607	Not Available	1267	Open in IMG/M
3300009100\|Ga0075418_10412540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	1445	Open in IMG/M
3300009100\|Ga0075418_10416931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	1437	Open in IMG/M
3300009100\|Ga0075418_12038185	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300009137\|Ga0066709_103046273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus	614	Open in IMG/M
3300009147\|Ga0114129_10833811	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300009147\|Ga0114129_11774754	Not Available	751	Open in IMG/M
3300009147\|Ga0114129_13033483	Not Available	551	Open in IMG/M
3300009157\|Ga0105092_10149076	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300009162\|Ga0075423_10733760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus	1044	Open in IMG/M
3300009553\|Ga0105249_12808910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300009812\|Ga0105067_1107535	Not Available	513	Open in IMG/M
3300010044\|Ga0126310_11078573	Not Available	637	Open in IMG/M
3300010047\|Ga0126382_10822636	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010358\|Ga0126370_10885083	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300010358\|Ga0126370_12548672	Not Available	510	Open in IMG/M
3300010359\|Ga0126376_10587097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus	1051	Open in IMG/M
3300010359\|Ga0126376_11302592	Not Available	747	Open in IMG/M
3300010361\|Ga0126378_11683416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus australicus	721	Open in IMG/M
3300010362\|Ga0126377_10811659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus	994	Open in IMG/M
3300010362\|Ga0126377_11177638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus	836	Open in IMG/M
3300010366\|Ga0126379_10830048	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300010398\|Ga0126383_12551026	Not Available	595	Open in IMG/M
3300011270\|Ga0137391_10483894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1049	Open in IMG/M
3300011271\|Ga0137393_10361473	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300012189\|Ga0137388_10431437	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300012189\|Ga0137388_11181609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus	702	Open in IMG/M
3300012199\|Ga0137383_10587628	Not Available	815	Open in IMG/M
3300012201\|Ga0137365_11108169	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012204\|Ga0137374_10884539	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012211\|Ga0137377_11542163	Not Available	589	Open in IMG/M
3300012211\|Ga0137377_11701103	Not Available	552	Open in IMG/M
3300012212\|Ga0150985_115095045	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012355\|Ga0137369_10554833	Not Available	805	Open in IMG/M
3300012357\|Ga0137384_10865097	Not Available	729	Open in IMG/M
3300012361\|Ga0137360_10633323	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300012361\|Ga0137360_10649704	Not Available	904	Open in IMG/M
3300012362\|Ga0137361_10117493	All Organisms → cellular organisms → Bacteria	2339	Open in IMG/M
3300012582\|Ga0137358_10436102	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300012917\|Ga0137395_11213501	Not Available	527	Open in IMG/M
3300012922\|Ga0137394_10048942	All Organisms → cellular organisms → Bacteria → Proteobacteria	3485	Open in IMG/M
3300012930\|Ga0137407_10351260	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300012944\|Ga0137410_11775224	Not Available	544	Open in IMG/M
3300012948\|Ga0126375_11111829	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300013306\|Ga0163162_10853662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1025	Open in IMG/M
3300014487\|Ga0182000_10670976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus australicus	509	Open in IMG/M
3300015242\|Ga0137412_10229912	Not Available	1473	Open in IMG/M
3300016341\|Ga0182035_10433184	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300016422\|Ga0182039_10875300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	801	Open in IMG/M
3300018063\|Ga0184637_10553380	Not Available	661	Open in IMG/M
3300018077\|Ga0184633_10121365	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300018079\|Ga0184627_10435386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	682	Open in IMG/M
3300018422\|Ga0190265_11547084	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300018429\|Ga0190272_11265867	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300018432\|Ga0190275_11072570	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300018469\|Ga0190270_10664275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1027	Open in IMG/M
3300019458\|Ga0187892_10569179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus australicus	509	Open in IMG/M
3300022563\|Ga0212128_10956127	Not Available	503	Open in IMG/M
3300025327\|Ga0209751_10582060	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300025910\|Ga0207684_10142963	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300027636\|Ga0214469_1224242	Not Available	509	Open in IMG/M
3300027743\|Ga0209593_10010917	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas → Maioricimonas rarisocia	3759	Open in IMG/M
3300027846\|Ga0209180_10143837	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300027882\|Ga0209590_10184424	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300027882\|Ga0209590_10391485	Not Available	897	Open in IMG/M
3300027909\|Ga0209382_10306043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	1791	Open in IMG/M
3300027909\|Ga0209382_11382695	Not Available	708	Open in IMG/M
3300027961\|Ga0209853_1058087	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300030006\|Ga0299907_10217429	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300030006\|Ga0299907_10294114	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300030620\|Ga0302046_10968654	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300030829\|Ga0308203_1097187	Not Available	501	Open in IMG/M
3300030830\|Ga0308205_1036068	Not Available	621	Open in IMG/M
3300030903\|Ga0308206_1167701	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300030990\|Ga0308178_1089727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Candidatus Oscillochloris fontis	638	Open in IMG/M
3300030993\|Ga0308190_1095245	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031092\|Ga0308204_10202359	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031092\|Ga0308204_10309826	Not Available	531	Open in IMG/M
3300031093\|Ga0308197_10162699	Not Available	728	Open in IMG/M
3300031093\|Ga0308197_10242975	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031114\|Ga0308187_10070988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Candidatus Oscillochloris fontis	1015	Open in IMG/M
3300031228\|Ga0299914_10688732	Not Available	864	Open in IMG/M
3300031890\|Ga0306925_10247087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1923	Open in IMG/M
3300032005\|Ga0307411_12088747	Not Available	530	Open in IMG/M
3300032261\|Ga0306920_104015889	Not Available	534	Open in IMG/M
3300033407\|Ga0214472_10010879	All Organisms → cellular organisms → Bacteria	9456	Open in IMG/M
3300034172\|Ga0334913_103541	Not Available	602	Open in IMG/M
3300034643\|Ga0370545_110154	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.31%
Host-Associated	Host-Associated	20.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.14%
Plants	Host-Associated → Plants	20.69%
Aquatic	Environmental → Aquatic	5.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Sediment	Environmental → Aquatic → Sediment	2.59%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.86%
Cave	Environmental → Terrestrial → Cave	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.66%
Loam	Environmental → Terrestrial → Soil → Loam	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.59%
Sand	Environmental → Terrestrial → Soil → Sand	2.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.59%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.86%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.86%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.86%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.86%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARSoilOldRDRAFT_0110182	3300000044	Arabidopsis Rhizosphere	MAKELKRIDISSIPELVKLAHEVQSTNEPSILQQEREDVAMLTPLKPVPKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV*
JGI25406J46586_102240911	3300003203	Tabebuia Heterophylla Rhizosphere	MNQIAKEPRHINVSSIPELLKLVQKVRQTNEPTILREESEDVAMLMPIKPVGKTRVRGKPVTADDPLWKLVGIGHSGKGDISENKHTYLARAYRPQ*
soilH2_100161782	3300003324	Sugarcane Root And Bulk Soil	VPQRAKEPRHMDLSSIPELQKLVHEVRHTNEPSILREESEDVAMLTPLKPRAKRGGRGKPTTADDPLWKLVGVGHSATGDGSAN*
Ga0066675_104360181	3300005187	Soil	MAKEPRHIDISSIPALQKLVHEVRQTNEPSILREESEDVAMLTPLKPGAKRSARGKPTTADDPLWKLVGIGHSGKGDVSENKHTYLAEASLPRREG*
Ga0065704_102732051	3300005289	Switchgrass Rhizosphere	NATTKEVNQMAKEPRHIDISSIPELVKLVHEVRQTNEPSILREESEDLAMLTPLKQVAKRSVRGTPTTADDPLWKLVGIGHSGKDDISANKHKYLAEAYLPHKQT*
Ga0065705_101226583	3300005294	Switchgrass Rhizosphere	MAKEPRHIDISSIPELVKLVHEVRQTNEPSILREESEDLAMLTPLKQVAKRSVRGTPTTADDPLWKLVGIGHSGKDDISANKHKYLAEAYLPHKQT*
Ga0066388_1031971522	3300005332	Tropical Forest Soil	MAEELKRIDISSIPELVKLANEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSEN
Ga0070668_1020474512	3300005347	Switchgrass Rhizosphere	IDISSIPELLKLVQEVRQTNTPTILQQEREDVAMLIPMKPVDKTRVRGKPVTADDPLWKLVGIGNSGKGDISANKHTYLARAYRPR*
Ga0070708_1005440672	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAHR*
Ga0066698_107977361	3300005558	Soil	MAKEPNRIDISSIPELLKLVHEVRQTNEPRILREESADVAMLTPLKPATKSSVRGKPTSADDPLWKLVGIGHSGKGDISANKHKYLACAYRPH*
Ga0066654_100918362	3300005587	Soil	MAKEPRHIDISSIPALQKLVHEVRQTNEPSILREEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHQYLAEAYRPRREV*
Ga0066903_1019757232	3300005764	Tropical Forest Soil	MAEELKRIDISSIPELVKLANEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHTYLAEAYLPHKQV*
Ga0066903_1057514632	3300005764	Tropical Forest Soil	MAKEPNRIDISSIPELQKLVHEVRQTNEPRILREESEDVAMLTPLKPRAKRSGRSKPVRADDPLWKLVGIGHSGKGDISANKHKYLAE
Ga0081538_100980902	3300005981	Tabebuia Heterophylla Rhizosphere	MAKEKELKRIDISDIPELLTLVQEVQRTNEPRILQQDHEDLVMLTPIKPVAKRKARGKPTTADDPLWKLIGIGRSGTGDVSENKHKYLAEAYLHHKRV*
Ga0075421_1014328171	3300006845	Populus Rhizosphere	MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGARGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLTEAYLPRKQV*
Ga0075421_1016309502	3300006845	Populus Rhizosphere	MAKEKAPKRIDIGSIPELVHLAQEVQRTNESAILQQESEDVAILTPIKPMAKKRSVRGKPTSADDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQT*
Ga0075430_1004680952	3300006846	Populus Rhizosphere	MAKEPRHIDISSIPELQKLVHEVRQTNEPAILREEREDVAKLTPIKSKAKRSVRGKPTSADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRREV*
Ga0075425_1021530872	3300006854	Populus Rhizosphere	PKRVDISGIPELLSIAQEVRQTNEPAILQQEREELAMLTPIKPVAKRRVRAKPTNADDPLWNLVGIGHSGKGDVSENKHKYLAEAYLPRKEV*
Ga0075419_105319651	3300006969	Populus Rhizosphere	MAEELKRIDISSIPELVKLANEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKRV*
Ga0079218_109116722	3300007004	Agricultural Soil	IDISSIPELQKLVREVRQTNEPAILREESEDVAMLTPLKPVTKRSVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQT*
Ga0075435_1017105082	3300007076	Populus Rhizosphere	MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHHYLAEAYLRYKRE*
Ga0099791_101575562	3300007255	Vadose Zone Soil	MAKETKHIDVSSIPELVKLAQEVRSTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGDDPLWQLAGIGHSGSGDISDNKHQYLAEAYLHHKQA*
Ga0105679_105414342	3300007790	Soil	MAKEPRHIDISSIPELQKLVHEVRQTNEPSILREESEDVAMLSPLKPRAKRSAKGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKEV*
Ga0099829_102029381	3300009038	Vadose Zone Soil	MAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSVRGKPTSVDDPLWKLVGIGHSGRGD
Ga0099829_104254773	3300009038	Vadose Zone Soil	VSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGDDPLWKLVGIGHSGRGDISENKHKYLTEAYLHHKQA*
Ga0099830_102719662	3300009088	Vadose Zone Soil	MAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVAKGSVRGKPTSVDDPLWKLVGIGHSGSGDISENKHKYLTEAYLHHKQT*
Ga0099828_102642953	3300009089	Vadose Zone Soil	MAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSVRGKPTSVDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA*
Ga0099827_102356642	3300009090	Vadose Zone Soil	MAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRKQV*
Ga0099827_103446073	3300009090	Vadose Zone Soil	MAKETKHIDVSSIPEVLKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQT*
Ga0075418_104125402	3300009100	Populus Rhizosphere	VEEMAKEKAPKRIDIGSIPELVHLAQEVQRTNESAILQQESEDVAILTPIKPMAKKRSVRGKPTSADDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQT*
Ga0075418_104169313	3300009100	Populus Rhizosphere	MAKERKRIDISSIPALVKLAHEVRSTNEPSILQQEREDVAMLAPLTPVPKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKQV*
Ga0075418_120381851	3300009100	Populus Rhizosphere	GGVTQMAKEPRHIDISSIPELLKLVQEVRQTNELTILQQENEDVAMLTPLKPRAKRSARGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRREV*
Ga0066709_1030462731	3300009137	Grasslands Soil	GVKQMAKELKRIDISSSPELVKYAHEVRSTNEPSILQQEREDVAMLTPLKPITKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLADAYLPRKQV*
Ga0114129_108338111	3300009147	Populus Rhizosphere	MAKEPKQIDISSMPELVKLAQEVRSTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGNDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQT*
Ga0114129_117747542	3300009147	Populus Rhizosphere	MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHTYLAEAYLPRKQV*
Ga0114129_130334832	3300009147	Populus Rhizosphere	MAKEPRHIDISSIPELQKLVREVRQTNEPSILREESEDVAMLTPLKPVNKRSARGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPHKQV*
Ga0105092_101490763	3300009157	Freshwater Sediment	MAKEKAPKRIDISRIPELLHLAQEVRSTNESRILQQESEELAMLTPITPVAKRSVRGKPTTADDPLWKLVGIGHSGKGDISANTHQYLADAYLHHKQA*
Ga0075423_107337601	3300009162	Populus Rhizosphere	KRITKGGGKQMAKERKRIDISSIPALVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKQV*
Ga0105249_128089101	3300009553	Switchgrass Rhizosphere	ISSIPELLKLVQEVRQTNTPTILQQEREDVAMLIPMKPVGKTRVRGKPVTADDPLWKLVGIGHSGKGDISANKHTYLARAYRPR*
Ga0105067_11075351	3300009812	Groundwater Sand	MAKEPQRIDISSIPELLRIAQEVRRTNESAVLQQESEELAMLTPIKPVAKRRARGKPTSADDPLWKLVGIGHSGKGDISENTHKYLAEAYLHHKQA*
Ga0126310_110785731	3300010044	Serpentine Soil	MAKEPRHIDISSIPELQKLVREVRQTNEPSILREEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHQYLA
Ga0126382_108226362	3300010047	Tropical Forest Soil	MAKEKEPKRIDISSIPELLSIAQEVRRTNESRILKQESEDLAMLIPITPAAKRRVRGKPTSADDPLWKLIGIGHSGKGDISANKHQYLADAYLHHK*
Ga0126370_108850832	3300010358	Tropical Forest Soil	MAKEPNHIDISSIPELQKLVHEVRKTNEPRILREESEDVAMLTPLKPRAKRSGRSKPVSADDPLWKLVGIGHSGKGDISANKHKYPAEAYLPHKQA*
Ga0126370_125486721	3300010358	Tropical Forest Soil	MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV*
Ga0126376_105870971	3300010359	Tropical Forest Soil	MAKEPNRIDISSIPELLKLVHEVRQTNEPRILREESEDVAMLTPLKPRVTRSVRGKPTSADDPLWKLVGIGHSGKGDISANKHKYLAEAYLPHKQV*
Ga0126376_113025921	3300010359	Tropical Forest Soil	MVKEPKYIDISSIPELLKLVHEVRQTNEPRILREESEDVAMLTPLKPKSTRSVRGKPVTADDPLWKLVGIGHSGKGDVSENKHKYLARA
Ga0126378_116834161	3300010361	Tropical Forest Soil	MAKEPNRIDISSIPELQKLVHEVRQTNEPRILREESEDVAMLTPLKPRAKRSGRSKPVSADDPLWKLVGIGHSGKGDISANKHTYLAEAYLDDKHK
Ga0126377_108116591	3300010362	Tropical Forest Soil	MAKEPRHIDISSIPELQKLVQEVRQTKAPTILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHTYLAEAYLPHKQV*
Ga0126377_111776382	3300010362	Tropical Forest Soil	MAKELKRIDISSIPDLVKLAHEVRRTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKSDVSANKHTYLAEAYLPHKQV*
Ga0126379_108300482	3300010366	Tropical Forest Soil	MAKEPNRIDISSIPELQKLVHEVRQTNEPRILREESEDVAMLTPLKPRAKRSGRSKPVRADDPLWKLVGIGHSGKGDISANKHKYLAEAYLPRKQV*
Ga0126383_125510261	3300010398	Tropical Forest Soil	MAKEFKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQG*
Ga0137391_104838942	3300011270	Vadose Zone Soil	MAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVVKRSVRGKPTTGDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA*
Ga0137393_103614731	3300011271	Vadose Zone Soil	KEEVLPMAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSVRGKPTSVDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA*
Ga0137388_104314371	3300012189	Vadose Zone Soil	MAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSGRGKPTSVDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA*
Ga0137388_111816092	3300012189	Vadose Zone Soil	KGGVKQMAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKQV*
Ga0137383_105876281	3300012199	Vadose Zone Soil	LTKEVKHMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAYLPHKQV*
Ga0137365_111081692	3300012201	Vadose Zone Soil	MAKELKHIDISSIPELLKLVQEVRQTNEPSILREESEDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV*
Ga0137374_108845392	3300012204	Vadose Zone Soil	ILTKEVKHMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAYLPHKQV*
Ga0137377_115421631	3300012211	Vadose Zone Soil	LTKEVKHMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEA
Ga0137377_117011032	3300012211	Vadose Zone Soil	MAKEKEPKRIDITRIPELLSIAQEVRRTNESRILKQESEDLAMLTPIKPVAKRSVRGKPTSADDPLWKLIGIGHSGKGDISANKHQYLADA
Ga0150985_1150950452	3300012212	Avena Fatua Rhizosphere	MCVKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGVRGKPTTADDPLWKLVGIGHSGKGDVSAN
Ga0137369_105548331	3300012355	Vadose Zone Soil	MAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAYLPHKQV*
Ga0137384_108650972	3300012357	Vadose Zone Soil	MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHTYLAEAYLPRKQV*
Ga0137360_106333231	3300012361	Vadose Zone Soil	KLVQEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHTYLAEAYLSHKQV*
Ga0137360_106497042	3300012361	Vadose Zone Soil	MAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV*
Ga0137361_101174932	3300012362	Vadose Zone Soil	LTKEVKHMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHTYLAEAYLSHKQV*
Ga0137358_104361022	3300012582	Vadose Zone Soil	MAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHTYLAEAYLSHNQV*
Ga0137395_112135011	3300012917	Vadose Zone Soil	MAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVTGKPTAADDPLRKLVGIGHSGKGDVSENKHKYL
Ga0137394_100489424	3300012922	Vadose Zone Soil	MAKEKEPKRIDISRIPELLNLAHEVRSTNESRILQQEREDLAMLTPITPMAKRRLKSKPTSVDDPLWKLVGIGHSGKGDISENTHKYLADAYLHHK*
Ga0137407_103512602	3300012930	Vadose Zone Soil	MAKEKEPKRIDITRIPELLSIAQEVRRTNESRILKQESEDLAMLTPIKPVAKRSVRGKPTSADDPLWKLIGIGHSGKGDISGNKHKYLADAYLHHKEA*
Ga0137410_117752242	3300012944	Vadose Zone Soil	MAKELKRIDISSVPELMKLVQEVRSTNEPRILQEESEDVALLTPLKPVSKRSVRGKPTTADDPLWKLVGIGHSGKGDISANKHTYLARAYRPR*
Ga0126375_111118292	3300012948	Tropical Forest Soil	EKGGVTQMAKEPRHIDISSIPELQKLVQEVRQTNEPSILREESEDVAMLTPLKPVTRKRVRSKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRKQV*
Ga0163162_108536622	3300013306	Switchgrass Rhizosphere	MAKEPRHIDISSIPELLKLVQEVRQTNTPTILQQEREDVAMLIPMKPVGKTRVRGKPVTADDPLWKLVGIGHSGKGDISANKHTYLARAYRPR*
Ga0182000_106709761	3300014487	Soil	VSKEVNQMAKEPKRIDISRMPELLSIAQEVRSTNEPRILQQENEDVAMLTPITPVAKRSVRGNPTSADDPLWKLIGIGHSGKGDISENTHKYLAEASLHHK*
Ga0137412_102299122	3300015242	Vadose Zone Soil	MAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENK
Ga0182035_104331843	3300016341	Soil	PELVKLAHEVRSTNDPTILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLAGIGHSGKSDVSANKHKYLAEAYLPHKQV
Ga0182039_108753001	3300016422	Soil	KRIDISSIPDLLKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKRSVRGKPTSAEDPLWKLVGIGHSGKGDISANKHKYLAEAYLPHKQV
Ga0184637_105533802	3300018063	Groundwater Sediment	MAKELKRIDIGSIPELLKLVQEVRTTNESAVLQQESEDVALLSPIKPVTKRRARGQPTSADDPLWKLVGIGHSGRGDISANKHTYLADASLHHKQA
Ga0184633_101213652	3300018077	Groundwater Sediment	MAKELKRIDIGSIPELLKLVQEVRTTNESAVLQQESEDVALLSPIKPVTKRRARGQQTSADDPLWKLVGIGHSGRGDISANKHTYLADASLHHKQA
Ga0184627_104353862	3300018079	Groundwater Sediment	KELKRIDIGSIPELLKLVQEVRTTNESAVLQQESEDVALLSPIKPVTKRRARGKPTSADDPLWKLVGIGHSGRGDISANKHTYLADASLHHKQA
Ga0190265_115470842	3300018422	Soil	VVYCNKGKYLAGTYLKGEVKQMAKEKAPKRIDISSIPELLSMAQEVRRTNESRILKQESEDLAMLTPITPVAKRSVRGKPTSADDPLWKLVGIGHSGKGDISENKHKYLADAYLHHKEA
Ga0190272_112658671	3300018429	Soil	MAKEKALQRIDISGIPELLSIAQEVRQTNEPAILQQKREELAMLTPIKPVVKRRVRGKPTNADDPLWNLVGIGHSGKGDVSANKHKYLAEAYLPHKQA
Ga0190275_110725701	3300018432	Soil	MAKEKALQRIDISGIPELLSIAQEVRHTNEPAILQQKREELAMLTPIKPVAKRRVRGKPTNADDPLWNLVGIGHSGKGDVSANKHKYLAEAYLPHKQA
Ga0190270_106642752	3300018469	Soil	MRKEKAPKRIDISRIPELLNLAQEVRSTKESCILQQGSEDLVMLTPVAKRRIRGKPITADDPLWKLVGIGHSGKGDISETNHKYLAEAYLPHKPA
Ga0187892_105691791	3300019458	Bio-Ooze	MAKEKEPKRIDISSMPELLHIVQEVRTTNEPAVLQQENEDVAMLTPIKSAGKRRGRGKPVTADDPLWKLVGIGRSGKGDVSANKHQYLAEAYLPRKQT
Ga0212128_109561271	3300022563	Thermal Springs	MAKELKRIDISGIPELLSIAEEVRRTNEPCVLKQDNEDLVIVTPIKPVAKRGAKGKPVTKDDPLWKLVGIGHSGGPGDVSANKHQYLADAYLHQQKQA
Ga0209751_105820602	3300025327	Soil	LVKELKRVDISNIPELVRIAQEVRDSNEPQLLRRDNEELAILTPVRPSVKRRPRGRPTTADDPLWKLVGMGDSGGPGDVSVNKHKYLAEAYLHGDKHA
Ga0207684_101429632	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAHR
Ga0214469_12242421	3300027636	Soil	MAKEKEPQRIDISSIPELLKLVQEVRQTNEPTILREESEDVAMLTPLKPVTKRSVRGKPTTADDPLWKLVGIGHSGKGDVSENKHK
Ga0209593_100109173	3300027743	Freshwater Sediment	MAKEKAPKRIDISRIPELLHLAQEVRSTNESRILQQESEELAMLTPITPVAKRSVRGKPTTADDPLWKLVGIGHSGKGDISANTHQYLADAYLHHKQA
Ga0209180_101438373	3300027846	Vadose Zone Soil	MAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSVRGKPTSVDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA
Ga0209590_101844242	3300027882	Vadose Zone Soil	MAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRKQV
Ga0209590_103914852	3300027882	Vadose Zone Soil	MAKETKHIDVSSIPEVLKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGDDPLWKLVGIGHSGRGDISENKHQYLAEAYLHHKQT
Ga0209382_103060431	3300027909	Populus Rhizosphere	MAKEPRHIDISSIPELQKLVHEVRQTNEPAILREEREDVAKLTPIKSKAKRSVRGKPTSADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRREV
Ga0209382_113826952	3300027909	Populus Rhizosphere	MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGARGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLHHKQT
Ga0209853_10580873	3300027961	Groundwater Sand	MAKEPKHIDISSIPELVKLVHEVRQTNEPSILQEEREDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISANKHTYLAEAYLPHKQV
Ga0299907_102174292	3300030006	Soil	MAKEKEPQRIDISSIPELLKLVQEMRQTNEPSILREESEDVAMLTPLKPVTKRSVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQT
Ga0299907_102941142	3300030006	Soil	MAKENAPKRIDISRMPELLQLAHEVRATNEPAILQQEREDLAMLTPIHPVARRRVRGKPTSADDPLWNLVGIGHSGRGDISENTHKYLAEAYLHHKHA
Ga0302046_109686542	3300030620	Soil	MANEPKRIDISRIPELLHLAQEVQSTNESRILQQDSEDLAMLTPITPVSKRSVRGKPTSADDPLWKLVGIGHSGRGDISENKHQYLADVYLHRKQA
Ga0308203_10971871	3300030829	Soil	MAKELRHIDISSMPELLKLVREVRQTNEPSILREESEDVAMLMPIKPVGKTRVRGKPVTADDPLLKLVGIGHSGKSDISANKHAYLARAYRPR
Ga0308205_10360682	3300030830	Soil	MAKELKHIDISSIPELLKLVQEVRQTNEPSILREESEDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0308206_11677012	3300030903	Soil	MAKEKAPKRIDISRIPELLTLAQEVRSTNESRILQQESEDLAMLTPITPVAKRSVRGKPTSADDPLWKLVGIGHSGKGDISENTHQYLADAYLHHKQA
Ga0308178_10897271	3300030990	Soil	KELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLRPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0308190_10952452	3300030993	Soil	GKQMAKELKRIDISSIPELVKLAHEVRSTNESSILQQEREDVAMLTPLKPVPQRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHTYLADAYLHHKQV
Ga0308204_102023592	3300031092	Soil	MATELKHIDISSIPELLKLVQEVRQTNEPSILREESEDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0308204_103098261	3300031092	Soil	MAKEKALQRIDISGIPELLSIAQEVRQTNESAILQQKREELAMLTPIKPVAKRRVRGKPTSADDPLWKLIGIGHSGRGDISANKHQYLAEAYLPHKQA
Ga0308197_101626992	3300031093	Soil	MAKELRHIDISSMPELLKLVREVRQTNEPSILREESEDVAMLMPIKPVGKTRVRGKPVTADDPLLKLVGIGHSGKSDISANKHACLARAYRPR
Ga0308197_102429751	3300031093	Soil	SLKRIDKGGVKQMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKQE
Ga0308187_100709882	3300031114	Soil	MAEELKRIDISSIPELVKLANEVRSTNEPSILQQEREDVAMLTPLRPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0299914_106887322	3300031228	Soil	MAKEKEPQRIDISSIPELLKLVQEVRQTNEPTILREESEDVAMLTPLKPVTKRSVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHEQA
Ga0306925_102470872	3300031890	Soil	MAKELKRIDISSIPELVKLAHEVRSTNDPTILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLAGIGHSGKSDVSANKHKYLAEAYLPHKQV
Ga0307411_120887472	3300032005	Rhizosphere	QMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0306920_1040158891	3300032261	Soil	MAKELKRIDISSIPELVKLAHEVRSTNDPTILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLAGIGHSGKSDVSANKHKYLTKAYLPHKQ
Ga0214472_100108793	3300033407	Soil	MAKDLKRIDISGIPELLSIAHEVRSANESRILRQDGEDLAILTPIKPAAKRSARGKPVTKDDSLWKLVGIGHSGAGDISANKHKYLAEAYLNHPKQA
Ga0334913_103541_331_600	3300034172	Sub-Biocrust Soil	MAKEPKHIEISRMPELVKLVHEVRSTNEPTILREERQDVAMLTPIKPVVTRSVRGTPVTPDDPLFKLVGIGHSGKGDVSANTHTYLADAS
Ga0370545_110154_372_608	3300034643	Soil	LAQEVRTTNESAVLQQESEDVALLSPIKPVTKRRARGKPTTADDPLWKLVGIGHSGRGDISANKHTYLADAYLHHKQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078348

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences