Metagenome Family F077935

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Overview

Basic Information
Family ID	F077935
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	42 residues
Representative Sequence	QKIALQIYLDKNMAQRAELMNYNPKTFDAAKGGLAKILEL
Number of Associated Samples	69
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.85 %
% of genes from short scaffolds (< 2000 bps)	0.85 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (57.265 % of family members)
Environment Ontology (ENVO)	Unclassified (87.179 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.744 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1DelMOSum2010_100360012 2DelMOSpr2010_100514141 3DelMOWin2010_100402392 4JGI24006J15134_100420721 5JGI24006J15134_101450702 6JGI24006J15134_101916232 7JGI24006J15134_102058451 8JGI24006J15134_102287581 9JGI24006J15134_102302402 10JGI24003J15210_100208112 11JGI24003J15210_100418371 12JGI24004J15324_100908791 13JGI24005J15628_100366951 14JGI24005J15628_100695173 15JGI24523J20078_10151972 16JGI24513J20088_10049081 17JGI24513J20088_10177902 18JGI24524J20080_10202791 19Ga0066224_10436922 20Ga0075466_10392791 21Ga0075466_10674291 22Ga0070754_100572512 23Ga0070754_100582141 24Ga0070750_101776292 25Ga0070746_100976731 26Ga0070748_10583111 27Ga0075468_100180111 28Ga0070745_12909482 29Ga0070752_10507212 30Ga0099847_10250852 31Ga0099847_10302021 32Ga0099847_10729151 33Ga0099847_10734351 34Ga0099848_10957021 35Ga0115566_103461541 36Ga0114918_100988271 37Ga0114918_103644832 38Ga0114994_101371531 39Ga0114994_102288981 40Ga0114998_100632892 41Ga0114997_101499011 42Ga0114997_102255881 43Ga0114997_106213011 44Ga0115546_12845051 45Ga0115003_102053371 46Ga0115004_100667671 47Ga0115004_103155642 48Ga0115000_103765731 49Ga0115000_103868582 50Ga0115001_101969641 51Ga0115001_103146772 52Ga0133547_107598342 53Ga0133547_107617282 54Ga0133547_107825001 55Ga0133547_109868251 56Ga0133547_114585202 57Ga0133547_115740921 58Ga0129327_100486531 59Ga0129327_101050222 60Ga0180120_100241011 61Ga0180120_103540142 62Ga0181385_10736262 63Ga0212024_10649982 64Ga0212021_10857202 65Ga0196887_10205592 66Ga0222632_10654941 67Ga0222691_10161322 68Ga0207905_10435632 69Ga0207896_10075781 70Ga0207896_10256331 71Ga0207896_10372332 72Ga0207896_10655752 73Ga0207896_10686911 74Ga0207890_10190681 75Ga0207890_10284881 76Ga0209535_10250551 77Ga0209535_10347721 78Ga0209535_10394621 79Ga0209535_11396062 80Ga0209336_100268001 81Ga0209336_100281392 82Ga0209634_10353132 83Ga0209634_10401812 84Ga0209634_10686092 85Ga0209634_10697791 86Ga0209634_11350211 87Ga0209337_10280994 88Ga0209337_10871242 89Ga0209337_12110052 90Ga0208032_10927462 91Ga0208814_10507182 92Ga0208303_10524021 93Ga0208134_10418021 94Ga0208162_11250643 95Ga0208767_10558792 96Ga0209832_10581751 97Ga0208645_10151481 98Ga0208645_10605152 99Ga0209308_103217101 100Ga0208544_103390522 101Ga0209384_10371122 102Ga0209709_100600661 103Ga0209709_101710991 104Ga0209709_101755081 105Ga0209830_101717782 106Ga0209830_104612481 107Ga0209091_102787002 108Ga0209090_102339702 109Ga0209090_105588462 110Ga0256368_10042251 111Ga0256368_10818182 112Ga0307488_105708561 113Ga0302126_102864802 114Ga0302121_101580811 115Ga0302118_104819521 116Ga0314858_022173_1296_1406 117Ga0348336_106407_2_127
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1DelMOSum2010_100360012 2DelMOSpr2010_100514141 3JGI24006J15134_100420721 4JGI24006J15134_101450702 5JGI24006J15134_101916232 6JGI24006J15134_102287581 7JGI24003J15210_100418371 8JGI24005J15628_100366951 9JGI24513J20088_10049081 10Ga0075466_10392791 11Ga0070750_101776292 12Ga0114918_100988271 13Ga0114997_102255881 14Ga0115003_102053371 15Ga0115000_103765731 16Ga0181385_10736262 17Ga0222632_10654941 18Ga0208032_10927462 19Ga0307488_105708561
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40 1Ga0099848_10957021 2JGI24003J15210_100208112 3JGI24004J15324_100908791 4Ga0070750_101776292 5Ga0115566_103461541 6Ga0114918_103644832 7Ga0114994_102288981 8Ga0115003_102053371 9Ga0115000_103868582 10Ga0115001_101969641 11Ga0133547_107617282 12Ga0196887_10205592 13Ga0222632_10654941 14Ga0207890_10190681 15Ga0209535_11396062 16Ga0209634_10401812 17Ga0208032_10927462 18Ga0208134_10418021 19Ga0209832_10581751 20Ga0307488_105708561 21Ga0302121_101580811
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.59% β-sheet: 0.00% Coil/Unstructured: 54.41%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300017764\|Ga0181385_1073626	Not Available	1053	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.29%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.71%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	29.91%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.56%
Oceanic	Environmental → Aquatic → Marine → Oceanic	60.68%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.42%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.71%
Strait	Environmental → Aquatic → Marine → Strait	0.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.71%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	58.97%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.91%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	22.22%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.71%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.71%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	57.27%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.56%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.85%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.85%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.42%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.85%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.71%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	2.56%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.85%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001718	Marine viral communities from the Pacific Ocean - LP-48	Environmental	Open in IMG/M
3300001720	Marine viral communities from the Pacific Ocean - LP-36	Environmental	Open in IMG/M
3300001853	Marine viral communities from the Subarctic Pacific Ocean - LP-49	Environmental	Open in IMG/M

Showing 1 to 10 of 69 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100360012	3300000101	Marine	KAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEL*
DelMOSpr2010_100514141	3300000116	Marine	QQKIALQIYLDKNMAQRAELMNYNPKTFDAAKGGRAGYSKGGLAKILEV*
DelMOWin2010_100402392	3300000117	Marine	TYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEL*
JGI24006J15134_100420721	3300001450	Marine	PREEAERIARLSSDEQKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGLAKILEI*
JGI24006J15134_101450702	3300001450	Marine	KLALQRYMDMDTAQRAELMNYNPKTFDAAKGGLAKILEL*
JGI24006J15134_101916232	3300001450	Marine	KYLDKDFSQRITLGDYNPKTFDAAQGGLAKILEV*
JGI24006J15134_102058451	3300001450	Marine	SDQQKLALQKYMDMDTAQRAELMNYNPKTFDAANGGLAKILEL*
JGI24006J15134_102287581	3300001450	Marine	QKAALQIYMDRNTAQGVQLMNYNPKKFDAAKGGLAKILEI*
JGI24006J15134_102302402	3300001450	Marine	PSDQQKLALQKYLDRDMAQGVELMNYNPKKFDAAKGGLAKILEV*
JGI24003J15210_100208112	3300001460	Marine	EQKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGRAGYAKGGLAKILEV*
JGI24003J15210_100418371	3300001460	Marine	IRISQLPSNQQKLELQKYLDRDLSQQITLSDYNPNKFDAAQGGLAKILEV*
JGI24004J15324_100908791	3300001472	Marine	QKLALQRYMDMDTAQRAELMNYNPKTFDAAKGGLAKILEL*
JGI24005J15628_100366951	3300001589	Marine	SDQQKIALQRYMDTDMAQRTELMNYEPRKFDAARGGLAKILEV*
JGI24005J15628_100695173	3300001589	Marine	PSDQQKLALQKYMDTDMAQRTELMNYSPKTFDAAKGGLAKILEL*
JGI24523J20078_10151972	3300001718	Marine	LQRYMDTDMAQRTELMNYEPRKFDAAKGGLAKILEL*
JGI24513J20088_10049081	3300001720	Marine	AALDIYLNRSNAQGVQLMNYNPKKFDAAKGGRAGYAKGGLAKILEV*
JGI24513J20088_10177902	3300001720	Marine	ALQIYMDRNTAQGVQLMNYNPKKFDAAKGGLAKILEI*
JGI24524J20080_10202791	3300001853	Marine	SDEQKAALDIYLNRDMAQGVQLMNYNPKKFDAAKGGLAKILEI*
Ga0066224_10436922	3300004457	Marine	ERIARLSSDEQKAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEV*
Ga0075466_10392791	3300006029	Aqueous	EEAERIARLSSDEQKAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEI*
Ga0075466_10674291	3300006029	Aqueous	QKAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEL*
Ga0070754_100572512	3300006810	Aqueous	KAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEI*
Ga0070754_100582141	3300006810	Aqueous	DQQKIALQIYLDKNMAQKAELMNYNPKTFDAAKGGLAKILEL*
Ga0070750_101776292	3300006916	Aqueous	QKYLDRDMAQRIALSDYKPKTFDAAKGGLAKILEL*
Ga0070746_100976731	3300006919	Aqueous	QQKIALQIYLDKNMAQKAELMNYNPKTFDAAKGGLAKILEL*
Ga0070748_10583111	3300006920	Aqueous	KLELQKYLDRDFSQRITLGDYNPKTFDAAKGGLAKILEL*
Ga0075468_100180111	3300007229	Aqueous	LELQKYLDRDFSQRITLGDYNPKTFDAAKGGLAKILEL*
Ga0070745_12909482	3300007344	Aqueous	RIARLSSDEQKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGLAKILEI*
Ga0070752_10507212	3300007345	Aqueous	SSDEQKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGLAKILEI*
Ga0099847_10250852	3300007540	Aqueous	ELQKYLDRDFSQRITLGDYNPKTFDAAKGGLAKILEL*
Ga0099847_10302021	3300007540	Aqueous	QQKAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEL*
Ga0099847_10729151	3300007540	Aqueous	KLELQKYLDRDLSQQITLSDYNPNKFDAAQGGLAKILEV*
Ga0099847_10734351	3300007540	Aqueous	PSDQQKLALQKYLDTDMAQRTELMNYSPKTFDAAKGGLAKILEL*
Ga0099848_10957021	3300007541	Aqueous	QKIALQIYLDKNMAQRAELMNYNPKTFDAAKGGLAKILEL*
Ga0115566_103461541	3300009071	Pelagic Marine	QLPSDQQKLELQKYLDKDFSQRIALTDYKPNKFDAAKGGLAKILEV*
Ga0114918_100988271	3300009149	Deep Subsurface	MAQKLELMKYSPKKFDAAKGGRAGYSKGGLAKILEL*
Ga0114918_103644832	3300009149	Deep Subsurface	LQEFMDMDMAQKLELIKYSPKKFDAAKGGRAGYSKGGLAKILEL*
Ga0114994_101371531	3300009420	Marine	EAERIARLSSDEQKAALDIYLNRSTAQGVQLMNYNPKKFDAAKGGLAKILEL*
Ga0114994_102288981	3300009420	Marine	SDQQKLALQKYLDRDMAQGVELMNYNPKKFDAAKGGLAKILEV*
Ga0114998_100632892	3300009422	Marine	AQKAELMNYSPKTFDAAKGGRAGYSKGGLAKILEL*
Ga0114997_101499011	3300009425	Marine	KNMAQRTELMNYSPKTFDAAKGGRAGYSKGGLAKILEL*
Ga0114997_102255881	3300009425	Marine	QKYLDTDMAQRTELMNYEPRKFDAAHGGLAKILEV*
Ga0114997_106213011	3300009425	Marine	RIARLSSDEQKAALQIYMDRSTAQGVQLMNYNPKKFDAAKGGLAKILEI*
Ga0115546_12845051	3300009435	Pelagic Marine	QQKIALQIYLDKNMAQRAELMNYNPKTFDAAKGGRAGYSKGGLAKILEL*
Ga0115003_102053371	3300009512	Marine	SLPSDQQKLALQPYLDRNMSQRAELMNYSPKTFDAAKGGLAKILEL*
Ga0115004_100667671	3300009526	Marine	QQKLALQKYMDTDMAQKAELMNYSPKTFDAAKGGRAGYSKGGLAKILEL*
Ga0115004_103155642	3300009526	Marine	DTDMAQKAELMNYSPKTFDAAKGGRAGYSKGGLAKILEL*
Ga0115000_103765731	3300009705	Marine	QLPSDQQKLALQKYMDTDMAQRTELMNYSPKTYDAAKGGRAGYSKGGLAKILEL*
Ga0115000_103868582	3300009705	Marine	ALQKYMDTDMAQRTELMNYSPKKFDAAKGGRAGYSRGGVAKILEL*
Ga0115001_101969641	3300009785	Marine	QKVALQIYLDKNMAQKLELMKYSPKKFDAAKGGRAGYSKGGLAKILEL*
Ga0115001_103146772	3300009785	Marine	QKYMDTDMAQKAELMNYSPKTFDAAKGGLAKILEL*
Ga0133547_107598342	3300010883	Marine	ALQKYMDTDMAQRTELMNYSPKTFDAAKGGLAKILEL*
Ga0133547_107617282	3300010883	Marine	QQKLALQKYLDTDLAQRTELMNYEPRKFDAAHGGLAKILEV*
Ga0133547_107825001	3300010883	Marine	LALQKYLDTDMAQRTELMNYEPRKFDAAHGGLAKILEV*
Ga0133547_109868251	3300010883	Marine	LALQKYMDTDMAQRTELMNYSPKTFDAAKGGLAKILEL*
Ga0133547_114585202	3300010883	Marine	DKNMAQRTELMNYSPKTFDAAKGGRAGYSKGGLAKILEL*
Ga0133547_115740921	3300010883	Marine	MAQRTELMNYSPKTFDAAKGGRAGYAKGGLAKILEL*
Ga0129327_100486531	3300013010	Freshwater To Marine Saline Gradient	QTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEI*
Ga0129327_101050222	3300013010	Freshwater To Marine Saline Gradient	IASLPSDQQKIALQIYLDKNMAQKAELMNYNPKTFDAAKGGLAKILEL*
Ga0180120_100241011	3300017697	Freshwater To Marine Saline Gradient	KLELQKYLDRDFSQRITLGDYNPKTFDAAKGGLAKILEL
Ga0180120_103540142	3300017697	Freshwater To Marine Saline Gradient	QQKIALQIYLDKNMAQKAELMNYNPKTFDAAKGGLAKILEL
Ga0181385_10736262	3300017764	Seawater	DQQKLELQKYLDKDFSQRIALTDYKPNKFDAAKGGLAKILEV
Ga0212024_10649982	3300022065	Aqueous	ASLPSDQQKIALQIYLDKNMAQRAELMNYNPKTFDAAKGGLAKILEL
Ga0212021_10857202	3300022068	Aqueous	LQIYLDKNMAQRAELMNYNPKTFDAAKGGLAKILEL
Ga0196887_10205592	3300022178	Aqueous	LSSDEQKAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEI
Ga0222632_10654941	3300022842	Saline Water	DQQKLALQEFMDINMAQKLELMKYSPKKFDAATGGLAKILEI
Ga0222691_10161322	3300022851	Saline Water	SDQQKLALQEFMDINMAQKLELMKYSPKKFDAAKGGRAGYSKGGLAKILEL
Ga0207905_10435632	3300025048	Marine	QKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0207896_10075781	3300025071	Marine	EAERIARLSSDEQKAALDIYLNRSTAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0207896_10256331	3300025071	Marine	KAALQIYMDRNTAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0207896_10372332	3300025071	Marine	ALQIYMDRSTAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0207896_10655752	3300025071	Marine	QKLALQKYMDTDMAQRAELMNYSPKTFDAAKGGLAKILEL
Ga0207896_10686911	3300025071	Marine	RIARLSSDEQKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGRAGYAKGGLAKILEV
Ga0207890_10190681	3300025079	Marine	QLPSDQQKIALQRYMDTDMAQRTELMNYEPRKFDAARGGLAKILEV
Ga0207890_10284881	3300025079	Marine	SDEQKAALQIYMDRNTAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0209535_10250551	3300025120	Marine	KAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0209535_10347721	3300025120	Marine	QQKIALQRYMDTDMAQRTELMNYEPRKFDAAKGGLAKILEL
Ga0209535_10394621	3300025120	Marine	ERIARLSSDEQKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0209535_11396062	3300025120	Marine	EAIRISQLPSNQQKLELQKYLDRDLSQQITLSDYNPNKFDAAKGGLAKILEV
Ga0209336_100268001	3300025137	Marine	QKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGRAGYAKGGLAKILEV
Ga0209336_100281392	3300025137	Marine	SDQQKVALQIYLDKNMAQRAELMNYNPKTFDAAKGGLAKILEL
Ga0209634_10353132	3300025138	Marine	EAIRISQLPSDQQKIALQRYMDTDMAQRTELMNYEPRKFDAARGGLAKILEV
Ga0209634_10401812	3300025138	Marine	ERIARLSSDEQKAALQIYMDRNTAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0209634_10686092	3300025138	Marine	QKLELQKYLDRDLSQQITLSDYNPNKFDAAQGGLAKILEV
Ga0209634_10697791	3300025138	Marine	ERIARLSSDEQKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGRAGYAKGGLAKILEV
Ga0209634_11350211	3300025138	Marine	QKYMDTDMAQRTELMNYSPKTFDAAKGGLAKILEL
Ga0209337_10280994	3300025168	Marine	QKIALQRYMDTDMAQRTELMNYEPRKFDAAKGGLAKILEL
Ga0209337_10871242	3300025168	Marine	QKYLDKDFSQRITLGDYNPKTFDAAQGGLAKILEV
Ga0209337_12110052	3300025168	Marine	QKYLDRDFSQRITLGDYNPKTFDAAKGGLAKILEL
Ga0208032_10927462	3300025266	Deep Ocean	QLPSSEQKAALDFYLNRSTAQQAELMNYNPKKFDAAKGGLAKILEV
Ga0208814_10507182	3300025276	Deep Ocean	SSEQKAALDFYLNRSTSQQAELMNYNPKKFDAAKGGLAKILGL
Ga0208303_10524021	3300025543	Aqueous	LELQKYLDRDFSQRITLGDYNPKTFDAAKGGLAKILEL
Ga0208134_10418021	3300025652	Aqueous	QKLELQKYLDRDFSQRITLGDYNPKTFDAAKGGLAKILEL
Ga0208162_11250643	3300025674	Aqueous	QIYLDKNMAQKAELMDYNPKTFDAAKGGLAKILEL
Ga0208767_10558792	3300025769	Aqueous	ARLSSDEQKAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEI
Ga0209832_10581751	3300025830	Pelagic Marine	ALQLALQRYMDMDTAQKTVLMNYNPKTFDAAKGGLAKILEL
Ga0208645_10151481	3300025853	Aqueous	DQQKIALQIYLDKNMAQKAELMNYNPKTFDAAKGGLAKILEL
Ga0208645_10605152	3300025853	Aqueous	KAALQTYLDRDLGQRFALSEYNPKKFDAAKGGLAKILEI
Ga0209308_103217101	3300025869	Pelagic Marine	LELQKYLDKDFSQRIALTDYKPNKFDAAKGGLAKILEV
Ga0208544_103390522	3300025887	Aqueous	QQKLELQKYLDRDFSQRITLGDYNPKTFDAAKGGLAKILEV
Ga0209384_10371122	3300027522	Marine	KAALDIYLNRSNAQGVELMNYSPKKFDAAKGGLAKILEI
Ga0209709_100600661	3300027779	Marine	NMAQRTELMNYSPKTFDAAKGGRAGYSKGGLAKILEL
Ga0209709_101710991	3300027779	Marine	DQQKLALQKYMDTDMAQRTELMNYSPKTFDAAKGGRAGYSKGGLAKILEL
Ga0209709_101755081	3300027779	Marine	QKYLDTDMAQRTELMNYEPRKFDAAHGGLAKILEV
Ga0209830_101717782	3300027791	Marine	DKNMAQRTELMNYSPKTFDAAKGGRAGYSKGGLAKILEL
Ga0209830_104612481	3300027791	Marine	AQKLELMNYSPKKFDAAKGGRAGYSKGGLAKILEL
Ga0209091_102787002	3300027801	Marine	DQQKLALQKYMDMDMAQRTELMNYEPRKFDAAHGGLAKILEV
Ga0209090_102339702	3300027813	Marine	DQQKIALQIYLDKNMAQRTELMNYSPKTFDAAKGGRAGYSKGGLAKILEL
Ga0209090_105588462	3300027813	Marine	SDEQKAALQIYMDRNTAQGVQLMNYNPKKFDAAKGGLAKILEL
Ga0256368_10042251	3300028125	Sea-Ice Brine	LDIYLNRSNAQGVQLMNYNPKKFDAAKGGLAKILEI
Ga0256368_10818182	3300028125	Sea-Ice Brine	KLALQKYMDMDTAQRAELMNYNPKTFDAAKGGLAKILEL
Ga0307488_105708561	3300031519	Sackhole Brine	LDTDMAQKMAQRAELMNYNPKTFDAAKGGLAKILEL
Ga0302126_102864802	3300031622	Marine	QIYLDKNMAQRTELMNYSPKTFDAAKGGRAGYAKGGLAKILEL
Ga0302121_101580811	3300031626	Marine	QKLALQKYMDTDMAQKAELMNYSPKTFDAAKGGLAKILEL
Ga0302118_104819521	3300031627	Marine	QKLALQKYLDRDMAQGVELMNYNPKKFDAAHGGLAKILEV
Ga0314858_022173_1296_1406	3300033742	Sea-Ice Brine	LQKYLDTDMAQRTELMNYEPRKFDAAHGGLAKILEV
Ga0348336_106407_2_127	3300034375	Aqueous	EQKAALDIYLNRSNAQGVQLMNYNPKKFDAAKGGLAKILEI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077935

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences