NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F077879

Metagenome / Metatranscriptome Family F077879

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077879
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 73 residues
Representative Sequence VLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD
Number of Associated Samples 99
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.62 %
% of genes near scaffold ends (potentially truncated) 25.64 %
% of genes from short scaffolds (< 2000 bps) 86.32 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (69.231 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(25.641 % of family members)
Environment Ontology (ENVO) Unclassified
(25.641 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.880 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.97%    β-sheet: 45.54%    Coil/Unstructured: 51.49%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.40.4.3: Single strand DNA-binding domain, SSBd1x3ea_1x3e0.76924
b.40.4.0: automated matchesd4dama14dam0.75686
b.40.4.0: automated matchesd2vw9a_2vw90.75574
b.40.4.0: automated matchesd2fxqa_2fxq0.75571
b.40.4.3: Single strand DNA-binding domain, SSBd5yuoa_5yuo0.75003


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF00877NLPC_P60 7.69
PF132794HBT_2 2.56
PF01546Peptidase_M20 2.56
PF13535ATP-grasp_4 1.71
PF00027cNMP_binding 0.85
PF12900Pyridox_ox_2 0.85
PF05977MFS_3 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0791Cell wall-associated hydrolase, NlpC_P60 familyCell wall/membrane/envelope biogenesis [M] 7.69
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.85


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.23 %
UnclassifiedrootN/A30.77 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001305|C688J14111_10006167All Organisms → cellular organisms → Bacteria3324Open in IMG/M
3300001686|C688J18823_10962298All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300002568|C688J35102_120979752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4667Open in IMG/M
3300003324|soilH2_10031125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1006Open in IMG/M
3300003994|Ga0055435_10004963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2225Open in IMG/M
3300003995|Ga0055438_10019629All Organisms → cellular organisms → Bacteria1516Open in IMG/M
3300003996|Ga0055467_10264713Not Available544Open in IMG/M
3300004081|Ga0063454_100006486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2791Open in IMG/M
3300004081|Ga0063454_100448063All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300004114|Ga0062593_103412138Not Available510Open in IMG/M
3300004156|Ga0062589_100451926All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300004156|Ga0062589_102222828Not Available562Open in IMG/M
3300004157|Ga0062590_100168464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1532Open in IMG/M
3300005184|Ga0066671_10053719All Organisms → cellular organisms → Bacteria2051Open in IMG/M
3300005218|Ga0068996_10002261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1970Open in IMG/M
3300005329|Ga0070683_100899181Not Available849Open in IMG/M
3300005332|Ga0066388_107756869Not Available538Open in IMG/M
3300005336|Ga0070680_100031941All Organisms → cellular organisms → Bacteria4234Open in IMG/M
3300005347|Ga0070668_100727830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium877Open in IMG/M
3300005365|Ga0070688_101201596Not Available609Open in IMG/M
3300005406|Ga0070703_10267518All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300005439|Ga0070711_100001030All Organisms → cellular organisms → Bacteria14823Open in IMG/M
3300005455|Ga0070663_101356275Not Available629Open in IMG/M
3300005455|Ga0070663_101544181Not Available591Open in IMG/M
3300005456|Ga0070678_100283545All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300005468|Ga0070707_100788154All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005549|Ga0070704_100162507All Organisms → cellular organisms → Bacteria1767Open in IMG/M
3300005564|Ga0070664_101742215Not Available591Open in IMG/M
3300005615|Ga0070702_100089810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1861Open in IMG/M
3300005615|Ga0070702_101214493All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300005719|Ga0068861_101486517Not Available664Open in IMG/M
3300005836|Ga0074470_10782154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2104Open in IMG/M
3300005836|Ga0074470_11178206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria12046Open in IMG/M
3300005985|Ga0081539_10088372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1608Open in IMG/M
3300006163|Ga0070715_10041762All Organisms → cellular organisms → Bacteria1924Open in IMG/M
3300006578|Ga0074059_11161594Not Available531Open in IMG/M
3300006579|Ga0074054_11294176All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300006954|Ga0079219_11898144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium562Open in IMG/M
3300009094|Ga0111539_12472544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium602Open in IMG/M
3300009098|Ga0105245_12578661Not Available562Open in IMG/M
3300009545|Ga0105237_12347424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300009553|Ga0105249_10551268Not Available1203Open in IMG/M
3300010044|Ga0126310_11408957Not Available568Open in IMG/M
3300010045|Ga0126311_10159391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1615Open in IMG/M
3300010358|Ga0126370_10621828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium936Open in IMG/M
3300010359|Ga0126376_12254695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium590Open in IMG/M
3300010366|Ga0126379_12737394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium590Open in IMG/M
3300010371|Ga0134125_10478383All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300010391|Ga0136847_10368695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2040Open in IMG/M
3300010397|Ga0134124_11910794Not Available629Open in IMG/M
3300010401|Ga0134121_11283923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium736Open in IMG/M
3300012212|Ga0150985_107516558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1633Open in IMG/M
3300012469|Ga0150984_106583515All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300012908|Ga0157286_10095222All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300012908|Ga0157286_10223987Not Available648Open in IMG/M
3300012915|Ga0157302_10052115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1161Open in IMG/M
3300012951|Ga0164300_10228215All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300012951|Ga0164300_11138477Not Available513Open in IMG/M
3300012957|Ga0164303_10139590All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300012958|Ga0164299_10594384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium755Open in IMG/M
3300012958|Ga0164299_11635089Not Available509Open in IMG/M
3300012984|Ga0164309_10662520All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300012984|Ga0164309_11781665Not Available528Open in IMG/M
3300012985|Ga0164308_10060972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2491Open in IMG/M
3300012986|Ga0164304_10189909All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300012986|Ga0164304_11307174Not Available591Open in IMG/M
3300012988|Ga0164306_10864896Not Available734Open in IMG/M
3300013306|Ga0163162_11105070Not Available898Open in IMG/M
3300014269|Ga0075302_1061949Not Available776Open in IMG/M
3300014299|Ga0075303_1028549All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300014326|Ga0157380_10151845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2003Open in IMG/M
3300015371|Ga0132258_11926814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1488Open in IMG/M
3300015371|Ga0132258_12449914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1306Open in IMG/M
3300015373|Ga0132257_100482473All Organisms → cellular organisms → Bacteria1518Open in IMG/M
3300015373|Ga0132257_100593541All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300018431|Ga0066655_10499340Not Available806Open in IMG/M
3300018433|Ga0066667_10749377Not Available824Open in IMG/M
3300018466|Ga0190268_10028336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1946Open in IMG/M
3300019356|Ga0173481_10036574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1613Open in IMG/M
3300019356|Ga0173481_10543484Not Available600Open in IMG/M
3300025538|Ga0210132_1010449Not Available1243Open in IMG/M
3300025905|Ga0207685_10067051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium1442Open in IMG/M
3300025905|Ga0207685_10747993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium535Open in IMG/M
3300025915|Ga0207693_10474578All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300025917|Ga0207660_10494675All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300025930|Ga0207701_10542381Not Available993Open in IMG/M
3300025945|Ga0207679_10680051Not Available933Open in IMG/M
3300026118|Ga0207675_101544054All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300026121|Ga0207683_10640986All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300026121|Ga0207683_10680242All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300028381|Ga0268264_10272568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1581Open in IMG/M
3300028708|Ga0307295_10043248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1151Open in IMG/M
3300028720|Ga0307317_10227710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium630Open in IMG/M
3300028768|Ga0307280_10093872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium990Open in IMG/M
3300028771|Ga0307320_10232438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium725Open in IMG/M
3300028782|Ga0307306_10043644All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300028802|Ga0307503_10004684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3565Open in IMG/M
3300028802|Ga0307503_10228734All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300028875|Ga0307289_10086125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1276Open in IMG/M
3300031152|Ga0307501_10079407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium793Open in IMG/M
3300031184|Ga0307499_10176995Not Available642Open in IMG/M
3300031366|Ga0307506_10102679Not Available940Open in IMG/M
3300031366|Ga0307506_10257340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium666Open in IMG/M
3300031716|Ga0310813_10961424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium777Open in IMG/M
3300031720|Ga0307469_11142642Not Available734Open in IMG/M
3300031740|Ga0307468_100309607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1152Open in IMG/M
3300031854|Ga0310904_10052742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2038Open in IMG/M
3300031938|Ga0308175_100770267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium1050Open in IMG/M
3300031949|Ga0214473_10022368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7400Open in IMG/M
3300032018|Ga0315272_10218326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium912Open in IMG/M
3300032174|Ga0307470_11319022Not Available592Open in IMG/M
3300032174|Ga0307470_11530379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium556Open in IMG/M
3300032180|Ga0307471_100570294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium1288Open in IMG/M
3300032205|Ga0307472_101258557Not Available710Open in IMG/M
3300032256|Ga0315271_10719302Not Available858Open in IMG/M
3300032342|Ga0315286_10096353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3166Open in IMG/M
3300034115|Ga0364945_0211436Not Available593Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil25.64%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.55%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.13%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.42%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.42%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.56%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.56%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.71%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.71%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.71%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.85%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.85%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.85%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005218Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014269Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1EnvironmentalOpen in IMG/M
3300014299Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300025538Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J14111_1000616743300001305SoilLSTGYAHGVLGERTAVVAEVHPYEVHGSPHVTVALAFADGTFAQAQLGAESVPDGLQPGDAVVVRMAMSVVVALERRPPSPPDA*
C688J18823_1096229823300001686SoilVLGERTAVVASVQPYEVHGSRHVTVALAFADGTFAXAQLGAESVPEGLQQGDPVLVKYAMSVVIAVERSPTPSD*
C688J35102_12097975253300002568SoilLRTGYAHGVLGERTAVVADVQPYEVHGARHVTVALAFPDGTFTQAQLGEESVPEGLRPGDPVVVRFAMSVVVAVERPPAPSD*
soilH2_1003112523300003324Sugarcane Root And Bulk SoilVLGERRAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPDGLQPGDPVVVKLAMSVVIGLERPPAEGGA*
Ga0055435_1000496323300003994Natural And Restored WetlandsMLGARDAVVAEVQRYEIHGSAHVRVALAFPDRTFAQAQLGAESVPADIEPGDRVVVRSAMNVVVAIERPAG*
Ga0055438_1001962933300003995Natural And Restored WetlandsFEAMLGARDAVVAEVQRYEIHGSAHVRVALAFPDRTFAQAQLGAESVPADIEPGDRVVVRSAMNVVVAIERPAG*
Ga0055467_1026471313300003996Natural And Restored WetlandsMAMLGTKDAVVAEVRAYEIHGSPYVEVALAFADRTFAKAQLGAESVPADIQQGDPVVVRYAMNVVVALERPAG*
Ga0063454_10000648633300004081SoilLSTGYAHGVLGERTAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPEGLQPGDPVVVKLAMSVVIGLERPPAS*
Ga0063454_10044806323300004081SoilVLGERTAVVASVQPYEVHGSRHVTVALAFADGTFAKAQLGAESVPEGLQQGDPVLVKYAMSVVIAVERSPTPSD*
Ga0062593_10341213823300004114SoilGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPEGLRPGDPVIVRTAMNVVVALERAAS*
Ga0062589_10045192623300004156SoilVLGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPEGLRPGDPVIVRTAMNVVVALERAAS*
Ga0062589_10222282813300004156SoilVLGERIATVAELEPYEVHGSRHVRVALAFPDRTFMQAQLGAESVPEGLAPGDPVIVRLAMNVVVALERPGS*
Ga0062590_10016846423300004157SoilMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVIGIERPATGA*
Ga0066671_1005371933300005184SoilVLGERTAVVAGVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQQGEPVLVKYAMSVVIALERSPTPSD*
Ga0068996_1000226123300005218Natural And Restored WetlandsMLGARDAVVAEVHRYEIHGSPYVTVALAFPDRTFAQAQLGAESVPADIEPGDRVVVRSAMNVVVALERPAD*
Ga0070683_10089918123300005329Corn RhizosphereLSTGYAHGVLGERTAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPEGLEPGDTVVVRYAMSVVIAVERPPA*
Ga0066388_10775686913300005332Tropical Forest SoilLSTGYAHGVLGERTAVVAEVQPYEVHGSRHVTVALAFADGTFTQAQLGAESVPEGLQPGDPVVVRMAMSVVVALER
Ga0070680_10003194143300005336Corn RhizosphereVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVALERVAN*
Ga0070668_10072783023300005347Switchgrass RhizosphereMLGERDAVVAEVRLYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIERSAPST*
Ga0070688_10120159613300005365Switchgrass RhizosphereGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVALERVAN*
Ga0070703_1026751813300005406Corn, Switchgrass And Miscanthus RhizosphereVSGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVV
Ga0070711_100001030133300005439Corn, Switchgrass And Miscanthus RhizosphereLSTGYAHGVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAKAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD*
Ga0070663_10135627523300005455Corn RhizosphereMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIERSAPST*
Ga0070663_10154418123300005455Corn RhizosphereVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVALERAAN*
Ga0070678_10028354523300005456Miscanthus RhizosphereVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVSLERVAN*
Ga0070707_10078815413300005468Corn, Switchgrass And Miscanthus RhizosphereVFGERIATVAELEPYEVHGSRHVRVVLAFADQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVALERVAN*
Ga0070704_10016250743300005549Corn, Switchgrass And Miscanthus RhizosphereVSGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVALERVAN*
Ga0070664_10174221513300005564Corn RhizosphereMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVIGIERPA
Ga0070702_10008981033300005615Corn, Switchgrass And Miscanthus RhizosphereLSTGYAHGVLGERTAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPEGLEPGDPVVVRYAMSVVIA
Ga0070702_10121449313300005615Corn, Switchgrass And Miscanthus RhizosphereVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAM
Ga0068861_10148651723300005719Switchgrass RhizosphereMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIE
Ga0074470_1078215413300005836Sediment (Intertidal)MLGEREAVVAEVQPYDVHGSPHVKVALAFADRTFQQVQLGAESVPADLRVGEAVLVRLAMNVVVAIERRADPA*
Ga0074470_1117820633300005836Sediment (Intertidal)VLGERDAVVADVQPYDVHGSPHVKVALAFADHTFQQVQLGAESVPGDLRAGEPVLVRFAMNVVVAIERPPDTP*
Ga0081539_1008837223300005985Tabebuia Heterophylla RhizosphereVLGERTATVAELEPYEVHGSRHVRVVLAFPDRTFMQAQLGAESVPDGLEQGDPVVVRLAMNVVVALERPAS*
Ga0070715_1004176223300006163Corn, Switchgrass And Miscanthus RhizosphereLSTGYAHGVLGERSAVVANVQPYEVHGSRHVTVALAFEDGTFAQAQLGAESVPEGLQPGDPVLVKYAMSVVVALERPPPSD*
Ga0074059_1116159413300006578SoilLSTGYAHGVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIER
Ga0074054_1129417613300006579SoilLSTGYAHGVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD*
Ga0079219_1189814423300006954Agricultural SoilHGVLGERTAVVAEVQPYEVHGSRHVTVALAFADGTFMQAQLGAESVPDDLRPGDPVVVKLAMSVVVSLERPASAD*
Ga0111539_1247254413300009094Populus RhizosphereTAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPEGLEPGDPVVVRYAMSVVIAVERPPA*
Ga0105245_1257866123300009098Miscanthus RhizosphereMLGERNAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVIGIERPATGA*
Ga0105237_1234742413300009545Corn RhizosphereVLGERTAVVAEVQPYEVHGSRHVTVALAFPDGTFAQAQLGAESVPEGLQPGDPVVVRFAMSVVIAVERPPAEPAS*
Ga0105249_1055126813300009553Switchgrass RhizosphereVVAEVRLYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIERSAPST*
Ga0126310_1140895723300010044Serpentine SoilMLGTRNAVVAQVRRYEIHGSPYVEVALAFEDRTFATAQLGAESVPDGMKPGDRVVVRSAMNVVVALERPAG*
Ga0126311_1015939133300010045Serpentine SoilMAMLGTRNAVVAQVRRYEIHGSPYVEVALAFEDRTFATAQLGAESVPDGIEPGDRVVVRSAMNVVVALERPAG*
Ga0126370_1062182823300010358Tropical Forest SoilVLGERTAVVADVQPYEVHGSRHVTVALAFPDGTFSQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTTD*
Ga0126376_1225469513300010359Tropical Forest SoilPSAATEPSLSTGYAHGVLGERTAVVADVQPYEVHGSRHVTVALAFPDGTFSQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTTD*
Ga0126379_1273739413300010366Tropical Forest SoilHGVLGERTAVVASVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTSE*
Ga0134125_1047838313300010371Terrestrial SoilAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVALERVAN*
Ga0136847_1036869523300010391Freshwater SedimentMLGERDAVVADVQPYDVHGSPHVKVALAFADHTFQQVQLGAESVPADLRAGEPVLVRFAMNVVVAIERRAEA*
Ga0134124_1191079423300010397Terrestrial SoilVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTDQPADS*
Ga0134121_1128392323300010401Terrestrial SoilVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVV
Ga0150985_10751655823300012212Avena Fatua RhizosphereVLGERTAVVAEVHPYEVHGSPHVTVALAFADGTFAQAQLGAESVPDGLQPGDAVVVRMAMSVVVALERRPPSPPDA*
Ga0150984_10658351523300012469Avena Fatua RhizosphereERTAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPEGLQPGDPVVVKLAMSVVIGLERPPAS*
Ga0157286_1009522223300012908SoilMLGERDAVVAEVRPYDVHGSPHVQVVLAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVIGIERPATGA*
Ga0157286_1022398723300012908SoilLGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPEGLRPGDPVIVRTAMNVVVALERAAS*
Ga0157302_1005211513300012915SoilVLGERTAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPEGLQAGDPVVVKLAMSV
Ga0164300_1022821513300012951SoilVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAEIVPDGLRPGDPVIVRTAMNVVVALERVAN*
Ga0164300_1113847713300012951SoilLAERTAVVADVQPYEVHGSRHMTVALAFADGTFAQAQLGAESVPEGLAPGDPVVVKFAMSVVVALERPPASDPA*
Ga0164303_1013959033300012957SoilVLGERSAVVADVQPYEVHGSPHVTVALAFPDGTFAKAQLGAESVPEGIQPGDPVLVRYAMNVVVALERPPTSD*
Ga0164299_1059438413300012958SoilVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAKAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD*
Ga0164299_1163508913300012958SoilVLGERTAVVAEVQPYEVHGSRHVKVALAFPDGTFAQAQLGAESVPEGLEPGDPVVVRCAMSVVIAVERPPA*
Ga0164309_1066252023300012984SoilPSAATEPGLSTGYAHGVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD*
Ga0164309_1178166523300012984SoilVLGERTAVVAEVQPYEVHGSRHVKVALAFPDGTFAQAQLGAESVPEGLEPGDPVVVRFAMSVVIAVERPPA*
Ga0164308_1006097233300012985SoilVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAKAQLGAESVPEGLQPGDPVLVRYAMSVVIAIERPPTAD*
Ga0164304_1018990923300012986SoilLAERTAVVADVQPYEVHGSRHMTVALAFADGTFAQAQLGADSVPEGLAPGDPVVVKFAMSVVVALERPPASDPA*
Ga0164304_1130717423300012986SoilMEPGLSTGYAHGVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD*
Ga0164306_1086489623300012988SoilVLGERTAVVADVQPYEVHGSPHVTVALAFPDGTFAQAQLGAESVPEGIQPGDPVLVRYAMNVVVALERPPTSD*
Ga0163162_1110507013300013306Switchgrass RhizosphereLHAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIERSAPST*
Ga0075302_106194923300014269Natural And Restored WetlandsMLGEREAVVAEVQAYDVPGSPHVKIALAFADRTFQQVQLGAESVPADLRVGEAVLVRLAMNVVVAIERRAEPA*
Ga0075303_102854923300014299Natural And Restored WetlandsMLGEREAVVAEVQAYDVHGSPHVKIALAFADRTFQQVQLGAESVPADLRVGEAVLVRLAMNVVVAIERRAEPA*
Ga0157380_1015184523300014326Switchgrass RhizosphereVFGERLATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVSLERVAN*
Ga0132258_1192681423300015371Arabidopsis RhizosphereVLGERTAVVAQVQPYEVHGSRHVKVALAFPDGTFAQAQLGAESVPEGLEPGDPVVVRFAMSVVIAVERPPA*
Ga0132258_1244991423300015371Arabidopsis RhizosphereVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD*
Ga0132257_10048247333300015373Arabidopsis RhizosphereMLGTREAVGAEGRPYEIHGAPHVQVALAFPDRTFATAQLGAESVPPGIEAGDPVLVRYAMNVVVALERPETDTG*
Ga0132257_10059354123300015373Arabidopsis RhizosphereVLGERTAVVADVHPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD*
Ga0066655_1049934023300018431Grasslands SoilVLGERTAVVAGVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQQGEPVLVKYAMSVVIALERSPTPSD
Ga0066667_1074937723300018433Grasslands SoilLSTGYAHGVLGERTAVVAEVQPYEVHGSRHVTVVLAFADGTFTQAQLGAESVPEALEPGDPVLVRYAMSVVVALERPATPG
Ga0190268_1002833623300018466SoilVLGERTATVAELEPYDVHGSRHVRVVLAFPDQTFLQAQLGAESVPDELHPGDPVIVRMAMNVVVGLERPAS
Ga0173481_1003657433300019356SoilMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVIGIERPATGA
Ga0173481_1054348423300019356SoilVLGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPEGLRPGDPVIVRTAMNVVVALERAAS
Ga0210132_101044923300025538Natural And Restored WetlandsMLGARDAVVAEVQRYEIHGSAHVRVALAFPDRTFAQAQLGAESVPADIEPGDRVVVRSAMNVVVAIERPAG
Ga0207685_1006705123300025905Corn, Switchgrass And Miscanthus RhizosphereLSTGYAHGVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAKAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD
Ga0207685_1074799323300025905Corn, Switchgrass And Miscanthus RhizosphereATEPSLSTGYAHGVLGERSAVVANVQPYEVHGSRHVTVALAFEDGTFAQAQLGAESVPEGLQPGDPVLVKYAMSVVVALERPPLSD
Ga0207693_1047457823300025915Corn, Switchgrass And Miscanthus RhizosphereAHGVLGERSAVVANVQPYEVHGSRHVTVALAFEDGTFAQAQLGAESVPEGLQPGDPVLVKYAMSVVVALERPPPSD
Ga0207660_1049467523300025917Corn RhizosphereVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVALERVAN
Ga0207701_1054238113300025930Corn, Switchgrass And Miscanthus RhizosphereMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLALNVVVGIERSAPST
Ga0207679_1068005123300025945Corn RhizosphereMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIERSAPST
Ga0207675_10154405413300026118Switchgrass RhizosphereMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVV
Ga0207683_1064098613300026121Miscanthus RhizosphereVVPSAATEPGLSTGYAHGVLGERTAVVADVQPYEVHGSRHVTVALAFADGTFAQAQLGAESVPEGLQPGDPVLVRYAMSVVVAIERPPTAD
Ga0207683_1068024223300026121Miscanthus RhizosphereVFGERIATVAELEPYEVHGSRHVRVVLAFPDQSFEQAQLGAESVPDGLRPGDPVIVRTAMNVVVALERAAN
Ga0268264_1027256813300028381Switchgrass RhizosphereLSTGYAHGVLGERTAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPEGLEPGDPVVVRYAMSV
Ga0307295_1004324823300028708SoilMLGERDAVVAEVRPYDVHGSPHIQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIERSAGPS
Ga0307317_1022771013300028720SoilVLAERTAVVADVQPYEVHGSRHMTVALAFADGTFAQAQLGAESVPEGLAPGDPVVVKLAMSVVVALERPPASDPA
Ga0307280_1009387223300028768SoilVLAERTAVVADVQPYEVHGSRHMKVALAFADGTFAQAQLGAESVPEGLQQGDPVVVKLAMSVVVALERPPAPETT
Ga0307320_1023243823300028771SoilMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAM
Ga0307306_1004364423300028782SoilLSTGYAHGVLAERTAVVAEVQPYEVHGSRHVTVALAFPDGTFTQAQLGAESVPEGLRPGDPVVVKLAMSVVVGLERPPEPSSG
Ga0307503_1000468423300028802SoilMLGERDAVVAEVRPYDVHGSPHVQVALAFADHTFQQAQLGAESVPADLHAGDAVVVRLAMNVVIGIERPAATP
Ga0307503_1022873423300028802SoilMLGERDAVVAEVRPYDVHGSPHVQVALAYADKTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIERPAAGP
Ga0307289_1008612523300028875SoilVVADVQPYEVHGSRHMKVALAFADGTFAQAQLGAESVPEGLQQGDPVVVKLAMSVVVALERPPAPETT
Ga0307501_1007940713300031152SoilMLGERDAVVAEVRPYDVHGSPHVQVALAYADQTFQQAQLGAESVPADLRPGDAVVVRLAMNVVIGIERPAAGP
Ga0307499_1017699523300031184SoilMLGERDAVVAEVRPYDVHGSPHVQVALAFADKTFQQVQLGAESVPPDLRPGDAVVVRLAMNVVVGIERPAASP
Ga0307506_1010267923300031366SoilMLGERDAVVAEVRAYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDPVVVRLAMNVVVGIERPAAGTS
Ga0307506_1025734013300031366SoilVLAERTAVVADVQPYEVHGSRHMTVALAFADGTFAQAQLGAESVPEGLRAGDAVIVKLAMSVVVALERPPAPAAP
Ga0310813_1096142423300031716SoilLSTGYAHGVLGERTAVVAEVQPYEVHGSRHVTIALAFPDGTFTQAQLGAESVPEGLEPGDPVVVRFAMSVVIAVERPPA
Ga0307469_1114264223300031720Hardwood Forest SoilVVADVQPYEVHGSRHMKVALAFADGTFAQAQLGAESVPEGLRQGDPVVVKLAMSVVVALERPPTPETT
Ga0307468_10030960723300031740Hardwood Forest SoilVVADVQPYEVHGSRHMKVALAFADGTFAQAQLGAESVPEGLRQGDPVVVKLAMSVVVALERPPTSETT
Ga0310904_1005274223300031854SoilMLGERDAVVAEVRPYDVHGSPHVQVALAFADQTFQQVQLGAESVPADLRPGDAVVVRLAMNVVVGIERPAPSA
Ga0308175_10077026723300031938SoilLSTRYAHGVLGERTAVVAEVQPYEVHGSRHVTVALAFSDGTFMQAQLGAESVPDGLQPGDRVVVKLAMSVVIALERPPTSD
Ga0214473_1002236873300031949SoilMLGTRDAVVAEIRHYEIHGSPYVEVTLAFADRTFTKAQLGAESVPAGIEPGDLVVVRSAMNVVVALERPAG
Ga0315272_1021832613300032018SedimentVVLGERDAVVAEVQPYEIHGSPHVKVALAFADHTFLAAQLGTESIPQDLRAGEPVVVRFAMSVVVAIE
Ga0307470_1131902223300032174Hardwood Forest SoilVLAERTAVVADVQPYEVHGSRHMTVALAFADGTFAQAQLGAESVPEGLAPGDPVVVKFAMSVVVALERPPASDPA
Ga0307470_1153037923300032174Hardwood Forest SoilAVVADVQPYEVHGSRHMKVALAFADGTFAQAQLGAESVPEGLRRGDPVVVKLAMSVVVALERPPAPETT
Ga0307471_10057029423300032180Hardwood Forest SoilVLAERTAVVADVQPYEVHGSRHMKVALAFADGTFAQAQLGAESVPEGLRQGDPVVVKLAMSVVVALERPPTSETT
Ga0307472_10125855723300032205Hardwood Forest SoilVLAERTAVVADVQPYEVHGSRHMTVALAFADGTFAQAQLGAESVPDGLAPGDPVVVKFAMSVVVALERPPVSDPA
Ga0315271_1071930223300032256SedimentMLGQRDAVVAEVQLYDVHGSPHVKVVLAFADRTFEQVQLGAESVPGDLHAGEPVLVRLAMNVVVAIERRAEA
Ga0315286_1009635323300032342SedimentMLGRRDAVVAEVQLYDVHGSPHVKVVLAFADRTFEQVQLGAESVPGDLHAGEPVLVRLAMNVVVAIERRAEA
Ga0364945_0211436_67_2883300034115SedimentMLGERDAVVAEVRPYDVHGSPHVQVALAFADHTFQQAQLGAESVPADLRPGDAVVVRLAMNVVIGIERPAADP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.