Metagenome Family F078104

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078104
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	44 residues
Representative Sequence	MSAEGRERIRQAQIKRWAALKGASKANMNATVAPRPKAKKKTAKAA
Number of Associated Samples	90
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.86 %
% of genes near scaffold ends (potentially truncated)	71.55 %
% of genes from short scaffolds (< 2000 bps)	81.90 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.793 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (28.448 % of family members)
Environment Ontology (ENVO)	Unclassified (50.862 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.793 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.19% β-sheet: 0.00% Coil/Unstructured: 60.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF07804	HipA_C	8.62
PF07805	Obsolete Pfam Family	6.90
PF12833	HTH_18	6.03
PF01381	HTH_3	3.45
PF07021	MetW	3.45
PF16884	ADH_N_2	2.59
PF13657	Couple_hipA	2.59
PF02178	AT_hook	2.59
PF06445	GyrI-like	1.72
PF13365	Trypsin_2	1.72
PF04098	Rad52_Rad22	1.72
PF07603	DUF1566	1.72
PF08808	RES	0.86
PF14087	DUF4267	0.86
PF00291	PALP	0.86
PF07883	Cupin_2	0.86
PF14082	DUF4263	0.86
PF00069	Pkinase	0.86
PF01613	Flavin_Reduct	0.86
PF00004	AAA	0.86
PF04964	Flp_Fap	0.86
PF12640	UPF0489	0.86
PF13620	CarboxypepD_reg	0.86
PF00107	ADH_zinc_N	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3550	Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module	Signal transduction mechanisms [T]	8.62
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.45
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.86
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.86
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.79 %
Unclassified	root	N/A	36.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.79 %
Unclassified	root	N/A	36.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.79 %
Unclassified	root	N/A	36.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.21 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.28 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.21 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.21 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.21 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	7.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.86 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.86 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.86 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.21 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	7.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.86 %
Edaphobacter flagellatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter flagellatus	0.86 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.86 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.86 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.21 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	7.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %
Granulicella sp. WH15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	0.86 %
Edaphobacter flagellatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter flagellatus	0.86 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.86 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.86 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009623\|Ga0116133_1029012	All Organisms → cellular organisms → Bacteria → Acidobacteria	1367	Open in IMG/M
3300009634\|Ga0116124_1066483	Not Available	1043	Open in IMG/M
3300009645\|Ga0116106_1132609	Not Available	800	Open in IMG/M
3300014151\|Ga0181539_1215860	Not Available	730	Open in IMG/M
3300014158\|Ga0181521_10422730	Not Available	652	Open in IMG/M
3300014160\|Ga0181517_10440907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	664	Open in IMG/M
3300014161\|Ga0181529_10035778	All Organisms → cellular organisms → Bacteria	3716	Open in IMG/M
3300014161\|Ga0181529_10038365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3538	Open in IMG/M
3300014167\|Ga0181528_10533180	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300014168\|Ga0181534_10014172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4129	Open in IMG/M
3300014169\|Ga0181531_10290960	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300014169\|Ga0181531_10371275	Not Available	878	Open in IMG/M
3300014199\|Ga0181535_10214895	Not Available	1174	Open in IMG/M
3300014200\|Ga0181526_10135714	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300014489\|Ga0182018_10188162	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300014491\|Ga0182014_10023195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5129	Open in IMG/M
3300014491\|Ga0182014_10069668	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2271	Open in IMG/M
3300014491\|Ga0182014_10447627	Not Available	638	Open in IMG/M
3300014491\|Ga0182014_10582602	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300014492\|Ga0182013_10127897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1647	Open in IMG/M
3300014493\|Ga0182016_10067383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2675	Open in IMG/M
3300014496\|Ga0182011_10310544	Not Available	1045	Open in IMG/M
3300014499\|Ga0182012_10310525	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300014499\|Ga0182012_10480072	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300014655\|Ga0181516_10149965	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300014657\|Ga0181522_10047975	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	2397	Open in IMG/M
3300014657\|Ga0181522_10799000	Not Available	579	Open in IMG/M
3300014658\|Ga0181519_10948835	Not Available	534	Open in IMG/M
3300014838\|Ga0182030_10087427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	4433	Open in IMG/M
3300014838\|Ga0182030_10529401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1164	Open in IMG/M
3300014838\|Ga0182030_10663193	Not Available	988	Open in IMG/M
3300014838\|Ga0182030_10902741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	791	Open in IMG/M
3300014839\|Ga0182027_12001928	Not Available	555	Open in IMG/M
3300017925\|Ga0187856_1123622	Not Available	1001	Open in IMG/M
3300017935\|Ga0187848_10294310	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300017940\|Ga0187853_10258054	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300017941\|Ga0187850_10140636	Not Available	1138	Open in IMG/M
3300017948\|Ga0187847_10124985	Not Available	1410	Open in IMG/M
3300017988\|Ga0181520_10052901	All Organisms → cellular organisms → Bacteria	3840	Open in IMG/M
3300017988\|Ga0181520_10060547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3498	Open in IMG/M
3300017988\|Ga0181520_10327046	Not Available	1137	Open in IMG/M
3300017988\|Ga0181520_10464585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	903	Open in IMG/M
3300017988\|Ga0181520_10600209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	764	Open in IMG/M
3300017996\|Ga0187891_1152012	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300018002\|Ga0187868_1288045	Not Available	545	Open in IMG/M
3300018003\|Ga0187876_1218420	Not Available	633	Open in IMG/M
3300018009\|Ga0187884_10069764	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300018017\|Ga0187872_10013153	All Organisms → cellular organisms → Bacteria → Acidobacteria	5046	Open in IMG/M
3300018019\|Ga0187874_10341122	Not Available	607	Open in IMG/M
3300018033\|Ga0187867_10068656	All Organisms → cellular organisms → Bacteria → Acidobacteria	2097	Open in IMG/M
3300018038\|Ga0187855_10087455	All Organisms → cellular organisms → Bacteria → Acidobacteria	1892	Open in IMG/M
3300018043\|Ga0187887_10515827	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300018044\|Ga0187890_10634280	Not Available	602	Open in IMG/M
3300018047\|Ga0187859_10405498	Not Available	749	Open in IMG/M
3300019082\|Ga0187852_1223032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter flagellatus	770	Open in IMG/M
3300022849\|Ga0224531_1034707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	895	Open in IMG/M
3300022861\|Ga0224528_1053470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	648	Open in IMG/M
3300022872\|Ga0224526_1028646	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300022872\|Ga0224526_1060106	Not Available	728	Open in IMG/M
3300022877\|Ga0224527_1018107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1742	Open in IMG/M
3300022877\|Ga0224527_1064514	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300023101\|Ga0224557_1202017	Not Available	690	Open in IMG/M
3300023101\|Ga0224557_1301514	Not Available	509	Open in IMG/M
3300023228\|Ga0224530_1008063	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
3300025404\|Ga0208936_1024088	Not Available	792	Open in IMG/M
3300025501\|Ga0208563_1108191	Not Available	531	Open in IMG/M
3300028084\|Ga0255356_1054379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300028090\|Ga0255349_1070802	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300028268\|Ga0255348_1027186	Not Available	1118	Open in IMG/M
3300028552\|Ga0302149_1187966	Not Available	540	Open in IMG/M
3300028552\|Ga0302149_1203798	Not Available	518	Open in IMG/M
3300028562\|Ga0302151_10036609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1784	Open in IMG/M
3300028566\|Ga0302147_10163489	Not Available	753	Open in IMG/M
3300028762\|Ga0302202_10060211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2382	Open in IMG/M
3300028765\|Ga0302198_10009187	All Organisms → cellular organisms → Bacteria → Acidobacteria	8332	Open in IMG/M
3300028766\|Ga0302269_1005047	All Organisms → cellular organisms → Bacteria	5176	Open in IMG/M
3300028779\|Ga0302266_10285736	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300028785\|Ga0302201_10407897	Not Available	526	Open in IMG/M
3300028854\|Ga0302268_1081165	Not Available	812	Open in IMG/M
3300028854\|Ga0302268_1156394	Not Available	550	Open in IMG/M
3300028873\|Ga0302197_10367935	Not Available	639	Open in IMG/M
3300028909\|Ga0302200_10199589	Not Available	1003	Open in IMG/M
3300029907\|Ga0311329_10843527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	580	Open in IMG/M
3300029911\|Ga0311361_10483871	All Organisms → cellular organisms → Bacteria → Proteobacteria	1244	Open in IMG/M
3300029914\|Ga0311359_11068712	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300029916\|Ga0302148_1111695	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300029951\|Ga0311371_10887470	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300029953\|Ga0311343_10285232	Not Available	1616	Open in IMG/M
3300029953\|Ga0311343_10438205	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300029956\|Ga0302150_10047684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1676	Open in IMG/M
3300029985\|Ga0302280_1044477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1907	Open in IMG/M
3300029986\|Ga0302188_10336354	Not Available	621	Open in IMG/M
3300029988\|Ga0302190_10226594	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300029999\|Ga0311339_10369704	Not Available	1508	Open in IMG/M
3300029999\|Ga0311339_10520799	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300030020\|Ga0311344_10445242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	1170	Open in IMG/M
3300030020\|Ga0311344_10690298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	854	Open in IMG/M
3300030051\|Ga0302195_10028249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3465	Open in IMG/M
3300030399\|Ga0311353_11436553	Not Available	561	Open in IMG/M
3300030507\|Ga0302192_10347520	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300030688\|Ga0311345_10101874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	3270	Open in IMG/M
3300031027\|Ga0302308_10261407	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300031234\|Ga0302325_10486878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1871	Open in IMG/M
3300031258\|Ga0302318_10118444	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300031258\|Ga0302318_10470636	Not Available	636	Open in IMG/M
3300031259\|Ga0302187_10091906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1751	Open in IMG/M
3300031259\|Ga0302187_10568269	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031524\|Ga0302320_10189788	All Organisms → cellular organisms → Bacteria → Acidobacteria	2974	Open in IMG/M
3300031708\|Ga0310686_102855787	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300031788\|Ga0302319_11752670	Not Available	539	Open in IMG/M
3300031902\|Ga0302322_101864640	Not Available	737	Open in IMG/M
3300033402\|Ga0326728_10103621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3411	Open in IMG/M
3300033402\|Ga0326728_10978063	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300033822\|Ga0334828_101564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	708	Open in IMG/M
3300033824\|Ga0334840_009002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3755	Open in IMG/M
3300033824\|Ga0334840_171195	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.79%
Aquatic	Environmental → Aquatic	36.21%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	50.00%
Freshwater	Environmental → Aquatic → Freshwater	36.21%
Soil	Environmental → Terrestrial → Soil	13.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	50.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	36.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	50.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	31.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	28.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	17.24%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.66%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	12.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	10.34%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.31%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300022861	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300022877	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T0	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023228	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T75	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300028084	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T100	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116133_10290122	3300009623	Peatland	QIKRWAAQKGATKANMNVTVAPLPKTKKKAAEAA*
Ga0116124_10664831	3300009634	Peatland	EARERVRQAQIKRWAAKKGTSKANMNATVAPLPKAKKKAAKAV*
Ga0116106_11326092	3300009645	Peatland	QAQIKRWAALKTPKENLNASVAPLPKAKKKAAKAA*
Ga0181539_12158601	3300014151	Bog	RIRQAQIKPWAALKGASKANLNATVAPLPKAKKKAAKAV*
Ga0181521_104227303	3300014158	Bog	MSAEGRERIRQAQVKRWATLKSASKANMNETVAQLPKAKKKTA
Ga0181517_104409072	3300014160	Bog	GKMSAEGRERVRQAQIKRWAKLKGTSKANMNATVAPLPNAKKKAARAA*
Ga0181529_100357783	3300014161	Bog	MSAEGRERVQQAQIKRWAALKGASKANLNATVAPLPKAKKKAAKAA*
Ga0181529_100383651	3300014161	Bog	EARERIRQAQIKRWAALKSASKANLNATVAPLPKAKKKAAKAA*
Ga0181528_105331801	3300014167	Bog	QAQIKRWAALKDASKANLNATVSPLPKAKKKAAKTA*
Ga0181534_100141725	3300014168	Bog	MSAEAGERIRRAQIKRLGALKGASKANMNATVAPLPKAKKKAAKAA*
Ga0181531_102909602	3300014169	Bog	MSAEGRERIRQAQIKRWATLKSASKANMNETVAQLPRAKKQAAKAA*
Ga0181531_103712752	3300014169	Bog	ERIRQAQIKRWAALNTPKANLNATVAPLPKAKKKAAKAA*
Ga0181535_102148953	3300014199	Bog	AQIKRWAALNASKANMNTTVAQLPKAKKKPAKAA*
Ga0181526_101357142	3300014200	Bog	MSVEARERIRQAQIKRWAALKTPKENLNASVAPLPKAKKKAAKAA*
Ga0182018_101881622	3300014489	Palsa	MSAEGRERIRQAQIKRWAASKSASKANMNETFGQLPKANKKTAKAA*
Ga0182014_100231954	3300014491	Bog	MSAEGRESVRQAQIKRWAALKGASKANINATVASLPKAKKKAANAA*
Ga0182014_100696681	3300014491	Bog	IRQEQIECWAALNASKANMNATVAPLPKVKRKADKAA*
Ga0182014_104476271	3300014491	Bog	MSTEGRERIRDAQIKRWAALKGASKANMNATVAPQPKVKKKTAMAA*
Ga0182014_105826021	3300014491	Bog	AQIKRWATLKSASKANMNETVAQLPKVKKKAAKAA*
Ga0182013_101278972	3300014492	Bog	MSAEGRERIRQAQIKRWAALKGVSKANMNATVAPLQKAKKKTAKAV*
Ga0182016_100673834	3300014493	Bog	MSAEGRERVRQAQIKRWAALKGTSKANLNTTVAPQSKPKKKVAKT
Ga0182011_103105442	3300014496	Fen	ERIRQAQIKRWAALNATKANMNATVAPLPKAKKKAAKAA*
Ga0182012_103105252	3300014499	Bog	AEARERIRQEQIERWAALNASKANMNATVAPLPKVKRKADKAA*
Ga0182012_104800722	3300014499	Bog	MSAEGRERIRHAQIKRWATLKSASKANMNETVAQLPKAKKKAAKAA*
Ga0181516_101499652	3300014655	Bog	KRREMSAEARERIRQAQIKRWAALNASKANMNATVAPLPNAKEKAAKAA*
Ga0181522_100479755	3300014657	Bog	MSAEGRERVRQAQIKRWAKLKGASKAKLNATVAPPPKAKKKAAKAV*
Ga0181522_107990001	3300014657	Bog	GKMSAEGRERVRQAQIKRWAKLKGASKTNFNATVAPLPKVKKKAAKAA*
Ga0181519_109488352	3300014658	Bog	AEARERIRQAQVKRWAAQKGTSEANMNATVAPLPKAKKKATKAA*
Ga0182030_100874271	3300014838	Bog	EGRERVRQAQIKRWAALKGVSKANLNATVAPQLKAKKKAAKAA*
Ga0182030_105294013	3300014838	Bog	GRERIRQAQIKRWAAQKGTPKANMNATVAPLPKAKKKATKAA*
Ga0182030_106631931	3300014838	Bog	MSAEARERIREAQIKRWAALKGASKANMNATVAPRPKAKKKTAKAA*
Ga0182030_109027412	3300014838	Bog	EGRERVRQAQIKRWAALKGVSKANLNATVAPQLKAKKKAAKSA*
Ga0182027_120019281	3300014839	Fen	IVVPVAQKAKKRKKMSAEGRERVRQAQIKRWAAVKQAAKTTAAPLSKLK*
Ga0187856_11236221	3300017925	Peatland	VQKTRKRRKMSAETRERIRQAQIKRWAALNTPKANLNATVAPLPKAKKKAAKAA
Ga0187848_102943102	3300017935	Peatland	MSAEARERIRQVQIKRWAVQKGVLKTNMNATVAPMPKAKKKAA
Ga0187853_102580541	3300017940	Peatland	RRKMSAEARERIRQVQIKRWAVQKGVLKTNMNATVAPMPKAKKKAARAA
Ga0187850_101406362	3300017941	Peatland	KRRKMSAEGRERVRQAQIKRWAALKAYMNATVAPRPKAKKKAARAA
Ga0187847_101249852	3300017948	Peatland	VRQAQIKRWAKLKGASKANLNATIAPLPKAKKKAAKAA
Ga0181520_100529012	3300017988	Bog	MSAEGRERVQQAQIKRWAALKGASKANLNATVAPLPKAKKKAAKAA
Ga0181520_100605474	3300017988	Bog	MSAEGRERVRQAQFKRWAALKGLSKANMNATVAPLPKAMKKAAKTA
Ga0181520_103270462	3300017988	Bog	AEARERIRQAQIKRWAVQNGTSKVNMNATVAPPPKAKKRAAKAV
Ga0181520_104645851	3300017988	Bog	KARKRRKMSAEGRERVRQAQVKRWAALKGASKANLNATVAPLPKAKKRAAKAV
Ga0181520_106002092	3300017988	Bog	KMSAEARERIRQAQIKRWAALNASKANMNTTVAPLPKAKKKPAKGA
Ga0187891_11520121	3300017996	Peatland	RGKMSAEGRERVRQAQIKRWAALKSASKVNLNATVSPLPKAKKKAAKTA
Ga0187868_12880451	3300018002	Peatland	KARKRRKMSAEGRERIRQAQIKRWAAQKSASKANMNATVAPMPKAKKMVAKAA
Ga0187876_12184201	3300018003	Peatland	ERIRQAQIKRWAALKSASKANMNETVGQLPKAKKKAAKAA
Ga0187884_100697641	3300018009	Peatland	RRKMSAEARERIRQAQIKRWAALKTPKENLNARVAPLPKAKKKAAKAA
Ga0187872_100131531	3300018017	Peatland	IRQAQIKRWAAQKSASKANMNATVAPMPKAKKMVAKAA
Ga0187874_103411222	3300018019	Peatland	MMSAEARERIRQAQIKRWAAQNATKANMNATVAPLPKAKKKAAKAA
Ga0187867_100686563	3300018033	Peatland	SAEGRERIRQAQIKRWAAQKSASKANMNATVAPMPKAKKMVAKAA
Ga0187855_100874551	3300018038	Peatland	RQAQIKRWAALKTPKENLNASVAPLPKAKKKAAKAA
Ga0187887_105158272	3300018043	Peatland	ARKRRRISAEGRERVRQAQIKRWAALKSASKANMNATVAPLPKVKKKAAKAA
Ga0187890_106342801	3300018044	Peatland	QAQIKRWAAQKGATKANMNVTVAPLPKTKKKAAEAA
Ga0187859_104054982	3300018047	Peatland	MSAEGRERIRQAQIKRWAALKGASKANMNATVAPRPKAKKKTAKAA
Ga0187852_12230321	3300019082	Peatland	QAQIKRWAALKSASKANMNETVGQLPKAKKKAAKAA
Ga0224531_10347071	3300022849	Soil	QKAKKRKKMNAEGRERVRQAQIKRWAVLKGVSKANLNATVAPLPRSKRKAAKSA
Ga0224528_10534701	3300022861	Soil	SAEGRERKRWAALKGVSKANLNATVAPLLKAKKKAAKAA
Ga0224526_10286463	3300022872	Soil	RKMSVEARERIRQAQIKRWAALKTPKENLNASVAPLPKAKKKAAKAA
Ga0224526_10601061	3300022872	Soil	GRERVRQAQIKRWAELKGASKANMNATVAPLPKAKKKAANAA
Ga0224527_10181073	3300022877	Soil	EGRERVRQAQIKRWAALKGVSKANLNATVAPLPKPKKKTAKAA
Ga0224527_10645142	3300022877	Soil	ARKRGKLSAEARERIRQAQIKRWAAVKGASKTNMNAPVASLPKAKKKAAKSA
Ga0224557_12020171	3300023101	Soil	AEARERIRQAQIKPWAALKGASKANLNATVAPLPKAKKKAAKAV
Ga0224557_13015142	3300023101	Soil	MSAEARERIREAQIKRWAALKGASKANMNATVAPRPKAKKKTAKAA
Ga0224530_10080634	3300023228	Soil	MSAEGRERVRQAQIKRWAELKGASKANMNATVAPLPKAKKKAANAA
Ga0208936_10240881	3300025404	Peatland	MSAEAGERIRRAQIKRLGALKGASKANMNATVAPLPKAKKKAAKAA
Ga0208563_11081911	3300025501	Peatland	RKMSAEGRERIRQAQIKRWAAQKSASKANMNATVAPMPKAKKMVAKAA
Ga0255356_10543791	3300028084	Soil	SAEGRERIRQAQIKRWAALKGVSKANMNATVAPLQKAKKKTAKAV
Ga0255349_10708022	3300028090	Soil	VQKTKKRGKMSAEGRERVRQAQIKRWAALKGASKANLNATVAPLPKAKK
Ga0255348_10271862	3300028268	Soil	MSAEGRERIRQAQIKRRAALKGASKANSNATVAPLPKAKKRVAKAA
Ga0302149_11879661	3300028552	Bog	RQRRKMSAEGRERIRQAQIKRWAALKGASKAKVIATVAPRPKAKKKTAKAA
Ga0302149_12037981	3300028552	Bog	MRRKMSAEGRERIRQAQIKRWAALNAPKSNLNARVAPLPKGKK
Ga0302151_100366091	3300028562	Bog	KMSAEGRVRIRQAQIKRRAALRSASKANMNETVGQLPKAMK
Ga0302147_101634891	3300028566	Bog	KHRKMSAEGRERIRQAQIKRWAALNASKANMNATVAPRPKVKKKTAKAA
Ga0302202_100602114	3300028762	Bog	AEGRERIRQAQIKRWAALKGVSKANMNATVAPLQKAKKKTAKAV
Ga0302198_1000918711	3300028765	Bog	MSAEGRERIRQAQIKRWAALKGVSKANMNATVAPLQKAKKKTAKAV
Ga0302269_10050478	3300028766	Bog	MSAEGRERIRQAPIKRWAALKGVSKANMNATVAPLQKAKKKTAKAV
Ga0302266_102857361	3300028779	Bog	AEGRERIRHAQIKRWATLKSASKANMNETVAQLPKAKKKAAKAA
Ga0302201_104078972	3300028785	Bog	MRAEGRERIRQAQIKRWAALNGASKANRNETVAQLPRGKKKAAKAA
Ga0302268_10811651	3300028854	Bog	KTRKRREMSAEARERIRQAQIKRWAALNASKANMNATVAPLPNAKEKAAKAA
Ga0302268_11563941	3300028854	Bog	MSAEGRERIRQAQIKRRAALKGASKANSNATVAPLPKA
Ga0302197_103679351	3300028873	Bog	MSTEGRERIRDAQIKRWAALKGASKANMNATVAPQPKVKKKTAMAA
Ga0302200_101995891	3300028909	Bog	MSAEGRERVRQAQIKRWAALKGASKANLNTMVAPLP
Ga0311329_108435271	3300029907	Bog	KKMSAEGRERVRQAQIKRWAALKGVSKANLNATVAPQLKAKKKAAKSA
Ga0311361_104838711	3300029911	Bog	LYGPNIPKNRKRGKMSAEGRERVRQAQIKRWAELKGTSKANLNTMVAP
Ga0311359_110687121	3300029914	Bog	QAQIKRWAALKSASKVNLNATVSPLPKAKKMAAKTA
Ga0302148_11116951	3300029916	Bog	TRKRQKMSAEAREHIRQEQIECWAALNASKANMNATVAPLPKVKRKADKAA
Ga0311371_108874701	3300029951	Palsa	RRPANGAERIRQPQIKRWAALNAFKANMNATVAPLPQAKKKAAKAA
Ga0311343_102852322	3300029953	Bog	MSAEGRERIRQAQIKRWAALKGASKAKVIATVAPRPKAKKKTAKAA
Ga0311343_104382051	3300029953	Bog	RVRQAQIKRWAVLKGVSKANMNATVAPLPKGKKKAAKAA
Ga0302150_100476841	3300029956	Bog	MRKKMSAEGRERVRQAQIKRWAAVKGASKANMNVTIASLPKARKKAA
Ga0302280_10444773	3300029985	Fen	GKMSAEGRERVRQAQIKRWAALKSASKVNLNATVSPLPKAKKKAAKTA
Ga0302188_103363541	3300029986	Bog	IREAQIKRWAALNTSKANMNTTVAPQPKVKKKTAKAA
Ga0302190_102265942	3300029988	Bog	KARKRGKLSAQARERILQAQIKRWAAVKGASKTNMNTTIASLPKAKKKIAKAA
Ga0311339_103697042	3300029999	Palsa	MSAEGRERILQAQIKRLAASKSASKANMNETFGQLPKANKKTAKAA
Ga0311339_105207991	3300029999	Palsa	SKMSAEGRERIRQAQIKRWATFKSASKANMNETVAQLPRAKKKTAKAA
Ga0311344_104452421	3300030020	Bog	EGSKGRKRRKMSAEARERIREAQIKRWAALNTSKANMNTTVAPQPKVKKKTAKAA
Ga0311344_106902982	3300030020	Bog	MSAEGRERVQQAQIKRWAELKGASKANLNATVAPLPKAKKKAAKAA
Ga0302195_100282495	3300030051	Bog	IRQEQIECWAALNASKANMNATVAPLPKVKRKADKAA
Ga0311353_114365531	3300030399	Palsa	RERIRQAQIKRWAALKGASKAKVIATVAPRPKAKKKTAKAA
Ga0302192_103475202	3300030507	Bog	AEGRERVRQAQIKRWAALKGASKANLNATVAPLPKAKKKAARAA
Ga0311345_101018741	3300030688	Bog	ERVRQAQIKRWAALKGVSKANLNATVAPQLKAKKKAAKAA
Ga0302308_102614072	3300031027	Palsa	MSAEGRERIRQAQIKRWATLNSAPKANMNETVAQLPKAKKKAAKAA
Ga0302325_104868781	3300031234	Palsa	KRSKMSAEGRERIRHAQIKRWATLKSASKANMNETVAQLPKAKKKAAKAA
Ga0302318_101184442	3300031258	Bog	MSAEGRERVRLAQIKRWAALKSASKANLNATVAPLPKAKKKTVKAA
Ga0302318_104706362	3300031258	Bog	MSVEARERIRQAQIKRWAALKTPKENLNARVAPLPKA
Ga0302187_100919063	3300031259	Bog	RKRSKMSAEGRERIRHAQIKRWATLKSASKANMNETVAQLPKAKKKAAKAA
Ga0302187_105682692	3300031259	Bog	NIPNAKKRKKMSAEGRERVRQAQIKRWAVLKGVSKANMNATVAPLPKGKKKAAKAA
Ga0302320_101897885	3300031524	Bog	MSAEARERIREAQIKRWAALNTSKANMNTTVAPQPKVKKKTAKAA
Ga0310686_1028557872	3300031708	Soil	MRRPANGAERIRQPQIKRWAALNAFKANMNSTVAPLPQAKKKAAKAA
Ga0302319_117526701	3300031788	Bog	ARERIWQAQIKRWAAVKGASKANMNATVEPLPKAKKKAAKAV
Ga0302322_1018646401	3300031902	Fen	AEARERIRQAQIKRWAALKGASKAKMNATVAPLPKAKKKATKAAWLA
Ga0326728_101036212	3300033402	Peat Soil	MSAEARERIRQAQVKRWAALKGTSKANLNATVAPLPKAKKKAAKAV
Ga0326728_109780631	3300033402	Peat Soil	MSAEGWERIRQAQIKRWTALNAFKANMNATVAPLPKAKKKAAKAA
Ga0334828_101564_484_624	3300033822	Soil	MSAEGRERVRQAQIKRWAALKGVSKANLNATVAPQLKAKKKAAKAA
Ga0334840_009002_3513_3650	3300033824	Soil	MSAEAREHIRQEQIECWAALNASKANMNATVAPLPKVKRKADKAA
Ga0334840_171195_443_562	3300033824	Soil	IRQAQIKRWAAVKRAAKPDANAVAVLPSKAKKKAARDAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078104

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences