Metagenome / Metatranscriptome Family F078110

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078110
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	47 residues
Representative Sequence	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQAPEAFLPDSA
Number of Associated Samples	80
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	93.10 %
% of genes from short scaffolds (< 2000 bps)	96.55 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.138 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (61.207 % of family members)
Environment Ontology (ENVO)	Unclassified (89.655 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (81.034 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.99% β-sheet: 0.00% Coil/Unstructured: 87.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF12796	Ank_2	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
All Organisms	root	All Organisms	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
cellular organisms	root	All Organisms → cellular organisms	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.14 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005330\|Ga0070690_100681999	Not Available	787	Open in IMG/M
3300005617\|Ga0068859_101388741	Not Available	774	Open in IMG/M
3300005617\|Ga0068859_102499708	Not Available	569	Open in IMG/M
3300005719\|Ga0068861_102158562	Not Available	557	Open in IMG/M
3300005841\|Ga0068863_102429454	Not Available	533	Open in IMG/M
3300005842\|Ga0068858_102414367	Not Available	519	Open in IMG/M
3300005843\|Ga0068860_102626736	Not Available	523	Open in IMG/M
3300005844\|Ga0068862_101599949	Not Available	658	Open in IMG/M
3300009553\|Ga0105249_13029374	Not Available	540	Open in IMG/M
3300009972\|Ga0105137_110630	Not Available	508	Open in IMG/M
3300009975\|Ga0105129_117463	Not Available	540	Open in IMG/M
3300009981\|Ga0105133_113688	Not Available	652	Open in IMG/M
3300009989\|Ga0105131_103555	Not Available	1108	Open in IMG/M
3300009989\|Ga0105131_127422	Not Available	594	Open in IMG/M
3300009992\|Ga0105120_1052360	Not Available	518	Open in IMG/M
3300009994\|Ga0105126_1055717	Not Available	506	Open in IMG/M
3300009995\|Ga0105139_1052563	Not Available	721	Open in IMG/M
3300009995\|Ga0105139_1124186	Not Available	501	Open in IMG/M
3300010396\|Ga0134126_11879285	Not Available	656	Open in IMG/M
3300014968\|Ga0157379_12390220	Not Available	527	Open in IMG/M
3300015284\|Ga0182101_1015715	Not Available	904	Open in IMG/M
3300015284\|Ga0182101_1048363	Not Available	645	Open in IMG/M
3300015290\|Ga0182105_1030181	Not Available	771	Open in IMG/M
3300015309\|Ga0182098_1048927	Not Available	701	Open in IMG/M
3300015309\|Ga0182098_1048930	Not Available	701	Open in IMG/M
3300015309\|Ga0182098_1086766	Not Available	579	Open in IMG/M
3300015310\|Ga0182162_1078079	Not Available	609	Open in IMG/M
3300015310\|Ga0182162_1127767	Not Available	506	Open in IMG/M
3300015311\|Ga0182182_1084905	Not Available	575	Open in IMG/M
3300015311\|Ga0182182_1089299	Not Available	565	Open in IMG/M
3300015313\|Ga0182164_1086442	Not Available	602	Open in IMG/M
3300015315\|Ga0182120_1042496	Not Available	781	Open in IMG/M
3300015319\|Ga0182130_1088623	Not Available	593	Open in IMG/M
3300015320\|Ga0182165_1065941	Not Available	687	Open in IMG/M
3300015324\|Ga0182134_1140649	Not Available	513	Open in IMG/M
3300015325\|Ga0182148_1040612	Not Available	797	Open in IMG/M
3300015325\|Ga0182148_1055731	Not Available	717	Open in IMG/M
3300015325\|Ga0182148_1134413	Not Available	519	Open in IMG/M
3300015327\|Ga0182114_1143033	Not Available	530	Open in IMG/M
3300015330\|Ga0182152_1094871	Not Available	612	Open in IMG/M
3300015335\|Ga0182116_1050369	Not Available	843	Open in IMG/M
3300015335\|Ga0182116_1076550	Not Available	721	Open in IMG/M
3300015336\|Ga0182150_1069696	Not Available	707	Open in IMG/M
3300015336\|Ga0182150_1085177	Not Available	657	Open in IMG/M
3300015337\|Ga0182151_1151873	Not Available	522	Open in IMG/M
3300015337\|Ga0182151_1159917	Not Available	511	Open in IMG/M
3300015339\|Ga0182149_1086744	Not Available	670	Open in IMG/M
3300015339\|Ga0182149_1102718	Not Available	627	Open in IMG/M
3300015339\|Ga0182149_1142504	Not Available	547	Open in IMG/M
3300015348\|Ga0182115_1279775	Not Available	528	Open in IMG/M
3300015349\|Ga0182185_1114723	Not Available	783	Open in IMG/M
3300015349\|Ga0182185_1181165	Not Available	634	Open in IMG/M
3300015350\|Ga0182163_1179925	Not Available	661	Open in IMG/M
3300015352\|Ga0182169_1078046	Not Available	1038	Open in IMG/M
3300015352\|Ga0182169_1229123	Not Available	605	Open in IMG/M
3300015352\|Ga0182169_1315463	Not Available	501	Open in IMG/M
3300015353\|Ga0182179_1125123	Not Available	787	Open in IMG/M
3300015353\|Ga0182179_1198860	Not Available	638	Open in IMG/M
3300015353\|Ga0182179_1198941	Not Available	637	Open in IMG/M
3300015353\|Ga0182179_1316118	Not Available	509	Open in IMG/M
3300015354\|Ga0182167_1184071	Not Available	767	Open in IMG/M
3300015354\|Ga0182167_1226014	Not Available	680	Open in IMG/M
3300017412\|Ga0182199_1167544	Not Available	545	Open in IMG/M
3300017412\|Ga0182199_1175301	Not Available	535	Open in IMG/M
3300017414\|Ga0182195_1096891	Not Available	699	Open in IMG/M
3300017414\|Ga0182195_1207581	Not Available	517	Open in IMG/M
3300017421\|Ga0182213_1084157	Not Available	878	Open in IMG/M
3300017421\|Ga0182213_1189487	Not Available	584	Open in IMG/M
3300017422\|Ga0182201_1093725	Not Available	586	Open in IMG/M
3300017422\|Ga0182201_1130058	Not Available	522	Open in IMG/M
3300017432\|Ga0182196_1016466	Not Available	1063	Open in IMG/M
3300017432\|Ga0182196_1062601	Not Available	690	Open in IMG/M
3300017432\|Ga0182196_1115063	Not Available	560	Open in IMG/M
3300017440\|Ga0182214_1104619	Not Available	605	Open in IMG/M
3300017447\|Ga0182215_1077259	Not Available	727	Open in IMG/M
3300017447\|Ga0182215_1137378	Not Available	560	Open in IMG/M
3300017447\|Ga0182215_1175782	Not Available	500	Open in IMG/M
3300017693\|Ga0182216_1099962	Not Available	694	Open in IMG/M
3300025711\|Ga0207696_1123883	Not Available	696	Open in IMG/M
3300028050\|Ga0268328_1016188	Not Available	835	Open in IMG/M
3300028054\|Ga0268306_1023204	Not Available	577	Open in IMG/M
3300028055\|Ga0268338_1020549	Not Available	644	Open in IMG/M
3300028058\|Ga0268332_1068200	Not Available	532	Open in IMG/M
3300028061\|Ga0268314_1031555	Not Available	611	Open in IMG/M
3300028063\|Ga0268350_1051161	Not Available	599	Open in IMG/M
3300028063\|Ga0268350_1051358	Not Available	598	Open in IMG/M
3300028064\|Ga0268340_1019335	Not Available	842	Open in IMG/M
3300028064\|Ga0268340_1055496	Not Available	594	Open in IMG/M
3300028142\|Ga0268347_1030209	Not Available	527	Open in IMG/M
3300028144\|Ga0268345_1027411	Not Available	515	Open in IMG/M
3300028152\|Ga0268336_1026557	Not Available	529	Open in IMG/M
3300028153\|Ga0268320_1008135	Not Available	737	Open in IMG/M
3300028466\|Ga0268321_108943	Not Available	543	Open in IMG/M
3300028467\|Ga0268333_1006841	Not Available	625	Open in IMG/M
3300028468\|Ga0268317_1008811	Not Available	567	Open in IMG/M
3300028470\|Ga0268307_1015759	Not Available	580	Open in IMG/M
3300028470\|Ga0268307_1017852	Not Available	558	Open in IMG/M
3300028472\|Ga0268315_1013906	Not Available	624	Open in IMG/M
3300028476\|Ga0268329_1027781	Not Available	513	Open in IMG/M
3300028523\|Ga0268313_1009504	Not Available	629	Open in IMG/M
3300028523\|Ga0268313_1011094	Not Available	602	Open in IMG/M
3300028526\|Ga0268339_1008181	Not Available	658	Open in IMG/M
3300030772\|Ga0061013_12830266	Not Available	552	Open in IMG/M
3300032465\|Ga0214493_1019592	Not Available	1452	Open in IMG/M
3300032502\|Ga0214490_1127422	Not Available	578	Open in IMG/M
3300032591\|Ga0214484_1019878	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1316	Open in IMG/M
3300032689\|Ga0214497_1137924	Not Available	508	Open in IMG/M
3300032697\|Ga0214499_1136943	Not Available	757	Open in IMG/M
3300032697\|Ga0214499_1283805	Not Available	509	Open in IMG/M
3300032934\|Ga0314741_1020093	Not Available	1425	Open in IMG/M
3300032959\|Ga0314738_1027650	Not Available	1013	Open in IMG/M
3300033530\|Ga0314760_1096933	Not Available	729	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	98.28%
Environmental	Environmental	1.72%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	97.41%
Terrestrial	Environmental → Terrestrial	1.72%
Mammals	Host-Associated → Mammals	0.86%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	81.03%
Unclassified	Host-Associated → Plants → Unclassified	7.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.59%
Soil	Environmental → Terrestrial → Soil	1.72%
Digestive System	Host-Associated → Mammals → Digestive System	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	81.03%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	7.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.86%
Loam	Environmental → Terrestrial → Soil → Loam	0.86%
Foregut	Host-Associated → Mammals → Digestive System → Foregut	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	81.03%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	7.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.86%
Unclassified	Host-Associated → Mammals → Digestive System → Foregut → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	61.21%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	19.83%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	7.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Fungi-Associated Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009972	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_224 metaG	Host-Associated	Open in IMG/M
3300009975	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028054	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028055	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028063	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028142	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028144	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028152	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028153	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028466	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028467	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028468	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028470	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028476	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028523	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028526	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300030772	Coassembly of Cow X Switchgrass	Host-Associated	Open in IMG/M
3300032465	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032502	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032591	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032697	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032934	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032959	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033530	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070690_1006819991	3300005330	Switchgrass Rhizosphere	LHIETVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQ
Ga0068859_1013887412	3300005617	Switchgrass Rhizosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQEGK
Ga0068859_1024997082	3300005617	Switchgrass Rhizosphere	LHIDAVNLADGDYELFPADSLATQEVNLNCTNLAQDLGQAPE
Ga0068861_1021585621	3300005719	Switchgrass Rhizosphere	LHIETVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQE
Ga0068863_1024294541	3300005841	Switchgrass Rhizosphere	MVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPE
Ga0068858_1024143672	3300005842	Switchgrass Rhizosphere	LSMNNHNLALHIETVNLADGDYELVPADSRVDQEVILNCANLSQDLGQAP*
Ga0068860_1026267361	3300005843	Switchgrass Rhizosphere	LHIEAVNLADGEYELVPADSRVDQELNLNCASIAQDLGQAPEVFLPDSAQEGK
Ga0068862_1015999491	3300005844	Switchgrass Rhizosphere	LHIETVNLADGDYELVPADSRAEQEINLNCANLSQDLGQAPEAFLPDSAQEGKPR
Ga0105249_130293741	3300009553	Switchgrass Rhizosphere	LHIETVNLADGDYELVPADSRAEQEITLNCTNLSQDLGQAPE
Ga0105137_1106301	3300009972	Switchgrass Associated	LHIETVNLADGDYELVPADSRVDQEVNLNCANLPQDLG
Ga0105129_1174631	3300009975	Switchgrass Associated	LHIETVNLADGDYELVPADSRVDQEVNLNCANLPQDLGQAPEAFLPDSAQ
Ga0105133_1136881	3300009981	Switchgrass Associated	MLQQYHFCMHIEMVNLLDGDYEFVPVDSRVDQEINLNCAN
Ga0105131_1035552	3300009989	Switchgrass Associated	LHIETVNLADGDYDMVPADSRVDQEVSLNCANLSQDLGQAP
Ga0105131_1274221	3300009989	Switchgrass Associated	LHIETVNLADGEYELVPADSRVDQEVNLNCANLSQGLGQAPE
Ga0105120_10523601	3300009992	Switchgrass Associated	LHIETVNLADGDYELVAADSRVDQEVNLNCANLSQD
Ga0105126_10557171	3300009994	Switchgrass Associated	LHIETVNLADGEYELVPVDSCGVQEANLNCTNLAQDLGQAPEVSL
Ga0105139_10525632	3300009995	Switchgrass Associated	LHIETVNLADGDYELVPSDSITAESVDLNCGNLKQGLGQALEDY
Ga0105139_11241861	3300009995	Switchgrass Associated	LHIETVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAP
Ga0134126_118792851	3300010396	Terrestrial Soil	MVNLADGEYKLVHADSRVDQEVILSCTNLAQDLDQA
Ga0157379_123902201	3300014968	Switchgrass Rhizosphere	LHIEAINLADGDYELVPADSRAEQEVNLNYANLSQDLGQAP
Ga0182101_10157151	3300015284	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCTNLSQDLGQAPEAFLPDSA
Ga0182101_10483631	3300015284	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCTNLSQDLGQAPEAFL
Ga0182105_10301811	3300015290	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCTNLSQDLGQAPEAFLPDSAQEGKPR
Ga0182103_10509471	3300015293	Switchgrass Phyllosphere	LHIETVNLADGDYEFVPSDSITAESVDLNCANLKQDLG
Ga0182098_10489272	3300015309	Switchgrass Phyllosphere	MVNLADGEYELVPADSHFDQEVNLNCANLSQDLGQDPEVFLPDSAQE
Ga0182098_10489301	3300015309	Switchgrass Phyllosphere	LHIEAVNLADGEYELVPADSRVDQEVNLNCANLSQGLGQAPDVFLPDS
Ga0182098_10867661	3300015309	Switchgrass Phyllosphere	LHIEAVNLADGDYELVPADSRVDQEVDLNCANLSQDLGQTPEAL
Ga0182162_10780792	3300015310	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQAPEAFLPDSAQ
Ga0182162_11277671	3300015310	Switchgrass Phyllosphere	LRIETVNLADGDYELVPADSRMDQEVNLNCAILSQDLGQAPETFLPDS
Ga0182182_10849051	3300015311	Switchgrass Phyllosphere	LADGDYELVPADSRVDQEVNLNCANSSQDLGQAP*
Ga0182182_10892991	3300015311	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVDQDINLNCANLSQDLGQAPEAFLPD
Ga0182164_10864421	3300015313	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRAEQEVNLNCANLSQDLGQAPEAFLPDS
Ga0182120_10424961	3300015315	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVEQEVNLNCANLSQDLGQAPEAFLADS
Ga0182130_10886231	3300015319	Switchgrass Phyllosphere	IDAVNLADGDYELVPADSLATQEVNLNCTNLAQDLGQAPKDT*
Ga0182165_10659412	3300015320	Switchgrass Phyllosphere	LHIETVNLADGEYELVPADSRVEKEVNLNYTNLAQDLGQAPEASLPDSAQEGKL*
Ga0182134_11406491	3300015324	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSCVDQEVNLNCTNLSKDLGQAPEVCLL
Ga0182148_10406122	3300015325	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRAEREVNLNCANLPQDLGQAPEAFLPDSAQ
Ga0182148_10557312	3300015325	Switchgrass Phyllosphere	LHIETVNLADGDSELVPADSHVDQEINLNCANLSQDLGQAPEAFLPDSAQEGK
Ga0182148_11344131	3300015325	Switchgrass Phyllosphere	LHIETVNLADGNYELVPADSRVDQEVNLNCANLSQDLGQ
Ga0182114_11430331	3300015327	Switchgrass Phyllosphere	LHLETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQALEAFLP
Ga0182152_10948711	3300015330	Switchgrass Phyllosphere	LHIEAINLADGDYELVPTDSRAEQEVNLNCANLSQDLGQAPEAFLPDSAQE
Ga0182132_11214811	3300015334	Switchgrass Phyllosphere	IFALHIESVNLANGDYELVPSDSLTAMDVNLNYANLKQDLGQAL*
Ga0182116_10503692	3300015335	Switchgrass Phyllosphere	LHIETVNLADGEYELVPADSCVVQEANLNFTNLAQDPGQAPEVSLPDSAQEG
Ga0182116_10765501	3300015335	Switchgrass Phyllosphere	LHIETVNLADGEYELVPAGSLAQEVNLNCTNLAQDLGQAPEVSLPDSAQE
Ga0182150_10696961	3300015336	Switchgrass Phyllosphere	MVNLADGEYELVTADSRVDQEANLNFTNLVQDLGQAPEVSLPDSA
Ga0182150_10851772	3300015336	Switchgrass Phyllosphere	LHIETVNLADGEYELMPADSCVVQEANLNCTNLAQDLGQAPEVSLPDSAQEGK
Ga0182151_11518731	3300015337	Switchgrass Phyllosphere	LHIETVNLADGEYELVPADSRVDQEVNLNCTNLTQDLGQAPEVSLPES
Ga0182151_11599171	3300015337	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQAPEAFLPDSA
Ga0182149_10867441	3300015339	Switchgrass Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSA
Ga0182149_11027181	3300015339	Switchgrass Phyllosphere	LHIETVNLADGDYELVPTDSRVDHEVSLNCANLSQNLGQAPEAFLPD
Ga0182149_11425041	3300015339	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRMDQEVNLNCANLSQDLGQAPEAFLPDSAQEG
Ga0182115_12797751	3300015348	Switchgrass Phyllosphere	MHIEAVNLADGDYELVPADSCVTLEVNLNCTNLAQGLGQAPEVPLPDSAQEG
Ga0182185_11147232	3300015349	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQ
Ga0182185_11811651	3300015349	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSCVDQEVNLNCANLSQDLGQAPEAFLPDSAQEGKPR
Ga0182163_11799251	3300015350	Switchgrass Phyllosphere	MVNLADGDYELVPADSLTQEINLNCTNVAQDLGQAPEASLHDSTQE
Ga0182169_10780461	3300015352	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVEQEVNLNCANLSQDLGQAPEA
Ga0182169_12291231	3300015352	Switchgrass Phyllosphere	LHIEAVNLADGEYELVPADSHVDQEVNLNCASVAQDLGQVPEV
Ga0182169_12771011	3300015352	Switchgrass Phyllosphere	EMVNLADGDYELVPSDAITAESVDLNCANLKQDLGQAL*
Ga0182169_13154631	3300015352	Switchgrass Phyllosphere	MVNLADGDYELVPADSRVDQEVNLNCTNLSQDLGQAPEAF
Ga0182179_11251232	3300015353	Switchgrass Phyllosphere	MINLADGEYELVPADSRIDQEVNLNCANLSQDLSQAPEVFLPDSA
Ga0182179_11988601	3300015353	Switchgrass Phyllosphere	LHIETINLADGDYELVPADSRADQEVNLNCANLSQGLGQAPEVFLPNSAQEG
Ga0182179_11989411	3300015353	Switchgrass Phyllosphere	LHIEAVNLADGDYELMHADSRVDQEANLNCANLSQDLGQAPEVFLPDSAQEGKP
Ga0182179_13161181	3300015353	Switchgrass Phyllosphere	LHIEAVNLADGDYELVHADSRVDQEVNLNCANLSQDLGQAPEAFLPD
Ga0182167_11840711	3300015354	Switchgrass Phyllosphere	LHIETVNLADGEYELVPADSCVVQEANLNCTNLAQDLGQAPE
Ga0182167_12260141	3300015354	Switchgrass Phyllosphere	LHIEAVNLADGDYELEPADSRVDQEVNLNCANLSQDLGQAPEAFLPDSAQEGK
Ga0182199_11675441	3300017412	Switchgrass Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQEGKPR
Ga0182199_11753011	3300017412	Switchgrass Phyllosphere	LHIETVNLADGEYELVPAGSLAEEVNLNCTNLAQDL
Ga0182195_10968911	3300017414	Switchgrass Phyllosphere	MHIETANLANGEYELVSADSRVDPEVNLNCANLSQGLGQAPEVFLPDSAQEG
Ga0182195_12075811	3300017414	Switchgrass Phyllosphere	MTHNLALHIETVNLADGDYELVPADSRAEQEINLNCANLSQ
Ga0182213_10841571	3300017421	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRAEQEINLNCTNLSQDLGQAPEAFLPDSAQE
Ga0182213_11894871	3300017421	Switchgrass Phyllosphere	LHIETVNLVDGDYELVPADSRIDEEVNLNCANSSQGLGQAPEVFLPDSA
Ga0182201_10937251	3300017422	Switchgrass Phyllosphere	LHLETANLADGDYELVSADSRVEQEVNLNCANSSQDLGQAPEAFLPDSAQEG
Ga0182201_11300581	3300017422	Switchgrass Phyllosphere	MVNLADGEYELVPADSRFNQEVNLNYANLSQGLGQAPEVYLPDSA
Ga0182196_10164661	3300017432	Switchgrass Phyllosphere	MVNLADDEYELVPVDSLAQEVNLNFTNFAQDLGQAPEA
Ga0182196_10626012	3300017432	Switchgrass Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQEGKPRSI
Ga0182196_11150631	3300017432	Switchgrass Phyllosphere	LHIETVNVADGDYELVPADSRVDQEANLNCANLSQGLGQAP
Ga0182200_10631541	3300017439	Switchgrass Phyllosphere	LHIKTINLADGDYELVPSDSIPAESANLNCANLNQDL
Ga0182214_11046191	3300017440	Switchgrass Phyllosphere	LHKEAINLADGDYELVPADSRAEQEVNLNCVNLSQDLGQAPEAFLPDSA
Ga0182215_10772592	3300017447	Switchgrass Phyllosphere	LHIERVNLADGDYELVPADSCVDQEVYLNCANLSQDLGQAPEAFLPDNAQEGKPRS
Ga0182215_11373781	3300017447	Switchgrass Phyllosphere	LHIETVNLADGEYELVPADSRVDQEGNLNCTSLSQDLGQAPEVVLTDS
Ga0182215_11757821	3300017447	Switchgrass Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAQEAFLPDS
Ga0182216_10999621	3300017693	Switchgrass Phyllosphere	LHIETVNLADGEYELVPADSHIDQEANLNCTNLAQDLGQAPEVFLPDSAQE
Ga0207696_11238831	3300025711	Switchgrass Rhizosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQGL
Ga0268328_10161881	3300028050	Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQAPEAFLPD
Ga0268306_10232041	3300028054	Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQAPEAFLP
Ga0268338_10205491	3300028055	Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQEG
Ga0268332_10682002	3300028058	Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQAPEAFLPDSAQE
Ga0268314_10315552	3300028061	Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQALEAFLP
Ga0268350_10511611	3300028063	Phyllosphere	LHIETVNLADGDYELVPADSHAEQEINLNCTNLSQDLGQAPEAFLPDSAQEGKPR
Ga0268350_10513582	3300028063	Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDS
Ga0268340_10193351	3300028064	Phyllosphere	MALHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQEGV
Ga0268340_10554961	3300028064	Phyllosphere	VVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQEGKPRSII
Ga0268347_10302091	3300028142	Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVSLNCANLSQDLGQAPE
Ga0268345_10274111	3300028144	Phyllosphere	LHIETVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQEGKPRSII
Ga0268336_10265571	3300028152	Phyllosphere	MINLADGDYELVPADSRVDQEVNLNCANLSQDMGQAPEAFLPDSAQEGK
Ga0268320_10081351	3300028153	Phyllosphere	LHSHIESVNLADGEYELVPADSRIDQEVNLNCANVAQDLG
Ga0268321_1089431	3300028466	Phyllosphere	LHIETVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQ
Ga0268333_10068411	3300028467	Phyllosphere	LHIETVNLADGDYELVPADSRAEQEINLNCTNLSQDLGQAPEAFLPDSA
Ga0268317_10088111	3300028468	Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFMPDSAQEGKPR
Ga0268307_10157592	3300028470	Phyllosphere	LHIETVNLADGDYELVPADSRAEQEVTLNCTNLSQDLGQAPEA
Ga0268307_10178521	3300028470	Phyllosphere	LHIETVNLADGDYELVPADSRMDQEVNLNCANLSQDLGQAPEAFLPDSA
Ga0268315_10139062	3300028472	Phyllosphere	LHIEAINLADGDYELVPTDSRAEQEVNLNCANLSQDLGQAPEAFLPDSAQEGNPRSI
Ga0268329_10277811	3300028476	Phyllosphere	LHIETVNLADGDYELVPAYSRAEQEVNLNCTNLSQDLGQA
Ga0268313_10095041	3300028523	Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPNSAQEGKP
Ga0268313_10110942	3300028523	Phyllosphere	LHIETVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLSDSAQEGK
Ga0268339_10081811	3300028526	Phyllosphere	LHIEAVNLADGDYELVPADSRAEQEVNLNCTNLSQDLGQAPEAFLPDSAQEGV
Ga0061013_128302661	3300030772	Fungi-Associated Bovine Rumen	LHIETVNLADGEYELVPADSRVDQEVNLNCANLSQGLGQ
Ga0214493_10195921	3300032465	Switchgrass Phyllosphere	LHIETVNLADGEYKLVPADSRVDQEVDLNCANFSQDLGQAP
Ga0214490_11274221	3300032502	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRAEQEVNLNCANLSQDLGQAPEALLPDSA
Ga0214484_10198782	3300032591	Switchgrass Phyllosphere	MLYETVNLADGDYELVPADSRVDQEVNLNCANLSQGLGQAPEVYLLDSA
Ga0214497_11379241	3300032689	Switchgrass Phyllosphere	LHIEAVNLADGDYKLVPADSRVDQEVNLNCANLPLDLGQAPEAFLPNSAQEGKPRSII
Ga0214499_11369431	3300032697	Switchgrass Phyllosphere	LHIETVNLADGDYDLVPADSRVDQEVNLNCTNLSQDLGQAPEAFLPDSAQEGKP
Ga0214499_12838051	3300032697	Switchgrass Phyllosphere	MVNLADGDYELVPADSRAEQEVNLNCANLSQDLGQAPEAFLPDSAQEGK
Ga0314741_10200931	3300032934	Switchgrass Phyllosphere	LHIETVNLADGEYELVPADSRFDQEVNLSCANLSQGLGQAPEVFLPDSAQKGKPR
Ga0314738_10276501	3300032959	Switchgrass Phyllosphere	LHIETVNLADGDYELVPADSRVDQEVNLNCANLSQDLGQAPEAFL
Ga0314760_10969331	3300033530	Switchgrass Phyllosphere	LHIETVNVADGDYELVSADSRVDQEVNLNCANLSQDLGQAPEAFLPDSAQEGKPRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078110

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences