Metagenome / Metatranscriptome Family F078233

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078233
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	71 residues
Representative Sequence	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Number of Associated Samples	88
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.00 %
% of genes near scaffold ends (potentially truncated)	56.90 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.483 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (64.655 % of family members)
Environment Ontology (ENVO)	Unclassified (65.517 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.414 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.79% β-sheet: 0.00% Coil/Unstructured: 35.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13385	Laminin_G_3	10.34
PF00724	Oxidored_FMN	1.72
PF04542	Sigma70_r2	1.72

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	1.72
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.72
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	1.72
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
All Organisms	root	All Organisms	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
cellular organisms	root	All Organisms → cellular organisms	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	38.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	38.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	23.28 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	6.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Verrucomicrobia bacterium TMED175	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	23.28 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	6.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Verrucomicrobia bacterium TMED175	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	23.28 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	6.03 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10202189	Not Available	610	Open in IMG/M
3300001347\|JGI20156J14371_10045919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1909	Open in IMG/M
3300001352\|JGI20157J14317_10204042	Not Available	562	Open in IMG/M
3300001354\|JGI20155J14468_10202069	Not Available	597	Open in IMG/M
3300001846\|ACM22_1078370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	2186	Open in IMG/M
3300003474\|NAP4_1001318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3777	Open in IMG/M
3300005837\|Ga0078893_13058471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	777	Open in IMG/M
3300007655\|Ga0102825_1020079	Not Available	1368	Open in IMG/M
3300009000\|Ga0102960_1332103	Not Available	536	Open in IMG/M
3300009077\|Ga0115552_1269179	Not Available	684	Open in IMG/M
3300009077\|Ga0115552_1335060	Not Available	601	Open in IMG/M
3300009086\|Ga0102812_10772020	Not Available	532	Open in IMG/M
3300009434\|Ga0115562_1152573	Not Available	860	Open in IMG/M
3300009438\|Ga0115559_1058460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1624	Open in IMG/M
3300009438\|Ga0115559_1131061	Not Available	948	Open in IMG/M
3300009442\|Ga0115563_1167841	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	867	Open in IMG/M
3300009443\|Ga0115557_1201243	Not Available	780	Open in IMG/M
3300009447\|Ga0115560_1048450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1891	Open in IMG/M
3300009447\|Ga0115560_1134934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	988	Open in IMG/M
3300009495\|Ga0115571_1009434	All Organisms → cellular organisms → Bacteria	5467	Open in IMG/M
3300009496\|Ga0115570_10177063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	978	Open in IMG/M
3300009498\|Ga0115568_10207712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	900	Open in IMG/M
3300009505\|Ga0115564_10173520	Not Available	1141	Open in IMG/M
3300009507\|Ga0115572_10010803	All Organisms → cellular organisms → Bacteria	6689	Open in IMG/M
3300009507\|Ga0115572_10677317	Not Available	563	Open in IMG/M
3300009508\|Ga0115567_10148108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	1564	Open in IMG/M
3300016747\|Ga0182078_10909448	Not Available	738	Open in IMG/M
3300016749\|Ga0182053_1451902	Not Available	1134	Open in IMG/M
3300017818\|Ga0181565_10075715	Not Available	2403	Open in IMG/M
3300017818\|Ga0181565_10099283	Not Available	2065	Open in IMG/M
3300017818\|Ga0181565_10428912	Not Available	868	Open in IMG/M
3300017824\|Ga0181552_10267052	Not Available	855	Open in IMG/M
3300017949\|Ga0181584_10442514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	808	Open in IMG/M
3300017949\|Ga0181584_10625386	Not Available	650	Open in IMG/M
3300017950\|Ga0181607_10706805	Not Available	523	Open in IMG/M
3300017951\|Ga0181577_10178311	Not Available	1431	Open in IMG/M
3300017951\|Ga0181577_10565410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	704	Open in IMG/M
3300017952\|Ga0181583_10398461	Not Available	857	Open in IMG/M
3300017956\|Ga0181580_10085520	Not Available	2331	Open in IMG/M
3300017956\|Ga0181580_10136973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1763	Open in IMG/M
3300017956\|Ga0181580_10162933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1589	Open in IMG/M
3300017956\|Ga0181580_10883536	Not Available	558	Open in IMG/M
3300017957\|Ga0181571_10117089	Not Available	1781	Open in IMG/M
3300017957\|Ga0181571_10478215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	763	Open in IMG/M
3300017957\|Ga0181571_10657993	Not Available	629	Open in IMG/M
3300017958\|Ga0181582_10570478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	696	Open in IMG/M
3300017958\|Ga0181582_10780332	Not Available	570	Open in IMG/M
3300017958\|Ga0181582_10945732	Not Available	503	Open in IMG/M
3300017962\|Ga0181581_10507623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	744	Open in IMG/M
3300017964\|Ga0181589_10421574	Not Available	876	Open in IMG/M
3300017964\|Ga0181589_10989861	Not Available	510	Open in IMG/M
3300017968\|Ga0181587_10957914	Not Available	527	Open in IMG/M
3300017969\|Ga0181585_10783275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	618	Open in IMG/M
3300017986\|Ga0181569_10209393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	1370	Open in IMG/M
3300018036\|Ga0181600_10457480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	611	Open in IMG/M
3300018039\|Ga0181579_10158301	Not Available	1361	Open in IMG/M
3300018041\|Ga0181601_10523239	Not Available	615	Open in IMG/M
3300018048\|Ga0181606_10412464	Not Available	720	Open in IMG/M
3300018048\|Ga0181606_10703064	Not Available	511	Open in IMG/M
3300018049\|Ga0181572_10364077	Not Available	909	Open in IMG/M
3300018413\|Ga0181560_10208661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	948	Open in IMG/M
3300018413\|Ga0181560_10530548	Not Available	534	Open in IMG/M
3300018416\|Ga0181553_10041714	Not Available	3123	Open in IMG/M
3300018416\|Ga0181553_10647942	Not Available	555	Open in IMG/M
3300018417\|Ga0181558_10098490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	1823	Open in IMG/M
3300018417\|Ga0181558_10107256	Not Available	1725	Open in IMG/M
3300018417\|Ga0181558_10158571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1336	Open in IMG/M
3300018417\|Ga0181558_10271495	Not Available	937	Open in IMG/M
3300018423\|Ga0181593_11005221	Not Available	572	Open in IMG/M
3300018423\|Ga0181593_11081779	Not Available	546	Open in IMG/M
3300018424\|Ga0181591_10379767	Not Available	1057	Open in IMG/M
3300018426\|Ga0181566_10851700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	620	Open in IMG/M
3300018876\|Ga0181564_10428872	Not Available	716	Open in IMG/M
3300020051\|Ga0181555_1054329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	2000	Open in IMG/M
3300020054\|Ga0181594_10242689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	862	Open in IMG/M
3300020166\|Ga0206128_1073718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1559	Open in IMG/M
3300020173\|Ga0181602_10390512	Not Available	548	Open in IMG/M
3300020174\|Ga0181603_10028340	Not Available	3147	Open in IMG/M
3300020174\|Ga0181603_10234913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	739	Open in IMG/M
3300020176\|Ga0181556_1196481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	774	Open in IMG/M
3300020177\|Ga0181596_10185763	Not Available	922	Open in IMG/M
3300020178\|Ga0181599_1092312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	1382	Open in IMG/M
3300020182\|Ga0206129_10151855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	1095	Open in IMG/M
3300020185\|Ga0206131_10430749	Not Available	540	Open in IMG/M
3300020188\|Ga0181605_10074267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	1806	Open in IMG/M
3300020188\|Ga0181605_10179594	Not Available	974	Open in IMG/M
3300020189\|Ga0181578_10049155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2681	Open in IMG/M
3300020189\|Ga0181578_10158222	Not Available	1180	Open in IMG/M
3300020194\|Ga0181597_10365230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	619	Open in IMG/M
3300020194\|Ga0181597_10456978	Not Available	521	Open in IMG/M
3300020595\|Ga0206126_10399119	Not Available	606	Open in IMG/M
3300020810\|Ga0181598_1284623	Not Available	593	Open in IMG/M
3300021356\|Ga0213858_10575570	Not Available	514	Open in IMG/M
3300021364\|Ga0213859_10097666	Not Available	1393	Open in IMG/M
3300021371\|Ga0213863_10015562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	4523	Open in IMG/M
3300021389\|Ga0213868_10165099	Not Available	1357	Open in IMG/M
3300022909\|Ga0255755_1044547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	2241	Open in IMG/M
3300022922\|Ga0255779_1085188	Not Available	1756	Open in IMG/M
3300022925\|Ga0255773_10132798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	1239	Open in IMG/M
3300022927\|Ga0255769_10326490	Not Available	612	Open in IMG/M
3300022928\|Ga0255758_10059792	Not Available	2185	Open in IMG/M
3300022929\|Ga0255752_10099147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	1590	Open in IMG/M
3300022935\|Ga0255780_10027819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4017	Open in IMG/M
3300022935\|Ga0255780_10427398	Not Available	579	Open in IMG/M
3300023087\|Ga0255774_10440080	Not Available	574	Open in IMG/M
3300023105\|Ga0255782_10378748	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	639	Open in IMG/M
3300023172\|Ga0255766_10499512	Not Available	560	Open in IMG/M
3300023175\|Ga0255777_10284448	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	944	Open in IMG/M
3300023176\|Ga0255772_10053019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2804	Open in IMG/M
3300024346\|Ga0244775_11199727	Not Available	591	Open in IMG/M
3300025637\|Ga0209197_1082609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED175	990	Open in IMG/M
3300025654\|Ga0209196_1204173	Not Available	511	Open in IMG/M
3300025880\|Ga0209534_10197504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1010	Open in IMG/M
3300025894\|Ga0209335_10351262	Not Available	611	Open in IMG/M
3300031774\|Ga0315331_10763904	Not Available	677	Open in IMG/M
3300032073\|Ga0315315_10443241	Not Available	1206	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.14%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.86%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	68.10%
Pelagic	Environmental → Aquatic → Marine → Pelagic	18.97%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.03%
Coastal	Environmental → Aquatic → Marine → Coastal	4.31%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.86%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.86%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	64.66%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	18.97%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.03%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.72%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.72%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	64.66%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	15.52%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.31%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.45%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	3.45%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.72%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.72%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.86%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.86%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.86%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.86%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	0.86%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001846	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM22, ROCA_DNA119_0.2um_25b	Environmental	Open in IMG/M
3300003474	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020054	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022922	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025654	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_102021892	3300000117	Marine	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE*
JGI20156J14371_100459191	3300001347	Pelagic Marine	MKDNSEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
JGI20157J14317_102040421	3300001352	Pelagic Marine	MKVNQEEKEFITLTKAARLLGYTSSQIINRLINEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE
JGI20155J14468_102020691	3300001354	Pelagic Marine	MKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLS
ACM22_10783703	3300001846	Marine Plankton	MKDNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQ
NAP4_10013182	3300003474	Estuarine	MKVNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLVQLSVSKDSVDSE*
Ga0078893_130584711	3300005837	Marine Surface Water	MKVNQEEKQFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLVQLSVSKDSVDSE*
Ga0102825_10200791	3300007655	Estuarine	MKDNFEEKSFITFTKAARLLGYTSSQIINRLIDEKHLQGYSFPDCSTRKVCRNEVLNLIKLSVSKDSEDKE*
Ga0102960_13321031	3300009000	Pond Water	DVLMKDNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE*
Ga0115552_12691791	3300009077	Pelagic Marine	MKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE*
Ga0115552_13350601	3300009077	Pelagic Marine	MKVNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLS
Ga0102812_107720201	3300009086	Estuarine	MKDNFEEKRLITFTKAARLLGYTSSQIINRLIDEKHLQGYSFPDCSTRKVCRNEVLNLIKLSVSKDSED
Ga0115562_11525731	3300009434	Pelagic Marine	MKVNQEEKEFITFTKAARLLGYTSSQIINRLINEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE*
Ga0115559_10584602	3300009438	Pelagic Marine	VKGGLPLFKLTAAVLMKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
Ga0115559_11310611	3300009438	Pelagic Marine	MKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
Ga0115563_11678411	3300009442	Pelagic Marine	KLTADVLMKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
Ga0115557_12012431	3300009443	Pelagic Marine	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
Ga0115560_10484502	3300009447	Pelagic Marine	VLMKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
Ga0115560_11349342	3300009447	Pelagic Marine	VLMKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE*
Ga0115571_10094342	3300009495	Pelagic Marine	MKVNQEEKEFITFSKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIHLSVSKDSVDSE*
Ga0115570_101770631	3300009496	Pelagic Marine	KSGVKGGHPLFKLTADVLMKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE*
Ga0115568_102077121	3300009498	Pelagic Marine	KEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
Ga0115564_101735205	3300009505	Pelagic Marine	MKVNQEEKEFITLTKAARLLGYTSSQIINRLINEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE*
Ga0115572_1001080310	3300009507	Pelagic Marine	MKVNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHRKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE*
Ga0115572_106773171	3300009507	Pelagic Marine	HQKSGVKGGLPLFKLTAAVLMKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
Ga0115567_101481085	3300009508	Pelagic Marine	MKVNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE*
Ga0182078_109094481	3300016747	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0182053_14519025	3300016749	Salt Marsh	MIENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQ
Ga0181565_100757156	3300017818	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKD
Ga0181565_100992836	3300017818	Salt Marsh	MIENSKVKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKD
Ga0181565_104289121	3300017818	Salt Marsh	MLLVKDNQNEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEKQE
Ga0181552_102670522	3300017824	Salt Marsh	MKDNQNEKEFITFTKAARLLGYTSSQIINRLIEEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181584_104425142	3300017949	Salt Marsh	SKEKEFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181584_106253862	3300017949	Salt Marsh	MKDNPKEKEFITFTKAARLLGYTSSQIINRLIEEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181607_107068052	3300017950	Salt Marsh	FTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181577_101783115	3300017951	Salt Marsh	MNDNPNEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181577_105654101	3300017951	Salt Marsh	KEKEFITFTKAARLLGYISSQIINRLIEKKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKESEDQE
Ga0181583_103984612	3300017952	Salt Marsh	MKENSKEKKFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181580_100855201	3300017956	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDISTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181580_101369731	3300017956	Salt Marsh	DILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181580_101629332	3300017956	Salt Marsh	MKDNPKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181580_108835362	3300017956	Salt Marsh	LAPPPKSGVKGGHLFFKLTADILMKENSKEKKFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181571_101170891	3300017957	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181571_104782152	3300017957	Salt Marsh	EFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSNRKVCRHEVLSLIQLSVSKDSEVQE
Ga0181571_106579931	3300017957	Salt Marsh	MKDNQNEKEFITFTKAARLLGYTSSQIINRLIEEKHLKAYSFPDSSTRKVCPHEVLSLIQLSVPKDSEDQE
Ga0181582_105704781	3300017958	Salt Marsh	IFISFMKDNQNEKEFITFTKAARLLGYTSSQIINRLIEEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181582_107803321	3300017958	Salt Marsh	ALAPPPKSGVKDDHPFFKLTADILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSNRKVCRHEVLSLIQLSVSKDSEVQE
Ga0181582_109457321	3300017958	Salt Marsh	FITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181581_105076231	3300017962	Salt Marsh	EKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181589_104215742	3300017964	Salt Marsh	MKDNPKEKEFITFTKAARLLGYTSSQIINRLVEEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181589_109898611	3300017964	Salt Marsh	EKKFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181587_109579141	3300017968	Salt Marsh	KENSKEKEFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181585_107832751	3300017969	Salt Marsh	KEKEFITFTKAARLLGYTSSQIINRLIDEKHLKASSFPDSSTRKVCRHEVLSLIQLSVSKDSEVQE
Ga0181569_102093933	3300017986	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSARKVCRHEVLSLIQLSVSKDSEDQE
Ga0181600_104574801	3300018036	Salt Marsh	TKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181579_101583015	3300018039	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEVQE
Ga0181601_105232392	3300018041	Salt Marsh	MKDNPKEKEFITFTKAARLLGYISSQIINRLIEEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181606_104124642	3300018048	Salt Marsh	MKDNPKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEKQE
Ga0181606_107030641	3300018048	Salt Marsh	ILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181572_103640771	3300018049	Salt Marsh	MKDNPKEKEFITFTKAARLLGYISSQIINRLIEKKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181560_102086612	3300018413	Salt Marsh	MKDNPKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEVQE
Ga0181560_105305481	3300018413	Salt Marsh	LTADILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181553_100417141	3300018416	Salt Marsh	MKDNPKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLI
Ga0181553_106479421	3300018416	Salt Marsh	TFTKAARLLGYTSSQIINRLIEETHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181558_100984904	3300018417	Salt Marsh	MKDNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181558_101072563	3300018417	Salt Marsh	MKEYQEPKEFITFIKAARLLGYSSSHIINRLIEQNHLKAYSFPDTSARKVCRKEVLSLVQLKVSKEIKPQG
Ga0181558_101585712	3300018417	Salt Marsh	FKLTADILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLTAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181558_102714951	3300018417	Salt Marsh	MKDNQNEKEFITFTKAARLLGYTSSQIINRLIEEKHLKAFSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181593_110052211	3300018423	Salt Marsh	ILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLTAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181593_110817791	3300018423	Salt Marsh	LTVHILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181591_103797673	3300018424	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSNRKVCRHEVLSLIQLSVSKDSEVQE
Ga0181566_108517001	3300018426	Salt Marsh	FITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDSEDQE
Ga0181564_104288723	3300018876	Salt Marsh	MKENSKEKKFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSESKDREDQE
Ga0181555_10543292	3300020051	Salt Marsh	MIENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181594_102426891	3300020054	Salt Marsh	PNEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0206128_10737182	3300020166	Seawater	MKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE
Ga0181602_103905121	3300020173	Salt Marsh	LLFKLTAHILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181603_100283401	3300020174	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLTAYSFPDSSTRKVCRHEVLSLIQLSVSK
Ga0181603_102349131	3300020174	Salt Marsh	ITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEVQ
Ga0181556_11964811	3300020176	Salt Marsh	PFFKPFEDILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181596_101857633	3300020177	Salt Marsh	MKDNQNEKEFITFTKAARLLGYTSSQIINRLIEEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEVQE
Ga0181599_10923122	3300020178	Salt Marsh	MKDIPKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEKQE
Ga0206129_101518552	3300020182	Seawater	MKDHSEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0206131_104307491	3300020185	Seawater	KVNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLVQLSVSKDSVDSE
Ga0181605_100742672	3300020188	Salt Marsh	MKDNPKEKEFITFTKAASLLGYTSSQIINRLIDEKHLKAYSFPDSSIRKVCRHEVLSLIQLSVSKDSEVQE
Ga0181605_101795944	3300020188	Salt Marsh	MKDNQNEKEFITFTKAARLLGYTSSQIINRLIEEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVPKDS
Ga0181578_100491552	3300020189	Salt Marsh	KGGHLLFKLTADILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLTAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0181578_101582225	3300020189	Salt Marsh	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181597_103652301	3300020194	Salt Marsh	IWMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0181597_104569781	3300020194	Salt Marsh	HLFFKLTADILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0206126_103991191	3300020595	Seawater	QKSGVKGGHPLFKLTADVLMKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE
Ga0181598_12846231	3300020810	Salt Marsh	QKSGVKGGHLFFKLTADILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0213858_105755701	3300021356	Seawater	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDS
Ga0213859_100976663	3300021364	Seawater	MKEYQEPKEFITFIKAARLLGYSSSHIINRLIEQNHLKAYSFPDTSTRKVCRKEVLSLVQLKVSKEIKPQG
Ga0213863_100155625	3300021371	Seawater	MKVNQEEKEFITLTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSK
Ga0213868_101650995	3300021389	Seawater	MKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSVDSE
Ga0255755_10445472	3300022909	Salt Marsh	KEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0255779_10851885	3300022922	Salt Marsh	MIENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHQVLSLIQLSVPKESEDQE
Ga0255773_101327981	3300022925	Salt Marsh	KKPALAPPQKSGVKGGHLFFKLTADILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0255769_103264901	3300022927	Salt Marsh	YILIFISFMKDNQNEKEFITFTKAARLLGYTSSQIINRLIEEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEVQE
Ga0255758_100597926	3300022928	Salt Marsh	MNDNPNEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHQVLSLIQLSVPKESEDQE
Ga0255752_100991471	3300022929	Salt Marsh	FEDILMKDNPKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEVQE
Ga0255780_100278191	3300022935	Salt Marsh	TFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0255780_104273981	3300022935	Salt Marsh	LAPPQKSGVKGGHLFFKLTADILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0255774_104400801	3300023087	Salt Marsh	MKDNQNEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSK
Ga0255782_103787482	3300023105	Salt Marsh	NSKEKKFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0255766_104995121	3300023172	Salt Marsh	HNPNEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0255777_102844481	3300023175	Salt Marsh	FEDILMKENSKEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0255772_100530192	3300023176	Salt Marsh	DILMKENSKEKKFITFTKAARLLGYTSSQIINRLIDEKYLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDREDQE
Ga0244775_111997271	3300024346	Estuarine	MKDNFEEKRFITFTKAARLLGYTSSQIINRLIDEKHLQGYSFPDCSTRKVCRNEVLNLIKLSVSKDSEDKE
Ga0209197_10826092	3300025637	Pelagic Marine	MKVNQEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0209196_12041731	3300025654	Pelagic Marine	TKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0209534_101975042	3300025880	Pelagic Marine	SEEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0209335_103512621	3300025894	Pelagic Marine	HPLFKLTADVLMKDNSAEKEFITFTKAARLLGYTSSQIINRLIDEKHLKAYSFPDSSTRKVCRHEVLSLIQLSVSKDSEDQE
Ga0315331_107639043	3300031774	Seawater	MKDNFEEKNFITFTKAARLLGYTSSQIINRLIDEKYLHAYSFPDCSTRKVCRNEVLSLIKLSVSKDSNEKE
Ga0315315_104432414	3300032073	Seawater	MKDNFEEKNFITFTKAARLLGYTSSQIINRLIDEKHLHAYSFPDCSTRKVCRNEVLSLIKLSVSKDSNEKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078233

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences