Metagenome / Metatranscriptome Family F078163

Basic Information
Family ID	F078163
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	64 residues
Representative Sequence	TLNSTSNTSSVIDSQNFKTRETLGISSQSQFAAAMDNLTNTAVIVDQNNNRVLFLAMPK
Number of Associated Samples	103
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.72 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (98.276 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.310 % of family members)
Environment Ontology (ENVO)	Unclassified (29.310 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.276 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110. 1Ga0066388_1005574773 2Ga0066388_1013535312 3Ga0066388_1060239783 4Ga0066903_1048437973 5Ga0066788_100477032 6Ga0066790_105263652 7Ga0075028_1002743841 8Ga0075019_108449102 9Ga0099829_106187231 10Ga0099828_108784592 11Ga0116217_101817571 12Ga0126373_109629201 13Ga0126370_107509622 14Ga0126379_104850661 15Ga0126381_1026596022 16Ga0136449_1000002041 17Ga0150983_107298322 18Ga0137392_109781892 19Ga0137389_114437222 20Ga0137360_101525653 21Ga0137395_101411361 22Ga0137394_100364361 23Ga0137359_105263412 24Ga0137404_101897503 25Ga0137407_102199961 26Ga0126369_101418294 27Ga0181539_13693642 28Ga0137414_12170821 29Ga0137414_12615861 30Ga0182036_105406822 31Ga0182041_109451931 32Ga0182035_119410231 33Ga0182034_101407551 34Ga0182034_105179422 35Ga0182037_112484962 36Ga0182039_103706171 37Ga0181505_111144861 38Ga0187818_100795771 39Ga0187818_104578083 40Ga0187786_100479331 41Ga0187817_102691331 42Ga0187804_102351171 43Ga0187788_102374072 44Ga0187858_103539112 45Ga0187772_111614522 46Ga0187769_103298491 47Ga0187771_110889691 48Ga0187770_101281533 49Ga0187770_102285741 50Ga0187798_10327861 51Ga0210399_107446081 52Ga0210406_110884042 53Ga0210396_112641602 54Ga0210393_107151122 55Ga0210387_102778651 56Ga0210383_101124043 57Ga0210394_110240692 58Ga0210410_101244513 59Ga0242662_100023272 60Ga0242662_100410082 61Ga0247688_10104401 62Ga0247691_10116453 63Ga0247679_10609381 64Ga0208688_10298761 65Ga0209849_10254131 66Ga0179593_12390875 67Ga0179593_12393252 68Ga0179587_106537831 69Ga0207742_1145241 70Ga0207820_1142861 71Ga0207805_10228582 72Ga0207852_10014031 73Ga0207806_10226591 74Ga0207826_11205091 75Ga0209039_101157922 76Ga0209701_101924351 77Ga0209067_104982921 78Ga0209698_104236082 79Ga0247684_10790902 80Ga0170818_1037627381 81Ga0310915_110431851 82Ga0318574_108406431 83Ga0307474_107598751 84Ga0306918_100865754 85Ga0318537_103818451 86Ga0318546_112317581 87Ga0318529_103200522 88Ga0318576_103055721 89Ga0318576_105619822 90Ga0318550_101902732 91Ga0307478_101143141 92Ga0310917_111847352 93Ga0306919_103865201 94Ga0318544_103475351 95Ga0318522_102123162 96Ga0318551_108529501 97Ga0318520_105449831 98Ga0318520_110951501 99Ga0306923_108796472 100Ga0310913_104567612 101Ga0310909_101868053 102Ga0306926_112772022 103Ga0307479_101190581 104Ga0307479_101593614 105Ga0318558_101335021 106Ga0318518_100766972 107Ga0307472_1021573591 108Ga0306920_1007434513 109Ga0335082_104518872 110Ga0335081_115254331 111Ga0335081_127480692 112Ga0335069_101178641 113Ga0318519_103676492 114Ga0318519_105962812 115Ga0314864_0173071_3_188 116Ga0314861_0287140_582_746
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110. 1Ga0066388_1005574773 2Ga0066388_1013535312 3Ga0066388_1060239783 4Ga0066788_100477032 5Ga0075028_1002743841 6Ga0099829_106187231 7Ga0099828_108784592 8Ga0116217_101817571 9Ga0126370_107509622 10Ga0126369_101418294 11Ga0137414_12170821 12Ga0182034_105179422 13Ga0182037_112484962 14Ga0187818_100795771 15Ga0187818_104578083 16Ga0187817_102691331 17Ga0187804_102351171 18Ga0187788_102374072 19Ga0187772_111614522 20Ga0187771_110889691 21Ga0187770_102285741 22Ga0187798_10327861 23Ga0210393_107151122 24Ga0210383_101124043 25Ga0247679_10609381 26Ga0209039_101157922 27Ga0170818_1037627381 28Ga0307474_107598751 29Ga0307478_101143141 30Ga0306919_103865201 31Ga0335081_127480692 32Ga0314864_0173071_3_188
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1Ga0099828_108784592 2Ga0066388_1005574773 3Ga0066388_1013535312 4Ga0075028_1002743841 5Ga0126373_109629201 6Ga0136449_1000002041 7Ga0137392_109781892 8Ga0126369_101418294 9Ga0137414_12615861 10Ga0187818_100795771 11Ga0187817_102691331 12Ga0187804_102351171 13Ga0187788_102374072 14Ga0187772_111614522 15Ga0187769_103298491 16Ga0187770_101281533 17Ga0187770_102285741 18Ga0187798_10327861 19Ga0210393_107151122 20Ga0242662_100023272 21Ga0247688_10104401 22Ga0247691_10116453 23Ga0209849_10254131 24Ga0207742_1145241 25Ga0207806_10226591 26Ga0307478_101143141 27Ga0306919_103865201 28Ga0306923_108796472 29Ga0307479_101593614 30Ga0335082_104518872 31Ga0335081_115254331 32Ga0335081_127480692 33Ga0335069_101178641
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.64% β-sheet: 20.69% Coil/Unstructured: 66.67%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03938	OmpH	59.48
PF02576	RimP_N	2.59
PF13720	Acetyltransf_11	0.86
PF14520	HHH_5	0.86
PF13181	TPR_8	0.86
PF08529	NusA_N	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2825	Periplasmic chaperone for outer membrane proteins, Skp family	Cell wall/membrane/envelope biogenesis [M]	59.48
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	2.59

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	1.72 %
Unclassified	root	N/A	98.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.72 %
Unclassified	root	N/A	98.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.72 %
Unclassified	root	N/A	98.28 %

Scaffold	Taxonomy	Length	IMG/M Link
3300010379\|Ga0136449_100000204	All Organisms → cellular organisms → Bacteria	148092	Open in IMG/M
3300031744\|Ga0306918_10086575	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	11.21%
Terrestrial	Environmental → Terrestrial	88.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	7.76%
Sediment	Environmental → Aquatic → Sediment	3.45%
Soil	Environmental → Terrestrial → Soil	88.79%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	9.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.76%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.31%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.45%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M

Showing 1 to 10 of 103 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1005574773	3300005332	Tropical Forest Soil	PYSLGYNYQTGTLLTINSTSNSSSVVDSQEFKTRQTVGISSLSQFAIDVDNFTNIAVIADQNNNRVVFLAMPR*
Ga0066388_1013535312	3300005332	Tropical Forest Soil	LLTVNSTSNSSSVVDILNFRTRQTLGITSMSQFAVDVDTFSNVAVIADQNNNRLIFLEMPK*
Ga0066388_1060239783	3300005332	Tropical Forest Soil	TSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNVTNTAVIVDQNNNRVLIVGMPR*
Ga0066903_1048437973	3300005764	Tropical Forest Soil	NSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNVTNTAVIVDQNNNRVLIVGMPR*
Ga0066788_100477032	3300005944	Soil	NPYGVAYNYQTGVLLTINSTSDTSSIIDSQNFKTRETLGISSQSQFPVAMDNFSNTAIVVDQNNNRVLFLAMPK*
Ga0066790_105263652	3300005995	Soil	STSDTSSIIDSQNFKTRETLGISSQSQFPVAMDNFSNTAIVVDQNNNRVLFLAMPK*
Ga0075028_1002743841	3300006050	Watersheds	TQNAGSTSVVDTQTSKTRATLAISSQSQFAAAMQNLTNTAVMVDQNNNRLLMIPMPK*
Ga0075019_108449102	3300006086	Watersheds	PYSVGYNYQTGTLLTINSTSNSSSVVDVQNFKMRQTLGISSLSQFAIAVDNLTNIAVIVDQNNNRVVFLDLPK*
Ga0099829_106187231	3300009038	Vadose Zone Soil	NSSSVVDVQNFKMRQTLGISSLSQFAIAVDNLTNTAVIVDQNNNRVVFLNLPK*
Ga0099828_108784592	3300009089	Vadose Zone Soil	TLNSTSNTSSVIDSQNFKTRETLGISSQSQFAAAMDNLTNTAVIVDQNNNRVLFLAMPK*
Ga0116217_101817571	3300009700	Peatlands Soil	SNTSSIVDSQNLKSTQTLGISSQSQFAVAVDNWFNSAVIADQNNNRVLLLALPK*
Ga0126373_109629201	3300010048	Tropical Forest Soil	TLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR*
Ga0126370_107509622	3300010358	Tropical Forest Soil	TRNTLGIGSQSQFAAAVDNLTNTAVISDQNNNRVLILALPQ*
Ga0126379_104850661	3300010366	Tropical Forest Soil	YQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNMTNTAVIVDQNNNRVLIVALPR*
Ga0126381_1026596022	3300010376	Tropical Forest Soil	STSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNVTNTAVIVDQNNNRVLIVGMPR*
Ga0136449_1000002041	3300010379	Peatlands Soil	TLLTINSTSNTSSIVDSQNLKSTQTLGISSQSQFAVAVDNWFNSAVIADQNNNRVLLLALPK*
Ga0150983_107298322	3300011120	Forest Soil	LLTINSTSNSSSVVDVQNFTTRQTLGISSLSQFAIDVDNVTNTAVIVDQNNNRVVFLALPK*
Ga0137392_109781892	3300011269	Vadose Zone Soil	RVGVNPYSVGYNYQTGTLLTINSTSNSSSVVDSQNLKTRQTLGISSMSQFAIAVDNFTNTAVIVDQNNNRVVFLNLPK*
Ga0137389_114437222	3300012096	Vadose Zone Soil	GINPFSIAYNYQTGAMLTLNSTSNTSSVIDSQNFKTRETLGISSQSQFAAAMDNLTNTAVIVDQNNNRVLFLAMPK*
Ga0137360_101525653	3300012361	Vadose Zone Soil	VVDVQNFKMRQTLGISSLSQFAIDVDNLTNIAVIVDQNNNRVVFLALPK*
Ga0137395_101411361	3300012917	Vadose Zone Soil	NPFSVGYNYQTGTLLTINSTSNSSSVVDVQNFKMRQTLGISSLSQFAIDVDNLTNIAVIVDQNNNRVVFLALPK*
Ga0137394_100364361	3300012922	Vadose Zone Soil	NYQTGTLLTINSTSNTSSVVDSQNLKTRQTLGISSMSQFAIAVDNLTNTAVIVDQNNNRVVFLALPK*
Ga0137359_105263412	3300012923	Vadose Zone Soil	NYQTGTLLTINSTSNSSSVVDVQNFKMRQTLGISSLSQFAIDVDNLTNIAVIVDQNNNRVVFLALPK*
Ga0137404_101897503	3300012929	Vadose Zone Soil	VVDSQNLKTRQTLGISSMSQFAIAVDNLTNTAVIVDQNNNRVVFLNLPK*
Ga0137407_102199961	3300012930	Vadose Zone Soil	QTGTLLTINSTSNTSSVVDSQNLKTRQTLGISSLSQFAIAVDNFTNTAVIVDQNNNRVVFLNLPK*
Ga0126369_101418294	3300012971	Tropical Forest Soil	SLGYNYQTGTLLTINSTSNTSSIVDTVGAVSSVFATRNTLGIGSQSQFAAAVDNLTNTAVISDQNNNRVLILALPQ*
Ga0181539_13693642	3300014151	Bog	TINSTSNTSSIVDVQNLKTRQTLGITSQSQFAVAVDNWFNTAVIADQNNNRVLLLALPK*
Ga0137414_12170821	3300015051	Vadose Zone Soil	VGYNPQTGTLLTINSTSNSASLVDAQTFKTVDTLGITSQSQFAVAVDPFTNTAVIVDQNNNRVLGLALP*
Ga0137414_12615861	3300015051	Vadose Zone Soil	GYKYQTGTILTISSTSNSSTVVDVQNFKARQTLGISSLSQFAIAVDNFTNTAVIADQNNNRVVFLNLPK*
Ga0182036_105406822	3300016270	Soil	LGYNYQTGTLLTINSTSNTSSIVDTVGAVSSVFATRNTLGIGSQSQFAAAVDNLTNTALISDQNNNRVLILALPQ
Ga0182041_109451931	3300016294	Soil	ILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNMTNTAVIVDQNNNRVLIVALP
Ga0182035_119410231	3300016341	Soil	INPYSLGFNFQTGTLLTINSTSNTASVVDTQNFKTRQTLGITSLSQFAIDVDKLTNTSVIVDQNNNRVVFLAMPK
Ga0182034_101407551	3300016371	Soil	PIRVGVNPYSLGYNYQTGTLLTINSTSNTSSIVDTVGAVSSVFATRNTLGIGSQSQFAAAVDNLTNTALISDQNNNRVLILALPQ
Ga0182034_105179422	3300016371	Soil	TGTLLTINSTSNTASVVDAQNFKTRQTLGIASLSQFAIDVDKLTNTSVIVDQNNNRVVFLAMPK
Ga0182037_112484962	3300016404	Soil	NPDTSSTSRIPVGINPYSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLIMGMPR
Ga0182039_103706171	3300016422	Soil	TSNTSSVIDAQNFKTRETLGLSSQSQFAIDVDQFENTAVIVDQNNNRVLFLALPR
Ga0181505_111144861	3300016750	Peatland	QNLKTRQTLGISSQSQFAVAVDNWFNTAVIADQNNNRVLLLALPK
Ga0187818_100795771	3300017823	Freshwater Sediment	VGYNYQTGTLLTINSTSNTSSVIDAQNITTRQTLGISSQSQFAIAVDNWFNTAVIADQNNNRVILLALPK
Ga0187818_104578083	3300017823	Freshwater Sediment	STRDTLGIGSQSQFGVAIDNFTNTAIVADQNNDRILIIALPQ
Ga0187786_100479331	3300017944	Tropical Peatland	TINSTSNTASVVDTQNFKTRQTLGISSLSQFAIDVDKTTNTSVIVDQNNNRVVFLAMPK
Ga0187817_102691331	3300017955	Freshwater Sediment	AVNAPTFATRETLGISSQSQFAVAIDSLTNTAVMVDQNNDRALILPLPK
Ga0187804_102351171	3300018006	Freshwater Sediment	TGSTNQISVGVNPYSLGYNYQTGTLFTINSTSNTSSVIDTVNSGSGVFQTRETLGIASQSQFATAVDDYTNTAIIADQNNNRVLILALPR
Ga0187788_102374072	3300018032	Tropical Peatland	LIGVGVNPYSLGYNYQTGTLLAINSTSNTSSVIDVQNFKTRETLGISSQSQFAVDVDQFYNIGVIADQNNNRVLILALPK
Ga0187858_103539112	3300018057	Peatland	NFQTGTLLTINSTSNTSSIVDSQSLKSTQTLGISSQSQFAVAVDNWFNTAVIADQNNNRVLFLALPK
Ga0187772_111614522	3300018085	Tropical Peatland	TGTMLTINSTSNTSSVLDSQSLKSTQTLGISSQSQFALAVDNWFNSAVVVDQNNNRVLFLALPK
Ga0187769_103298491	3300018086	Tropical Peatland	LTINSTSNTSSIVDVQNLKTRQTLGITSQSQFALAVDNWFNTAVIADQNNNRVLLLALPK
Ga0187771_110889691	3300018088	Tropical Peatland	DTSSIIDTVGSANSFFSTRQTLGFASQSQFAVAVDNFTNTAIIADQNNNRALILALPR
Ga0187770_101281533	3300018090	Tropical Peatland	DAVGAGNSVFATRQTLGFASQSQFAVAVDNFTNTAIIADQNNNRILILALPR
Ga0187770_102285741	3300018090	Tropical Peatland	DAVSAPVFATRETLGISSQSQFAAAMDNFTNTAIIADQNNFRVLIFPMP
Ga0187798_10327861	3300019275	Peatland	PDSSSTTQIPVGVNPYSLGYNYQTGTLISINSTSDTSSIIDTVGSANSFFSTRQTLGFASQSQFAVAVDNFTNTAILADQNNNRALVLALPR
Ga0210399_107446081	3300020581	Soil	GTLLTINSTSNSSSVVDVQNFKMRQTLGISSMSQFAIAVDNFTNTAVIVDQNNNRVVFLNLPR
Ga0210406_110884042	3300021168	Soil	SSTVVDVQNFKARQTLGISSLSQFAIAVDNFTNTAVIADQNNNRVVFLNLPK
Ga0210396_112641602	3300021180	Soil	NSSSVVDVQNFKTRQTLGISSLSQFAIDVDNLTNIAVIVDQNNNRVVFLAMPH
Ga0210393_107151122	3300021401	Soil	VNAPTFATRATLGISSQSQFAVALDQFTNTALVADQNNNRVLLMPMPK
Ga0210387_102778651	3300021405	Soil	INSTSNSSSLVDSQNLKTRQTLGISSMSQFAIAVDNFTNTAVIVDQNNNRVVFLNLPK
Ga0210383_101124043	3300021407	Soil	VKTRATLGISSQSQFAAAMENFTNTVVMVDQNNNRMLMIPMAK
Ga0210394_110240692	3300021420	Soil	TLLTINSTSNSSSVVDVQNFKMRQTLGISSLSQFAIAVDNLTNIAVIVDQNNNRVVFLDLPK
Ga0210410_101244513	3300021479	Soil	NSTSNSSSVVDVQNFKTRQTLGISSLSQFAIDVDNLTNIGVIVDQNNNRVVFLAMPH
Ga0242662_100023272	3300022533	Soil	VGINPFSVGYNYQTGTLLTINSTSNSSSVVDVQNFKMRQTLGISSFSQFAIDVDNLTNIAVIVDQNNNRVVFLALPK
Ga0242662_100410082	3300022533	Soil	TSNSSSVVDSQNLKTWQTLGISSMSQFAIAVDNFTNTAVIVDQNNNRVVFLNLPK
Ga0247688_10104401	3300024186	Soil	FNYQTGTLLTINSTSNTASVVDTQNFKTRQTLGITSFSQFAIDVDKVTNTSVIVDQNNNRVVFLAMPK
Ga0247691_10116453	3300024222	Soil	PQTGTLLTINSTSNSASLVDVQTFKTVDTLGITSQSQFAIAVDPITNTAVIVDQNNNRVLGLALP
Ga0247679_10609381	3300024251	Soil	VDAQTFKTVDTLGITSQSQFAVAVDTITNTAVIVDQNNNRVLGLALP
Ga0208688_10298761	3300025480	Peatland	TSSIIDSQNLKTRQTLGISSQSQFAVAVDNWFNTAVIADQNNNRVLLLALPK
Ga0209849_10254131	3300026215	Soil	NPYGVAYNYQTGVLLTINSTSDTSSIIDSQNFKTRETLGISSQSQFPVAMDNFSNTAIVVDQNNNRVLFLAMPK
Ga0179593_12390875	3300026555	Vadose Zone Soil	VGINPFSVGYNYQTGTLLTINSTSNSSSVVDVQNFKMRQTLGISSLSQFAIDVDNLTNIAVIVDQNNNRVVFLALPK
Ga0179593_12393252	3300026555	Vadose Zone Soil	LTINSTSNSSSVVDVQNFKMRQTLGISSLSQFAIDVDNLTNIAVIVDQNNNRVVFLALPK
Ga0179587_106537831	3300026557	Vadose Zone Soil	SNSASLVDAQTFKTVDTLGITSQSQFAVAVDPFTNTAVIVDQNNNRVLGLALP
Ga0207742_1145241	3300026800	Tropical Forest Soil	PYSVGFNYQTGTLFTINSTSNTSSVIDSQNFKTRDTLSISSQSQFAIDVDQFENTAVIVDQNNNRVLFLALPR
Ga0207820_1142861	3300026809	Tropical Forest Soil	YNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLILGMPR
Ga0207805_10228582	3300026887	Tropical Forest Soil	QTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLILGMPR
Ga0207852_10014031	3300026959	Tropical Forest Soil	YQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLILGMPR
Ga0207806_10226591	3300027049	Tropical Forest Soil	NSTSDTSSLIDSQTFKTRETLGISSLSQFAAAMDNVTNTVVMVDQNNNRVILLGMPK
Ga0207826_11205091	3300027680	Tropical Forest Soil	SVGFNYQTGTLFTINSTSNTSSVIDSQNFKTRDTLSISSQSQFAIDVDQFENTAVIVDQNNNRVLFLALPR
Ga0209039_101157922	3300027825	Bog Forest Soil	ETLGISSLSQFPIAMDNLNSIGIVVDQNNNRVLFLPVPK
Ga0209701_101924351	3300027862	Vadose Zone Soil	LNSTSNTSSVIDSQNFKTRETLGISSQSQFAAAMDNLTNTAVIVDQNNNRVLFLAMPK
Ga0209067_104982921	3300027898	Watersheds	PYSVGYNYQTGTLLTINSTSNSSSVVDVQNFKMRQTLGISSLSQFAIAVDNLTNIAVIVDQNNNRVVFLDLPK
Ga0209698_104236082	3300027911	Watersheds	IRVGVNPYSVGYNYQTGTLLTINSTSNSSSVVDVQNFKMRQTLGISSLSQFAIAVDNLTNIAVIVDQNNNRVVFLDLPK
Ga0247684_10790902	3300028138	Soil	QTFKTVDTLGITSQSQFAIAVDPITNTAVIVDQNNNRVLGLALP
Ga0170818_1037627381	3300031474	Forest Soil	PDTGGVQTIRVGVNPFSLGYNYQTGTILTINSTSNSSTVVDVQNFKARQTLGISSLSQFAIAVDNFTNTAVIADQNNNRVVFLNLPK
Ga0310915_110431851	3300031573	Soil	LLSINSTSNTSSVIDAQNFKTRETLGLSSQSQFAIDVDQFENTAVIVDQNNNRVVFLALP
Ga0318574_108406431	3300031680	Soil	VPALFYVTSTQQNAVYAFNPDTSSTIRIPVGINPYSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR
Ga0307474_107598751	3300031718	Hardwood Forest Soil	VQTISVGINPFSLGFNYQTGTLLTINSTSNTASVVDTQNFKTRQTLGITSMSQFAIDVDKVTNTSVIVDQNNNRVVFLAMPK
Ga0306918_100865754	3300031744	Soil	DSQTFTTRETFGMTSQSQFGAAIDNMTNTAVIVDQNNNRVLILALPR
Ga0318537_103818451	3300031763	Soil	QTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR
Ga0318546_112317581	3300031771	Soil	TRIPVGINPYSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR
Ga0318529_103200522	3300031792	Soil	PDTSSTARIPVGINPYSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLIMGMPR
Ga0318576_103055721	3300031796	Soil	YSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR
Ga0318576_105619822	3300031796	Soil	GTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNMTNTAVIVDQNNNRVLIVALPR
Ga0318550_101902732	3300031797	Soil	SQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLIMGMPR
Ga0307478_101143141	3300031823	Hardwood Forest Soil	PYSIAYNYQTATILTVNSTSNTMSVIDSLNFTTRETLGITSQSQFAAAIDNMSNTAVIVDQNNNRALIVAMPR
Ga0310917_111847352	3300031833	Soil	TGTLLTINSTSNTASVVDTQNFKTRQTLGITSLSQFAIDVDKLTNTSVIVDQNNNRVVFLAMPK
Ga0306919_103865201	3300031879	Soil	SVNSTSNTMSVIDSQTSKTRGTLAIGSQSQFPAAMDNINNTAVIVDQNNDRVLMIPMPH
Ga0318544_103475351	3300031880	Soil	DTATATPIRVGVNPYSLGYNYQTGTLLTINSTSNTSSIVDTVGAVSSVFATRNTLGIGSQSQFAAAVDNLTNTAVISDQNNNRVLILALPQ
Ga0318522_102123162	3300031894	Soil	SSTSRIPVGINPYSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR
Ga0318551_108529501	3300031896	Soil	SNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR
Ga0318520_105449831	3300031897	Soil	QQNAVYSFNPDTSSTSRIPVGINPYSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR
Ga0318520_110951501	3300031897	Soil	SIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNLTNTAVIVDQNNNRVLILGMPR
Ga0306923_108796472	3300031910	Soil	NHYSVGFNYQTGTLLSINSTSNTSSVIDAQNFKTRETLGLSSQSQFAIDVDQFENTAVIVDQNNNRVVFLALPR
Ga0310913_104567612	3300031945	Soil	PYSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLIMGMPR
Ga0310909_101868053	3300031947	Soil	VGINPYSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLIMGMPR
Ga0306926_112772022	3300031954	Soil	VVDTQNFKTRQTLGITSLSQFAIDVDKLTNTSVIVDQNNNRVVFLAMPK
Ga0307479_101190581	3300031962	Hardwood Forest Soil	VDVQNFKMRQTLGISSLSQFAIAVDNLTNIAVIVDQNNNRVVFLDLPK
Ga0307479_101593614	3300031962	Hardwood Forest Soil	TGTLLTINSTSNSSSLVDAQTFKTENTLGITSQSQFAVAVDQITNTAVIVDQNNNRVLGLALP
Ga0318558_101335021	3300032044	Soil	YQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIENITNTAVIVDQNNNRVLIMGMPR
Ga0318518_100766972	3300032090	Soil	NYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNMTNTAVIVDQNNNRVLIVALPR
Ga0307472_1021573591	3300032205	Hardwood Forest Soil	VIDSQNFKTRETLGISSQSQFAAAMDNLTNTAVIVDQNNNRVLFLAMPK
Ga0306920_1007434513	3300032261	Soil	SQTFTTRETFGMTSQSQFGAAIDNMTNTAVIVDQNNNRVLIVEMPR
Ga0335082_104518872	3300032782	Soil	GVNPYSAGFNYQTGTLLTINSTSNTSSVIDAQNFKTRDTLGISSLSQFAIDVDQFENVGVIADQNNNRVVFLALPH
Ga0335081_115254331	3300032892	Soil	QTGTLLTINSTSNTSSVIDSQNFKTRDTIGISSLSQFAIDVDQYQNVSVIVDQNNNRVVFLAMPH
Ga0335081_127480692	3300032892	Soil	GYNYQTATLLSVNSTSNTSSLIDAQNFKTRNTLGISSLSQFAIDVDQFENISVIADQNNNRLVFLAMPN
Ga0335069_101178641	3300032893	Soil	TSTLLTINSTSNTASVVDSQNFKTRQTLGITSMSQFAIDVDNFTNIAVIADQNNNRVVFLAMPK
Ga0318519_103676492	3300033290	Soil	PFSIAYNYQTGTILTLNSTSNTMSVIDSQTFTTRETFGMTSQSQFGAAIDNMTNTAVIVDQNNNRVLIVALPR
Ga0318519_105962812	3300033290	Soil	VGAVSSVFATRNTLGIGSQSQFAAAVDNLTNTAVISDQNNNRVLILALPQ
Ga0314864_0173071_3_188	3300033805	Peatland	LLAINSTSNTSSVIDVQNFRTRETLGISSQSQFAVDVDQFYNTGVIADQNNNRVLILALP
Ga0314861_0287140_582_746	3300033977	Peatland	SNTSSIVDSQNLKTRQTLGITSQSQFAVAVDNWFNTAVIADQNNNRVLLLALPK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078163

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences