NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F078070

Metagenome Family F078070

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078070
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 44 residues
Representative Sequence RNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPH
Number of Associated Samples 66
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 13.79 %
% of genes near scaffold ends (potentially truncated) 92.24 %
% of genes from short scaffolds (< 2000 bps) 95.69 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (50.862 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(60.345 % of family members)
Environment Ontology (ENVO) Unclassified
(98.276 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(60.345 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 33.78%    β-sheet: 0.00%    Coil/Unstructured: 66.22%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF10011DUF2254 12.07
PF01464SLT 5.17
PF11339DUF3141 4.31
PF02518HATPase_c 3.45
PF16884ADH_N_2 2.59
PF00589Phage_integrase 1.72
PF00999Na_H_Exchanger 1.72
PF09865DUF2092 1.72
PF13495Phage_int_SAM_4 0.86
PF12833HTH_18 0.86
PF11994DUF3489 0.86
PF04366Ysc84 0.86
PF01758SBF 0.86
PF00005ABC_tran 0.86
PF00211Guanylate_cyc 0.86
PF12728HTH_17 0.86
PF00665rve 0.86
PF00078RVT_1 0.86
PF00873ACR_tran 0.86
PF00497SBP_bac_3 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 1.72
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 1.72
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 1.72
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 1.72
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 1.72
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.86
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.86
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.86
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 0.86
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.86
COG4584TransposaseMobilome: prophages, transposons [X] 0.86


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.72 %
UnclassifiedrootN/A48.28 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300010376|Ga0126381_102715503Not Available708Open in IMG/M
3300016270|Ga0182036_10307334All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium1208Open in IMG/M
3300016294|Ga0182041_10358097All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300016294|Ga0182041_10507064Not Available1047Open in IMG/M
3300016294|Ga0182041_11529589All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300016294|Ga0182041_12302932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium504Open in IMG/M
3300016319|Ga0182033_10537486All Organisms → cellular organisms → Bacteria → Proteobacteria1009Open in IMG/M
3300016319|Ga0182033_12197428Not Available503Open in IMG/M
3300016341|Ga0182035_10641033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria921Open in IMG/M
3300016357|Ga0182032_10120507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1891Open in IMG/M
3300016357|Ga0182032_10538631All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. WF1965Open in IMG/M
3300016357|Ga0182032_11764067Not Available540Open in IMG/M
3300016357|Ga0182032_11892336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300016371|Ga0182034_11390441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales613Open in IMG/M
3300016387|Ga0182040_10754459Not Available799Open in IMG/M
3300016387|Ga0182040_10840255All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300016387|Ga0182040_11831598All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → Fundidesulfovibrio putealis520Open in IMG/M
3300016404|Ga0182037_10552237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria972Open in IMG/M
3300016422|Ga0182039_10271066Not Available1393Open in IMG/M
3300016422|Ga0182039_10397278Not Available1169Open in IMG/M
3300016422|Ga0182039_10428417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1129Open in IMG/M
3300016422|Ga0182039_11449769All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium624Open in IMG/M
3300016422|Ga0182039_12207013Not Available508Open in IMG/M
3300016422|Ga0182039_12251801Not Available503Open in IMG/M
3300016445|Ga0182038_10792632Not Available830Open in IMG/M
3300016445|Ga0182038_12010944Not Available523Open in IMG/M
3300021560|Ga0126371_13728712Not Available514Open in IMG/M
3300031543|Ga0318516_10184685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1202Open in IMG/M
3300031544|Ga0318534_10364186All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300031544|Ga0318534_10366898Not Available828Open in IMG/M
3300031545|Ga0318541_10120332Not Available1425Open in IMG/M
3300031545|Ga0318541_10577353Not Available629Open in IMG/M
3300031545|Ga0318541_10750010Not Available545Open in IMG/M
3300031546|Ga0318538_10162013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense1185Open in IMG/M
3300031546|Ga0318538_10508775Not Available653Open in IMG/M
3300031549|Ga0318571_10128281Not Available858Open in IMG/M
3300031561|Ga0318528_10025613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2862Open in IMG/M
3300031572|Ga0318515_10663135Not Available553Open in IMG/M
3300031573|Ga0310915_10269816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1199Open in IMG/M
3300031573|Ga0310915_10417443All Organisms → cellular organisms → Bacteria → Proteobacteria953Open in IMG/M
3300031640|Ga0318555_10702313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria547Open in IMG/M
3300031668|Ga0318542_10141396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1190Open in IMG/M
3300031668|Ga0318542_10384159All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria724Open in IMG/M
3300031679|Ga0318561_10045480All Organisms → cellular organisms → Bacteria → Proteobacteria2179Open in IMG/M
3300031679|Ga0318561_10514639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria659Open in IMG/M
3300031680|Ga0318574_10446784All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria756Open in IMG/M
3300031681|Ga0318572_10356990Not Available867Open in IMG/M
3300031682|Ga0318560_10067243Not Available1801Open in IMG/M
3300031682|Ga0318560_10464859Not Available685Open in IMG/M
3300031713|Ga0318496_10702078Not Available558Open in IMG/M
3300031719|Ga0306917_10008969All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5654Open in IMG/M
3300031719|Ga0306917_10346968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1153Open in IMG/M
3300031719|Ga0306917_11065072Not Available630Open in IMG/M
3300031723|Ga0318493_10718596Not Available560Open in IMG/M
3300031748|Ga0318492_10469712All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium666Open in IMG/M
3300031751|Ga0318494_10493145All Organisms → cellular organisms → Bacteria → Proteobacteria714Open in IMG/M
3300031763|Ga0318537_10036474Not Available1761Open in IMG/M
3300031764|Ga0318535_10539024Not Available518Open in IMG/M
3300031770|Ga0318521_10483868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria743Open in IMG/M
3300031771|Ga0318546_10347434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1032Open in IMG/M
3300031771|Ga0318546_10456571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales895Open in IMG/M
3300031782|Ga0318552_10109053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1372Open in IMG/M
3300031792|Ga0318529_10589852Not Available516Open in IMG/M
3300031793|Ga0318548_10412862Not Available662Open in IMG/M
3300031819|Ga0318568_10486949All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense769Open in IMG/M
3300031831|Ga0318564_10246037Not Available793Open in IMG/M
3300031833|Ga0310917_10408188Not Available923Open in IMG/M
3300031833|Ga0310917_10849121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria615Open in IMG/M
3300031833|Ga0310917_10946748Not Available579Open in IMG/M
3300031879|Ga0306919_10539015Not Available900Open in IMG/M
3300031879|Ga0306919_10789412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium730Open in IMG/M
3300031879|Ga0306919_10886864Not Available684Open in IMG/M
3300031880|Ga0318544_10444294Not Available505Open in IMG/M
3300031890|Ga0306925_10258454All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1876Open in IMG/M
3300031890|Ga0306925_11451419Not Available674Open in IMG/M
3300031893|Ga0318536_10649648Not Available526Open in IMG/M
3300031893|Ga0318536_10650805Not Available526Open in IMG/M
3300031894|Ga0318522_10318521All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300031897|Ga0318520_10816085All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales585Open in IMG/M
3300031897|Ga0318520_10940600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria545Open in IMG/M
3300031910|Ga0306923_10045024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium4840Open in IMG/M
3300031910|Ga0306923_11153267All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium831Open in IMG/M
3300031910|Ga0306923_12273774Not Available541Open in IMG/M
3300031912|Ga0306921_12058065Not Available606Open in IMG/M
3300031942|Ga0310916_10154930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1893Open in IMG/M
3300031942|Ga0310916_11134615All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia nodosa648Open in IMG/M
3300031942|Ga0310916_11376704Not Available578Open in IMG/M
3300031942|Ga0310916_11614017Not Available526Open in IMG/M
3300031945|Ga0310913_11304268Not Available503Open in IMG/M
3300031946|Ga0310910_10460461All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1009Open in IMG/M
3300031946|Ga0310910_10539946All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium925Open in IMG/M
3300031946|Ga0310910_11489642Not Available519Open in IMG/M
3300031947|Ga0310909_10743138All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. WF1813Open in IMG/M
3300031947|Ga0310909_11107902Not Available643Open in IMG/M
3300031954|Ga0306926_10838541All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300031954|Ga0306926_12459865All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium572Open in IMG/M
3300031981|Ga0318531_10254594Not Available792Open in IMG/M
3300032001|Ga0306922_11729136All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria618Open in IMG/M
3300032001|Ga0306922_12209695Not Available530Open in IMG/M
3300032025|Ga0318507_10498991Not Available530Open in IMG/M
3300032039|Ga0318559_10027728All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2236Open in IMG/M
3300032055|Ga0318575_10638219Not Available539Open in IMG/M
3300032059|Ga0318533_10818846Not Available683Open in IMG/M
3300032059|Ga0318533_11395960All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium511Open in IMG/M
3300032076|Ga0306924_11321505All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300032090|Ga0318518_10184975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1065Open in IMG/M
3300032090|Ga0318518_10248721All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense912Open in IMG/M
3300032091|Ga0318577_10648341Not Available501Open in IMG/M
3300032261|Ga0306920_103087985Not Available626Open in IMG/M
3300032261|Ga0306920_103522269Not Available578Open in IMG/M
3300033289|Ga0310914_10742621All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria878Open in IMG/M
3300033289|Ga0310914_11074362Not Available705Open in IMG/M
3300033290|Ga0318519_10061150All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium1921Open in IMG/M
3300033290|Ga0318519_10812935Not Available575Open in IMG/M
3300033290|Ga0318519_10855730Not Available561Open in IMG/M
3300033290|Ga0318519_11062446All Organisms → cellular organisms → Bacteria504Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil60.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil37.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0126381_10271550323300010376Tropical Forest SoilVRNIYKYYVAYKLIEEADAAKKAAIAGAKAQPAAAGVSPQPANPP*
Ga0182036_1030733423300016270SoilYKLIEEADAAKKAAIGTTKPAAAGTSAPPQPAKPR
Ga0182041_1035809723300016294SoilRYVRNIYKYYVAYKLIEVADAAKKAAIAAARTHPAAAGKPPQQAKPH
Ga0182041_1050706413300016294SoilVRNIYKYYVAYKLIEEADAAKKAAIGTTKPAAAGTSAPPQPAKPR
Ga0182041_1152958913300016294SoilQYVRNIYKYYVAYKLIEEADTAKKAAIAAGTTQPAAADTSAPPQPVKPH
Ga0182041_1230293213300016294SoilYYVAYKLIEEADAAKKAAIGTTDPAPAGTSAPPQPAKPR
Ga0182033_1053748613300016319SoilNIYKYYVAYKLIEEADAANKAAIGTTKPAAAGTSAPPQPAKPR
Ga0182033_1219742813300016319SoilNIYKYYVAYKLIEDADVAKKAAIAAAATHPTAAGTSAPTQPTKAP
Ga0182035_1064103323300016341SoilVRNIYKYYVAYKMIEEADTAKKAAITAGTTEPPAAGTSALPQPAKPH
Ga0182032_1012050713300016357SoilRYVRNIYKYYVAYKLIEEADAAKKAATAAAARGPTETGTSAPPPPANPH
Ga0182032_1053863113300016357SoilYYVAYKLIEEADTAKKAAIAAGTTQPAAADTSAPPQPVKPH
Ga0182032_1176406713300016357SoilNIYKYYVAYKLIDEADAAKRAAIAGAKTQPAAAVTSAPLQLAKPH
Ga0182032_1189233613300016357SoilRNIYKYYVAYKLIEEAEATKKAAIAGATTQPAAAGPPAPPQSGH
Ga0182034_1139044123300016371SoilYVAYKLIEEADAAKKAAIGTTVPAAAGKSATPQPAKPH
Ga0182040_1075445923300016387SoilGSAEEPVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPH
Ga0182040_1084025523300016387SoilVRYVRNIYKYYVGYKLIEEADAAKKAAIGAAPTEGAATGTSAPPQPAKAH
Ga0182040_1183159823300016387SoilVRNIYKYYVAYKLIEEADAAKKASIAATTTEPAAMGRSVPPA
Ga0182037_1055223713300016404SoilVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGN
Ga0182039_1027106623300016422SoilVRYVRNIYKYYVAYKLIEESDAAKKAAIAGATAQPSAAGTSAPPQPAQPH
Ga0182039_1039727813300016422SoilYKYYVAYKLIEEADAAKKAAIAAAPTEWIATGTSAPPQPAPR
Ga0182039_1042841723300016422SoilEEPVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQH
Ga0182039_1144976913300016422SoilKYYVAYKLIEEADAAKKAAIPAAATQPVAAGTSAPPQPATPH
Ga0182039_1220701323300016422SoilYVRNIYKYYVGYKLIEEADAAKKAAIGAAPTERAATGTSAPPQPAKAH
Ga0182039_1225180113300016422SoilAYKLIEAADAAKRAAVAGATTQPAAAGTSTPPQPAQPH
Ga0182038_1079263213300016445SoilYVRNIYKYYVAYKLIEEADAAKKAAIGTTKPAAAGTSAPPQPAKPR
Ga0182038_1201094423300016445SoilVRNIYKYYVAYKLIEEADAAKKAAIAAAPTPSVAAGTSTPPQPAKPH
Ga0126371_1372871213300021560Tropical Forest SoilYVAYKLIEEADAAKKAAIAATTTEPPAMGTSAPPQPANQR
Ga0318516_1018468523300031543SoilVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQR
Ga0318534_1036418613300031544SoilYKLIEEADAAKKAAIAAATTVPATAGTSAPPQPSNPH
Ga0318534_1036689823300031544SoilYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPH
Ga0318541_1012033213300031545SoilVRNIYKYYVAYKLIEEADAAKKAATAAAARGPTETGTSAPPPPANPH
Ga0318541_1057735313300031545SoilYYVAYKLIEEADTAKKAAIGAAKTRPAAAGANPPLGPAKPH
Ga0318541_1075001023300031545SoilVRNIYKYYVAYKLIEEADAAKKASITGAASQPAVAGTSTPPQPAKPH
Ga0318538_1016201323300031546SoilVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPAAAGTPAPPQPAKPR
Ga0318538_1050877513300031546SoilVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQR
Ga0318571_1012828123300031549SoilVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQH
Ga0318528_1002561333300031561SoilVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQAVARQSG
Ga0318515_1066313513300031572SoilNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQH
Ga0310915_1026981633300031573SoilVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPH
Ga0310915_1041744323300031573SoilVRNIYKYYVAYKLIEEAEAAKKAATAAAAREPTETGTSAPPPPAKPH
Ga0318555_1070231313300031640SoilVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQH
Ga0318542_1014139623300031668SoilYKLIEEADAAKKAAIGTTVPAAAGKSATPQPAKPH
Ga0318542_1038415913300031668SoilRNIYKYYVAYKLIEEADAAKKAAIAAAPTGPAAAGTSTQPQPAQPH
Ga0318561_1004548033300031679SoilVRNIYKYYVAYKLIEEAEATKKAAIPGATTQPAAAGTSAPPQPAKPH
Ga0318561_1051463913300031679SoilYKLIEEADAAKKAAITEAPSEPTAAGTSTPPQPAQPH
Ga0318574_1044678413300031680SoilIYKYYVAYKLIEEADAAKKAAITEAPSEPTAAGTSTPPQPAQPH
Ga0318572_1035699013300031681SoilRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPH
Ga0318560_1006724313300031682SoilYKYYVAYKLIEEADAAKKAAIAGTTTQPAGAGTSAPPQPAKQH
Ga0318560_1046485923300031682SoilYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQR
Ga0318496_1070207813300031713SoilYVRNIYKYYVAYKLIEEADAAKKAAIAAAPTEWIATGTSAPPQPAPR
Ga0306917_1000896913300031719SoilAYKLIEEAEATKKAAIAGATTQPAAAGTPAPPQPAKPR
Ga0306917_1034696813300031719SoilQYVRNIYKYYVAYKLIEEADAAKKAAIAAAPTEPAAVGTSAPLQPAQPH
Ga0306917_1106507213300031719SoilVRYVRNIYKYYVAYKLIEESDAAKKAAIAGATTKPAEAATPASPRPAKSH
Ga0318493_1071859623300031723SoilVSYKLIEEADAAKKAAIPAAATQPVAAGTSAPPQPATPH
Ga0318492_1046971223300031748SoilYKYYVAYKLIEEADAAKKAAIGTTKPAAAGTSAPPQPAKPR
Ga0318494_1049314523300031751SoilVRNIYKYYVAYKLIEEADTAKKAAIGTTVPAAAGTSATPQPAKPH
Ga0318537_1003647413300031763SoilQEPVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPAAAGTPAPPQPAKPR
Ga0318535_1053902423300031764SoilRNIYKYYVAYKLIEEAEAAKKAATAAAAREPTETGTSAPPPPAKPH
Ga0318521_1048386813300031770SoilAYKMIEEADTAKKAAITAGTTEPPAAGTSALPQPAKPH
Ga0318546_1034743423300031771SoilVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPH
Ga0318546_1045657133300031771SoilRNIYKYYVAYKLIEEADAAKKAATAAAAREPTETGTSAPPPLAKPH
Ga0318552_1010905333300031782SoilVQYVRNIYKYYVAYKLIEEADAAKKAAIGTTVPAAAGKSATPQPAKPH
Ga0318529_1058985223300031792SoilYVRNIYKYYVAYKLIEEAVATKKAAIAGATTQPVAAGNSAPPQPAKQH
Ga0318548_1041286213300031793SoilYYVAYKLIEEADAAKKAATAAAARGPTETGTSAPPPPANPH
Ga0318568_1048694913300031819SoilVQYVRNIYKYYVAYKLIEEADAAKKAAIGTTVPAAAGKSATPQ
Ga0318564_1024603713300031831SoilYKYYVAYKLIEEAEAAKKAATAAAAREPTETGTSAPPPPAKPH
Ga0310917_1040818813300031833SoilVAYKLIEEADAAKKAAIAAAPTEWIATGTSAPPQPAPR
Ga0310917_1084912113300031833SoilPVRYVRNIYKYYVAYKLIEESDAAKKAAIAGATAQPSAAGTSAPPQPAQPH
Ga0310917_1094674813300031833SoilIYKYYVAYKLIEEADAAKKAAITAAPREPATVGTSAPAQPAKPH
Ga0306919_1053901513300031879SoilYVAYKLIEEADAAKKAAIGTTKPAAAGTSAPPQPAKPR
Ga0306919_1078941213300031879SoilYKLIEEADAAKKAAIGTTDPAPAGTSAPPQPAKPR
Ga0306919_1088686423300031879SoilREPVRYVRNIYKYYVAYKLIEEADAAKKAAIAAAPTEWIATGTSAPPQPAPR
Ga0318544_1044429423300031880SoilYKYYVAYKLIEEADAAKKAAITEAPSEPTAAGTSTPPQPAQPH
Ga0306925_1025845413300031890SoilNIYKYYVAYKLIEEADAAKKAATAAAARGPTETGTSAPPPPANPH
Ga0306925_1145141913300031890SoilKLIEEADAAKKAAITATTTEPAVAGTSAPPKPTKPH
Ga0318536_1064964813300031893SoilQEPVRYVRNIYKYYVGYKLIEEADAAKKATIAATTTEPAVAGTSAPPKPAKPH
Ga0318536_1065080523300031893SoilTVQYVRNIYKYYVAYKLIEEADTAKMAAIGTTVPTAAGTSATPQPAKPH
Ga0318522_1031852113300031894SoilVQYVRNIYKYYVAYKLIEEADAAKKAAIGTTVPAAAGKSATPQPAKP
Ga0318520_1081608513300031897SoilYKYYVAYKLIEEADTAKKAAIGTTVPTAAGTSATPQPAKPH
Ga0318520_1094060023300031897SoilVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPQ
Ga0306923_1004502463300031910SoilIYKYYVAYKLIEEADAAKKAATAAAARGPTETGTSAPPPPANPH
Ga0306923_1115326713300031910SoilRYVRNIYKYYVAYKLIEEADAAKKAAIGTTDPAPAGTSAPPQPAKPR
Ga0306923_1227377413300031910SoilYYVAYKLIEEAETAKKAATAAAAREPTETGTSAPPPPAKPH
Ga0306921_1205806513300031912SoilVRYVRNIYKYYVAYKLIEEADAAKKAAIAGAKAQPAAGGALPQPVDSH
Ga0310916_1015493013300031942SoilYVRNIYKYYVAYKLIEEADAAKKAATAAAARGPTETGTSAPPPPANPH
Ga0310916_1113461513300031942SoilGREPVRYVRNIYKYYVAYKLIEEADAAKKAAIAAAPTEWIATGTSAPPQPAPR
Ga0310916_1137670413300031942SoilYYVAYKPIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQH
Ga0310916_1161401723300031942SoilYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPH
Ga0310913_1130426813300031945SoilYKYYVAYKLIEEADAAKKAAIPAAATQPVAAGTSAPPQPATPH
Ga0310910_1046046123300031946SoilPVQYVRNIYKYYVAYKLIEEADAAKKAAIAAAPTEPAAVGTSAPLQPAQPH
Ga0310910_1053994613300031946SoilKLIDEAEAAKKAATAAAAREPTETGTSAPPPPAKPH
Ga0310910_1148964213300031946SoilNIYKYYVAYKLIEEADAAKKAAIAAATTEPAAAGTSVPPQPANPH
Ga0310909_1074313813300031947SoilAYKLIEEADTAKKAAIAAGTTQPAAADTSAPPQPVKPH
Ga0310909_1110790213300031947SoilVRYVRNIYKYYVAYKLIEEADAAKKAATAAAAREPTETGTSAPPPPKPH
Ga0306926_1083854143300031954SoilRNIYKYYVAYKLIEDADVAKKAAIAAAATHPTAAGTSAPTQPTKAP
Ga0306926_1245986513300031954SoilKLIEEADAAKKAATAAAAREPTETGTSAPPPPAKPH
Ga0318531_1025459413300031981SoilVRYVRNIYKYYVAYKLIEEADAAKKAAIPAAATQPVAAGTSAPPQPATPH
Ga0306922_1172913623300032001SoilPVRYVRNIYKYYVAYKLIEEADAAKKAAIAEGTTQPAAAGTSTPPQPAQLH
Ga0306922_1220969523300032001SoilNIYKYYVAYKLIEEADAAKKAAIAAAPTESTATGSSAPPQPAPR
Ga0318507_1049899123300032025SoilYKYYVAYKLIEEADAAKKAAIGTTVPAAAGKSATPQPAKPH
Ga0318559_1002772823300032039SoilVRNIYIYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPPQPAKPH
Ga0318575_1063821923300032055SoilVRNIYKYYVAYKLIEEADAAKKAAIGTTEPVAAGTSTPPQPAEPH
Ga0318533_1081884623300032059SoilYKLIEEAEATKKAAIAGFTTQPVAAGTSAPLQPAKPH
Ga0318533_1139596023300032059SoilYKLIEEAEAAKKAATAAAAREPTETGTSAPPPPAKPH
Ga0306924_1132150523300032076SoilVGYQLIEEADAAKKAAIGAAPTEGAATGTSAPPQPAKAH
Ga0318518_1018497513300032090SoilVRNIYKYYVAYKLIEEADTAKKAAIGTTVPTAAGTSATPQPAKPH
Ga0318518_1024872113300032090SoilVRYVRNIYKYYVAYKLIEEAEAIKKAAIPAATTQPAAAGTSAPPQPA
Ga0318577_1064834113300032091SoilIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGTSAPLQPAKPH
Ga0306920_10308798513300032261SoilRNIYKYYVAYKLIEEADAAKKAAIAGATPQPAAAGTSAPPQPATPR
Ga0306920_10352226913300032261SoilYVAYKLIEEADAAKKAATAAAAREPTETGTSAPPPPKPH
Ga0310914_1074262133300033289SoilVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAK
Ga0310914_1107436213300033289SoilRYVRNIYKYYVAYKLIEEADAAKKAATAAVAREPTETGTSAPPPPAKPH
Ga0318519_1006115043300033290SoilYYVAYKLIEEAEATKKAAIAGATTQPAAAGTPAPPQPAKPR
Ga0318519_1081293513300033290SoilEPVRYVRNIYKYYVAYKLIEEAEATKKAAIAGATTQPVAAGNSAPPQPAKQH
Ga0318519_1085573023300033290SoilYYVAYKLIEGAEAAKKAAIAAAATEPSQTSPSVTQQPAKPP
Ga0318519_1106244633300033290SoilYKYYVAYKLIEEADTAKKAAIAAGTTQPAAADTSAPPQPVKPH


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