Metagenome Family F077874

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077874
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	87 residues
Representative Sequence	MSAALSFEPDEPPGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAIVLGAVAGEDGEGLAGLSDDQLI
Number of Associated Samples	100
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.15 %
% of genes near scaffold ends (potentially truncated)	94.87 %
% of genes from short scaffolds (< 2000 bps)	93.16 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.829 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.897 % of family members)
Environment Ontology (ENVO)	Unclassified (41.880 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.47% β-sheet: 0.00% Coil/Unstructured: 80.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00254	FKBP_C	11.97
PF08031	BBE	10.26
PF00903	Glyoxalase	6.84
PF04909	Amidohydro_2	3.42
PF07992	Pyr_redox_2	2.56
PF02720	DUF222	2.56
PF02426	MIase	1.71
PF00501	AMP-binding	1.71
PF13193	AMP-binding_C	0.85
PF00291	PALP	0.85
PF00246	Peptidase_M14	0.85
PF11716	MDMPI_N	0.85
PF01565	FAD_binding_4	0.85
PF09983	DUF2220	0.85
PF00266	Aminotran_5	0.85
PF09084	NMT1	0.85
PF02560	Cyanate_lyase	0.85
PF07859	Abhydrolase_3	0.85
PF00850	Hist_deacetyl	0.85
PF01614	IclR	0.85
PF00196	GerE	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	10.26
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.71
COG4829	Muconolactone delta-isomerase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.71
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.85
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.85
COG1513	Cyanate lyase	Inorganic ion transport and metabolism [P]	0.85
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
All Organisms	root	All Organisms	40.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
cellular organisms	root	All Organisms → cellular organisms	40.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.27 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.56 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.71 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4.27 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.56 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.71 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.85 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
Marmoricola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola	4.27 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.71 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.71 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.85 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.85 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.83 %
Marmoricola mangrovicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	4.27 %
Geodermatophilus aquaeductus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus aquaeductus	1.71 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.71 %
Nakamurella leprariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella leprariae	0.85 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	0.85 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10429697	Not Available	539	Open in IMG/M
3300004081\|Ga0063454_100077552	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300004153\|Ga0063455_100113916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1150	Open in IMG/M
3300005329\|Ga0070683_101715731	Not Available	604	Open in IMG/M
3300005332\|Ga0066388_104114554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus aquaeductus	742	Open in IMG/M
3300005332\|Ga0066388_105129804	Not Available	665	Open in IMG/M
3300005457\|Ga0070662_101926215	Not Available	511	Open in IMG/M
3300005539\|Ga0068853_101436342	Not Available	668	Open in IMG/M
3300005541\|Ga0070733_11059792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	544	Open in IMG/M
3300005566\|Ga0066693_10268387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300005616\|Ga0068852_100660505	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300005764\|Ga0066903_100948314	Not Available	1565	Open in IMG/M
3300006163\|Ga0070715_10100808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1346	Open in IMG/M
3300006175\|Ga0070712_100572729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	953	Open in IMG/M
3300006854\|Ga0075425_103035504	Not Available	513	Open in IMG/M
3300006871\|Ga0075434_101254192	Not Available	753	Open in IMG/M
3300006954\|Ga0079219_11289717	Not Available	642	Open in IMG/M
3300009090\|Ga0099827_10158728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1856	Open in IMG/M
3300009551\|Ga0105238_12904825	Not Available	515	Open in IMG/M
3300010043\|Ga0126380_12296860	Not Available	501	Open in IMG/M
3300010359\|Ga0126376_13020465	Not Available	520	Open in IMG/M
3300010396\|Ga0134126_12256062	Not Available	593	Open in IMG/M
3300010403\|Ga0134123_11323514	Not Available	757	Open in IMG/M
3300012209\|Ga0137379_10640081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	970	Open in IMG/M
3300012349\|Ga0137387_11058929	Not Available	579	Open in IMG/M
3300012353\|Ga0137367_10079470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2426	Open in IMG/M
3300012354\|Ga0137366_10420204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	972	Open in IMG/M
3300012507\|Ga0157342_1021700	All Organisms → cellular organisms → Bacteria → Terrabacteria group	751	Open in IMG/M
3300012929\|Ga0137404_10330060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella leprariae	1330	Open in IMG/M
3300012929\|Ga0137404_11150280	Not Available	713	Open in IMG/M
3300012930\|Ga0137407_11703043	Not Available	601	Open in IMG/M
3300013296\|Ga0157374_11100469	Not Available	815	Open in IMG/M
3300013306\|Ga0163162_11569365	Not Available	750	Open in IMG/M
3300013306\|Ga0163162_13426655	Not Available	506	Open in IMG/M
3300014497\|Ga0182008_10306909	All Organisms → cellular organisms → Bacteria → Terrabacteria group	832	Open in IMG/M
3300016294\|Ga0182041_10617591	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300016341\|Ga0182035_10120658	Not Available	1961	Open in IMG/M
3300016357\|Ga0182032_10611693	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300016371\|Ga0182034_10209807	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300016371\|Ga0182034_11856190	Not Available	531	Open in IMG/M
3300016404\|Ga0182037_10592702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	940	Open in IMG/M
3300018046\|Ga0187851_10146746	Not Available	1430	Open in IMG/M
3300018060\|Ga0187765_10280174	Not Available	993	Open in IMG/M
3300018086\|Ga0187769_10630853	All Organisms → cellular organisms → Bacteria → Terrabacteria group	810	Open in IMG/M
3300021388\|Ga0213875_10415339	Not Available	642	Open in IMG/M
3300021475\|Ga0210392_10413926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	984	Open in IMG/M
3300021478\|Ga0210402_10629026	Not Available	994	Open in IMG/M
3300021560\|Ga0126371_11518100	Not Available	798	Open in IMG/M
3300021560\|Ga0126371_11683704	Not Available	758	Open in IMG/M
3300024288\|Ga0179589_10114831	Not Available	1116	Open in IMG/M
3300025509\|Ga0208848_1115385	Not Available	532	Open in IMG/M
3300025904\|Ga0207647_10569201	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300025915\|Ga0207693_11059396	Not Available	617	Open in IMG/M
3300025929\|Ga0207664_11372227	Not Available	627	Open in IMG/M
3300025937\|Ga0207669_10941032	Not Available	724	Open in IMG/M
3300026142\|Ga0207698_11748054	Not Available	637	Open in IMG/M
3300027725\|Ga0209178_1289843	Not Available	600	Open in IMG/M
3300027725\|Ga0209178_1389539	Not Available	528	Open in IMG/M
3300027765\|Ga0209073_10255360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	683	Open in IMG/M
3300027775\|Ga0209177_10185821	Not Available	730	Open in IMG/M
3300031544\|Ga0318534_10751845	Not Available	549	Open in IMG/M
3300031545\|Ga0318541_10442270	Not Available	727	Open in IMG/M
3300031564\|Ga0318573_10340309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300031572\|Ga0318515_10766633	Not Available	509	Open in IMG/M
3300031640\|Ga0318555_10611972	Not Available	590	Open in IMG/M
3300031680\|Ga0318574_10216387	Not Available	1103	Open in IMG/M
3300031713\|Ga0318496_10009081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4627	Open in IMG/M
3300031713\|Ga0318496_10202189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1092	Open in IMG/M
3300031713\|Ga0318496_10578884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus aquaeductus	620	Open in IMG/M
3300031723\|Ga0318493_10032188	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300031764\|Ga0318535_10390033	Not Available	622	Open in IMG/M
3300031765\|Ga0318554_10240167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	1032	Open in IMG/M
3300031768\|Ga0318509_10546932	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300031770\|Ga0318521_10941288	Not Available	529	Open in IMG/M
3300031771\|Ga0318546_10220005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1301	Open in IMG/M
3300031771\|Ga0318546_11005022	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031781\|Ga0318547_10784764	Not Available	593	Open in IMG/M
3300031782\|Ga0318552_10472459	Not Available	640	Open in IMG/M
3300031782\|Ga0318552_10491871	Not Available	626	Open in IMG/M
3300031782\|Ga0318552_10585182	Not Available	570	Open in IMG/M
3300031796\|Ga0318576_10555225	Not Available	541	Open in IMG/M
3300031819\|Ga0318568_10572221	Not Available	704	Open in IMG/M
3300031821\|Ga0318567_10057824	Not Available	2020	Open in IMG/M
3300031831\|Ga0318564_10238428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	807	Open in IMG/M
3300031835\|Ga0318517_10027978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2240	Open in IMG/M
3300031835\|Ga0318517_10385939	Not Available	633	Open in IMG/M
3300031845\|Ga0318511_10049099	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300031859\|Ga0318527_10523060	Not Available	506	Open in IMG/M
3300031893\|Ga0318536_10553694	Not Available	577	Open in IMG/M
3300031897\|Ga0318520_10839511	Not Available	577	Open in IMG/M
3300031938\|Ga0308175_101826096	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300031941\|Ga0310912_10460157	Not Available	992	Open in IMG/M
3300031942\|Ga0310916_11523438	Not Available	545	Open in IMG/M
3300031954\|Ga0306926_11670521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300031954\|Ga0306926_12655059	Not Available	545	Open in IMG/M
3300032008\|Ga0318562_10317016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	906	Open in IMG/M
3300032009\|Ga0318563_10060399	Not Available	1956	Open in IMG/M
3300032042\|Ga0318545_10290507	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300032054\|Ga0318570_10323255	Not Available	702	Open in IMG/M
3300032055\|Ga0318575_10337439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	763	Open in IMG/M
3300032090\|Ga0318518_10336022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	775	Open in IMG/M
3300032091\|Ga0318577_10127404	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300032261\|Ga0306920_100430757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1960	Open in IMG/M
3300032770\|Ga0335085_11353777	Not Available	748	Open in IMG/M
3300032782\|Ga0335082_11567132	Not Available	531	Open in IMG/M
3300032828\|Ga0335080_10711416	Not Available	1046	Open in IMG/M
3300032828\|Ga0335080_10983180	Not Available	861	Open in IMG/M
3300032828\|Ga0335080_11803308	Not Available	597	Open in IMG/M
3300032892\|Ga0335081_10301360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2123	Open in IMG/M
3300032893\|Ga0335069_10451934	Not Available	1499	Open in IMG/M
3300032954\|Ga0335083_10349892	Not Available	1280	Open in IMG/M
3300033134\|Ga0335073_10089524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4001	Open in IMG/M
3300033134\|Ga0335073_10224289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2313	Open in IMG/M
3300033134\|Ga0335073_10578338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1261	Open in IMG/M
3300033158\|Ga0335077_11250095	Not Available	724	Open in IMG/M
3300033289\|Ga0310914_10670215	Not Available	932	Open in IMG/M
3300034817\|Ga0373948_0177860	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.32%
Host-Associated	Host-Associated	13.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.47%
Plants	Host-Associated → Plants	13.68%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.98%
Freshwater	Environmental → Aquatic → Freshwater	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.97%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.85%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_104296972	3300001867	Forest Soil	MSAALSFEPDEPPGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAMILGTVAGEDGEGL
Ga0063454_1000775523	3300004081	Soil	MSAALSSEPGEPVGSGLPGDAEGGTPQGLYVSLPAGELTLEGFAEDGRADTMAPGPLLAMVLGAVAGESG
Ga0063455_1001139161	3300004153	Soil	MSAALSSEPGEPVGSGLPGDAEGGTPQGLYVSLPAGELTLEGFAEDGRADTMAPGPLLAMVLGAVAGESGEGLPGLSDDQLTGFLSGTRRMESRL
Ga0070683_1017157312	3300005329	Corn Rhizosphere	MSAALSSEPEEPAGSGLPGDGWDGEEGIPQGLYVTAPAEDLTLEGFAAEGRADTMAPGPLLAMVLDTVAGPSGAGLGAVSDDQLIGFLSGTRRMESRLA*
Ga0066388_1041145542	3300005332	Tropical Forest Soil	MSAALSFEPDEPQGSGLSGDQDGDDWDGEDGAQQGLYVTLPAEDLTLEGFAAGGQADTMAPGPLLAVILGAI
Ga0066388_1051298042	3300005332	Tropical Forest Soil	MSAALSPEPGEPDGPGLSGDDAGEHDYAGQGLYVTLPAEELTLEGFAQGGRTDVMAPGPLLAMVLGAVAGEHGEGLAGLSDDQLIGF
Ga0070662_1019262151	3300005457	Corn Rhizosphere	MSAALSPVPDEPQGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMILGAVAGEDGEG
Ga0068853_1014363421	3300005539	Corn Rhizosphere	MSAALSPVPDEPQGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMILGAVAGEDGEGLAGLSDDQLIGFLSGTRRMESQMAWAKM
Ga0070733_110597921	3300005541	Surface Soil	MSAALPCEPDEPAGSGLPGDGWDADAGEGVPQGLYVTAQARDLSLEGFAADGRADTMAPGPVLAMVLDTVAGPDGAGLAGLSDDQLVGFLSGARRME
Ga0066693_102683871	3300005566	Soil	MSAALSSEPDEPAGSGLPGEQGADDCQGIPQGLYVTAPAGELTLEGFAQDGRADTMAPGPLLAMVLDTVAGPDGSALA
Ga0068852_1006605051	3300005616	Corn Rhizosphere	MSAALSFEPDEPPGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGTVAGEDGEGLAGLSDDQLIGFLSGTRRMESQ
Ga0066903_1009483141	3300005764	Tropical Forest Soil	MSAALSFEPDEPQGSGRPGEQDGDSWTGEEGAQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVILGAIAGEDGQGLAGLSDDQLIGFLSGTRRMESQ
Ga0070715_101008083	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSAALSPVPDEPEGSGLPGSGCSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGTVAGEDGEGLAGLSDDQLIGF
Ga0070712_1005727292	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSAALSPVPDEPQGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEGGRADTMAPGPLLAMILGAVAGGGRRRAGGAVG*
Ga0075425_1030355041	3300006854	Populus Rhizosphere	MSAALSFEPDEPPGSGLPGAGWSQDEGAPQRLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGQDGEGLAGLSDDQLIGFLSGTRRMESQMAWA
Ga0075434_1012541921	3300006871	Populus Rhizosphere	MSAALSFEPDEPEGSGLPGSGWSQGEGAPQGLYVTLAAEELTLEGFAEEGRADTMAPGPLLAMILGAVAGEDGEGLAGLSD
Ga0079219_112897172	3300006954	Agricultural Soil	MSAALSFEPDEPPGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAMILGTVAGEDGEGLAGLSDDQLIGFL
Ga0099827_101587283	3300009090	Vadose Zone Soil	MSAAPFPERGPDGGEPEGSAPLPAEDEDWDEEEGLQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAVILSAVAGEDGKGLAELSDNQLIGFLSGARRM
Ga0105238_129048251	3300009551	Corn Rhizosphere	MSAALSPVPDEPQGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMILGAVAGADGEGLAGLSDDQLIGFLSGTRRMESQMAWAK
Ga0126380_122968601	3300010043	Tropical Forest Soil	MSAALPCEPDEPPGSGLPWDGGDADEGIPQGLYVTVAAEELTLEGFAADGRADTMAPGPLLAMVLDTVAGQDGEGLAGLSDDQ
Ga0126376_130204651	3300010359	Tropical Forest Soil	MSAALSFEPDEPQGSGLPGDGWGEDGWDGDGARQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGDDGEGL
Ga0134126_122560621	3300010396	Terrestrial Soil	MSAALSPVPDGPQGSGRPASGWSQDEGAPQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAMILGAVAGEDG
Ga0134123_113235141	3300010403	Terrestrial Soil	MSAALSFEPDEPPGSGLPGDQDGDGWDGDGAQQGLYVTMPAEELTLDGFAEDGRADMMAPGPLLAMILGAVAGEDGEGLAGLSD
Ga0137379_106400813	3300012209	Vadose Zone Soil	MSAVLYPVPDEPVGSGLPGGQDGDGWDEEEGLQQGLYVTLPAGELTLEGFAADGRADTMAPGPLLAVILGAVAGEDGQGLAGLSD
Ga0137387_110589291	3300012349	Vadose Zone Soil	MSAVLYPVPDEPVGSGLPGGQDGDGWDEEEGLQQGLYVTLPAGELTLEGFAADGRADTMAPGPLLAVILGAVAGEDGQGLA
Ga0137367_100794701	3300012353	Vadose Zone Soil	MSAALSFEPDEPPGSGLPGDAEEGIQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGDDGEGLAGLSDDQLIGFLS
Ga0137366_104202041	3300012354	Vadose Zone Soil	MSAALSPEPGEPGGCGLPGEQDGSGWAQEEGTQQGVYVTLPAEELSLEGFAADGRADTMAAGPLLAMVLGAVAGENGEGLAGLSDDQLVGFLSG
Ga0157342_10217002	3300012507	Arabidopsis Rhizosphere	MSAALSFEPDEPPGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAMILGTVAGE
Ga0137404_103300602	3300012929	Vadose Zone Soil	VPDEPHGSGLPGSGWSQDEGAPQGLYVALPAEELTLEGVAEDGRADTMAPGPLLAMILGAVAGKDGEGLAGLSDDQLIGFLSGAARTRLPARR*
Ga0137404_111502801	3300012929	Vadose Zone Soil	MSAALSPEPGEPYGSGLPGDAEEGMPQGLYVTAPAEDLTLEGFAADGRADTMAPGPLLAMVLDTAAGQDGEGLAELSD
Ga0137407_117030431	3300012930	Vadose Zone Soil	MSAALSPVPDEPHGSGLPGSGWSQDEGAPQGLYVALPAEELTLEGFAEDGRADTMAPGPLLAMILGAVAGKDGEGLAGLSDDQLIGFLSGAARTRLPARR*
Ga0157374_111004691	3300013296	Miscanthus Rhizosphere	MSAALSFEPDEPQGSGLPGDGWDEGAAQGLYVTLPAEELTLEGFAEDGRADIMAPGPLLAMVLGTVAGEDGEG
Ga0163162_115693652	3300013306	Switchgrass Rhizosphere	MSAALSPVPDEPQGSGLPGSGWSQDEGASQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGEDGEG
Ga0163162_134266551	3300013306	Switchgrass Rhizosphere	MSAALSPVPDEPQRSGLPGSGWSRDEGASQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMILGAVAGEDGEGLAGLSDDQLI
Ga0182008_103069092	3300014497	Rhizosphere	MSAALSFEPDEPQGSGLPGDGWDEGAAQGLYVTLPAGELTLEGFAEDGRADTMAPGPLLAMVLGAVAGEDGEGLAGLSDDQLIGFLS
Ga0182041_106175911	3300016294	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAV
Ga0182035_101206581	3300016341	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLDTVAGPDGSGLAELSDGQLVGFLSGARRMESRLAWA
Ga0182032_106116931	3300016357	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFANDGRADTMAPGPLLAMVLGAVAGEDGEGLAGLSDDQLI
Ga0182034_102098072	3300016371	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSG
Ga0182034_118561902	3300016371	Soil	MSAALSPEPGEPAGSGLPGDADEGARQGLYVTLPAEDLTLEGFAAGGRADTMAPGPLLAMVLGAVAGEDGAGLAGLSDDQL
Ga0182037_105927022	3300016404	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGVPQGLYVTAPAEELTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLVGLADDQLIGFLSGARRMASRMAWAQMAAMT
Ga0187851_101467461	3300018046	Peatland	MSAALSPEPEEPYGSGLPGNTDEGMPQGLYVTAPAEDLSLEGFAADGRADTMAPGPLLAMVLDTAAGPDGAGLAGLSDDQLIGFLSGARRMESRLAAGGRGDRVRPGG
Ga0187765_102801742	3300018060	Tropical Peatland	MSAALSPEPGEPPDSGLSGEQAGDGVQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVVLGAIAGENGQGLA
Ga0187769_106308531	3300018086	Tropical Peatland	MSAALSPGPGEPQGSGLPREQSEHGWDEGEGIRQGLYVTLPAGELTLDGFAEHGRADTMAPGPLLAMVLGAVAGEDGEGLAGLSDDQLI
Ga0213875_104153392	3300021388	Plant Roots	MSAVLYPVPDEPQGSGMPGEQDGDDWDEEVGLQQGLYVTLPAEELALEGFGADGRADTTAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSGTRRMESRMA
Ga0210392_104139261	3300021475	Soil	MSAALSFEPDEPEGSGLPGSGWSQGEGAPQGLYVTLAAEELTLDGFAEDGRADTMAPGPLLAMVLGAVAGEDGTGLAGLS
Ga0210402_106290261	3300021478	Soil	MSAALSFEPDEPQGSGLPGGQGGLDETEGIPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGEDGKGLAGLSDDQLIGFLSGTRRMES
Ga0126371_115181002	3300021560	Tropical Forest Soil	MSAVLPFEPDEPQGSGLPGDADEGVQPGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVILGAIAGEDGQGLAGLSDDQLIGFLSGTRRMESQMA
Ga0126371_116837043	3300021560	Tropical Forest Soil	MSAALSFEPDEPQGSGRPGEQDGDSWTGEEGAQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVILGAIAGEDG
Ga0179589_101148311	3300024288	Vadose Zone Soil	MSAALSFEPDEPQGSGLPGEQDGDGWDAEEGIRQGLFVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGEDGEGLA
Ga0208848_11153851	3300025509	Arctic Peat Soil	MSAALFPEPDEPSGCGLPGDAEEGIPQGLYVTLPAEELTLEGFVAEGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSGTRRMESRLAWARMAA
Ga0207647_105692012	3300025904	Corn Rhizosphere	VPREVSLDVEPDEPPGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGTVAGEDGEGLAGLSDDQLIGFLHALPVSRLWGVGKV
Ga0207693_110593962	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSAALSPVPDEPQGSGLPGSGWSQDEGAPQGLYVTWPAEELTLEGFAEDGRADTMAPGPLLAMILGAVAGEDGEGLAGLSDDQLIGFLSGTRRMESQMAWAKMAAL
Ga0207664_113722272	3300025929	Agricultural Soil	MSAALSPVPDGPQGSGRPASGWSQDEGAPQGLYVTLPAEELTLEGFAEGGRADTMAPGPLLAMILGAVAGEDGEGLAGLSDDQLIGFLS
Ga0207669_109410321	3300025937	Miscanthus Rhizosphere	MSAALSFEPDEPPGSGLPGDQDGDGWDGDGAQQGLYVTMPAEELTLDGFAEDGRADTMAPGPLLAMILGAVAGRTAKGWPGCPMTS
Ga0207698_117480541	3300026142	Corn Rhizosphere	MSAALSFEPDEPPGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGTVAGEDGEGLAGLSD
Ga0209178_12898431	3300027725	Agricultural Soil	MSAALSFEPDEPEGSGLPGSGWSQGEGAPQGLYVTLAAEELTLEGFAEEGRADTMAPGPLLAMILGAVAGEDGEGLAGLSDDQLIGFLSVP
Ga0209178_13895392	3300027725	Agricultural Soil	MSAALSFEPDEPQGSGRPGSGRSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMILGAVAGEDGEGL
Ga0209073_102553601	3300027765	Agricultural Soil	VSAVLFPEPEEPDGSGLGGDGRDSDEGVPQGLYVTLPAEELTLEGFAQGGRADTMAPGPLLGVVLDAVAGEDGEG
Ga0209177_101858212	3300027775	Agricultural Soil	MSAALSFEPDEPEGSGLPGSGWSQGEGAPQGLYVTLAAEELTLEGFAEEGRADTMAPGPLLAMILGAVAGEDGEGL
Ga0318534_107518452	3300031544	Soil	MSAALSFEPDEPPGSGLSGEQDGDGWDEEVGVQQGLYVTLPAEELTLEGFAEGGRADTMAPGPLLAMVLGAVAGENG
Ga0318541_104422701	3300031545	Soil	MSAALSFEPDEPQGSGLAGERDGDSWAGEEGAQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVILGAIAGEDGQGLAGLSDDQLIGFLSGTRRMESQIA
Ga0318573_103403092	3300031564	Soil	MSAALSFEPDEPRGSGLPGEQDGWDETEGVQQGLYVTLPAGELTLEGFAEGGRTDTMAPGPLLAMVLGAVAGED
Ga0318515_107666331	3300031572	Soil	MSAALSFEPDEPRGSGLPGEQDGWDETEGVQQGLYVTLPAGELTLEGFAEGGRTDTMAPGPLLAMVLGAVAG
Ga0318555_106119721	3300031640	Soil	MSAVLPFEPDEPQGSGLPGDADEGVQQGLYVTLPAEELTLEGFAAGGQADTMAPGPLLAVILGAIAGEDGQGLAGLSDDQLIGFLSGTRRMESQIA
Ga0318574_102163871	3300031680	Soil	MSAALSFEPDEPRGSGLPGEQDGWDETEGVQQGLYVTLPAGELTLEGFAAGGRADTMAPGPLLAMVLGAVAGEDGQGLA
Ga0318496_100090814	3300031713	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLI
Ga0318496_102021891	3300031713	Soil	MSAALSPEPGEPQGAGLPGDAEEGVQQGLYVTLPAEEMTLEGFAAGGRADTMAPGPLLAMVLGAIAGEDGEGLAGLSDDQLIGFLSGTRRMESRMAWARMAAL
Ga0318496_105788842	3300031713	Soil	MSAALSPEPDEPQGSGLPGDAGEGIQPGLYVTLPPEELTLEGFAADGRADTMAPGPLLAVILGAVAGEDGRGL
Ga0318493_100321881	3300031723	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGE
Ga0318535_103900331	3300031764	Soil	MSAALSFEPDEPRGSGLPGEQDGWDETEGVQQGLYVTLPAGELTLEGFAEGGRTDTMAPGPLLAMVLGAVAGEDGQGLAGLSDDQLIGFLSGTRRMESQ
Ga0318554_102401673	3300031765	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGVPQGLYVTAPAEQLTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLVGLSDDQLIGFLSG
Ga0318509_105469321	3300031768	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVL
Ga0318521_109412881	3300031770	Soil	MSAALYPEPDEPQGSRQPGEQDRDGWDEEEGIQQGLYATLQAEELTLEGFANDGRADTMAPGPLLAVLLGAIAGEDGEGLAGLSDDQLIGFLAGT
Ga0318546_102200053	3300031771	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGVPQGLYVTAPAEQLTLEGFAQDGRADTMAPGPLLAMILDTVAG
Ga0318546_110050221	3300031771	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFL
Ga0318547_107847641	3300031781	Soil	MSAALSFEPDEPPGSGLSGEQDGDGWDEEVGVEQGLYVTLPAEVLTLEGFAEGGRADTMAPGPLLAMVLGAVVGENGEGLAGLS
Ga0318552_104724591	3300031782	Soil	MSAALSFEPDEPQGSGLAGEQDKDSWAGEEGAQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVILGAIA
Ga0318552_104918711	3300031782	Soil	MSAALSPEPDEPQGSGLPGDAGEGIQPGLYVTLPPEELTLEGFAADGRADTMAPGPLLAVILGAVAGEDGRGLAGLSDDQLIGFLSGTRRMESQ
Ga0318552_105851821	3300031782	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGVPQGLYVTAPAEQLTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLVGLSDDQLIGFLSGARRMASR
Ga0318576_105552251	3300031796	Soil	MSAALYPEPDEPQGSRQPGEQDRDGWDEEEGIQQGLYATLQAEELTLEGFANDGRADTMAPGPLLAMVLGAVAGEDGEGL
Ga0318568_105722212	3300031819	Soil	MSAALSFEPDEPPGSGLSGEQDGDGWDEEVGVQQGLYVTLPAEELTLEGFAEGGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGF
Ga0318567_100578242	3300031821	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGEGLAG
Ga0318564_102384281	3300031831	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGVPQGLYVTAPAEQLTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLVGLSDDQLIGFLSGARRMASRMA
Ga0318517_100279781	3300031835	Soil	MSAALSFEPDEPQGSGLAGERDKDSWAGEEGAQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVILGAIAGEDGQGLAGLSDDQLVGFLSGTRRMESQMA
Ga0318517_103859392	3300031835	Soil	MSAALSPEPGEPQGSGLPGEQDGDGWAGEEGLQQGLYVTLPAEEMTLEGFAAGGRADTMAPGPLLAMVLGAIAGDDGQG
Ga0318511_100490992	3300031845	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSGTR
Ga0318527_105230601	3300031859	Soil	MSAALSFEPDEPRGSGLPGEQDGWDETEGVQQGLYVTLPAGELTLEGFAEGGRTDTMAPGPLLAMVLGAV
Ga0318536_105536941	3300031893	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSGVRRMESRLAWAR
Ga0318520_108395111	3300031897	Soil	MSAALSPEPGESQCSGLPGDAEGGIQQGLYVTLPAEDLTLEGFAADGRADTMAPGPLLAVLLGAIAGEDGE
Ga0308175_1018260961	3300031938	Soil	MSAALFPEPDEPSGSGLPGDAEEGIPQGLYVTAPAEDLTLEGFATDGRADTMAPGPLLAMVLDTVAGPAGEGLA
Ga0310912_104601572	3300031941	Soil	MSAALSFEPDEPPGSGLSGEQDGDGWDEEVGVQQGLYVTLPAEELTLEGFAEGGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSGVRRMES
Ga0310916_115234381	3300031942	Soil	MSAALSFEPDEPRGSGLPGEQDGWDETEGVQQGLYVTLPAGELTLEGFAAGGRADTMAPGPLLAMVLGAVAGEDGQGLAGLSDDQLIGFLSGTRRMESQMAWAKMA
Ga0306926_116705211	3300031954	Soil	MSAALSPEPGEPQGYGLPGDAEEGVQQGLYVTLPAEEMTLEGFAAGGRADTMAPGPLLAMVLGAIAGEDGEGLAG
Ga0306926_126550591	3300031954	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGVPQGLYVTAPAEQLTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLVGLSDDQLIGFLSGAR
Ga0318562_103170161	3300032008	Soil	MSAALSFEPDEPQGSGLAGERDGDSWAGEEGAQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVILGAIAGED
Ga0318563_100603992	3300032009	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLS
Ga0318545_102905072	3300032042	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSGARR
Ga0318570_103232552	3300032054	Soil	MSAALSFDPDEPPGSGLSGEQDGDGWDEEEGAQQGLYVTLPAGELTLEGFAEGGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSGVRRMESRLA
Ga0318575_103374391	3300032055	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGVPQGLYVTAPAEQLTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLVGLSD
Ga0318518_103360221	3300032090	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGVPQGLYVTAPAEQLTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLVG
Ga0318577_101274042	3300032091	Soil	MSVVLYPEPDEPQGSGLPREQDEDGWDAVEGAQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGENG
Ga0306920_1004307571	3300032261	Soil	MSAALSFEPDEPQGSGLAGEQDKDSWAGEEGAQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAVILGAIAGEDGQGLAGLSDD
Ga0335085_113537772	3300032770	Soil	MSAALSPGPEEPDGSGLLGDGWDGEEGIPQGLYVTAPAEELTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLAGLSDDQLIGFLCGARRMASRMA
Ga0335082_115671322	3300032782	Soil	MSAALYPEPDEPRGSGLPGDAEEGAQQGLYVTLPAEELTLEGFAAGGRADTMAPGPLLAMVLGAVAGEDGEGLAGLSDDQLIGFLS
Ga0335080_107114162	3300032828	Soil	MSAALSFEPDEPPGSGLSGEQDGDGWDEEEGAQQGLYVTLPAGELTLEGFAEGGRADTMAPGPLLAMVLGAVAGENGEGLAGLSDDQLIGFLSGVRRM
Ga0335080_109831801	3300032828	Soil	MSAVQSPGPGEPRGCGLPGDDDGEGVPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGVAAGEHGEGLAGLSDDQLVGF
Ga0335080_118033082	3300032828	Soil	MSAVLSPGPDEPRGCELPGEGRGDGRDEGEGLQQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGVAAGEHGEGLAGLSDD
Ga0335081_103013601	3300032892	Soil	MSAALSFEPDEPRGSGLPGDAGEGIQPGLYVTLPPEELTLEGFAANGRADTMAPGPLLAVILGAIAGEDGQGLAGLSDDQLIGFLSGTRRMESRMAWAK
Ga0335069_104519342	3300032893	Soil	MSAALSSEPDEPECSGLPGDAEEGTPQGLYVTLPAEELTLEGFAEGGRADTMAPGALLAMVLGAVAGDGGEGLAGMADDQLVGFLWGTRRMESHLAWAR
Ga0335083_103498921	3300032954	Soil	MSAALSPEPEEPDGSGLLGDGWDGEEGIPQGLYVTAPAEELTLEGFAQDGRADTMAPGPLLAMILDTVAGQDGEGLAGLSDDQLIGFLSGARR
Ga0335073_100895244	3300033134	Soil	MSAALSPEPEEPELPEEGMPQGLYVTLPAEELTLEGFAAGGRADTMPPGPLLSVVLGAVAGDDGEGLRTLSDDQLVGFLSGTRRMESRLAWARM
Ga0335073_102242892	3300033134	Soil	MSAALSPEPEEPPLPDEDEGIQPGLYVTLPAEELSLEGFAADGRADTMAPGPLLAVVLDAVAGPHGEGLATPVR
Ga0335073_105783383	3300033134	Soil	MSAALFPEPEPEGSGLDGDRWEGGEGIPQGLFVTAPAEELSLEGFVQDGRADTMAPGPLLAMVLDTVAGQDGAGLVGMSDDQLLGFLSGTRRMAARLEWAR
Ga0335077_112500951	3300033158	Soil	MSAALSFEPDEPQGSGLPGEQDADGWDGDGARQGLHVTLPAEELTLEGFAEDGRADTMAPGPLLAMVLGAVAGEDG
Ga0310914_106702151	3300033289	Soil	MSAALSFEPDEPPGSGLPGDAEEGIPQGLFVTLPAEDLTLDGFAAGGRADTMAPGPLLAVLLGAVAGEDGQGLA
Ga0373948_0177860_1_255	3300034817	Rhizosphere Soil	MSAALSFEPDEPPGSGLPGSGWSQDEGAPQGLYVTLPAEELTLEGFAEDGRADTMAPGPLLAIVLGAVAGEDGEGLAGLSDDQLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077874

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences