Metagenome / Metatranscriptome Family F078225

Basic Information
Family ID	F078225
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	59 residues
Representative Sequence	MSLDRVFMLIAAAALMSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPEGLDSPNTQG
Number of Associated Samples	106
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.26 %
% of genes near scaffold ends (potentially truncated)	94.83 %
% of genes from short scaffolds (< 2000 bps)	92.24 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Unclassified (69.828 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.276 % of family members)
Environment Ontology (ENVO)	Unclassified (31.034 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.034 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.29% β-sheet: 0.00% Coil/Unstructured: 64.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00701	DHDPS	87.07
PF00578	AhpC-TSA	6.03
PF13740	ACT_6	3.45

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	174.14

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
All Organisms	root	All Organisms	30.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
cellular organisms	root	All Organisms → cellular organisms	30.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.31 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.59 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	4.31 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	4.31 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	4.31 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.72 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.86 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	4.31 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.72 %
Bradyrhizobium sp. STM 3809	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3809	0.86 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.83 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	4.31 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.72 %
Bradyrhizobium sp. STM 3809	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3809	0.86 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02G5SYL	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3809	505	Open in IMG/M
3300002245\|JGIcombinedJ26739_101304124	Not Available	617	Open in IMG/M
3300004080\|Ga0062385_10595963	Not Available	698	Open in IMG/M
3300004082\|Ga0062384_100241647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1090	Open in IMG/M
3300004082\|Ga0062384_100664547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	713	Open in IMG/M
3300004091\|Ga0062387_100996603	Not Available	642	Open in IMG/M
3300004091\|Ga0062387_101593612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	527	Open in IMG/M
3300004631\|Ga0058899_11469964	Not Available	590	Open in IMG/M
3300005163\|Ga0066823_10108823	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300005437\|Ga0070710_10526448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	813	Open in IMG/M
3300005541\|Ga0070733_11066995	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300005602\|Ga0070762_10182997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1273	Open in IMG/M
3300005610\|Ga0070763_10980516	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300005921\|Ga0070766_10473644	Not Available	829	Open in IMG/M
3300005993\|Ga0080027_10175103	Not Available	831	Open in IMG/M
3300007788\|Ga0099795_10485050	Not Available	574	Open in IMG/M
3300009038\|Ga0099829_11209889	Not Available	625	Open in IMG/M
3300009093\|Ga0105240_11036752	Not Available	876	Open in IMG/M
3300009500\|Ga0116229_10002108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	31968	Open in IMG/M
3300009709\|Ga0116227_10973729	Not Available	639	Open in IMG/M
3300009839\|Ga0116223_10356715	Not Available	865	Open in IMG/M
3300010379\|Ga0136449_101116598	All Organisms → cellular organisms → Bacteria → Proteobacteria	1253	Open in IMG/M
3300010379\|Ga0136449_101257500	Not Available	1159	Open in IMG/M
3300011270\|Ga0137391_10718209	Not Available	829	Open in IMG/M
3300012189\|Ga0137388_10435783	Not Available	1215	Open in IMG/M
3300012203\|Ga0137399_11107003	Not Available	667	Open in IMG/M
3300012209\|Ga0137379_11142540	Not Available	685	Open in IMG/M
3300012363\|Ga0137390_10887156	Not Available	847	Open in IMG/M
3300012918\|Ga0137396_10700625	Not Available	747	Open in IMG/M
3300012924\|Ga0137413_10032974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2862	Open in IMG/M
3300012927\|Ga0137416_10405743	All Organisms → cellular organisms → Bacteria → Proteobacteria	1156	Open in IMG/M
3300012929\|Ga0137404_10705115	Not Available	913	Open in IMG/M
3300013832\|Ga0120132_1103943	Not Available	598	Open in IMG/M
3300014165\|Ga0181523_10323628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	867	Open in IMG/M
3300014501\|Ga0182024_10936374	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300015160\|Ga0167642_1043849	Not Available	697	Open in IMG/M
3300015199\|Ga0167647_1070315	Not Available	929	Open in IMG/M
3300015242\|Ga0137412_10124287	Not Available	2089	Open in IMG/M
3300016750\|Ga0181505_10845530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	2457	Open in IMG/M
3300019284\|Ga0187797_1383036	Not Available	671	Open in IMG/M
3300020034\|Ga0193753_10053885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2142	Open in IMG/M
3300020062\|Ga0193724_1113605	Not Available	540	Open in IMG/M
3300020199\|Ga0179592_10278740	Not Available	746	Open in IMG/M
3300020579\|Ga0210407_10876414	Not Available	689	Open in IMG/M
3300021088\|Ga0210404_10444383	Not Available	729	Open in IMG/M
3300021168\|Ga0210406_10907277	Not Available	662	Open in IMG/M
3300021171\|Ga0210405_10677985	Not Available	798	Open in IMG/M
3300021363\|Ga0193699_10484617	Not Available	506	Open in IMG/M
3300021401\|Ga0210393_10004286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11306	Open in IMG/M
3300021403\|Ga0210397_11376500	Not Available	548	Open in IMG/M
3300021405\|Ga0210387_10186334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1794	Open in IMG/M
3300021405\|Ga0210387_10703276	Not Available	896	Open in IMG/M
3300021406\|Ga0210386_11639376	Not Available	533	Open in IMG/M
3300021406\|Ga0210386_11769861	Not Available	509	Open in IMG/M
3300021420\|Ga0210394_10016745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	6919	Open in IMG/M
3300021432\|Ga0210384_10851671	Not Available	811	Open in IMG/M
3300021474\|Ga0210390_10920748	Not Available	718	Open in IMG/M
3300021475\|Ga0210392_10227575	Not Available	1313	Open in IMG/M
3300021479\|Ga0210410_10691617	Not Available	901	Open in IMG/M
3300022530\|Ga0242658_1030897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300022530\|Ga0242658_1106184	Not Available	679	Open in IMG/M
3300022557\|Ga0212123_10919456	Not Available	513	Open in IMG/M
3300022714\|Ga0242671_1076514	Not Available	601	Open in IMG/M
3300022721\|Ga0242666_1089440	Not Available	700	Open in IMG/M
3300022726\|Ga0242654_10204560	Not Available	688	Open in IMG/M
3300022730\|Ga0224570_106403	Not Available	719	Open in IMG/M
3300024288\|Ga0179589_10094536	All Organisms → cellular organisms → Bacteria → Proteobacteria	1211	Open in IMG/M
3300027037\|Ga0209005_1015845	Not Available	883	Open in IMG/M
3300027381\|Ga0208983_1069633	Not Available	667	Open in IMG/M
3300027591\|Ga0209733_1010997	All Organisms → cellular organisms → Bacteria	2387	Open in IMG/M
3300027635\|Ga0209625_1050732	Not Available	926	Open in IMG/M
3300027674\|Ga0209118_1175232	Not Available	586	Open in IMG/M
3300027678\|Ga0209011_1198278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	548	Open in IMG/M
3300027684\|Ga0209626_1177688	Not Available	564	Open in IMG/M
3300027795\|Ga0209139_10314450	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300027817\|Ga0209112_10141742	Not Available	802	Open in IMG/M
3300027846\|Ga0209180_10474873	Not Available	702	Open in IMG/M
3300027853\|Ga0209274_10606317	Not Available	566	Open in IMG/M
3300027867\|Ga0209167_10057400	Not Available	1924	Open in IMG/M
3300027879\|Ga0209169_10147753	All Organisms → cellular organisms → Bacteria → Proteobacteria	1223	Open in IMG/M
3300027879\|Ga0209169_10317416	Not Available	819	Open in IMG/M
3300027908\|Ga0209006_10966922	Not Available	679	Open in IMG/M
3300028047\|Ga0209526_10557515	Not Available	739	Open in IMG/M
3300028065\|Ga0247685_1023686	Not Available	731	Open in IMG/M
3300028536\|Ga0137415_11379573	Not Available	525	Open in IMG/M
3300028806\|Ga0302221_10272542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	738	Open in IMG/M
3300028806\|Ga0302221_10294989	Not Available	707	Open in IMG/M
3300029915\|Ga0311358_10836249	Not Available	655	Open in IMG/M
3300029922\|Ga0311363_11419864	Not Available	564	Open in IMG/M
3300030057\|Ga0302176_10472002	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300030549\|Ga0210257_10080249	Not Available	735	Open in IMG/M
3300030617\|Ga0311356_10237299	All Organisms → cellular organisms → Bacteria → Proteobacteria	1849	Open in IMG/M
3300030739\|Ga0302311_10778568	Not Available	624	Open in IMG/M
3300030740\|Ga0265460_11461975	Not Available	678	Open in IMG/M
3300030741\|Ga0265459_10490265	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300030815\|Ga0265746_1027817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	717	Open in IMG/M
3300030855\|Ga0075374_11420614	Not Available	511	Open in IMG/M
3300030970\|Ga0075381_11273624	Not Available	578	Open in IMG/M
3300031018\|Ga0265773_1017680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	677	Open in IMG/M
3300031023\|Ga0073998_11481098	Not Available	671	Open in IMG/M
3300031231\|Ga0170824_116180086	Not Available	737	Open in IMG/M
3300031232\|Ga0302323_100899005	Not Available	979	Open in IMG/M
3300031236\|Ga0302324_103128044	Not Available	547	Open in IMG/M
3300031469\|Ga0170819_16467230	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300031708\|Ga0310686_114015486	Not Available	615	Open in IMG/M
3300031708\|Ga0310686_115448002	Not Available	849	Open in IMG/M
3300031718\|Ga0307474_10822241	Not Available	735	Open in IMG/M
3300031823\|Ga0307478_10806316	Not Available	786	Open in IMG/M
3300032174\|Ga0307470_10476744	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300032515\|Ga0348332_10422343	Not Available	558	Open in IMG/M
3300032515\|Ga0348332_10509525	Not Available	620	Open in IMG/M
3300032756\|Ga0315742_11502648	Not Available	719	Open in IMG/M
3300032783\|Ga0335079_11600648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	640	Open in IMG/M
3300034130\|Ga0370494_078493	Not Available	833	Open in IMG/M
3300034163\|Ga0370515_0343602	Not Available	630	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.55%
Host-Associated	Host-Associated	3.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.79%
Aquatic	Environmental → Aquatic	7.76%
Plants	Host-Associated → Plants	3.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.31%
Peat	Environmental → Terrestrial → Peat	7.76%
Freshwater	Environmental → Aquatic → Freshwater	6.90%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.72%
Peat Moss	Host-Associated → Plants → Peat Moss	1.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.76%
Loam	Environmental → Terrestrial → Soil → Loam	16.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.17%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.45%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.72%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.72%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.86%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.86%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.86%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.86%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300027037	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030549	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030970	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_00262400	2170459010	Grass Soil	MSLDRVLILVAAAALMSGCHMFGKSDCHSKQEYQRAAQVPPLKVPSGLDTPNTQGALVIPTVDLAPPPPGPK
JGIcombinedJ26739_1013041242	3300002245	Forest Soil	MSLDRVLMLIAAAALTSGCHLFSKITPDCHTPQEYQRAGQVAPLKVP
Ga0062385_105959631	3300004080	Bog Forest Soil	MSLDRILLVIAAAALTSGCHWHLFSKLNVDCHAPQEYQRARQLPPLIVPSGLDSPNT
Ga0062384_1002416472	3300004082	Bog Forest Soil	MSLDRALLLIAAGTLLSGCHLFSKLNPDCHTKQEYQHALSAAPLKVPPGLDSPNTTGSLVIPQVTDVPPPP
Ga0062384_1006645471	3300004082	Bog Forest Soil	MSFERILTVIAVSTLMSGCHLFGKLNPDCHSAQEYQHALSAPPLKVPAGLDSPNTAGALAIPAV
Ga0062387_1009966032	3300004091	Bog Forest Soil	MSLDRVLMVVAAAALMSGCHLFSKLTPDCHTPQEYQRAGQVPPLKVPE
Ga0062387_1015936121	3300004091	Bog Forest Soil	MSFERILLLVAAAALMSGCHIFSKLNPDCHSPQEYQHALSAPPLKVPAGLDQPNTAGALVIPTVTDVPPPP
Ga0058899_114699641	3300004631	Forest Soil	MSFDRVLMLIAAGALMSGCHLFSKLTPDCHKRQEYQNALSAPPLKVPP
Ga0066823_101088232	3300005163	Soil	MSLDRVLMLVAAAALISGCHMFSSKSDCHSQHEYQRAAQMPPLQVPSGLDTPNTQGALVIPTVDL
Ga0070710_105264482	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDRVLMLIAAAALMSGCHMFGKSDCHSQQEYQRAAQAPPLKVPSGLDTPNTQGALVIPTVDL
Ga0070733_110669952	3300005541	Surface Soil	MSLDRVLMLIAAAALASGCHLFSKITPDCHTAQEYQRAGQVAPLKVPAGLDTPNTQGAMV
Ga0070762_101829973	3300005602	Soil	MSLDRVLMLIAAAALTSGCHLFSKITPDCHTPQEYQRAGQVAPLKVPAGLDTPNTQGAMVIPAATLAPPPPGPKD
Ga0070763_109805161	3300005610	Soil	MSLDRVLILIAAATLASGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPPGLDSPNTKDALVIPTVELAP
Ga0070766_104736442	3300005921	Soil	MNLDRVLLVGIASACMSGCHLFSKLNPDCHTAQEYQHALSAPPLKVPPGLD
Ga0080027_101751031	3300005993	Prmafrost Soil	MSLDRALMLIAAATLASGCGLFHKMAGDCHSPQEYQRAGQVPPLKVPAGLDSPNTQG
Ga0099795_104850502	3300007788	Vadose Zone Soil	MSLDRVLLVVAAAALMSGCHLFGKLTPDCHTPQEYQRAGQVAQLKVPTGLDSPNTQGARCR*
Ga0099829_112098892	3300009038	Vadose Zone Soil	MSLDRVLMVVAAAALMSGCHLFRGADCHTRQEYQRAGQVPPLKV
Ga0105240_110367521	3300009093	Corn Rhizosphere	MSLDRALTLIAAATLLSGCHLFSKLTPDCHSPQEYRRAAQVPPLKVP
Ga0116229_100021081	3300009500	Host-Associated	MRLDRVFAVIAAAALSSGCHLFSKLTPDCHTQQEYQRAGQVPPLKVPAGLDSPN
Ga0116227_109737291	3300009709	Host-Associated	MNVDRVLLMIALVAPMSGCSLFNRLNPDCHSPQDYQHAVSVGPLKVPPGMDAPNTQGALVIPTVELAPPPPGPKD
Ga0116223_103567151	3300009839	Peatlands Soil	MTLIIATAMIASGCHMFGKAVPDCHRSQEYQSAVQVPPLKVPAGLDTPNTQGALVIPTLD
Ga0136449_1011165982	3300010379	Peatlands Soil	MIAAATLMSGCHMFSRVSDCHRPQEYQRAAQVALLKVPPGLDTPNTQGALAIPTLELAPPPPG
Ga0136449_1012575001	3300010379	Peatlands Soil	MAAATLTSGCHLFSKLNVDCHSPQDYVRARQMPALTVPPGLDSPNTQSALVIPTVELAPPPPGPKDT
Ga0137391_107182092	3300011270	Vadose Zone Soil	MSLDRVLMVVAAAALMSGCHLFGKLTPNCHTRQEYQRAGQVAPLKVPAGLDSPNTQGALVIPTVELAPP
Ga0137388_104357832	3300012189	Vadose Zone Soil	MSLDRVLMVVTAAALMSGCHVFRGADCHTRQEYQRAGQVPPLKVPAGLDSPNTQGALVIP
Ga0137399_111070032	3300012203	Vadose Zone Soil	MSLDRVLLVVAAAALMSGCHLFGKLTPDCHTPQEYQRAGQVAPLKVPTGLDSPNTQGALVIPVV
Ga0137379_111425402	3300012209	Vadose Zone Soil	MSLDRVLLVVGAAALMSGCHLFGKLKSDCHTTQEYQRAGQVPPLKVPAGL
Ga0137390_108871561	3300012363	Vadose Zone Soil	MSLDRVLSIVAAAALMSGCHVFGTADCHTRQEYQRAGQVPPLKVPAGLDTPNTRGALVI
Ga0137396_107006251	3300012918	Vadose Zone Soil	MSLDRVLMVVAAAALTSGCHLFGKLTPDCHTRQKYQRAAQVPPLKVPPGLD
Ga0137413_100329741	3300012924	Vadose Zone Soil	MSLDRVLLVVSAAALMSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPAGLDTPNTQGALVIPVVAL
Ga0137416_104057431	3300012927	Vadose Zone Soil	MSLDRVLLVVAAAALMSGCHLFGKLTPDCHTRQEYQRAGQVPALKVPPGLDTPNTQGA
Ga0137404_107051152	3300012929	Vadose Zone Soil	MSLDRVLMVVAAAALTSGCHLFGKLTPDCHTRQEYQRAAQVPPLKVPPGLDSPNTQGALVIPTVELAPPPPGPKDSCL
Ga0120132_11039432	3300013832	Permafrost	MSLDRVLMLIAAAALASGCHLFSKITPDCHTSQEYQRAGQVAPLKVPDGLDTPNTQGALVIPAVTLAPPPPGPKD
Ga0181523_103236281	3300014165	Bog	MRVEQAVSMIAAATLLSACHMFSRIGDCHRPQEYQRAVQVAPLKVPAGLDTPNTQGALVIPTVDLAPPPPGAHDAC
Ga0182024_109363742	3300014501	Permafrost	MLMAAGTLMSGCHLLTKLTPDCHKRQEYQNALSAPPLKVPPGLDS
Ga0167642_10438491	3300015160	Glacier Forefield Soil	MSFERVLMLVAASALMSGCHLFSKLTPDCHTRQDYQNALSAPPLKVPPGLDSPN
Ga0167647_10703151	3300015199	Glacier Forefield Soil	MSLDRVLMVMIAAALLSGCHLFGKLTPDCHTPQEYQRAGQVAPLKVPAGLD
Ga0137412_101242871	3300015242	Vadose Zone Soil	MSLDRILVLTAAGVLMSGCHLFSKLNPDCHSAQEYQHALSAPPLKVPA
Ga0181505_108455305	3300016750	Peatland	MSFDRMTLIIAAAMIASGCHMFSKAIPDCHRPQEYQRAVQVPPLKVPTGLDTPNTQGALVIPTLEVTPP
Ga0187797_13830361	3300019284	Peatland	MSLERAIFVIAAATVMSGCHTFSHWANRVTDCHRPQEYQRAVQVAPLKVPPGLDTPNTQGALVIPTVELAPPPP
Ga0193753_100538851	3300020034	Soil	MSLERVLMLIAASALVSGCHLFTKLTPDCHSKQEYQHALSAQPLQVPPGLDSPNTAGALVIPPVTD
Ga0193724_11136052	3300020062	Soil	MSLDRVLTLIAASALMSGCHLFSKLNPDCHSKQEYQHALSAQPLKMPPGLDSP
Ga0179592_102787401	3300020199	Vadose Zone Soil	MSLDRVLLVVAAAALMSGCHLFGKLTPDCHTPQEYQRAGQVAQLKVP
Ga0210407_108764141	3300020579	Soil	MNFDRVLLLMIASTALCGCHIFSKLNPDCHTNQEYQHALSAPPLKVPPG
Ga0210404_104443832	3300021088	Soil	MSLDRMLVLIAASALMSGCHLFSKLNPDCHSKQDYQHALSAPPLKVPPGLDSPNTAGA
Ga0210406_109072771	3300021168	Soil	MSLDRILVLIAASALMGGCHLFSKLNPDCHSKQEYQHALSAPPLKVPAGLD
Ga0210405_106779851	3300021171	Soil	MSFDRVLMLIAAGALMSGCHLFSKLTPDCHKRQEYQNALSAPPLKVPPGL
Ga0193699_104846172	3300021363	Soil	MSLDRVLTLIAASALMSGCHLFSKLNPDCHSKQEYQHALSAQPLKVPPGLETPNTAG
Ga0210393_100042861	3300021401	Soil	MSLDRILLLVAASSLMSGCFIFKKLTPDCHTPQEYQHALSAPPLKVPAGLDTPNTAGALVIPTVT
Ga0210397_113765001	3300021403	Soil	MRFDRVLLLVAASALMSGCHLFSKLVPDCHAAQEYQHALSAPPLKVPAGLDSPNTAGALAIPT
Ga0210387_101863341	3300021405	Soil	MSLDRVLMLIAAAALTSGCHLFSKITPDCHTPQEYQRAGQVAPLKVPAGLDTPNTQGAMVIPAATLAPPPPGPKDTCL
Ga0210387_107032762	3300021405	Soil	MSLDRVFMLIAAAALMSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPEGLDSPNTQG
Ga0210386_116393762	3300021406	Soil	MSLDRILLLVAASSLMSGCFIFKKLTPDCHTPQEYQHALSAPPLKVPAGLDT
Ga0210386_117698611	3300021406	Soil	MSFDRILLVIAAATLTSGCHWHLFSKLTPDCHAPQEYQRAKQLPPLVVPPG
Ga0210394_100167459	3300021420	Soil	MSLDRVLLVIAAAALTSGCHMFSKLSADCHSPQEYQRARQMQPLTVPPGLDSPNTQGALV
Ga0210384_108516712	3300021432	Soil	MIAAVTLLSACHWFNRVADCHRPQEYQRAVQAPPLKVPSGLDTPNTQGALVIPTVELAPPPPGRHD
Ga0210390_109207481	3300021474	Soil	MSLERVLMLMAAGTLMSGCHFLTKLTPDCHKRQDYQNALSAPPLKVPPGLDSPNTAGALAIPTV
Ga0210392_102275753	3300021475	Soil	MSLDRVLMLIAAAALTSGCHLFSKITPDCHTPQEYQRAGQVAPLKVPAGLDTPNTQGAMVIPAATLAPPPPGP
Ga0210410_106916172	3300021479	Soil	MSLDRVLMVVAAAALMSGCHLFGKLTPDCHTRQEYQRAGQAPPLKVPP
Ga0242658_10308971	3300022530	Soil	MSFERVLMLVAAGALMSGCHLFTKLNPDCHTRQDYQNALSAPPLKVP
Ga0242658_11061842	3300022530	Soil	MSLERIFLVVTAGALMSGCHMFSKLNPDCHTAQEYQHALSAPPLKVPAGLDSPNTAGALVIPTVTNAPPAPG
Ga0212123_109194562	3300022557	Iron-Sulfur Acid Spring	MSLDRVLLVVAAAAMMSGCHLFGKITPDCHTRQEYQRAGQVAPLKVPPGLDKPNTQSALVIPTVELEPPPPGPK
Ga0242671_10765141	3300022714	Soil	MSLDRILLLVAASSLMSGCFIFKKLTPDCHTPQEYQHALSAPPLKVPAGLDTPNTAGA
Ga0242666_10894401	3300022721	Soil	MSLDRILVVVAAAALMSGCHLFSKLTPDCHTPQEYQRAGQVAPLIVPQGLDSPNTQGALVIPAVALAPPPPGPKDA
Ga0242654_102045601	3300022726	Soil	MVVFIGAAALLSGCHHIMTRLNPDCHVRQEYQQAAQVAPLKVPEGLDTPNTKDALVIPTVELAPPPPGPK
Ga0224570_1064031	3300022730	Rhizosphere	MSFDRILLVIAAAALTSGCHWHLFSKLTPDCHAPQEYQRAKQLPPLIVPPGLDSPN
Ga0179589_100945361	3300024288	Vadose Zone Soil	MSLDRILLVVAAAALMSGCHLFGRLTPDCHTPQEYQRAGQVAPLKVPSGLDSPN
Ga0209005_10158452	3300027037	Forest Soil	MSFERILAVIAASALLSGCHFFSKLNPDCHTAQDYQHALSAPPLKVPAGLDSP
Ga0208983_10696332	3300027381	Forest Soil	MSLDRILVLIAASALLSGCHLFGKLNPDCHSKQEYQHALSAQPLKVPAGLDSPNTAG
Ga0209733_10109974	3300027591	Forest Soil	MSLDRVLILIAAAALASGCHLFSKITPDCHTAQEYQRAGQVPPLKVPSG
Ga0209625_10507322	3300027635	Forest Soil	MSLDRIFMLIAAAALMSGCHLFSKLTPDCHVPQEYQRAGQVAPLKVPEGLDSPNTQGA
Ga0209118_11752321	3300027674	Forest Soil	MSLDRVLILIAAAALASGCHLFSKITPDCHTAQEYQRAGQAAPLKVPEGLDSPNTQGAMVIPAVTLVPP
Ga0209011_11982781	3300027678	Forest Soil	MSLDRVLLVAAAAALMSGCHLFSTPDCHTPQEYQRAGQVPPLKVPSGLDKPNTQGALVI
Ga0209626_11776881	3300027684	Forest Soil	MSLDRVLMLIAAAALASGCHLFSKITPDCHTPQEYQRAGQVAPLKVPDGLDTPNTQGAM
Ga0209139_103144502	3300027795	Bog Forest Soil	MSFDRVVMLIAAAALTSGCHLFSKLTPDCHSRQEYQRAGEIAPLKVPAGLDTPNTQGALVIPNVALSPPD
Ga0209112_101417422	3300027817	Forest Soil	MSFERILAVIAASALLSGCHFFSKLNPDCHTAQDYQHALSAPPLKVPAGLDSPNTQGALVIPAVADALPA
Ga0209180_104748732	3300027846	Vadose Zone Soil	MSLDRVLMVVAAAALMSGCHLFRGADCHTRQEYQRAGQVPPLKVPAGLDSPNTQ
Ga0209274_106063171	3300027853	Soil	MSLDRALILIAAATLTSGCHLFSKLTPDCHSPQEYQRAGQVQPLKVPA
Ga0209167_100574001	3300027867	Surface Soil	MSFDRILLVIAAATLTSGCHWHLFSKLTPDCHAPQEYQRAKQLPPLVVPPGL
Ga0209169_101477531	3300027879	Soil	MSLDRILLLVATGALLSGCHLFGKLTPDCHTPQEYQHALSAPPLKVPS
Ga0209169_103174162	3300027879	Soil	MSFDRVLLLVAASALMSGCHLFSKLNPDCHSAQEYQHALSIPPLKVPAGLDSPNTAGALVIPAV
Ga0209006_109669222	3300027908	Forest Soil	MSLDRVLIFIASAALMSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPPGLDSPNTKDAL
Ga0209526_105575152	3300028047	Forest Soil	MSLARILMLAAAGTLVSGCHLFSKLNPDCHTRQEYQRAASAPPLKVPAGLDAPNTAGAL
Ga0247685_10236862	3300028065	Soil	MSLDRVWMLVFAAALMSGCHMFGKSDCHSQQEYQRAAQAPPLKVPSGLDT
Ga0137415_113795732	3300028536	Vadose Zone Soil	MSLDRVLLVVAAAALVSGCHLFGRLTPDCHTPQEYQRAGQVPPLKVPAGLDSPNTQ
Ga0302221_102725421	3300028806	Palsa	MSLDRILLLLAAGALLSGCHLFSKLTPDCHSAQEYQHALSAPPLKVPPGL
Ga0302221_102949891	3300028806	Palsa	MSFDRALGMIAAATLVSGCHIFNRLTPDCHRPQEYQRATQLAPLKVPPGLDTPNTQG
Ga0311358_108362491	3300029915	Bog	MSLDRALMLVAAAALLSGCHLFSKLTPDCHTTQEYQRAGQIAPLKVPTGL
Ga0311363_114198642	3300029922	Fen	MSLERFVILIAAAVILSGCHVFSKLNPDCHAPQEYRHAGQIPPLKVPAGLDSPNTQGAL
Ga0302176_104720022	3300030057	Palsa	MSLDRVFMLIAAAALMSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPEGLDSPNTQGTLVIPAVA
Ga0210257_100802491	3300030549	Soil	MSLDRIVLLVAAGALLNGCFVFKKLTPDCHSPQEYQHALSAPPLKVPSGL
Ga0311356_102372994	3300030617	Palsa	MSLDRVFMLIAAAALMSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPEGLD
Ga0302311_107785682	3300030739	Palsa	MSLDRVVFVFAASALMSGCHLFSKLTPDCHTPQEYQRAGQVPPLKV
Ga0265460_114619752	3300030740	Soil	MNFDRILLLVAASALLGGCHIFSKLNPDCHSPQEYQHALSAPPLKVPAGLDSPNTAGALVIPTVAG
Ga0265459_104902651	3300030741	Soil	MSLDRVLILIAAAALSSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPVGLDSPNTKDALV
Ga0265746_10278172	3300030815	Soil	MSLDRILLLVAASALMSGCHLFGKLTPDCHTAQEYQHALSAPPLKVPSGLDT
Ga0075374_114206141	3300030855	Soil	MSLDRILVLIAASALMSGCHLFSKLNPDCHSKQEYQHALSAPPLKVPPGLDSPNTAGALVIPQV
Ga0075381_112736242	3300030970	Soil	MSLDRILVLIAASALMSGCHLFSKLNPDCHSKQEYQHALSAPPLKVPPGLDSPNTAGALV
Ga0265773_10176802	3300031018	Soil	MSLDRILLLVAAGALMSGCHLFTKLNPDCHSPQEYQHALSAPPLKVPSGLDTPNTAGALVIPTVTDAPPP
Ga0073998_114810982	3300031023	Soil	MSLDRVLMLIAASALMSGCHLFGKLTPDCHSKQEYQHALSAQPLKVPPGLDSPNTAGALIIPATTVRGATRRP
Ga0170834_1034051912	3300031057	Forest Soil	MSLDRIVVLMAAGVLMSGCHLFSKLNPDCHTAQEYQHALSAPPLKV
Ga0170824_1161800862	3300031231	Forest Soil	MSFERIVVFIGAAALLSGCHIFSRLNPDCHTRQEYQRAAQVAPLKVPDGLDTPNTQGALVIPTVELS
Ga0302323_1008990052	3300031232	Fen	MSLDRVLMVVAATALTSGCHLFSKLTPDCHSRQEYQRAGQVAPLKVPAGLD
Ga0302324_1031280442	3300031236	Palsa	MSFDRALGMIAAATLVSGCHIFSRLSPDCHRPQEYQRATQLPPLKVPPGLDTPNTQGALVIPTV
Ga0170819_164672301	3300031469	Forest Soil	MSLDRVLVLVAAAALMSGCHMFSTKSDCHSQQEYQRAAQMPPLKVPSGLDTPNTQGAL
Ga0310686_1140154862	3300031708	Soil	MSLDRVLMLIAASALMSGCHLFSKLTPDCHSKQEYQHALSAQPLKV
Ga0310686_1154480022	3300031708	Soil	MSLDRVLMLIAASALMSGCHLFSKLTPDCHSKQEYQHALSAQPLKVPPGLDSPNTA
Ga0307474_108222411	3300031718	Hardwood Forest Soil	MSLDRVLMVVAAAALMSGCHMFGKLSGDCHTRQEYQRAGQVPPLKVPPGLDSPN
Ga0307478_108063161	3300031823	Hardwood Forest Soil	MSFDRILLVIAAATLTSGCHWHLFSKLTPDCHAPQEYQRAKQLPPLVVPPGLDSPNTQSALVIPTVDLAP
Ga0307470_104767441	3300032174	Hardwood Forest Soil	MSLDRVLLVVAAAALMSGCHLFGKLTPDCHTPQEYQRAGQVAPLKVP
Ga0348332_104223432	3300032515	Plant Litter	MSLDRILLLVAASALMSGCHLFGKLTPDCHTAQEYQHALSAPPLKVPSGLDTPNTAGALVIPTVTDAPPPPGPRKALLITIDIIK
Ga0348332_105095251	3300032515	Plant Litter	MSLDRVLMLIAAAALTSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPE
Ga0315742_115026482	3300032756	Forest Soil	MSFERILMLIAASALMSGCHLFSKLTPDCHSKQEYQHALSAQPLKVPPGLDSPNTAGALVIPPVTDVPPPDTKKEKSE
Ga0335079_116006482	3300032783	Soil	MSLDRAIVILAGATLLSACHMFNRVADCHRPQEYQRAVQMPPLKVPQGLDTPNTQGALVIPTVELAAP
Ga0370494_078493_1_219	3300034130	Untreated Peat Soil	MKVGRILVSIGAATLLGGFHIASRLNPDCHVRQEYQQARQVAPLKVPDGLDSPNTQSSLVIPTVEASPPPPGP
Ga0370515_0343602_1_144	3300034163	Untreated Peat Soil	MSFDRVLTLIAAAALMSGCHLFSKLTPDCHTPQEYQRAGQVAPLKVPP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078225

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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