Metagenome / Metatranscriptome Family F078340

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078340
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	142 residues
Representative Sequence	MATKLPELREGTLATRLSDPEPERDRRLLDAVGGLFDQLIDRILLSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALV
Number of Associated Samples	97
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.50 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	92.24 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.621 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (12.931 % of family members)
Environment Ontology (ENVO)	Unclassified (37.931 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.621 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.14% β-sheet: 8.33% Coil/Unstructured: 46.53%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13396	PLDc_N	60.34
PF07690	MFS_1	6.90
PF01850	PIN	1.72
PF01638	HxlR	0.86
PF00583	Acetyltransf_1	0.86
PF03480	DctP	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.62 %
Unclassified	root	N/A	41.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.62 %
Unclassified	root	N/A	41.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.62 %
Unclassified	root	N/A	41.38 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.14 %
Unclassified	root	N/A	41.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.69 %
Unclassified	root	N/A	41.38 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36.21 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	11.21 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	7.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.59 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	10.34 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	7.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.59 %
Planococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae	0.86 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	10.34 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	7.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.59 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.86 %
Sporosarcina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae → Sporosarcina	0.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	10.34 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	7.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.59 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.86 %
Sporosarcina newyorkensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae → Sporosarcina → Sporosarcina newyorkensis	0.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11215377	Not Available	572	Open in IMG/M
3300000956\|JGI10216J12902_113686961	Not Available	768	Open in IMG/M
3300001989\|JGI24739J22299_10195797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300002077\|JGI24744J21845_10060082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300003993\|Ga0055468_10203429	Not Available	610	Open in IMG/M
3300003993\|Ga0055468_10225156	Not Available	584	Open in IMG/M
3300004013\|Ga0055465_10198994	Not Available	657	Open in IMG/M
3300004156\|Ga0062589_101511221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300004463\|Ga0063356_103546943	Not Available	672	Open in IMG/M
3300004463\|Ga0063356_105522386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	543	Open in IMG/M
3300004480\|Ga0062592_100944475	Not Available	782	Open in IMG/M
3300005337\|Ga0070682_100514026	Not Available	930	Open in IMG/M
3300005337\|Ga0070682_101465076	Not Available	586	Open in IMG/M
3300005341\|Ga0070691_10185644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1085	Open in IMG/M
3300005344\|Ga0070661_100938396	Not Available	716	Open in IMG/M
3300005344\|Ga0070661_101852894	Not Available	512	Open in IMG/M
3300005356\|Ga0070674_100780334	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005366\|Ga0070659_101276976	Not Available	651	Open in IMG/M
3300005441\|Ga0070700_101135426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300005444\|Ga0070694_101231593	Not Available	628	Open in IMG/M
3300005459\|Ga0068867_102071659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae → Sporosarcina → Sporosarcina newyorkensis	539	Open in IMG/M
3300005466\|Ga0070685_10048142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2454	Open in IMG/M
3300005544\|Ga0070686_100456235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	984	Open in IMG/M
3300005545\|Ga0070695_101706570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	527	Open in IMG/M
3300005563\|Ga0068855_100639108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1144	Open in IMG/M
3300005844\|Ga0068862_100307983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1459	Open in IMG/M
3300005844\|Ga0068862_102381370	Not Available	541	Open in IMG/M
3300006852\|Ga0075433_10894807	Not Available	774	Open in IMG/M
3300009098\|Ga0105245_10294414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1591	Open in IMG/M
3300009156\|Ga0111538_10756993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1230	Open in IMG/M
3300009156\|Ga0111538_10846587	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1158	Open in IMG/M
3300009176\|Ga0105242_11546031	Not Available	695	Open in IMG/M
3300009868\|Ga0130016_10474496	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300009873\|Ga0131077_10300965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1595	Open in IMG/M
3300010375\|Ga0105239_10281780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1871	Open in IMG/M
3300012891\|Ga0157305_10145146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	634	Open in IMG/M
3300012897\|Ga0157285_10096746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300012905\|Ga0157296_10196958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	640	Open in IMG/M
3300012910\|Ga0157308_10087021	Not Available	895	Open in IMG/M
3300012916\|Ga0157310_10029885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1475	Open in IMG/M
3300012943\|Ga0164241_10262959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1233	Open in IMG/M
3300012987\|Ga0164307_11933615	Not Available	500	Open in IMG/M
3300013307\|Ga0157372_11822494	Not Available	700	Open in IMG/M
3300013308\|Ga0157375_10593273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300014271\|Ga0075326_1111439	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300014310\|Ga0075331_1197853	Not Available	509	Open in IMG/M
3300014325\|Ga0163163_11333985	Not Available	779	Open in IMG/M
3300014326\|Ga0157380_10067759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2875	Open in IMG/M
3300014745\|Ga0157377_10002199	All Organisms → cellular organisms → Bacteria	8573	Open in IMG/M
3300014968\|Ga0157379_10717517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300015371\|Ga0132258_13095643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1150	Open in IMG/M
3300015371\|Ga0132258_13312300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300015372\|Ga0132256_100090778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2951	Open in IMG/M
3300015372\|Ga0132256_100183246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2130	Open in IMG/M
3300017792\|Ga0163161_10476589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1013	Open in IMG/M
3300017792\|Ga0163161_11363879	Not Available	618	Open in IMG/M
3300018469\|Ga0190270_13165026	Not Available	521	Open in IMG/M
3300018476\|Ga0190274_10905684	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300018481\|Ga0190271_11197940	Not Available	882	Open in IMG/M
3300018481\|Ga0190271_12395908	Not Available	631	Open in IMG/M
3300020081\|Ga0206354_10951890	Not Available	595	Open in IMG/M
3300022883\|Ga0247786_1034489	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300022906\|Ga0247766_1178395	Not Available	555	Open in IMG/M
3300022915\|Ga0247790_10135270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300023072\|Ga0247799_1006892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1604	Open in IMG/M
3300023072\|Ga0247799_1089586	Not Available	545	Open in IMG/M
3300023073\|Ga0247744_1038242	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300023077\|Ga0247802_1059033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	618	Open in IMG/M
3300023102\|Ga0247754_1134995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	608	Open in IMG/M
3300023275\|Ga0247776_10195166	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300025792\|Ga0210143_1097821	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300025796\|Ga0210113_1014328	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1655	Open in IMG/M
3300025901\|Ga0207688_10305044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M
3300025911\|Ga0207654_10772327	Not Available	693	Open in IMG/M
3300025912\|Ga0207707_11370863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	565	Open in IMG/M
3300025920\|Ga0207649_11489959	Not Available	536	Open in IMG/M
3300025923\|Ga0207681_11483688	Not Available	569	Open in IMG/M
3300025925\|Ga0207650_10984848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300025926\|Ga0207659_10649109	Not Available	902	Open in IMG/M
3300025927\|Ga0207687_10585393	Not Available	939	Open in IMG/M
3300025932\|Ga0207690_10848480	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300025932\|Ga0207690_11574504	Not Available	549	Open in IMG/M
3300025935\|Ga0207709_10664735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300025936\|Ga0207670_11838809	Not Available	515	Open in IMG/M
3300025937\|Ga0207669_11962060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300025944\|Ga0207661_10286892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1472	Open in IMG/M
3300025944\|Ga0207661_10751782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	897	Open in IMG/M
3300025944\|Ga0207661_11802853	Not Available	557	Open in IMG/M
3300025944\|Ga0207661_12019633	Not Available	522	Open in IMG/M
3300025949\|Ga0207667_10240031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1855	Open in IMG/M
3300025981\|Ga0207640_10911751	Not Available	768	Open in IMG/M
3300026067\|Ga0207678_10162888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1905	Open in IMG/M
3300026095\|Ga0207676_11758626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	618	Open in IMG/M
3300026116\|Ga0207674_10259899	All Organisms → cellular organisms → Bacteria → Acidobacteria	1684	Open in IMG/M
3300026121\|Ga0207683_10122501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2335	Open in IMG/M
3300026960\|Ga0207582_1031892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	507	Open in IMG/M
3300028381\|Ga0268264_10813514	Not Available	934	Open in IMG/M
3300028592\|Ga0247822_10800402	Not Available	768	Open in IMG/M
3300028592\|Ga0247822_11964786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300028802\|Ga0307503_10071011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300028812\|Ga0247825_10568316	Not Available	811	Open in IMG/M
3300030336\|Ga0247826_10916413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300031547\|Ga0310887_10051281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1853	Open in IMG/M
3300031908\|Ga0310900_11890388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300031940\|Ga0310901_10020475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1909	Open in IMG/M
3300031943\|Ga0310885_10293428	All Organisms → cellular organisms → Bacteria → Terrabacteria group	838	Open in IMG/M
3300031944\|Ga0310884_10772462	Not Available	586	Open in IMG/M
3300031996\|Ga0308176_10662944	Not Available	1079	Open in IMG/M
3300032002\|Ga0307416_103735089	Not Available	510	Open in IMG/M
3300032075\|Ga0310890_11017228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	667	Open in IMG/M
3300032122\|Ga0310895_10590954	Not Available	568	Open in IMG/M
3300033551\|Ga0247830_10579772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300033551\|Ga0247830_11192461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.17%
Host-Associated	Host-Associated	43.10%
Engineered	Engineered	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.86%
Plants	Host-Associated → Plants	43.10%
Aquatic	Environmental → Aquatic	4.31%
Wastewater	Engineered → Wastewater	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.38%
Marine	Environmental → Aquatic → Marine	4.31%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.72%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.72%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.79%
Loam	Environmental → Terrestrial → Soil → Loam	12.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.07%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.62%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.03%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.03%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.72%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.72%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026960	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-10 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_112153771	3300000890	Soil	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPA
JGI10216J12902_1136869611	3300000956	Soil	MTANPEEPREASLAIRLPDPEPNDRRLLDAVGGLVDQVIDRILLSPDRVTSAAEGKRLMAGDDDTEAFTDTLQRVAVIATPIVRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVRE
JGI24739J22299_101957971	3300001989	Corn Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRR
JGI24744J21845_100600822	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRV
Ga0055468_102034291	3300003993	Natural And Restored Wetlands	VSGAPEPREATLAVRLPDPGQGPEHDRRLIAAVSGLLDDLVSRVLLSPERVTTAAEGKRLMTADDDSEAFTDTLQRIAMIATPIVRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVREVRVIGSLLAHRLEVATGRPPDPALVKQLAVELYLSPGRTPRLE
Ga0055468_102251562	3300003993	Natural And Restored Wetlands	MTEKPESREASLATRVSPPEPERNRLLLDAVGGLFDNVIDRILLSPERVTSAAEGKRLLARDDDTEMFTDTVQRVAVVATPVVRALARGARWLPRVPWVLVASTTASLVVTLRAGVGEVRVIGSLVA
Ga0055465_101989942	3300004013	Natural And Restored Wetlands	VSGAPEPREATLAVRLPDPGQGPEHDRRLIAAVSGLLDDLVSRVLLSPERVTTAAEGKRLMTADDDSEAFTDTLQRIAMIATPIVRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVREVRVIGSLLAHRLEVATGRPPDPALVKQ
Ga0062589_1015112212	3300004156	Soil	MATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDEAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETG
Ga0063356_1035469432	3300004463	Arabidopsis Thaliana Rhizosphere	MTVNEQEQEPRDASLAVRVPDPEPEHDRRLVDAVGGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIIRTVARGSRFLPRVPWVLVASTTASLVVTLSSGVREVRVLGSLIAHRLELATG
Ga0063356_1055223861	3300004463	Arabidopsis Thaliana Rhizosphere	MATKLPELREGTLATRLSDPEPERDRRLLDAVGGLFDQLIDRILLSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALV
Ga0062592_1009444752	3300004480	Soil	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPAD
Ga0070682_1005140261	3300005337	Corn Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRLVKQLTLELYLGPKRTPTLSGGLQLGKLVR*
Ga0070682_1014650762	3300005337	Corn Rhizosphere	VATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRV
Ga0070691_101856443	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MATKLPEPREGTLATPLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYL
Ga0070661_1009383961	3300005344	Corn Rhizosphere	MATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDEAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPAL
Ga0070661_1018528942	3300005344	Corn Rhizosphere	VTTNAPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHE
Ga0070674_1007803341	3300005356	Miscanthus Rhizosphere	MTVNEQEPREATLAVRVPDPEPEHDRRLFDAVGGLVDGLVDQVVDRILLSPDRITSAAEGKRVMAGDDETEAFTDTLQRIAVIATPIVRTVARGSRWLPKVPWVLVASTTASLVV
Ga0070659_1012769762	3300005366	Corn Rhizosphere	MATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDEAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPAD
Ga0070700_1011354261	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDRADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRLVK
Ga0070694_1012315931	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATG
Ga0068867_1020716591	3300005459	Miscanthus Rhizosphere	MTVNEQEPREATLAVRVPDPEPEHDRRLFDAVGGLVDGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIVRTVARGSRWLPKVPWVLVASTTASLVVTLTAGVREVRVLGSLIAHRLELATGRPPDPALVKQLALELYLSPSRTPKL
Ga0070685_100481424	3300005466	Switchgrass Rhizosphere	VTTNVPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLLAYRLEQATGRPADP
Ga0070686_1004562351	3300005544	Switchgrass Rhizosphere	VTTNVPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLV
Ga0070695_1017065701	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPA
Ga0068855_1006391083	3300005563	Corn Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRLVKQLTLELYL
Ga0068862_1003079833	3300005844	Switchgrass Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRLVK
Ga0068862_1023813701	3300005844	Switchgrass Rhizosphere	MAVEQQPREASLATPLASPGGPEHDRRLLDAVGGLFDQVVDRILLSPERVTSAAEGKRLIAADDDAEGLTDTLQRVAVIATPIVRMVARGARWLPRVPWVLVASTTASLVVTLRAGVHEVRVLGSLIAHRLEQATGRPADPALVKLLTLELYLSPGRTPRLDGGLRLGKLV
Ga0075433_108948071	3300006852	Populus Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAH
Ga0105245_102944143	3300009098	Miscanthus Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLE
Ga0105245_110194243	3300009098	Miscanthus Rhizosphere	MATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLR
Ga0111538_107569933	3300009156	Populus Rhizosphere	MATKLPEPREGTLATPLSDPGPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRL
Ga0111538_108465871	3300009156	Populus Rhizosphere	MATKLPDLREGTLATRLSDPEPERDRTLLDAVGGLFDQLIDRILLSPDRVTSAAEGKRLIALDDDAEDVADRVQRVAMIATPIVRTLARGSRFLPRVPWVLVASTTASLAVTLRAGVREVRVLGSLVAYRL
Ga0105242_115460312	3300009176	Miscanthus Rhizosphere	VTTNAPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLVAYRLEQATGRPADPALVKQLTL
Ga0130016_104744961	3300009868	Wastewater	MPTDLPDLREGTLATRLPDPEPEHDRRLLDAVGALFDQLIDRVLLSPERVTSAAEGKRLIALDDDTEDVADRVQRVAVIATPIVRTVARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLV
Ga0131077_103009653	3300009873	Wastewater	MPTDLPDLREGTLATRLPDPEPEHDRRLLDAVGALFDQLIDRVLLSPERVTSAAEGKRLIALDDDTEDVADRVQRVAVIATPIVRTVARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAHRLEQETGRPADPALVKRLTLSLYL
Ga0105239_102817803	3300010375	Corn Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRLVKQLTLELYLGPKRTPT
Ga0157305_101451461	3300012891	Soil	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTPSPTDAL
Ga0157285_100967461	3300012897	Soil	MATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDEAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRV
Ga0157296_101969581	3300012905	Soil	MATKLPDLREGTLATRLSDPEPERDRTLLDAVGGLFDQLIDRILLSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALV
Ga0157286_100275991	3300012908	Soil	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVT
Ga0157308_100870211	3300012910	Soil	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQELR
Ga0157310_100298851	3300012916	Soil	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRLVKQLTLELYLGPKRTPTLSGGLQLGKL
Ga0164241_102629593	3300012943	Soil	MATKLPELREGTLATRLSDPEPERDRRLLDAVGGLFDQLIDRILLSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTPSPTGDLP
Ga0164307_119336151	3300012987	Soil	METKLPEPREATLATRLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLAPR
Ga0157372_118224941	3300013307	Corn Rhizosphere	MATKLPGPREGTLATPLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIAIPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVRE
Ga0157375_105932731	3300013308	Miscanthus Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLS
Ga0075326_11114391	3300014271	Natural And Restored Wetlands	VSGAPEPREASLAIRLPDPGQGPEHDRRLIAAVSGLLDDLVSRVLLSPERVTTAAEGKRLMTADDDSEAFTDTLQRIAMIATPIVRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVREVRVIGSLLAHRLEVATGRPPDPALVKQLAVELY
Ga0075331_11978531	3300014310	Natural And Restored Wetlands	MTEKPESREASIATSVSPPEPERNRLLLDAVGGLFDNVIDRILLSPERVTSAAEGRRLLARDDDTEMLTDTVQRVAVVATPIVRALARGARWLPRVPWVLVASTTASLVVTLRAGVGEVRVIGSLVAYRLERT
Ga0163163_113339851	3300014325	Switchgrass Rhizosphere	VATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPAL
Ga0157380_100677594	3300014326	Switchgrass Rhizosphere	VTTNVPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLVAYRLEQATGRPADPALVKQLTLELYL
Ga0157377_1000219911	3300014745	Miscanthus Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPR
Ga0157379_107175171	3300014968	Switchgrass Rhizosphere	VTTNAPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVL
Ga0132258_130956433	3300015371	Arabidopsis Rhizosphere	MTTNLPELREATLATHIPDPERDRRLLDAVGGLVDQVIDRILLSPERVTSAVEAKRLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVMTLRAGVREVRVLGSLLAHRLEQT
Ga0132258_133123001	3300015371	Arabidopsis Rhizosphere	MAVEQQPREASLATPLPSPGGPEHDRRLLDAVGGLFDQVVDRILLSPERVTSAAEGKRLIAADDDAEGLTDTLQRVAVIATPIVRMVARGARWLPRVPWVLVASTTASLVVTLRAGVHEVRVLGSFIAYRLEQATGRPADPALVKLLTLELYLSPGR
Ga0132256_1000907781	3300015372	Arabidopsis Rhizosphere	VTTNAPELREGTLATRLDDPGPDRDLRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRDPWVLVASTTASLVMTIRGGVHEVRVLGSLVAYRLEQATGRTA
Ga0132256_1001832463	3300015372	Arabidopsis Rhizosphere	MATKLPELPDGTLATRLPDREPDRDRRLQDAVGGLFDQLIDRILLSPDRVTSAAEGKRLIAQDDEAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRP
Ga0163161_104765891	3300017792	Switchgrass Rhizosphere	MATKLPEPREGTLATPLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLY
Ga0163161_113638791	3300017792	Switchgrass Rhizosphere	VTTNAPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLVAY
Ga0190270_131650261	3300018469	Soil	MTVNQQEPRDASLAVRVPDPEPEHDRRLLDAVGGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIIRTVARGSRFLRRVPWVLVASTTASLVVTLSAGV
Ga0190274_109056841	3300018476	Soil	MTVNEQDPREASLAVRVPDPEPEHDRRLLDAVGGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIIRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVREVRVLGSL
Ga0190271_111979401	3300018481	Soil	MTANQEKPHEASLAVRLPDPEPDDRRLLDAVGGLVDQVIDRILLSPDRVTSAAEGKRRMAGDDDTEAFTDTLQRIAVIATPIVRTVARGSRFLPKVPWVLVASTTASLVVTLSAGVREVRVIGSLLAYRRELATGRPADPELVKQLALALYLSPGRTPKLE
Ga0190271_123959081	3300018481	Soil	MTVNEQEPREASLAVRVPDPEPEHDRRLLDAVGGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRLAVIATPIIRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVREVRVLGSLIAHRLELATG
Ga0206354_109518901	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQELRVL
Ga0247786_10344892	3300022883	Soil	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTPSPTRDL
Ga0247766_11783952	3300022906	Plant Litter	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRL
Ga0247790_101352701	3300022915	Soil	MATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQ
Ga0247799_10068921	3300023072	Soil	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRL
Ga0247799_10895861	3300023072	Soil	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTPSPTGDLPL
Ga0247744_10382421	3300023073	Soil	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTPSPTGDL
Ga0247802_10590332	3300023077	Soil	MATKLPDLREGTLATRLSDPEPERDRTLLDAVGGLFDQLIDRILLSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVK
Ga0247754_11349952	3300023102	Soil	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTPSP
Ga0247776_101951661	3300023275	Plant Litter	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTP
Ga0210143_10978211	3300025792	Natural And Restored Wetlands	VSGAPEPREASLAIRLPDPGQGPEHDRRLIAAVSGLLDDLVSRVLLSPERVTTAAEGKRLMTADDDSEAFTDTLQRIAMIATPIVRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVRE
Ga0210113_10143284	3300025796	Natural And Restored Wetlands	VSGAPEPREATLAVRLPDPGQGPEHDRRLIAAVSGLLDDLVSRVLLSPERVTTAAEGKRLMTADDDSEAFTDTLQRIAMIATPIVRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVREVRVIGSLLAHRLEVATGRPPDPALVKQLAVELYLSPGRTPRLEA
Ga0207688_103050441	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDEAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVT
Ga0207654_107723271	3300025911	Corn Rhizosphere	MATKLPEPREGTLATPLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAEEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLAPRRTPSTTDALPL
Ga0207707_113708632	3300025912	Corn Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPAL
Ga0207649_114899591	3300025920	Corn Rhizosphere	VTTNAPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSL
Ga0207681_114836882	3300025923	Switchgrass Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSSERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGTRFLPRVPWVLVASTTANLVVTLRAGVQELRVLGSLVAHRLEQATGRPADPRLVKQLTLELYLGPKRTP
Ga0207650_109848481	3300025925	Switchgrass Rhizosphere	VATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETG
Ga0207659_106491092	3300025926	Miscanthus Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRLVKQLTLELYLGPK
Ga0207687_105853933	3300025927	Miscanthus Rhizosphere	MLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGIREVRVLGSLVAYRLEQETGRPADPALV
Ga0207690_108484802	3300025932	Corn Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYL
Ga0207690_115745041	3300025932	Corn Rhizosphere	MATKLPEPREGTLATPLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDEAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQE
Ga0207709_106647352	3300025935	Miscanthus Rhizosphere	VTTNAPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLVAYRLEQATGRPADPALVKQLTLELYLSPRRTPTLTGGLPLGKL
Ga0207670_118388091	3300025936	Switchgrass Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSL
Ga0207669_119620601	3300025937	Miscanthus Rhizosphere	LAVRVPDPEPEHDRRLFDAVGGLVDGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIVRTVARGSRWLPKVPWVLVASTTASLVVTLTAGVREVRVLGSLIAHRLELATGRPPDPALVKQLALELYLSPSRTPKLEDGLPLVRLVRRW
Ga0207661_102868921	3300025944	Corn Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVL
Ga0207661_107517823	3300025944	Corn Rhizosphere	MATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDEAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYR
Ga0207661_118028532	3300025944	Corn Rhizosphere	VATKLPEPHEGTLATRVPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVA
Ga0207661_120196331	3300025944	Corn Rhizosphere	MATKLPEPREGTLATPLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGS
Ga0207667_102400313	3300025949	Corn Rhizosphere	MATNLPELREGTLATPLPPTEPEGNRLLDAVAGLFDNVIDRILLSPERVTSAAEGKRLMSRDDDTEDMADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTANLVVTLRAGVQEVRVLGSLVAHRLEQATGRPADPRLVKQLTLELYLGPKRTPTLS
Ga0207640_109117511	3300025981	Corn Rhizosphere	MTARLPELHEGTVATRLSDPEPERDGKLLAAVGGLFDQLIDRILLSHERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTPSTTDAL
Ga0207678_101628883	3300026067	Corn Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALV
Ga0207676_117586262	3300026095	Switchgrass Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLSPRRTPS
Ga0207674_102598991	3300026116	Corn Rhizosphere	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLAP
Ga0207683_101225011	3300026121	Miscanthus Rhizosphere	VTTNVPEVREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLVAYRLEQAT
Ga0207582_10318922	3300026960	Soil	MATKLPELREGTLATRLSDPEPGRDRRLLDAVGGLFDQLIDRILVSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVA
Ga0268264_108135141	3300028381	Switchgrass Rhizosphere	VTTNVPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLVAYRLEQATGRPADPALVK
Ga0247822_108004022	3300028592	Soil	VKTNVPELREGTLATRLDDPSPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRGGVHEVRVLGSLVAYRLEQATGRPADPALVKQLTLELY
Ga0247822_119647861	3300028592	Soil	REATLAVRVPDPEPEHDRRLFDAVGGLVDGLVDQVVDRILLSPDRITSAAEGKRVMAGDDETEAFTDTLQRIAVIATPIVRTVARGSRWLPKVPWVLVASTTASLVVTLTAGVREVRVLGSLIAHRLELATGRPPDPALVKQLALELYLSPSRTPKLDDGLPLGRPP
Ga0307503_100710113	3300028802	Soil	VTTNVPEVREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRAGVHEV
Ga0247825_105683161	3300028812	Soil	MTTNQLEPREASLATRVPDPEPERDRNLVDAVGGLFDQVIDRILLSSDRVTSAGEGKRLMATDDDSEALTDTLQRIAVIATPIVRALAQGARWLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAHRLELTTGRPADPALVKQ
Ga0247826_100303344	3300030336	Soil	VTTNAPELREGTLATRLDDPGPDRDRRLLDAVAGLVDSVIDRILLSPTRVRSAAEGRGLIAVDDDSEDVADRVQRVAVIATPIVRTLARGSRLLPRVPWVLVASTTASLVMTIRG
Ga0247826_109164131	3300030336	Soil	MTVNEQEPRAASLAVRVPDPEPEHDRRLLDAVGGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIIRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVREVRVLGSLIAHRLELATGRPPDPGLVKQLALEVYLAPSK
Ga0310887_100512813	3300031547	Soil	MATKLPEPREGTLATPLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGR
Ga0310900_118903881	3300031908	Soil	MTVNEQEPREATLAVRVPDPEPEHDRRLFDAVGGLVDGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIVRTVARGSRWLPKVPWVLVASTTASLVVTLTAGVREVRVLGSLIAHRLELATGRPPDPALVKQLALELYL
Ga0310901_100204751	3300031940	Soil	MATKLPEPREGTLATPLSDPGPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLA
Ga0310885_102934282	3300031943	Soil	MTVNEQEPREATLAVRVPDPEPEHDRRLFDAVGGLVDGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIVRTVARGSRWLPKVPWVLVASTTAS
Ga0310884_107724621	3300031944	Soil	MATKLPEPREGTLATPLSDPGPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYR
Ga0308176_106629441	3300031996	Soil	MATELPEVREGTLATRLSDPEPERDRRLLDAVGGLFDQLIDRILLSPDRVTSAAEGKRLISLDDDAEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQ
Ga0307416_1037350891	3300032002	Rhizosphere	IGYTEGMHDRREPPEATLATRVPDPERDRTLLDAVGGLFDQVIDRVLRSPERVTSAAEGKRLLTADDDAEGLADMVQRVAVVATPVVRTLARGARWLPRVPWVLVASTSASLVVTLRAGVREVRVLGSLVAHRLEAATGQAADPALVKQLTLELYLSPSRTPKLQGGLPL
Ga0310890_110172281	3300032075	Soil	VATKPPEPREATLATRLPDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAAEGKRLIALDDDAEDVAERVQRVAVIATPIVRTIARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADPALVKRLTLSLYLS
Ga0310895_105909542	3300032122	Soil	MATKLPEPREGTLATPLSDPEPERDGRLLDAVGGLFDQLIDRILLSPERVTSAGEGKRLIALDDETEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLVVTLRAGVREVRVLGSLVAYRLEQETGRPADP
Ga0247830_105797722	3300033551	Soil	MTVNEQEPREATLAVRVPDPEPEHDRRLFDAVGGLVDGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIVRTVARGSRWLPKVPWVLVASTTASLVVTLTAGVREVRVLGSLIAHRLELATGRPPDPALVKQL
Ga0247830_111924611	3300033551	Soil	MTVNEQEPRAASLAVRVPDPEPEHDRRLLDAVGGLVDQVVDRILLSPDRITSAAEGKRVMAGDDDTEAFTDTLQRIAVIATPIIRTVARGSRFLPRVPWVLVASTTASLVVTLSAGVREVRVLGSLIAHRLELATGRPPDPGLVKQLALEVY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078340

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences