Metagenome / Metatranscriptome Family F078333

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F078333
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	50 residues
Representative Sequence	AAVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY
Number of Associated Samples	100
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.03 %
% of genes near scaffold ends (potentially truncated)	85.34 %
% of genes from short scaffolds (< 2000 bps)	89.66 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.103 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.207 % of family members)
Environment Ontology (ENVO)	Unclassified (21.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.79% β-sheet: 0.00% Coil/Unstructured: 59.21%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00196	GerE	2.59
PF01872	RibD_C	2.59
PF00106	adh_short	2.59
PF01894	UPF0047	1.72
PF11799	IMS_C	0.86
PF10041	DUF2277	0.86
PF13659	Obsolete Pfam Family	0.86
PF08031	BBE	0.86
PF03098	An_peroxidase	0.86
PF01757	Acyl_transf_3	0.86
PF04828	GFA	0.86
PF08402	TOBE_2	0.86
PF03575	Peptidase_S51	0.86
PF01548	DEDD_Tnp_IS110	0.86
PF08240	ADH_N	0.86
PF04073	tRNA_edit	0.86
PF02559	CarD_CdnL_TRCF	0.86
PF00300	His_Phos_1	0.86
PF00211	Guanylate_cyc	0.86
PF02350	Epimerase_2	0.86
PF00230	MIP	0.86
PF08940	DUF1918	0.86
PF04191	PEMT	0.86
PF02371	Transposase_20	0.86
PF13396	PLDc_N	0.86
PF01209	Ubie_methyltran	0.86
PF13646	HEAT_2	0.86
PF01546	Peptidase_M20	0.86
PF00583	Acetyltransf_1	0.86
PF13561	adh_short_C2	0.86
PF07452	CHRD	0.86
PF00072	Response_reg	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.59
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.59
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	1.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.72
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.86
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.86
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.86
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.86
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.03 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.00 %
Unclassified	root	N/A	6.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	56.90 %
Unclassified	root	N/A	6.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.45 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	52.59 %
Unclassified	root	N/A	6.90 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	52.59 %
Unclassified	root	N/A	6.90 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	2.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	52.59 %
Unclassified	root	N/A	6.90 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1299244	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig131254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
2166559005\|cont_contig41084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
2170459015\|G14TP7Y01BU37I	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300000956\|JGI10216J12902_111081472	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300000956\|JGI10216J12902_114881109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2008	Open in IMG/M
3300004633\|Ga0066395_10883363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005164\|Ga0066815_10034867	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300005329\|Ga0070683_101893132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	573	Open in IMG/M
3300005332\|Ga0066388_100011577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6984	Open in IMG/M
3300005332\|Ga0066388_108829438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005337\|Ga0070682_100107069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1856	Open in IMG/M
3300005364\|Ga0070673_101421363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300005447\|Ga0066689_10605721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300005456\|Ga0070678_101422131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	648	Open in IMG/M
3300005542\|Ga0070732_10995468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300005560\|Ga0066670_10558553	All Organisms → cellular organisms → Bacteria → Terrabacteria group	699	Open in IMG/M
3300005566\|Ga0066693_10465877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005764\|Ga0066903_100010522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8844	Open in IMG/M
3300005764\|Ga0066903_100077175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4317	Open in IMG/M
3300005764\|Ga0066903_100269983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2652	Open in IMG/M
3300005764\|Ga0066903_101528560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1262	Open in IMG/M
3300006028\|Ga0070717_11693624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	572	Open in IMG/M
3300006046\|Ga0066652_101517934	All Organisms → cellular organisms → Bacteria → Terrabacteria group	620	Open in IMG/M
3300006854\|Ga0075425_102539195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	567	Open in IMG/M
3300006880\|Ga0075429_100925548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300006904\|Ga0075424_101483728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300006954\|Ga0079219_10626852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300006954\|Ga0079219_12488344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300009012\|Ga0066710_101657308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	976	Open in IMG/M
3300009038\|Ga0099829_11658292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300009088\|Ga0099830_10692818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300009094\|Ga0111539_12517361	Not Available	597	Open in IMG/M
3300009147\|Ga0114129_10194584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2751	Open in IMG/M
3300010360\|Ga0126372_12709173	Not Available	548	Open in IMG/M
3300010375\|Ga0105239_10522200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1351	Open in IMG/M
3300010398\|Ga0126383_13133711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300010398\|Ga0126383_13483913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300011003\|Ga0138514_100144678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300012011\|Ga0120152_1010982	All Organisms → cellular organisms → Bacteria	3854	Open in IMG/M
3300012204\|Ga0137374_10861726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300012210\|Ga0137378_10995754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300012357\|Ga0137384_10942883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300012359\|Ga0137385_10297750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1389	Open in IMG/M
3300012519\|Ga0157352_1099818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300012951\|Ga0164300_10912157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300012961\|Ga0164302_11631020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300012971\|Ga0126369_13667272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300012989\|Ga0164305_11386979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300013768\|Ga0120155_1081082	All Organisms → cellular organisms → Bacteria → Terrabacteria group	921	Open in IMG/M
3300013772\|Ga0120158_10033422	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3875	Open in IMG/M
3300013772\|Ga0120158_10156133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1254	Open in IMG/M
3300013772\|Ga0120158_10247218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300014166\|Ga0134079_10390565	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300014968\|Ga0157379_11468922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300014969\|Ga0157376_12256201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300015265\|Ga0182005_1261957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300015356\|Ga0134073_10209977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300015357\|Ga0134072_10077399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300015371\|Ga0132258_10842260	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300015371\|Ga0132258_11001647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2111	Open in IMG/M
3300015372\|Ga0132256_101384416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300015373\|Ga0132257_102719731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300015374\|Ga0132255_105187759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300016357\|Ga0182032_11691884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300016371\|Ga0182034_11868379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300016404\|Ga0182037_10890129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300017656\|Ga0134112_10230951	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300017959\|Ga0187779_10007546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6300	Open in IMG/M
3300017959\|Ga0187779_10954997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300017961\|Ga0187778_10356859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300017973\|Ga0187780_11047542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300017974\|Ga0187777_11154182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300018032\|Ga0187788_10373441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300018032\|Ga0187788_10405093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300018032\|Ga0187788_10515924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300018058\|Ga0187766_10869692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300018060\|Ga0187765_10275223	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300018061\|Ga0184619_10303487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300018061\|Ga0184619_10364015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300018081\|Ga0184625_10192239	Not Available	1069	Open in IMG/M
3300018089\|Ga0187774_11442932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300018433\|Ga0066667_10018136	All Organisms → cellular organisms → Bacteria	3656	Open in IMG/M
3300019255\|Ga0184643_1107087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300019361\|Ga0173482_10192965	All Organisms → cellular organisms → Bacteria → Terrabacteria group	828	Open in IMG/M
3300019873\|Ga0193700_1043158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300019875\|Ga0193701_1030405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300019881\|Ga0193707_1071733	Not Available	1074	Open in IMG/M
3300021415\|Ga0193694_1046499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300025928\|Ga0207700_10482189	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300025929\|Ga0207664_10199642	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300025929\|Ga0207664_10490691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1099	Open in IMG/M
3300025933\|Ga0207706_11530072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300025939\|Ga0207665_11038615	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300025944\|Ga0207661_10668024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300026075\|Ga0207708_10879868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300026308\|Ga0209265_1157045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300027907\|Ga0207428_10286271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1222	Open in IMG/M
3300028819\|Ga0307296_10737945	Not Available	538	Open in IMG/M
3300028824\|Ga0307310_10168022	Not Available	1021	Open in IMG/M
3300028884\|Ga0307308_10094974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1418	Open in IMG/M
3300028885\|Ga0307304_10108788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300031421\|Ga0308194_10302698	Not Available	554	Open in IMG/M
3300031446\|Ga0170820_17304497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300031765\|Ga0318554_10639749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300031769\|Ga0318526_10380596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300031805\|Ga0318497_10458351	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031819\|Ga0318568_10405778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300031893\|Ga0318536_10279889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	847	Open in IMG/M
3300031962\|Ga0307479_11538044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300032008\|Ga0318562_10424155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300032089\|Ga0318525_10599450	Not Available	562	Open in IMG/M
3300032205\|Ga0307472_100736706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300032782\|Ga0335082_10393800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300032805\|Ga0335078_10398334	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300034817\|Ga0373948_0093729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.90%
Host-Associated	Host-Associated	16.38%
Engineered	Engineered	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.45%
Plants	Host-Associated → Plants	16.38%
Aquatic	Environmental → Aquatic	3.45%
Solid Waste	Engineered → Solid Waste	0.86%
Modeled	Engineered → Modeled	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.31%
Sediment	Environmental → Aquatic → Sediment	2.59%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.86%
Grass	Engineered → Solid Waste → Grass	0.86%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.59%
Loam	Environmental → Terrestrial → Soil → Loam	13.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.86%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.03%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.21%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_02329390	2124908045	Soil	STVREFAFQSRLGQWNTVEIYQTSTLEEALTKVNELPTIY
KansclcFeb2_02929420	2124908045	Soil	VPMNNHMVFAAVEADDMSTVREFAFQSRLGQWNTVEIYQTATLEEALTKVNELPTIY
cont_0084.00003270	2166559005	Simulated	LRPSKPTTWTVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYS
4PV_02502750	2170459015	Switchgrass, Maize And Mischanthus Litter	VEADDANAVREFAFQGRLGQWNTVEIFQTSTLEEALTRVQELETIY
JGI10216J12902_1110814721	3300000956	Soil	AVEADDMSTVREFAFQSRLGQWNTVEIYQTATLEEALTKVDELPTIY*
JGI10216J12902_1148811091	3300000956	Soil	LATHVPMNNHMVFAAVEADDMSTVREFAFQSRLGQWNTIEIYQVSTLDEALTKVNELPTIY*
Ga0066395_108833632	3300004633	Tropical Forest Soil	DMATVREFAFQSRLGQWNTIEIYQVATLEEALTKVNELPTIYA*
Ga0066815_100348671	3300005164	Soil	ADDMSTVREFAFQSRLGQWNTIEIYQTSTLEEALTKVTELPTIY*
Ga0070683_1018931321	3300005329	Corn Rhizosphere	GVNLLATYVPMNNHMVFAAVEAKDMDSVREFAFQSRLGQWNTLEIYQVSTLEEALTKINELPTIYK*
Ga0066388_10001157712	3300005332	Tropical Forest Soil	MNNHMVFAAVEADDMDSVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYG*
Ga0066388_1088294381	3300005332	Tropical Forest Soil	DSVREFTFQSRLGQWKTIEIYEVSTLGDALTKVNELPTIY*
Ga0070682_1001070693	3300005337	Corn Rhizosphere	PMNNHMVFAAVEAKDMDSVREFAFQSRLGQWNTLEIYQVSTLEEALTKINELPTIYK*
Ga0070673_1014213633	3300005364	Switchgrass Rhizosphere	VEADDMDTVREFAFQSRLGQWNTVEIYQTSTLEQALTKVNELPTIY*
Ga0066689_106057212	3300005447	Soil	QVFVAVEADDANAVREFAFQGRLGQWNTIEILQTSTLEEALTRVQELETIY*
Ga0070678_1014221311	3300005456	Miscanthus Rhizosphere	VPMNNHMVFAAVEADDMATVREFAFQSRLGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0070732_109954681	3300005542	Surface Soil	MTNHQVYVAVEADDANAVREFAFQGRLGQWNTIDIYQTSTLEEALTRVQELPTIY*
Ga0066670_105585531	3300005560	Soil	VREFAWQGRLSQWNTVEIYAVSTLEEALGRVQELPTVY*
Ga0066693_104658772	3300005566	Soil	MTSVREFAFQSGLCQWNTVETYQVSTLEEALTKINELPAI*
Ga0066903_1000105221	3300005764	Tropical Forest Soil	KLAATYVPMNNHMVFAAVEANDMASVREFAFQSRLGQWNTIDIYQVATLEEALTKVNELPTIYA*
Ga0066903_1000771754	3300005764	Tropical Forest Soil	VKVNATYVPMNNHMVFAAVEADDMKTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0066903_1002699832	3300005764	Tropical Forest Soil	MNNHQVYAAVEADDMGTVREFAFQSRLGQWNTIDIYQVATLEEALTKVNELPTIYG*
Ga0066903_1015285604	3300005764	Tropical Forest Soil	ATYVPMTNHQVYVAVEADDANAVREFAFQGRLGQWNTVEIFQTSTLEEALTRVQELPTIY
Ga0070717_116936242	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VREFAFQGRLSQWNTVEILQTSTLEEALGRVQEMEMIY*
Ga0066652_1015179342	3300006046	Soil	MVFVAVEADDADAVREFTFQGRLGQWNTIEIYQTSTLEEALTRVNELPTIY*
Ga0075425_1025391951	3300006854	Populus Rhizosphere	NHMVFAAVEADDMATVREFAFQSRLGQWNTIEIYQVSTLEEALTKVNELPTIYQ*
Ga0075429_1009255482	3300006880	Populus Rhizosphere	ATVREFAFQSRLGQWNTIDIYQVATLEEALTKASELPTIYG*
Ga0075424_1014837282	3300006904	Populus Rhizosphere	LGVKLLATYVPMNNHMVFAAVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0079219_106268524	3300006954	Agricultural Soil	DMSTVREFAWQPGSASDTVEIYQTATLEEALTKVNELPTIY*
Ga0079219_124883442	3300006954	Agricultural Soil	LLATYVPMNNHMVFVAVEADDMSTVREFAFQARLGQWNTVEIYQTSTLEEALTKVNDLPTIY*
Ga0066710_1016573081	3300009012	Grasslands Soil	DANSVREFAFQGRLGQWNTIEILQTSTLEEALTRVQELPTIY
Ga0099829_116582921	3300009038	Vadose Zone Soil	REFAFQGRLGQWNTIDIFQTSTLEEALTRVQELPTIY*
Ga0099830_106928181	3300009088	Vadose Zone Soil	FAFQGRLGQWNTIEIYQTSTLEEALTRVQELPTIY*
Ga0111539_125173612	3300009094	Populus Rhizosphere	IIVAVEADDANSVREFAWQGRLGQWNTVEIIQTVTFEEALTRVQELPTIF*
Ga0114129_101945841	3300009147	Populus Rhizosphere	TYVPMTNHQVFVAVEADDANAVREFTFQGRVSQWNTVDILQVSTLEEALARVQELPTVY*
Ga0126372_127091732	3300010360	Tropical Forest Soil	VPMTSHHIYAAVEAEDANSVREFAWQGRLAQWNKVEIFQTSTLEEALTRVQEMPAVY*
Ga0105239_105222002	3300010375	Corn Rhizosphere	FQSRLGQWNTIEIYQVSTLEEALTKVNELPTIYD*
Ga0126383_131337112	3300010398	Tropical Forest Soil	VREVARQGRLARWNKVEFFQTSSLEEALTRVQELPAVF*
Ga0126383_134839132	3300010398	Tropical Forest Soil	VEAGDMDAVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYG*
Ga0138514_1001446781	3300011003	Soil	VLVAVEANDANSVREFAFQGRLGQWNTVEILQTSTLEEALTRVQELETIY*
Ga0120152_10109826	3300012011	Permafrost	DKVREFTFQGRLSQWNTCEIYQTSTLEEALTRVQELPTVF*
Ga0137374_108617263	3300012204	Vadose Zone Soil	GVKILATYVPMTNHQVFVAVEADDANSVREFAFQGRLGQWNTVEILQTSTLEEALTRVQELPTIY*
Ga0137378_109957541	3300012210	Vadose Zone Soil	MNNHMVFAAVEADDMSTVREFAWQSRLGQWNTVEIYQTATLEEALTKVNELPTIY*
Ga0137384_109428832	3300012357	Vadose Zone Soil	ADDADAVREFTFQGRLGQWNTIEIYQTSTLEEALTRVEELPTIY*
Ga0137385_102977502	3300012359	Vadose Zone Soil	PMTNHQVFVAVEADDANAVREFAFQGRLGQWNTVEILQTSTLEEALTRVQELETIY*
Ga0157352_10998181	3300012519	Unplanted Soil	NHMVFAAVEADDANSVREFAFQSRLSQWNTIEIYQTSTLEEALTKVNELPTIY*
Ga0164300_109121573	3300012951	Soil	AVEADDMATVREFAFQSRLGQWNTIEIYQTSTLEEALTKVNELPAIY*
Ga0164302_116310201	3300012961	Soil	MTNHHVFVAVEADDANSVREFAFQGRLGQWNTIEIRQVSTLEEALTRVQELPTIY*
Ga0126369_136672721	3300012971	Tropical Forest Soil	AAVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0164305_113869792	3300012989	Soil	VEGDDMATVREFAFQARLSQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0120155_10810821	3300013768	Permafrost	VREFAFQGRLGQWNTIEIYQTSTLEEALTRVQELPTIY
Ga0120158_100334225	3300013772	Permafrost	VREFAFQGRLGQWNTIEIYQTSTLEEALTRVQELPTIY*
Ga0120158_101561332	3300013772	Permafrost	MNNHMVFAAVEGDDMATVREFAFQSRLGQWNTIDIYQVATLEEALTKVNELPTIYA*
Ga0120158_102472183	3300013772	Permafrost	EADDADKVREFTFQGRLSQWNTVEIYQTSTLEEALTRVQELPTIF*
Ga0134079_103905651	3300014166	Grasslands Soil	ADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYG*
Ga0157379_114689221	3300014968	Switchgrass Rhizosphere	DMATVREFAFQSRFGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0157376_122562011	3300014969	Miscanthus Rhizosphere	HMVVAAVEADDMDKVREFAFQGRLSQWNTVEIYQTSTLEEALGRVQELPTIY*
Ga0182005_12619572	3300015265	Rhizosphere	ATYVPMNNHMVFAAVEADDMATVREFAFQSRLGQWNTVEIYQTSTLEEALTKVNELPTIY
Ga0134073_102099771	3300015356	Grasslands Soil	VEAEDMATVREFAFQSRLGQWNTIEIYQTSTLEEALTKVNDLPTIY*
Ga0134072_100773991	3300015357	Grasslands Soil	MVFAAVEAEDMATVREFAFQSRLGQWNTIEIYQTSTLEEALTKVNDLPTIY*
Ga0132258_108422602	3300015371	Arabidopsis Rhizosphere	MNNHMVFAAVEADDMATVREFAFQSRFGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0132258_110016475	3300015371	Arabidopsis Rhizosphere	FAAVEADDMATVREFAFQSRLGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0132256_1013844161	3300015372	Arabidopsis Rhizosphere	MTNHMVVAAVEADDMDKVREFAFQGRLSQWNTVEIYQTSTLEDALTRVQELPTIY*
Ga0132257_1027197312	3300015373	Arabidopsis Rhizosphere	VEADDMATVREFAFQSRLGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0132255_1051877593	3300015374	Arabidopsis Rhizosphere	VEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0182032_116918841	3300016357	Soil	PMNNHMVFAAVEADDMASVREFAFQSRLGQWNTIEIYQVSTLEEALTKINELPTIYQ
Ga0182034_118683791	3300016371	Soil	NNHMVFVAVEADDMATVREFAFQARLGQWNTVEIYQVSTLEEALTKVNELPTIY
Ga0182037_108901292	3300016404	Soil	LSATYVPMNNHMVFAAVEADDMASVREFAFQSRLGQWNTIEIYQVSTLEEALTKINELPTIYQ
Ga0134112_102309512	3300017656	Grasslands Soil	TYVPMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALMKVTELPTIYG
Ga0187779_100075461	3300017959	Tropical Peatland	ATYVPMNNHMVFVAVEADDMNTVREFAFQSRLGQWNTVDIYQVSTLEEALTKVNELPTIY
Ga0187779_109549971	3300017959	Tropical Peatland	DMSSVREFVFQSRLGQWNTLDIYQVSTLEEALTKVTELPTIY
Ga0187778_103568591	3300017961	Tropical Peatland	ANDMDTVREFAFQSRLGQWNTLELYQVSTLEEALTKVEELPTIYS
Ga0187780_110475422	3300017973	Tropical Peatland	DDMNTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY
Ga0187777_111541821	3300017974	Tropical Peatland	MDTVREFAFQSRLGQWNTLELYQVSTLEEALTKVEELPTIYG
Ga0187788_103734412	3300018032	Tropical Peatland	MNNHMVFAAVEANDMDSVREFAFQSRLGQWNTLKIYQVSTLEEALTKINDLPTIYK
Ga0187788_104050932	3300018032	Tropical Peatland	VAVEADDANQVREFTFQGRLSQWNTVEIYQTSTLEEALTRVQELPTIY
Ga0187788_105159241	3300018032	Tropical Peatland	LLATYVPMNNHMVFAAVEADDMASVREFAFQSRLGQWNTIEIYQVSTLEEALTKVNELPTIYE
Ga0187766_108696921	3300018058	Tropical Peatland	PMNNHMVFAAVEADDMDTVREFAFQSRLGQWNTVEIYQVSTLEEALTKVNELPTIY
Ga0187765_102752233	3300018060	Tropical Peatland	KLLATYVPMNNHMVFAAVEADDMDTVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYG
Ga0184619_103034871	3300018061	Groundwater Sediment	QVFVAVEADDANAVREFAFQGRLGQWNTIDILQTSTLEEALTRVQELETIY
Ga0184619_103640152	3300018061	Groundwater Sediment	EADDADSVRELAFQGRLSQWNTVEIYQTSTLEEALGRVQEMPMIY
Ga0184625_101922392	3300018081	Groundwater Sediment	VPMINHMVYVAVEADDADAVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQEMPMVY
Ga0187774_114429321	3300018089	Tropical Peatland	DDMDSVREFAFQARLGQWNTLEIYQVSTLEEALTRVNELPPIY
Ga0066667_100181366	3300018433	Grasslands Soil	VFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYG
Ga0184643_11070871	3300019255	Groundwater Sediment	FAFQGRLGQWNTIEILQVSTLEEALTRVQELPTIY
Ga0173482_101929651	3300019361	Soil	PMNNHMVFAAVEADDMASVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYS
Ga0193700_10431582	3300019873	Soil	VRELAIQGRLAQWNTVEVHQTSTLEEALTRVQDMPMVY
Ga0193701_10304051	3300019875	Soil	VPMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEDALAKVTELPTIYS
Ga0193707_10717331	3300019881	Soil	RELAIQGRLAQWNTVEVHQTSTLEEALTRVQEMPMVY
Ga0193694_10464991	3300021415	Soil	DDADAVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQDMPMVY
Ga0207700_104821893	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	FAFLGRLSQWNTVEIYQTSTLEEALTRIQELPTIY
Ga0207664_101996421	3300025929	Agricultural Soil	VRELAFQGRLSQWNTVDILQTSTLEEALGRAQELPTIY
Ga0207664_104906914	3300025929	Agricultural Soil	EADDMDKVREFAFQGRLSQWNTVEIYQTSTLEEALGRVQELPTIY
Ga0207706_115300722	3300025933	Corn Rhizosphere	MLAFRAAVEAKDMDSVREFAFQSRLGQWNTLEIYQVSTLEEALTKINELPTIYK
Ga0207665_110386152	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VVFAAVEADSVDAVREFTFQGRLTQWNTVEIYRTSSLEEALTRVQELPTLY
Ga0207661_106680241	3300025944	Corn Rhizosphere	VKLLATYVPMNNHMVFAAVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY
Ga0207708_108798682	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DMDKVREFAFQGRLSQWNTVEIYQTSTLEEALTRVQELPTIY
Ga0209265_11570451	3300026308	Soil	GVKLLATYVPMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYG
Ga0207428_102862711	3300027907	Populus Rhizosphere	EADDANSVREFAWQGRLGQWNTVEIIQTVTFEEALTRVQELPTIF
Ga0307296_107379451	3300028819	Soil	YVAVEADDADAVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQDMPMVY
Ga0307310_101680222	3300028824	Soil	VFAAVEADDMDSVREFAFQSRLGQWNTLDLYQVSTLEEALTKVTELPTIYG
Ga0307308_100949743	3300028884	Soil	KLLATYVPMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYG
Ga0307304_101087881	3300028885	Soil	NNHMVFAAVEADDMDSVREFAFQSRLGQWNTLDLYQVSTLEEALTKVTELPTIYG
Ga0308194_103026982	3300031421	Soil	VEADDADAVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQEMPMVY
Ga0170820_173044971	3300031446	Forest Soil	LTATYVPMNNHMVFAAVEADDMATVREFAFQSRLGQWNTIDIYQVATLEEALTKVNELPTIYA
Ga0318554_106397492	3300031765	Soil	LATYVPMTNHHVYAAVEADDADAVREFAWQGRLAQWNTVEIMQVSTLEEALVRVQEMPAI
Ga0318526_103805962	3300031769	Soil	FAAVEADDANAVREFAFQARLGQWNTIEIYQVSTLEEALVRVHELPTIYS
Ga0318497_104583511	3300031805	Soil	DAVREFAWQGRLAQWNTVEIMQVSTLEEALVRVQEMPAIY
Ga0318568_104057781	3300031819	Soil	ADDANSVREFSFQGRLGQWNTIEIYQVSTLEEALTKVNELPTIY
Ga0318536_102798892	3300031893	Soil	MQYLMVFAAVEADDMSTVREFAFQSRLGQWNTIEIYQVSTLEEALTKVNELPTIY
Ga0307479_115380441	3300031962	Hardwood Forest Soil	EAPDANAVREFAFQGRLGQWNTIDILQTSTLEEALTRVQELPTIY
Ga0318562_104241552	3300032008	Soil	VREFSFQGRLGQWNTIEIYQVSTLEEALTKVQELPTEY
Ga0318525_105994502	3300032089	Soil	NHHVYAAVEADDADAVREFAWQGRLAQWNTVEIMQVSTLEEALTRVQEIPAIY
Ga0307472_1007367061	3300032205	Hardwood Forest Soil	LATYVPMTNHMVVAAVEADDMDKVREFAFQGRLSQWNTVEIYQTSTLEEALGRVQELPTI
Ga0335082_103938001	3300032782	Soil	MVFAAVEANDMDAVREFAFQSRLGQWNTLELYQVSTLEESMAKVEELPTIYG
Ga0335078_103983341	3300032805	Soil	ADDMDTVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYG
Ga0373948_0093729_2_124	3300034817	Rhizosphere Soil	DKVREFAFQGRLSQWNTVEIYQTSTLEEALGRVQELPTIY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078333

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences