Metagenome / Metatranscriptome Family F078124

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078124
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	42 residues
Representative Sequence	AAEQTKADVLVIGHNPLRGHLGDNGNGYGIIRESHIPVLSV
Number of Associated Samples	96
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.45 %
% of genes near scaffold ends (potentially truncated)	94.83 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.207 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (20.690 % of family members)
Environment Ontology (ENVO)	Unclassified (46.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (39.655 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 20.29% Coil/Unstructured: 79.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13453	zf-TFIIB	8.62
PF00072	Response_reg	7.76
PF09851	SHOCT	6.90
PF00690	Cation_ATPase_N	3.45
PF02781	G6PD_C	3.45
PF00231	ATP-synt	2.59
PF10091	Glycoamylase	2.59
PF00121	TIM	2.59
PF04972	BON	1.72
PF02321	OEP	1.72
PF01339	CheB_methylest	1.72
PF00582	Usp	1.72
PF02585	PIG-L	1.72
PF00403	HMA	0.86
PF00342	PGI	0.86
PF13460	NAD_binding_10	0.86
PF01904	DUF72	0.86
PF11964	SpoIIAA-like	0.86
PF00871	Acetate_kinase	0.86
PF08282	Hydrolase_3	0.86
PF02518	HATPase_c	0.86
PF00487	FA_desaturase	0.86
PF08240	ADH_N	0.86
PF01988	VIT1	0.86
PF02790	COX2_TM	0.86
PF00346	Complex1_49kDa	0.86
PF00702	Hydrolase	0.86
PF00005	ABC_tran	0.86
PF00589	Phage_integrase	0.86
PF08327	AHSA1	0.86
PF09209	CecR_C	0.86
PF01262	AlaDh_PNT_C	0.86
PF11154	DUF2934	0.86
PF11737	DUF3300	0.86
PF03572	Peptidase_S41	0.86
PF01739	CheR	0.86
PF13592	HTH_33	0.86
PF05239	PRC	0.86
PF01292	Ni_hydr_CYTB	0.86
PF00923	TAL_FSA	0.86
PF03976	PPK2	0.86
PF04041	Glyco_hydro_130	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	3.45
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	3.45
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	3.45
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	3.45
COG0224	FoF1-type ATP synthase, gamma subunit	Energy production and conversion [C]	2.59
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	2.59
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.72
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	1.72
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.72
COG3038	Cytochrome b561	Energy production and conversion [C]	0.86
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.86
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.86
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.86
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.86
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.86
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.86
COG3426	Butyrate kinase	Energy production and conversion [C]	0.86
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.86
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.86
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.86
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.86
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.86
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.86
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.86
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.86
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.86
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.86
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.86
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.86
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.86
COG0282	Acetate kinase	Energy production and conversion [C]	0.86
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.86
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.21 %
Unclassified	root	N/A	38.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.21 %
Unclassified	root	N/A	38.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.21 %
Unclassified	root	N/A	38.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.86 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.59 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.72 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	1.72 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.86 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.86 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.86 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.86 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	1.72 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.86 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.86 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.86 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.86 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.86 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.86 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.86 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.86 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.72 %
Silvimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas	1.72 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.86 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.86 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.86 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.86 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.86 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.86 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.86 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.86 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.86 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.72 %
Silvimonas terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	1.72 %
Sphingomonas ginsenosidivorax	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax	0.86 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.86 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.86 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.86 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.86 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.86 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.86 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.86 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.86 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.72 %
Silvimonas terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	1.72 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.86 %
Sphingomonas ginsenosidivorax	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax	0.86 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.86 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.86 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.86 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.86 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.86 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.86 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.86 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005541\|Ga0070733_10008527	All Organisms → cellular organisms → Bacteria	6537	Open in IMG/M
3300005541\|Ga0070733_10854578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	611	Open in IMG/M
3300005563\|Ga0068855_100780750	Not Available	1016	Open in IMG/M
3300009518\|Ga0116128_1222264	Not Available	528	Open in IMG/M
3300009621\|Ga0116116_1045874	All Organisms → cellular organisms → Bacteria → Acidobacteria	1345	Open in IMG/M
3300009623\|Ga0116133_1022744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	1550	Open in IMG/M
3300009623\|Ga0116133_1023808	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300009632\|Ga0116102_1062741	All Organisms → cellular organisms → Bacteria → Acidobacteria	1134	Open in IMG/M
3300009637\|Ga0116118_1150942	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300009640\|Ga0116126_1109409	Not Available	971	Open in IMG/M
3300009643\|Ga0116110_1056270	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300009645\|Ga0116106_1294682	Not Available	516	Open in IMG/M
3300009665\|Ga0116135_1160328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	844	Open in IMG/M
3300009764\|Ga0116134_1354586	Not Available	503	Open in IMG/M
3300010379\|Ga0136449_100067151	All Organisms → cellular organisms → Bacteria → Proteobacteria	7755	Open in IMG/M
3300014151\|Ga0181539_1030402	All Organisms → cellular organisms → Bacteria → Acidobacteria	2802	Open in IMG/M
3300014153\|Ga0181527_1040940	All Organisms → cellular organisms → Bacteria	2602	Open in IMG/M
3300014155\|Ga0181524_10298721	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300014156\|Ga0181518_10090215	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300014156\|Ga0181518_10190303	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300014160\|Ga0181517_10599981	Not Available	551	Open in IMG/M
3300014161\|Ga0181529_10179485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300014165\|Ga0181523_10062061	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300014167\|Ga0181528_10261787	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300014200\|Ga0181526_10127775	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300014489\|Ga0182018_10106916	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300014490\|Ga0182010_10444581	Not Available	711	Open in IMG/M
3300014491\|Ga0182014_10496102	Not Available	599	Open in IMG/M
3300014493\|Ga0182016_10020356	All Organisms → cellular organisms → Bacteria → Acidobacteria	5946	Open in IMG/M
3300014493\|Ga0182016_10137972	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300014493\|Ga0182016_10843862	Not Available	508	Open in IMG/M
3300014495\|Ga0182015_10195588	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300014495\|Ga0182015_10944586	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	538	Open in IMG/M
3300014501\|Ga0182024_10695801	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300014501\|Ga0182024_11723170	Not Available	705	Open in IMG/M
3300014501\|Ga0182024_12099846	Not Available	621	Open in IMG/M
3300014658\|Ga0181519_10882305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	554	Open in IMG/M
3300014838\|Ga0182030_10343599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1602	Open in IMG/M
3300014838\|Ga0182030_10753038	Not Available	901	Open in IMG/M
3300016702\|Ga0181511_1319870	Not Available	758	Open in IMG/M
3300016750\|Ga0181505_10606724	Not Available	571	Open in IMG/M
3300017929\|Ga0187849_1321924	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300017988\|Ga0181520_11091494	Not Available	525	Open in IMG/M
3300017996\|Ga0187891_1175246	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300017998\|Ga0187870_1244604	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300018003\|Ga0187876_1104314	Not Available	1047	Open in IMG/M
3300018008\|Ga0187888_1356852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300018009\|Ga0187884_10460104	Not Available	511	Open in IMG/M
3300018014\|Ga0187860_1113688	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300018030\|Ga0187869_10177869	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300018033\|Ga0187867_10443705	Not Available	717	Open in IMG/M
3300018033\|Ga0187867_10710606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	547	Open in IMG/M
3300018034\|Ga0187863_10877354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300018043\|Ga0187887_10208939	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300018044\|Ga0187890_10054592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2372	Open in IMG/M
3300019082\|Ga0187852_1407420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300019787\|Ga0182031_1339694	Not Available	1148	Open in IMG/M
3300019788\|Ga0182028_1534116	Not Available	1412	Open in IMG/M
3300020583\|Ga0210401_10568933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	995	Open in IMG/M
3300022733\|Ga0224562_1014230	Not Available	641	Open in IMG/M
3300023101\|Ga0224557_1110635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1088	Open in IMG/M
3300025312\|Ga0209321_10264298	Not Available	858	Open in IMG/M
3300025442\|Ga0208034_1073274	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300025444\|Ga0208189_1042183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	887	Open in IMG/M
3300025446\|Ga0208038_1071367	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300025453\|Ga0208455_1017716	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300025453\|Ga0208455_1064337	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300025498\|Ga0208819_1050740	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300025506\|Ga0208937_1101194	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300025911\|Ga0207654_10157579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1463	Open in IMG/M
3300025981\|Ga0207640_11866525	Not Available	544	Open in IMG/M
3300026222\|Ga0209862_1050484	Not Available	750	Open in IMG/M
3300026456\|Ga0255351_1006122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	3744	Open in IMG/M
3300027908\|Ga0209006_11022010	Not Available	656	Open in IMG/M
3300028090\|Ga0255349_1009214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2664	Open in IMG/M
3300028748\|Ga0302156_10338688	Not Available	666	Open in IMG/M
3300028759\|Ga0302224_10203716	Not Available	784	Open in IMG/M
3300028795\|Ga0302227_10378788	Not Available	537	Open in IMG/M
3300028798\|Ga0302222_10089691	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300028798\|Ga0302222_10370092	Not Available	559	Open in IMG/M
3300028800\|Ga0265338_10395056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	987	Open in IMG/M
3300028866\|Ga0302278_10107735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1534	Open in IMG/M
3300028874\|Ga0302155_10110026	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300028882\|Ga0302154_10071117	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300029939\|Ga0311328_10957159	Not Available	561	Open in IMG/M
3300029943\|Ga0311340_10094796	All Organisms → cellular organisms → Bacteria → Acidobacteria	3310	Open in IMG/M
3300029952\|Ga0311346_10148647	All Organisms → cellular organisms → Bacteria → Acidobacteria	2787	Open in IMG/M
3300029953\|Ga0311343_10018985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9718	Open in IMG/M
3300029999\|Ga0311339_10376973	Not Available	1489	Open in IMG/M
3300030007\|Ga0311338_10198505	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300030020\|Ga0311344_10228544	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1872	Open in IMG/M
3300030044\|Ga0302281_10127492	Not Available	1139	Open in IMG/M
3300030054\|Ga0302182_10225552	Not Available	798	Open in IMG/M
3300030057\|Ga0302176_10165886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	877	Open in IMG/M
3300030058\|Ga0302179_10509554	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300030520\|Ga0311372_10373214	Not Available	2185	Open in IMG/M
3300030520\|Ga0311372_13047732	Not Available	505	Open in IMG/M
3300030524\|Ga0311357_10433939	Not Available	1234	Open in IMG/M
3300030524\|Ga0311357_11491220	Not Available	573	Open in IMG/M
3300030580\|Ga0311355_10754761	Not Available	898	Open in IMG/M
3300030580\|Ga0311355_11023617	Not Available	741	Open in IMG/M
3300030580\|Ga0311355_11772932	Not Available	525	Open in IMG/M
3300030617\|Ga0311356_12013273	Not Available	510	Open in IMG/M
3300030688\|Ga0311345_10172003	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300031233\|Ga0302307_10111024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	1432	Open in IMG/M
3300031236\|Ga0302324_102306062	Not Available	664	Open in IMG/M
3300031236\|Ga0302324_103204605	Not Available	538	Open in IMG/M
3300031240\|Ga0265320_10499726	Not Available	537	Open in IMG/M
3300031525\|Ga0302326_10547285	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300031525\|Ga0302326_11720808	Not Available	826	Open in IMG/M
3300031525\|Ga0302326_12870473	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031708\|Ga0310686_115756553	All Organisms → cellular organisms → Bacteria	3341	Open in IMG/M
3300031708\|Ga0310686_116056293	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300033824\|Ga0334840_088638	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300034091\|Ga0326724_0368039	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300034124\|Ga0370483_0340975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.69%
Host-Associated	Host-Associated	4.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.03%
Aquatic	Environmental → Aquatic	39.66%
Plants	Host-Associated → Plants	4.31%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	39.66%
Peat	Environmental → Terrestrial → Peat	33.62%
Soil	Environmental → Terrestrial → Soil	22.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	39.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	33.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%
Loam	Environmental → Terrestrial → Soil → Loam	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	33.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.14%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	15.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	20.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	15.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.34%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	7.76%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.03%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.72%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.86%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.86%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025446	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026222	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070733_100085271	3300005541	Surface Soil	EQTKGDLLVIGHMPSGGHLGENGSGYAIIRESHIPVLSVLGPMQRGS*
Ga0070733_108545783	3300005541	Surface Soil	AAEQTNADVLVIGHSPGRSHLGDNREGYGIIPESRIPVLSI*
Ga0068855_1007807501	3300005563	Corn Rhizosphere	EADVLVIGHIPGRGHLGDNGKGYTIIRASQIPVLSV*
Ga0116128_12222641	3300009518	Peatland	EQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV*
Ga0116116_10458741	3300009621	Peatland	DVLVIGHSPVRGHLGDNGNGYGIIRESHIPVLSV*
Ga0116133_10227442	3300009623	Peatland	RAAEEAKADLLIIGHMPSGGHLGENGSGYAIIRESHIPVLSV*
Ga0116133_10238081	3300009623	Peatland	ADLLVIGHMPSGGHLGANGGGYAIIRESHIPVLSV*
Ga0116102_10627411	3300009632	Peatland	QTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV*
Ga0116118_11509421	3300009637	Peatland	AAEQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV*
Ga0116126_11094093	3300009640	Peatland	NRAAEQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV*
Ga0116110_10562704	3300009643	Peatland	LNRTAEQTKADVLVIGHIPSGGHLGANGSGYAIIRKSRVPVLLISA*
Ga0116106_12946821	3300009645	Peatland	GNVPELLNRAAEETKADLLVIGHMPSGGHLGANGSGYAIIRESHIPVLSV*
Ga0116135_11603283	3300009665	Peatland	DVLVIGRGPGRHHLGDNGEGYGIIRESRIPVLSV*
Ga0116134_13545861	3300009764	Peatland	SGNVPELLNRAAEQTKADVLVIGHLPSDGHLGANGGGYAIIRESHIPVLSV*
Ga0136449_1000671518	3300010379	Peatlands Soil	AAEQTKADVLVIGHNPLRGHLGDNGNGYGIIRESHIPVLSV*
Ga0181539_10304021	3300014151	Bog	RAAEQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV*
Ga0181527_10409401	3300014153	Bog	TKADVLVIGHSPGRSHLGDNGEGYGIIRESHIPVLSVCFP*
Ga0181524_102987212	3300014155	Bog	PELLNRAAEQTKADVLVIGHSPGRSHLGDNGEGYGIIRESQIPVLSVCFS*
Ga0181518_100902153	3300014156	Bog	TKADLLVIGHMPSGGHLGANGGGYAIIRESHIPVLSV*
Ga0181518_101903032	3300014156	Bog	LNRAAEQTKADVLVIGHSPGRSHLGDNGEGYGIIRESQIPVLSVCFS*
Ga0181517_105999811	3300014160	Bog	ADVLVIGHSSVYEHLGANGNGYGIIRASRIPVLSV*
Ga0181529_101794851	3300014161	Bog	DLLVIGHSPGRSHLGDNGEGYGIIRESRIPVLSV*
Ga0181523_100620611	3300014165	Bog	EQTKADVLVIGHSPGRSHLGDNGEGYGIIRESHIPVLSVCFP*
Ga0181528_102617871	3300014167	Bog	AETTSADLLVVGRIPGRSHMGDNGDGYGIIRESRIPVLSV*
Ga0181526_101277751	3300014200	Bog	NVHNLLQRAAEQTQSDLLVIGHMPAGGHLGANGSGYAIIRDSHVPVLST*
Ga0182018_101069162	3300014489	Palsa	MSGLLNRAAEEANADLLMIGHMPSGGHLGENGSGYVIIRESHIPVLSV*
Ga0182010_104445811	3300014490	Fen	QTKADVLVIGHSPGRSHLGDNGEGYGIIRESQIPVLSVCFS*
Ga0182014_104961022	3300014491	Bog	ELLNRAAEQARADVMVVGRSPGRNHLGDNGEGYGIIRESHIPVLSA*
Ga0182016_100203561	3300014493	Bog	KADVLIIGHIPGRSHLGDNGEGYGIIRESRIPVLSV*
Ga0182016_101379721	3300014493	Bog	PELLNRAADHTNADVLVIGHSSVYEHLGANGNGYGIIRASRIPVLSV*
Ga0182016_108438621	3300014493	Bog	DVLVIGHRTVYGHLGENGNGYGIIRSSRIPVLSV*
Ga0182015_101955882	3300014495	Palsa	MSGLLNRAAEEANADLLIIGHMPYGGHLGENGSGYVIIRESHIPVLSV*
Ga0182015_109445861	3300014495	Palsa	LNRAAEQTKADVLVIGHIPGRSHLGDNGNGYGIIRASRIPVLSV*
Ga0182024_106958011	3300014501	Permafrost	NVPELLNRAAEETKADLLVIGHMPSGGHLGANGSGYAIIREAHIPVLSV*
Ga0182024_117231702	3300014501	Permafrost	AAEQTKADVLVIGHIPGRSHFHLGDNGNCYGIIRESHIQVLSV*
Ga0182024_120998461	3300014501	Permafrost	NVPELLNRAAEETKADLLVIGHMPSGGHLGANGSGYAIIRESHIPVLSV*
Ga0181519_108823052	3300014658	Bog	LPALNRAVEHAKSDLLVIGHLPSGGHLGANGAGYAVIRDSHIPVLSL*
Ga0182030_103435993	3300014838	Bog	AAERTKADVLVIGHIPGRSHLGDNGEGYGIIRKSRIPVLSI*
Ga0182030_107530383	3300014838	Bog	AKQTKADVLIIGYIPGRSHLGDNGEGYGIIRESRIPVLSV*
Ga0181511_13198701	3300016702	Peatland	RAAEEAKADLLIIGHMPSGGHLGENGSGYAIIRESHIPVLSV
Ga0181505_106067242	3300016750	Peatland	LNRAAEEAKADLLIIGHMPSGGHLGENGSGYAIIRESHIPVLSV
Ga0187849_13219241	3300017929	Peatland	ADLLVIGHMPSGGHLGANGSGYAIIRESHIPVLSV
Ga0181520_110914943	3300017988	Bog	PELLNRAAEQTKADVLVIGHSPGRSHLGDNGEGYGIIRESHIPVLSVYFS
Ga0187891_11752461	3300017996	Peatland	EQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV
Ga0187870_12446041	3300017998	Peatland	AAEQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV
Ga0187876_11043141	3300018003	Peatland	NRAAEQTEADVLVIGHSPGQSHLGDNGEGYGIIRESHIPVLSVCFS
Ga0187888_13568521	3300018008	Peatland	VPELLNRAAEQTKADVLVTGHSPGRSHLGDNGEGYGIIRESHIPVLSV
Ga0187884_104601041	3300018009	Peatland	KADLLIIGHMPSGGHLGENGSGYAIIRESHIPVLSV
Ga0187860_11136881	3300018014	Peatland	KADLLVIGHMPSGGHLGANGSGYAIIRESHIPVLNV
Ga0187869_101778692	3300018030	Peatland	EQTEADALVIGHIPGRSHLGDNGNGYGIIRESHIPVLSV
Ga0187867_104437051	3300018033	Peatland	TKADVLVIGHVPAGGHLGANGSGYAIIRESRVPVLSV
Ga0187867_107106061	3300018033	Peatland	QTSADVLVIGHSPGRGHLGDNGNGYGIIRESLIPVLSV
Ga0187863_108773541	3300018034	Peatland	NRAVDQAKGDVLVIGHMPSGGHLGENGSGYAIIRESHIPVMSV
Ga0187887_102089391	3300018043	Peatland	KADVLVIGHSPVRGHLGDNGNGYGIIRESHIPVLSV
Ga0187890_100545921	3300018044	Peatland	AAEQTKADVLVIGHSPGRSHLGDNGEGYGIIRESHIPVLNV
Ga0187852_14074202	3300019082	Peatland	PELLNRAAEQTKADVLVTGHSPGRSHLGDNGEGYGIIRESHIPVLSV
Ga0182031_13396942	3300019787	Bog	DHTKSDLLVIGHMPPGGHLGENASGYSIIRGSHIPVLSL
Ga0182028_15341161	3300019788	Fen	WAAEQTKADVLVTGTAWAKPSGDNGEGYGIIRESHIPVLSV
Ga0210401_105689331	3300020583	Soil	NVPELLNRVAERTKVDVPVIGHIPGRSHLGDSGNGYGIIRESHIPVLSV
Ga0224562_10142301	3300022733	Soil	NQAAERAKADLLVIGHMPSGGHLGANGSGYAIIRESHIPVLSV
Ga0224557_11106353	3300023101	Soil	VDQTKGDVLVIGHMPSGGHLGENGSGYAIIRESHIPVLSV
Ga0209321_102642982	3300025312	Soil	ADLLVVGRNPSTGHLRGTGYGIIRESHIPVVSVCRPQVEEL
Ga0208034_10732741	3300025442	Peatland	VPELLNRAAEQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV
Ga0208189_10421832	3300025444	Peatland	ELLNRAAEQTKADVLVIGYSPLRGHLGDNGNGYGIIRESHLPVLSV
Ga0208038_10713671	3300025446	Peatland	NRAAEQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV
Ga0208455_10177163	3300025453	Peatland	ETKADLLVIGHMPSGGHLGANGGGYAIIRESHIPVLSV
Ga0208455_10643372	3300025453	Peatland	AEQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV
Ga0208819_10507402	3300025498	Peatland	TKADLLVIGHMPSGGHLGANGSGYAIIRESHIPVLSV
Ga0208937_11011941	3300025506	Peatland	RAAEQTKADVLVIGHLPSGGHLGANGGGYAIIRESHIPVLSV
Ga0207654_101575793	3300025911	Corn Rhizosphere	EADVLVIGHIPGRSHLGDNGNGYTIIRASQIPVLSV
Ga0207640_118665251	3300025981	Corn Rhizosphere	TEADVLVIGHIPGRSHLGDNGNGYTIIRASQIPVLSV
Ga0209862_10504842	3300026222	Permafrost Soil	EQLNRAAERTNADVLVIGHSPQRGHLGDNGNGYGLIRESRIPVLSV
Ga0255351_10061225	3300026456	Soil	DSGNVCKLLNRAVDQAKGDVLVIGHMPSGGHLGENGSGYAIIRESHIPVMSV
Ga0209006_110220102	3300027908	Forest Soil	NRATAKTKADVLIIGHLPSGGHLGENGSGYGIIRQSHIPVLSVLGPAK
Ga0255349_10092144	3300028090	Soil	IDSGNVCKRLNRAVDQAKGDVLVIGHMPSGGHLGENGSGYAIIRESHIPVMSV
Ga0302156_103386881	3300028748	Bog	LLSAAAERTGADVLVIGHRPGRSHLGDNGNGYGIIRESRIPVLSV
Ga0302224_102037161	3300028759	Palsa	DNVPELLNRVAEQTEADVLVIGHIPGRSHLGDNGNGYGIIRASQIPVLSV
Ga0302227_103787882	3300028795	Palsa	LLVIGHLPSGGHLGENGSGYGIIRQSHIPVLSVLGPQNRV
Ga0302222_100896912	3300028798	Palsa	DLLNRAAEQTKADVLVIGHIPGRSHLGDNGNGYGIIRASRIPVLSV
Ga0302222_103700922	3300028798	Palsa	RAAEQTEADVLVIGHIPGRSHLGDNGNGYGIIRASQIPVLSV
Ga0265338_103950561	3300028800	Rhizosphere	AEQTKADLLVIGHIPGRSHLGDNGNGYGLIVRSQIPVLSV
Ga0302278_101077354	3300028866	Bog	LLIRAAEQTKADLLIIGHIPGRSHLGDNGEGYGIIRESRIPVLSV
Ga0302155_101100261	3300028874	Bog	VLHLLNQAAEQTKADLLVIGHSPVRGHLGDNGNGYAIIRESRIPVLSV
Ga0302154_100711171	3300028882	Bog	AGQTKADVLIIGHIPGRSHLGDNGEGYGIIRESRIPVLSV
Ga0311328_109571591	3300029939	Bog	SGDVHQLLNRAAEQSKGDLLVIGHFPPGGHLGANHSGYGIIRESHIPVLSV
Ga0311340_100947962	3300029943	Palsa	LNRAAEQTKADVLVIGHIPGRSHLGDNGNGYGIIRASRIPVLSV
Ga0311346_101486471	3300029952	Bog	HLDSIIRETQADVLVLGHNPGRGHLGDNGEGYEIIRTSPVPVLSV
Ga0311343_1001898511	3300029953	Bog	KAKGDVLVLGHMPCGGHLGENGSGYGIIRESHIPVLSV
Ga0311339_103769732	3300029999	Palsa	LKRAAEKIMADVLVIGHKLGRSHLGDNGNGYGIIRESSIPVLSV
Ga0311338_101985053	3300030007	Palsa	MAPAAEQTKADVLVVGHTPGRSHLGDNGNGYGIIRESRIPVLSV
Ga0311344_102285441	3300030020	Bog	KADVLVIGHIPGRSHLGDNGNGYGIIRASRIPVLSV
Ga0302281_101274923	3300030044	Fen	SAAAERTGADVLVIGHRPGRSHLGDNGNGYGIIRESRIPVLSV
Ga0302182_102255522	3300030054	Palsa	AAEQTKADVLVIGHIPGRSHLGDNGNGYGIIRASQIPVLSV
Ga0302176_101658861	3300030057	Palsa	LLVIGHLPSGGHLGENGSGYGIIRQSRIPVLSVLGPQNRV
Ga0302179_105095541	3300030058	Palsa	VIGHFVIGHFPSGGHLGTTHCGYGIIRESHIPVLSV
Ga0311372_103732144	3300030520	Palsa	GELLNRAAEQTEADVLVIGHIPGRSHLGDNGNGYGIIRASQIPVLSV
Ga0311372_130477322	3300030520	Palsa	TKADVLVIGHIPGRSHLGDNSNGYGIIRESHIPVLSI
Ga0311357_104339391	3300030524	Palsa	EQTKADVLVIGHIPGRSHLGDNGNGYGIIRASQIPVLSV
Ga0311357_114912202	3300030524	Palsa	QAAEQVKADLLIIGHMPSGGHLGENGSGYAMIRQSHIPVLSV
Ga0311355_107547611	3300030580	Palsa	TKADVLVIGHIPGRSHLGDNGNGYGIIRASQIPVLSV
Ga0311355_110236171	3300030580	Palsa	HKLLNQAAEQVKTDLLIIGHLPSGGHLGENGSGYAMIRQSHIPVLSV
Ga0311355_117729321	3300030580	Palsa	VPELLRRAAEQTKADVLVIGHIPGRSHLGDNSNGYGIIRESHIPVLSI
Ga0311356_120132731	3300030617	Palsa	HEMLNRAAERAKGDLLVIGHLPPTGHLGANGGGYSIIRDSHIPVLSV
Ga0311345_101720034	3300030688	Bog	PEALNRAAVQTKADVLMIGHIPSGGHLGANGSGYSIIRDSQVPVLSV
Ga0302307_101110241	3300031233	Palsa	RAAAQTKADLLVIGHLPSGGHLGENGSGYGIIRQSHIPVLSVLGPQNRV
Ga0302324_1023060621	3300031236	Palsa	AAQTKADVLIIGHTPGRSHLGDNGEGYGIIRESRIPVLSV
Ga0302324_1032046051	3300031236	Palsa	HLPSGGHLGENGSGYGIIRQSHIPVLSVLGPQNRV
Ga0265320_104997262	3300031240	Rhizosphere	KADLLVIGHLPSGGHLGENGSGYGIIRQSHIPVLSVLGPQNRV
Ga0302326_105472853	3300031525	Palsa	NRAAEQTKADVLIIGHTPGRSHLGDNGEGYGIIRESRIPVLSV
Ga0302326_117208081	3300031525	Palsa	LNRAAELAGSDLLVIGHLPSNGHLGANGAGYAIARESCIPVLRV
Ga0302326_128704732	3300031525	Palsa	SGDVHKLLNHAAEQSKSDVLVVGHLPPGGHLGENGSGYGIIRESHIPVLSL
Ga0310686_1157565531	3300031708	Soil	SGDVHKMLNQAAEQTKGDLLVIGHLPPGGHLGANGNGYGIIRESRIPVLSV
Ga0310686_1160562932	3300031708	Soil	NVPELLKRAAEQTGADVLIIGHIPGRSHLGDNGNGYGIIRVSQIPVLSV
Ga0334840_088638_1_123	3300033824	Soil	AERIKADVLVIGRSPGRHHLGDNGEGYGIIRESRIPVLSV
Ga0326724_0368039_657_773	3300034091	Peat Soil	HTKADVLVIGHSPIRGHLGDNGNGYGIIRESHIPVLSV
Ga0370483_0340975_168_320	3300034124	Untreated Peat Soil	LKVHELLNRAAEQANGDLLGIGHMPSGGHLGANGSGYAIIRESHIPVLSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078124

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences