Metagenome Family F078093

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078093
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	61 residues
Representative Sequence	VNDPVLLEARIRLQVALLRELAAKTAVEWGRATMRERYANSGNPLLRELARRMPPIPPPRVD
Number of Associated Samples	54
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.72 %
% of genes near scaffold ends (potentially truncated)	32.76 %
% of genes from short scaffolds (< 2000 bps)	85.34 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.310 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.931 % of family members)
Environment Ontology (ENVO)	Unclassified (62.069 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03401	TctC	7.76
PF04392	ABC_sub_bind	4.31
PF02357	NusG	1.72
PF08241	Methyltransf_11	0.86
PF05050	Methyltransf_21	0.86
PF13360	PQQ_2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	7.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.31
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	1.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.31 %
Unclassified	root	N/A	45.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.31 %
Unclassified	root	N/A	45.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.31 %
Unclassified	root	N/A	45.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.72 %
Unclassified	root	N/A	45.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24.14 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	17.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.31 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.72 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	4.31 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.72 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10248393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	953	Open in IMG/M
3300005332\|Ga0066388_101381183	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300005332\|Ga0066388_102136610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	1008	Open in IMG/M
3300005332\|Ga0066388_104415068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	717	Open in IMG/M
3300005332\|Ga0066388_105140025	Not Available	664	Open in IMG/M
3300005332\|Ga0066388_105808833	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300005332\|Ga0066388_106740325	Not Available	578	Open in IMG/M
3300005332\|Ga0066388_107445629	Not Available	549	Open in IMG/M
3300005713\|Ga0066905_101793589	Not Available	566	Open in IMG/M
3300005764\|Ga0066903_100033150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5901	Open in IMG/M
3300005764\|Ga0066903_100510238	All Organisms → cellular organisms → Bacteria → Proteobacteria	2042	Open in IMG/M
3300005764\|Ga0066903_100651077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1842	Open in IMG/M
3300005764\|Ga0066903_100796473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1689	Open in IMG/M
3300005764\|Ga0066903_101120925	Not Available	1453	Open in IMG/M
3300005764\|Ga0066903_101931390	All Organisms → cellular organisms → Bacteria → Proteobacteria	1131	Open in IMG/M
3300005764\|Ga0066903_102340442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1032	Open in IMG/M
3300005764\|Ga0066903_102722213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300005764\|Ga0066903_103095191	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300005764\|Ga0066903_104299787	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300005764\|Ga0066903_104669164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300005764\|Ga0066903_105766308	Not Available	651	Open in IMG/M
3300005764\|Ga0066903_107152503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	578	Open in IMG/M
3300005764\|Ga0066903_107165036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	577	Open in IMG/M
3300009792\|Ga0126374_10118888	Not Available	1540	Open in IMG/M
3300010043\|Ga0126380_10580267	Not Available	878	Open in IMG/M
3300010046\|Ga0126384_10334019	Not Available	1258	Open in IMG/M
3300010046\|Ga0126384_10402417	All Organisms → cellular organisms → Bacteria → Proteobacteria	1156	Open in IMG/M
3300010048\|Ga0126373_11442397	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300010358\|Ga0126370_10303803	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300010358\|Ga0126370_11454177	Not Available	649	Open in IMG/M
3300010358\|Ga0126370_11528059	Not Available	636	Open in IMG/M
3300010359\|Ga0126376_11135369	Not Available	792	Open in IMG/M
3300010360\|Ga0126372_11212825	Not Available	779	Open in IMG/M
3300010360\|Ga0126372_13048374	Not Available	520	Open in IMG/M
3300010361\|Ga0126378_11238708	Not Available	843	Open in IMG/M
3300010366\|Ga0126379_10514897	Not Available	1270	Open in IMG/M
3300010366\|Ga0126379_11680968	Not Available	740	Open in IMG/M
3300010376\|Ga0126381_100163667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2937	Open in IMG/M
3300010376\|Ga0126381_103655398	Not Available	602	Open in IMG/M
3300010398\|Ga0126383_10067587	All Organisms → cellular organisms → Bacteria → Proteobacteria	3057	Open in IMG/M
3300010398\|Ga0126383_10283012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1647	Open in IMG/M
3300016270\|Ga0182036_10286389	All Organisms → cellular organisms → Bacteria → Proteobacteria	1248	Open in IMG/M
3300016270\|Ga0182036_10360516	Not Available	1123	Open in IMG/M
3300016294\|Ga0182041_11295902	Not Available	666	Open in IMG/M
3300016294\|Ga0182041_11697129	Not Available	584	Open in IMG/M
3300016319\|Ga0182033_10106568	All Organisms → cellular organisms → Bacteria → Proteobacteria	2075	Open in IMG/M
3300016319\|Ga0182033_11541345	Not Available	600	Open in IMG/M
3300016319\|Ga0182033_11872321	Not Available	545	Open in IMG/M
3300016341\|Ga0182035_10141740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1832	Open in IMG/M
3300016341\|Ga0182035_11863431	Not Available	545	Open in IMG/M
3300016341\|Ga0182035_12137658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	508	Open in IMG/M
3300016357\|Ga0182032_10327319	Not Available	1219	Open in IMG/M
3300016371\|Ga0182034_10107372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2015	Open in IMG/M
3300016371\|Ga0182034_11215393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	656	Open in IMG/M
3300016422\|Ga0182039_10131517	All Organisms → cellular organisms → Bacteria → Proteobacteria	1906	Open in IMG/M
3300016422\|Ga0182039_10211973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300016422\|Ga0182039_10933594	Not Available	776	Open in IMG/M
3300016445\|Ga0182038_10743170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	857	Open in IMG/M
3300016445\|Ga0182038_11454484	Not Available	615	Open in IMG/M
3300021560\|Ga0126371_13007956	Not Available	571	Open in IMG/M
3300021560\|Ga0126371_13343199	Not Available	542	Open in IMG/M
3300021560\|Ga0126371_13772614	Not Available	511	Open in IMG/M
3300031543\|Ga0318516_10019869	All Organisms → cellular organisms → Bacteria	3415	Open in IMG/M
3300031545\|Ga0318541_10140787	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300031545\|Ga0318541_10407023	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300031545\|Ga0318541_10656662	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300031546\|Ga0318538_10334420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	817	Open in IMG/M
3300031573\|Ga0310915_10051376	All Organisms → cellular organisms → Bacteria → Proteobacteria	2661	Open in IMG/M
3300031668\|Ga0318542_10156891	Not Available	1134	Open in IMG/M
3300031679\|Ga0318561_10007028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4708	Open in IMG/M
3300031679\|Ga0318561_10028486	All Organisms → cellular organisms → Bacteria	2675	Open in IMG/M
3300031679\|Ga0318561_10582091	Not Available	616	Open in IMG/M
3300031713\|Ga0318496_10056888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2036	Open in IMG/M
3300031736\|Ga0318501_10017403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2950	Open in IMG/M
3300031744\|Ga0306918_10038842	Not Available	3080	Open in IMG/M
3300031744\|Ga0306918_10757016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	759	Open in IMG/M
3300031799\|Ga0318565_10205141	Not Available	958	Open in IMG/M
3300031833\|Ga0310917_10260237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300031845\|Ga0318511_10354354	Not Available	668	Open in IMG/M
3300031846\|Ga0318512_10098662	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300031879\|Ga0306919_10234904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1375	Open in IMG/M
3300031879\|Ga0306919_10273653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	1276	Open in IMG/M
3300031879\|Ga0306919_10282884	Not Available	1255	Open in IMG/M
3300031879\|Ga0306919_10893686	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300031879\|Ga0306919_11070618	Not Available	615	Open in IMG/M
3300031890\|Ga0306925_10101762	All Organisms → cellular organisms → Bacteria → Proteobacteria	3058	Open in IMG/M
3300031890\|Ga0306925_11731224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300031890\|Ga0306925_12262645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	503	Open in IMG/M
3300031897\|Ga0318520_10281672	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300031910\|Ga0306923_10340121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1712	Open in IMG/M
3300031910\|Ga0306923_11215645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	805	Open in IMG/M
3300031912\|Ga0306921_10171954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2538	Open in IMG/M
3300031912\|Ga0306921_11542587	Not Available	724	Open in IMG/M
3300031941\|Ga0310912_10516198	Not Available	931	Open in IMG/M
3300031942\|Ga0310916_10255845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1476	Open in IMG/M
3300031945\|Ga0310913_10870082	Not Available	634	Open in IMG/M
3300031945\|Ga0310913_10954890	Not Available	602	Open in IMG/M
3300031954\|Ga0306926_11093456	Not Available	943	Open in IMG/M
3300031954\|Ga0306926_12969135	Not Available	507	Open in IMG/M
3300032025\|Ga0318507_10113587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1138	Open in IMG/M
3300032025\|Ga0318507_10232023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	799	Open in IMG/M
3300032052\|Ga0318506_10002978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4780	Open in IMG/M
3300032059\|Ga0318533_11453882	Not Available	500	Open in IMG/M
3300032064\|Ga0318510_10345714	Not Available	626	Open in IMG/M
3300032076\|Ga0306924_11978185	Not Available	602	Open in IMG/M
3300032076\|Ga0306924_12282019	Not Available	549	Open in IMG/M
3300032261\|Ga0306920_100164568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3306	Open in IMG/M
3300032261\|Ga0306920_100587015	All Organisms → cellular organisms → Bacteria → Proteobacteria	1649	Open in IMG/M
3300032261\|Ga0306920_100977029	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300032261\|Ga0306920_102100628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	788	Open in IMG/M
3300032261\|Ga0306920_103038496	Not Available	632	Open in IMG/M
3300032261\|Ga0306920_103869996	Not Available	546	Open in IMG/M
3300032261\|Ga0306920_104014971	Not Available	534	Open in IMG/M
3300032261\|Ga0306920_104116081	Not Available	526	Open in IMG/M
3300033289\|Ga0310914_11498231	Not Available	578	Open in IMG/M
3300033290\|Ga0318519_11065356	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.17%
Loam	Environmental → Terrestrial → Soil → Loam	19.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.10%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_102483931	3300004633	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTAVEWGRATMRERYANSGNPILRELARRLPPVPPPRVD*
Ga0066388_1013811832	3300005332	Tropical Forest Soil	MSNPALEARIQVQVALLRELAARTALEWVRATMRERYAKSGNPILRELARRLPPIPPPRVD*
Ga0066388_1021366101	3300005332	Tropical Forest Soil	MALSPEVLEARIQLQVALLRELAAKTAVEWGRATMRERYANSGNPILRELARRLPPVPPPRVD*
Ga0066388_1044150681	3300005332	Tropical Forest Soil	MSDPALEARIQVQVALLRELAAKTALEWVRATMRERYAKSGNPILRELARRLPPVPPPRVD*
Ga0066388_1051400252	3300005332	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTAFEWGRATMRQRFANSGNPILQELARRLPPVPPPRVD*
Ga0066388_1058088332	3300005332	Tropical Forest Soil	MRDPALVEARIEVQVALLRVLAAKTAVEWGRATTRERYAKSANPILRALARRLPPLSPPRVD*
Ga0066388_1067403252	3300005332	Tropical Forest Soil	MPLSPEILEARIQLQVALLRELAAKTAFEWGRATMRERFANSENPILQELARRLPPVPPPRVD*
Ga0066388_1074456292	3300005332	Tropical Forest Soil	MSDPVLEARIQLQVALLRELAAKTAAEWVRATMRDRYAKSGNPILRELARRLPPVPPPRVD*
Ga0066905_1017935891	3300005713	Tropical Forest Soil	MSDPVLVEARIQVRVAELRELAAKTAFEWGRATMRERFANSGNPILQELARRLPYIPPPRVD*
Ga0066903_1000331509	3300005764	Tropical Forest Soil	MSDPVLEARIQLQVVLLRELAAKTALEWVRATMRERYAKSGNPILRALARHLPPTPPPRVD*
Ga0066903_1005102385	3300005764	Tropical Forest Soil	MSDPVLVEARIQLQVALLRELAAKTAVEWGRATMRERYANSGNPILRELARRLPPIPPPRVD*
Ga0066903_1006510774	3300005764	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAARTALEWTRATTRERFANSGNPILQALARRLPYIPPPRVD*
Ga0066903_1007964734	3300005764	Tropical Forest Soil	MSDPVLEARIWVQVALLRELAAKTAVEWARATTRERYAKSENPILRALARHMPPLPPPRVD*
Ga0066903_1011209252	3300005764	Tropical Forest Soil	MVSVMALNPEVLEARIKLQVALLRELAAQTAYDWTRATTRERYEKSNNPILRAVARYLPPDPPKPQID*
Ga0066903_1019313901	3300005764	Tropical Forest Soil	MNDDPVLEARIRLQIAMLRELAAKTALEWTRATMRERFARSGNPILRELARRLPILPVPRID*
Ga0066903_1023404423	3300005764	Tropical Forest Soil	MPLSPELLEARIEVRVAELREVAAKTAYDWGRATTRERYAKSANPLLRELARRMPYIPPPRVD*
Ga0066903_1027222132	3300005764	Tropical Forest Soil	MALSPEVIEARIEVRVADLRVLAAKTALEWDRATMRDRFAKSGNPILQALARRLPPVPPPRVD*
Ga0066903_1030951912	3300005764	Tropical Forest Soil	MPLSPELLEARIEVQVALLRELAAKTAVEWGRATMRERYANSGNPILQALARRLPPVPPPRVD*
Ga0066903_1042997871	3300005764	Tropical Forest Soil	MSDPVLVEARIQLQIALLRELAAKTAFEWGRATMRERFANSGNPILQELAR
Ga0066903_1046691642	3300005764	Tropical Forest Soil	MPLSPELLEARIEVQVALLRELAAKTAVDWGRATMRERYANSGNPILQALARRLPILPVPRID*
Ga0066903_1057663082	3300005764	Tropical Forest Soil	MPLSPEMIATRIEVRVAELRELAARTAVDWGRATMRDRYASSKNPLLQELARRLPYIPPPRVD*
Ga0066903_1071525031	3300005764	Tropical Forest Soil	MALSPEVLEARIQLQVALLRELAAKTAVEWGRATMRERFANSGNPILRALARR
Ga0066903_1071650362	3300005764	Tropical Forest Soil	MPLSPEMLEARIEVQVALLRELAAKTAVEWGRATMRERYANSGNPILRELARRLPPVPPPRVD*
Ga0126374_101188883	3300009792	Tropical Forest Soil	MSDPVLVEARIQVRVAELRELAAKTAAEWVRATMRERYAKSGNPILRELARRLPPVPPPRVD*
Ga0126380_105802672	3300010043	Tropical Forest Soil	MSDPVLVEARIQLQVALLRELAAKTAFEWGRATMRERFANSGNPILQELARRLPYIPPPRVD*
Ga0126384_103340191	3300010046	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTAFEWGRATMRQRFANSGNPILQELARRLPILPVPRID*
Ga0126384_104024171	3300010046	Tropical Forest Soil	MNDPVLEARIELQVALLRELAAKTAFEWVRATTRERYAKSGNPILRELARRLPPLPPPRVD*
Ga0126373_114423972	3300010048	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTAFEWGRATMRERFANSGNPILQELARRLPPVPP
Ga0126370_103038033	3300010358	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTAFEWGRATMRQRFANSENPILQELARRLPPIPPPSVD*
Ga0126370_114541772	3300010358	Tropical Forest Soil	MSDPVLVEARIQLQVALLRELAAKTAVEWGRATMRERFAKSGNPILRELARRLPPVPLPRVD*
Ga0126370_115280592	3300010358	Tropical Forest Soil	MSDPVLVEARIQLQVALLRELAAKTAFEWGRATMRERFANSGNPILQELARRLPPVPPPRVD*
Ga0126376_111353692	3300010359	Tropical Forest Soil	MPLSPEILEARIEVQVALLRELAARTALEWTRATTRERYANSGNPILQALARRLPYIPPPRVD*
Ga0126372_112128251	3300010360	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTALEWTRATTRERYAKSGNPILQELARRLPPVPPPSVD*
Ga0126372_130483741	3300010360	Tropical Forest Soil	SSYGRCSGRITAMPLSPEILEARIQVQVALLRELAAKTAFEWGRATMRQRFANSGNPILRELARRLPILPVPRID*
Ga0126378_112387081	3300010361	Tropical Forest Soil	MLEARIDVRVAELRELAARTALEWTRATTRERYASSGNPILRALARRLPYIPPPRVD*
Ga0126379_105148972	3300010366	Tropical Forest Soil	MLEARIDVRVAELRELAARTALEWTRATTRERYASSGNPILQALARRLPYIPPPRVD*
Ga0126379_116809681	3300010366	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTALEWSRATTRERYAKSGNPILQELARRLPP
Ga0126381_1001636675	3300010376	Tropical Forest Soil	MPLSPEMLEARIQVRVAELRELAARTALEWTRATTRERYASSGNPILQALARRLPYIPPPRVD*
Ga0126381_1036553981	3300010376	Tropical Forest Soil	RRSSYGRCSGRITAMPLSPEILEARIQVRVAELRELAAKTAFEWGRATMRQRFANSENPILQELARRLPPVPPPRVD*
Ga0126383_100675872	3300010398	Tropical Forest Soil	MPLSPELLEARIQVRVAELRELAAKTAFEWGRATMRQRFANSENPILQELARRLPPVPPPRVD*
Ga0126383_102830122	3300010398	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTAFDWGRATMRQRFANSGNPILQELARRLPPVPPPRVD*
Ga0182036_102863892	3300016270	Soil	VNDPVLLEARIRLQVALLRELAAKTAVEWGRATMRERFANSGNPILRELARRMPPSLPPPSVD
Ga0182036_103605163	3300016270	Soil	LSPEVLEARIELEVARLRTLAAQTAVDWGRATMRERYINSGNPILRDLARRLPPSPPSSI
Ga0182041_112959022	3300016294	Soil	VAVNDPVLLEARIRLQVALLRELAAKTALEWVRATERERYAKSGNPLLRELARRMPPLPPPRVD
Ga0182041_116971291	3300016294	Soil	VAVNDPVLLEARIRLQVALLRELAAKTAVEWGRATMRERYANSGNPLLRELARRLPPPPPVNLR
Ga0182033_101065681	3300016319	Soil	VNDPVLLEARIRLQVALLRELAAKTALEWVRATERERYAKSGNPLLRELARRMPPLP
Ga0182033_115413452	3300016319	Soil	MNDPALVEARICVQVALLRELAAKTALEWTRATERERYANSGNPLLRALARRMPPLPPPSVD
Ga0182033_118723212	3300016319	Soil	VLLEARIRLQVALLRELAARTALEWTRATERERYANSGNPILQELARRMPPLLPPSVD
Ga0182035_101417401	3300016341	Soil	MNDPALIEARIRLQVALLRELAAKTAFEWGRATMRERFANSGNPILQELARRLPPVPPPRVD
Ga0182035_118634311	3300016341	Soil	VNDPVLLEARIRVQVALLRELAARTALEWVRATERERYAKSGNPLLRELARRMPPLPPPRVD
Ga0182035_121376582	3300016341	Soil	MNDPLLEARIRLQVALLRELAAKTAVEWTRATMRERLAKSGNPILRELARRMPPPPSVN
Ga0182032_103273193	3300016357	Soil	MNDPLLEARIRLQVALLRELAARTAVEWDRATMRERYAKSGNPILQEMARRMPRPPSVNW
Ga0182034_101073722	3300016371	Soil	MNDPLLEARIRLQVALLRELAAKTAVEWDRATMRERYAKSGNPILQEMARRMPRPPSVNW
Ga0182034_112153931	3300016371	Soil	MREVAVNDPVLLEARIRVQVALLRELAAKTALDWVRATARERYANSGNPILRELARRM
Ga0182039_101315171	3300016422	Soil	VNDPVLLEARIRLQVALLRELAAKTALEWTRATERERYANSGNPLLRALARRLPPPPPVNLR
Ga0182039_102119732	3300016422	Soil	VSDPVREARIQLQVALLRELAAKTALEWVRATERERYAKSGNPLLRELARRMPPLPPPRV
Ga0182039_109335942	3300016422	Soil	MNDPLLEARIRLQVARLRELAARTALEWTRATERERYANSGNPLLRELARRMPPPPPVNL
Ga0182038_107431701	3300016445	Soil	VIDPVVLEARIRLQVALLRELAARTALEWTRATERERYANSGNPILRALARRMPPLPPPS
Ga0182038_114544842	3300016445	Soil	MRDPVLVEARIRVQIAQLRELAAKTALEWTRATARERYAKSGNPILRELARRMPPLLPPSVD
Ga0126371_130079562	3300021560	Tropical Forest Soil	MPLSPEILEARIEVQVALLRELAAKTAFEWGRATMRERFAKSGNPILQELARRLPPVPPPRVD
Ga0126371_133431991	3300021560	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAAKTALEWTRATTRERYAKSGNPILQELARRLPPVPPPRVD
Ga0126371_137726142	3300021560	Tropical Forest Soil	MPLSPEILEARIQVRVAELRELAARTALEWTRATTRERFANSGNPILQALARRLP
Ga0318516_100198692	3300031543	Soil	MSDPVLVEARIQLQVALLRELAAKTAVEWDRVTMRERFAKSGNPILRELARRLPPLPPPSVN
Ga0318541_101407873	3300031545	Soil	VNDPVLLEARIRLQVALLRELAAKTAVEWVRATARERYANSGNPILRELARRLPPLLPPSVD
Ga0318541_104070232	3300031545	Soil	MALSPEVLEARIELEVARLRTLAAQTAVDWGRATMRERYINSGNPILRDLARRLPPSPPS
Ga0318541_106566621	3300031545	Soil	MSDPALEARIQLQVALLRELAAKTALEWVRATERERYAKSGNPLLRELARRMPPLPPPRV
Ga0318538_103344202	3300031546	Soil	VIDPVVLEARIRLQVALLRELAARTALEWTRATERERYANSGNPILRALARRMPPLPPPSVN
Ga0310915_100513765	3300031573	Soil	VNDPVLLEARIRLQVALLRELAAKTAVEWGRATMRERYANSGNPLLRELARRLPPPPPVNLR
Ga0318542_101568911	3300031668	Soil	VNDPVLLEARIRLQVALLRELAAKTALEWVRATERERYAKSGNPLLRELARRMPPLPPPRVD
Ga0318561_100070281	3300031679	Soil	MSDPVLVEARIQLQVALLRELAAKTAVEWDRVTMRERFAKSGNPILRELARRAASAAAVG
Ga0318561_100284866	3300031679	Soil	IQLQVALLRELAAKTAVEWDRVTMRERFAKSGNPILRELARRLPPLPPPSVN
Ga0318561_105820911	3300031679	Soil	CSGRITAMPLSPEILEARIQVQVALLRELAAKTAFEWGRATMRERFANSGNPILQELARRLPPVPPPRVD
Ga0318496_100568884	3300031713	Soil	VRDPVLLEARIRVQVALLRELAAKTALEWTRATARERYANSGNPTLQALARRMPPLLPPSVD
Ga0318501_100174035	3300031736	Soil	PVLLEARIRVQVALLRELAAKTALEWTRATARERYANSGNPTLQALARRMPPLLPPSVD
Ga0306918_100388422	3300031744	Soil	MNDPLLEACIRLQVARLRELAARTAVEWDRATMRERYAKSGNPILQEMARRMPRPPSVNW
Ga0306918_107570162	3300031744	Soil	MNDPVLLEARIRVQVALLRELAAKTALEWTRATARERYANSGNPTLQALARRMPPLLPPSVD
Ga0318565_102051411	3300031799	Soil	PGGVMSDPVLVEARIQLQVALLRELAAKTAVEWDRVTMRERFAKSGNPILRELARRLPPLPPPSVN
Ga0310917_102602373	3300031833	Soil	MVDVMALSPEVLEARIELEVARLRTLAAQTAVDWGRATMRERYINSGNPILRDLARRLPPSPPSSID
Ga0318511_103543542	3300031845	Soil	EGGCAMNDPVLLEARIRVQVALLRELAAKTALEWTRATARERYANSGNPTLQALARRMPPLLPPSVD
Ga0318512_100986622	3300031846	Soil	MSDPVLVEARIQLQVALLRELAAKTAVEWDRVTMRERFAKSGNPILRELARRLPPLPP
Ga0306919_102349043	3300031879	Soil	VNDPVLLEARIRVQVALLRELAAKTALDWVRATARERYANSGNPILRELARR
Ga0306919_102736532	3300031879	Soil	MPLSPEILEARIQVQVALLRELAAKTAFEWGRATMRERFANSGNPILQELARRLPPVPPPRVD
Ga0306919_102828843	3300031879	Soil	LEACIRLQVARLRELAARTAVEWDRATMRERYAKSGNPILQEMARRMPRPPSVNWR
Ga0306919_108936861	3300031879	Soil	MREGEVNDPVLREARIQVQIAQLRELAAKTALDWTRATERERYANSGNPLLRELARRMPPIPPPRVD
Ga0306919_110706182	3300031879	Soil	MNDPVLLEARIRLQVALLRELAARTAVEWGRATMRERFANSGNPILRELARRMPPSLPPPSVD
Ga0306925_101017626	3300031890	Soil	MALSPEVLEARIELEVARLRTLAAQTAVDWGRATMRERYINSGNPILRDLARRLPPSPPSSID
Ga0306925_117312241	3300031890	Soil	MDDPALLEARIRVQVALLRELAARTALEWTRATERERYANSGNPLLRELARRLPPLSPPRVD
Ga0306925_122626451	3300031890	Soil	MRDPVLVEARIRVQIAQLRELAAKTALEWTRATERERYLKSGNPILQALARRMPPLLPPSVD
Ga0318520_102816721	3300031897	Soil	MALSPEVLEARIRVQVALLRELAAKTAVEWDRATMRERYANSGNPILRALARRLPP
Ga0306923_103401214	3300031910	Soil	VNDPVLLEARIRLQVALLRELAAKTAVEWGRATMRERYANSGNPLLRELARRMPPIPPPRVD
Ga0306923_112156452	3300031910	Soil	MDDPALLEARIRVQVALLRELAARTALEWTHATARERYANSGNPLLRELARRMPPPPPVNLR
Ga0306921_101719544	3300031912	Soil	MPLSPEILEARIQVRVAQLRELAAKTAVEWGRATMRERFANSGNPILQELARRLPPVPPPRVD
Ga0306921_115425871	3300031912	Soil	LEARIAVQVALLRELAARTALEWTRATERDRYLKSGNPLLRELARRMPPLLPPSVD
Ga0310912_105161983	3300031941	Soil	MNDPLLEARIRLQIALLRELAAKTAVEWDRATMRERYAKSGNPILQEMARRMPRPPSVNW
Ga0310916_102558454	3300031942	Soil	MALSPEVLEARIRVQVALLRELAARTAVEWDRATQRERYANSQNPILRAVARRLPPSPPP
Ga0310913_108700822	3300031945	Soil	VNDPVLREARIQVQIAQLRELAAKTALDWTRATERERYANSGNPLLRELARRMPPIPPPRVD
Ga0310913_109548902	3300031945	Soil	RARQYRSMREVAVNDPVLLEARIRLQVALLRELAAKTAVEWVRATARERYANSGNPILRELARRLPPLLPPSVD
Ga0306926_110934562	3300031954	Soil	MDDPLLEARIRVQVALLRELAAKTALEWTRATERERYANSGNPLLRELARRLPPLSPPRV
Ga0306926_129691351	3300031954	Soil	LLEARIRLQVALLRELAAKTAVEWGRATMRERYANSGNPLLRELARRLPPPPPVNLR
Ga0318507_101135872	3300032025	Soil	MNDPVLLEARIQYRIALLRELAARTAVEWDRATARERYLKSGNPILQALARRMPPLLPPSVD
Ga0318507_102320232	3300032025	Soil	VNDPVLLEARIRLQVALLRELAAKTAVEWGRATMRERYANSGNPLLRELARRLPPPPPVN
Ga0318506_100029784	3300032052	Soil	MSDPVLVEARIQLQVALLRELAAKTAVEWDRVTMRERFARSGNPILRELARRLPPLPPPSVN
Ga0318533_114538821	3300032059	Soil	MSDPVREARIQLQVALLRELAAKTALEWVRATERERYAKSGNPLLRELARRMPPLPPPRV
Ga0318510_103457141	3300032064	Soil	VSDPVREARIQVQVALLRELAAKTALEWVRATERERYAKSGNPLLRELARRMPPIPPPSV
Ga0306924_119781852	3300032076	Soil	VRNPVLVEAGIQLQVALLRELAARTALEWTRATARERYLKSGNPILRELARRMPPLLPPSVD
Ga0306924_122820192	3300032076	Soil	LELCDPVLLEARIRLQVALLRELAARTALEWTRATERERYANSGNPLLRELARRLPPLSPPRVD
Ga0306920_1001645684	3300032261	Soil	MVNPMALDPSVLEARIRLQVALLRELAARTAVEWDRATQRERYANSGNPILRALARRLPPPLQPPHID
Ga0306920_1005870152	3300032261	Soil	MNDPVLREARIRVQIALLRELAAKTALEWVRATERERYANSGNPILQELARRMPPLLPPSVD
Ga0306920_1009770291	3300032261	Soil	MSDPALEARIQLQVALLRELAAKTALEWVRATERERYAKSGNPLLRELARRLPP
Ga0306920_1021006281	3300032261	Soil	VNDPVLLEARIRLQVALLRELAARTAVEWDRATMRERYLRSGNPILRELARAHAAAAGTASCRLK
Ga0306920_1030384962	3300032261	Soil	MREGAVNDPVLLEARIRVQVALLRELAAKTALEWVRATARERYANSGNPILQALARRMPPLLPPSVD
Ga0306920_1038699961	3300032261	Soil	LEARIRLQVALLRELAAKTALEWTRATARERYAKSGNPLLRELARRMPPPPAVN
Ga0306920_1040149711	3300032261	Soil	MSDPVLVEARIRVQVALLRELAARTALEWVRATERERYAKSGNPLLRELARRMPPLPPPPLVD
Ga0306920_1041160812	3300032261	Soil	VRDPVLVEAGIRLQVALLRELAARTAVEWDRVTMRERYLKSGNPILRALARRMPPLPPPSMD
Ga0310914_114982313	3300033289	Soil	IRLQVALLRELAARTAVEWDRATQRERYANSGNPILRALARRLPPPLQPPHID
Ga0318519_110653561	3300033290	Soil	EARIELEVARLRTLAAQTAVDWGRATMRERYINSGNPILRDLARRLPPSPPSSID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078093

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences