Metagenome Family F077856

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077856
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	71 residues
Representative Sequence	SGNRIRHITIKTPDDLKRPEVRSYIRRARKKALADARKLGEPSPAKPKGVVSTVKAIYPKKRRPK
Number of Associated Samples	99
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.60 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.726 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.932 % of family members)
Environment Ontology (ENVO)	Unclassified (36.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.410 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.56% β-sheet: 0.00% Coil/Unstructured: 63.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF07676	PD40	40.17
PF01625	PMSR	5.98
PF02012	BNR	1.71
PF00583	Acetyltransf_1	1.71
PF13946	DUF4214	1.71
PF13711	DUF4160	1.71
PF00535	Glycos_transf_2	0.85
PF02900	LigB	0.85
PF14870	PSII_BNR	0.85
PF13302	Acetyltransf_3	0.85
PF02371	Transposase_20	0.85
PF00211	Guanylate_cyc	0.85
PF02897	Peptidase_S9_N	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	5.98
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.85
COG1770	Protease II	Amino acid transport and metabolism [E]	0.85
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.73 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.73 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.73 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.27 %
Unclassified	root	N/A	4.27 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.59 %
Unclassified	root	N/A	4.27 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.71 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.85 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.59 %
Unclassified	root	N/A	4.27 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.71 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.85 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.59 %
Unclassified	root	N/A	4.27 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.59 %
Unclassified	root	N/A	4.27 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.71 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.59 %
Unclassified	root	N/A	4.27 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.71 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.59 %
Unclassified	root	N/A	4.27 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.71 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig117251	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300000953\|JGI11615J12901_10921955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300001361\|A30PFW6_1372156	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300003203\|JGI25406J46586_10099377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300004778\|Ga0062383_10413666	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300005093\|Ga0062594_103135377	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300005167\|Ga0066672_10379136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	925	Open in IMG/M
3300005171\|Ga0066677_10032965	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300005175\|Ga0066673_10561613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300005176\|Ga0066679_10057364	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300005184\|Ga0066671_10914304	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005186\|Ga0066676_10417046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300005294\|Ga0065705_11197552	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005330\|Ga0070690_100398269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300005332\|Ga0066388_108586443	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005440\|Ga0070705_100089091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1917	Open in IMG/M
3300005440\|Ga0070705_101544468	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005445\|Ga0070708_100130856	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300005445\|Ga0070708_101377318	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005451\|Ga0066681_10420468	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005459\|Ga0068867_100445195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300005466\|Ga0070685_10185395	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005471\|Ga0070698_101794882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300005518\|Ga0070699_100148126	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	2075	Open in IMG/M
3300005552\|Ga0066701_10143945	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300005553\|Ga0066695_10261870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300005576\|Ga0066708_10189547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1285	Open in IMG/M
3300005598\|Ga0066706_10123237	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300005615\|Ga0070702_100057052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2257	Open in IMG/M
3300005764\|Ga0066903_100784906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1700	Open in IMG/M
3300006163\|Ga0070715_10349693	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300006755\|Ga0079222_10043216	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300006797\|Ga0066659_10347877	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1149	Open in IMG/M
3300006800\|Ga0066660_11444744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300006800\|Ga0066660_11617801	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300006854\|Ga0075425_101288046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300006854\|Ga0075425_102372960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300006871\|Ga0075434_101185448	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006904\|Ga0075424_100390670	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300006904\|Ga0075424_102020984	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300009038\|Ga0099829_11143829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300009088\|Ga0099830_11207312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300009089\|Ga0099828_11873140	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009090\|Ga0099827_10943921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300009090\|Ga0099827_11077877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300009090\|Ga0099827_11829869	Not Available	529	Open in IMG/M
3300009093\|Ga0105240_12583276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300009100\|Ga0075418_12940093	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300009137\|Ga0066709_104309179	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300009137\|Ga0066709_104341926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009156\|Ga0111538_11361981	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300010046\|Ga0126384_11352655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300010046\|Ga0126384_12125652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010303\|Ga0134082_10324688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300010362\|Ga0126377_10544976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300010371\|Ga0134125_11226294	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300010396\|Ga0134126_12816021	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300010397\|Ga0134124_10596131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300010398\|Ga0126383_12398792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300010399\|Ga0134127_12557698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300011269\|Ga0137392_10755419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300011438\|Ga0137451_1090017	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300012096\|Ga0137389_11608614	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300012189\|Ga0137388_11315891	Not Available	662	Open in IMG/M
3300012204\|Ga0137374_10128429	All Organisms → cellular organisms → Bacteria → Proteobacteria	2313	Open in IMG/M
3300012206\|Ga0137380_10345182	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300012208\|Ga0137376_10404703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300012208\|Ga0137376_11144709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012285\|Ga0137370_10387973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300012349\|Ga0137387_10308408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300012353\|Ga0137367_10045805	All Organisms → cellular organisms → Bacteria	3309	Open in IMG/M
3300012353\|Ga0137367_11072045	Not Available	546	Open in IMG/M
3300012355\|Ga0137369_10196503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1563	Open in IMG/M
3300012357\|Ga0137384_10992547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300012358\|Ga0137368_10115051	All Organisms → cellular organisms → Bacteria → Proteobacteria	2052	Open in IMG/M
3300012362\|Ga0137361_10421430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300012511\|Ga0157332_1064541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012923\|Ga0137359_10096918	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300012923\|Ga0137359_10439334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300012927\|Ga0137416_11939929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012948\|Ga0126375_11002254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300012948\|Ga0126375_11659621	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300012955\|Ga0164298_11146904	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300012961\|Ga0164302_11346343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300012977\|Ga0134087_10323413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300013297\|Ga0157378_10223213	All Organisms → cellular organisms → Bacteria → Acidobacteria	1792	Open in IMG/M
3300013297\|Ga0157378_11527491	Not Available	713	Open in IMG/M
3300015069\|Ga0167633_104369	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300015253\|Ga0180081_1105967	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300015371\|Ga0132258_11950708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300015373\|Ga0132257_103208484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	595	Open in IMG/M
3300015374\|Ga0132255_100753139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300015374\|Ga0132255_101886171	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300015374\|Ga0132255_103758715	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300018084\|Ga0184629_10568290	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300018429\|Ga0190272_10457888	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300018431\|Ga0066655_10997351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300021088\|Ga0210404_10450834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300021344\|Ga0193719_10400449	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300025899\|Ga0207642_11107139	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300025910\|Ga0207684_10347747	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300025922\|Ga0207646_11460461	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300025923\|Ga0207681_11545679	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300025939\|Ga0207665_10743035	Not Available	773	Open in IMG/M
3300026088\|Ga0207641_10580351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300026089\|Ga0207648_10858220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300026312\|Ga0209153_1055123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1417	Open in IMG/M
3300026542\|Ga0209805_1435814	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300026550\|Ga0209474_10233275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300026551\|Ga0209648_10576231	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300027862\|Ga0209701_10255673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300027862\|Ga0209701_10498751	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300027862\|Ga0209701_10734923	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300027903\|Ga0209488_11052142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300028281\|Ga0247689_1033346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300028381\|Ga0268264_10359844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1388	Open in IMG/M
3300032261\|Ga0306920_101994916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.20%
Host-Associated	Host-Associated	18.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.78%
Plants	Host-Associated → Plants	18.80%
Aquatic	Environmental → Aquatic	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.40%
Sediment	Environmental → Aquatic → Sediment	2.56%
Freshwater	Environmental → Aquatic → Freshwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.25%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015069	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4C, Ice margin, adjacent to proglacial lake	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_00597820	2140918007	Soil	GATLDDPKGILKGSGTHIRHITIKTPADLKCPEVRAYIRRAIKSALADARKLGEITPPKPKGVISVVKKIYAKKRRPTRIPTRKRT
JGI11615J12901_109219552	3300000953	Soil	IKIRKPEDLKRPELRTYIRRARKKALTEAPKLGERPVPPDGVISTVKAIYAKKRRPR*
A30PFW6_13721562	3300001361	Permafrost	DDPKQLLQGTGKSIRHLTIKRQKDLARPAIRSYLRRARRLAIADARKLGETGAKNMDGVVSTVKAIYPKRRRPAQSR*
JGI25406J46586_100993773	3300003203	Tabebuia Heterophylla Rhizosphere	GNRIRHIKIRKPEDLKRPELRSYIRRARKKALAEGRKLGERYQPPDGVVSTVKAIYPKKRRPK*
Ga0062383_104136661	3300004778	Wetland Sediment	PAGILEGAGKQIRHIKIRSPEDLLRPEVRSYIRRARKVALADARKLGETTPLLKGVVSKVKAIYPKKRRPAPKDKR*
Ga0062594_1031353772	3300005093	Soil	EGTGNRIRHIKIRKPEDLERPELRAYIRRARKKALAEARKLGERYQPPDGVVSTVKAIYPKKRRPT*
Ga0066672_103791362	3300005167	Soil	LDDPKGILQGAGNRIRHITIKTPADLKRPEVRSYIRRARKKAIVEARKIGEPARQKPDRVISTVKAIYPKKRRPK*
Ga0066677_100329651	3300005171	Soil	DDPKGILQGSGKVIRHITMKASEDLERPELRAYIRRARKKALSDARKLGEPAPEKPEGVVSTVKAIYPKKRRPK*
Ga0066673_105616131	3300005175	Soil	GNRIRHIKIRKPEDLKRPELRAYIRHARKKALADARKLGEQISAKPKGVVSTVKAIYAKKRRPK*
Ga0066679_100573642	3300005176	Soil	ILQGNGNQIRHITIKSVEDIKRPELRAYIRRARKKAFADARKLGEPLPKQPDGVISTVKAIYARKRRPK*
Ga0066671_109143042	3300005184	Soil	GKGSRIRHISIKSLNDLQRPELRSYIRRARKEALTDAKSLCEAAPQKPKGVISTVKAVYANKRRPARNSKQKKA*
Ga0066676_104170462	3300005186	Soil	LQGAGNRIRHITIKTPEDLEQPELRAYIRRARKKAVADARKLGEALPKKPEGVVSTVKAVYPKKRRPKAKT*
Ga0065705_111975522	3300005294	Switchgrass Rhizosphere	LQGQGSRIRHITIKSRDELERPELRAYIRRARKQAVADAKKMGEPMPTKPSRVISTVKAIYPKKRRPAGSG*
Ga0070690_1003982691	3300005330	Switchgrass Rhizosphere	RHITIKSRDELERPELRAYIRRARKQAIADAKKMGEPTPVKPKGVVSTVKAIYPKKRRPAGSG*
Ga0066388_1085864432	3300005332	Tropical Forest Soil	RIRHITIKSESDLARPEIRAYIRRAKKKAAADARKLGEAPPPKPAGVVSTVKAIYPKKRRPK*
Ga0070705_1000890911	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GILQGKGNRIRHLTIKSESDLARPEIRAYIRRAKKKALAEARKLGEPMPKKPDGVVSTVKAIYARKRRP*
Ga0070705_1015444681	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ADPAGILEGAGKQIRHIKIRSPADLERPEVRAYVRRARRLAIDDARKLGETASKVKGVVSTVKAIYPKKRRPIVDGKVRKSD*
Ga0070708_1001308561	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TLDDPKGILLGSGNRIRHITIKTADDLKRPEVRAYIRRARKKALADARKLGEPASVKPKGVVSTVKAIYPKKRRPK*
Ga0070708_1013773181	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KGILEGKGNRIRHIKIRTPDDLARPEIRSYLRRARKAALEDARKLGEPATKPKRVVSTVKAIYPRKRRPK*
Ga0066681_104204681	3300005451	Soil	QGSGKQIRHITIKAPQDLDRPELRAYIRRARKKALDDARKLGEPAPKKTEGVVSTVKAIYPKKRRPKAKT*
Ga0068867_1004451951	3300005459	Miscanthus Rhizosphere	HIKIRKPEDLERPELRAYIRRARKKALAEARKLGERYQPPDGVVSTVKAIYPKKRRPT*
Ga0070685_101853951	3300005466	Switchgrass Rhizosphere	KGILLGSGNRIRHLTIKTVDDLKRPEVRSYIRRARKKALADARKLGEPAPAKPKGVVSTVKAIYPKKRRPK*
Ga0070698_1017948821	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	NRIRHIKIRCEADLKRPELRTYIRRARKQALTDARKLGEPPPKKSDGVVSTVKAIYPKKRRPK*
Ga0070699_1001481265	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	HLTIKSRADVARPEVRAYIRRAHKKALADAHKLGEPAPKKPDGVISTVKAIYPKKRRPS*
Ga0066701_101439452	3300005552	Soil	EGKGSRIRHITIKSSNDLQRPELRSYICRARKKALADAKKLGDTAPQKPKGVISTVKAVYANKRRPARNSKQKKA*
Ga0066695_102618702	3300005553	Soil	ILEGAGNQIRHISIKTPDDLARPEIRAYIQRARKVALAESKKLGHAPPKKPKGVVSTVKAIYAKKRRPK*
Ga0066708_101895472	3300005576	Soil	SGKVIRHITMKASEDLERPELRAYIRRARKKALADARKLGEALPKKPEGVVSTVKAVYPKKRRPKAKT*
Ga0066706_101232373	3300005598	Soil	SLEDPKGILQGSGKQIRHITIKAPQDLDRPELRAYIRRARKKALDDARKLGEPAPKKPEGVVSTVKAIYPKKRRPK*
Ga0070702_1000570522	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TLGDPKGILQGQGSRIRHITIKSRDELERPELRAYIRRARKQAIADAKKMGEPTPVKPKGVVSTVKAIYPKKRRPAGSG*
Ga0066903_1007849062	3300005764	Tropical Forest Soil	GAALADPKGILQGNGNQIRHISFKHPADLERPEVRAYIRRAKKKAFADARKLGEPPPQKPARVISTVKAIYAKKRRPK*
Ga0070715_103496932	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LNDPKRILQGSGNRIRHITIKSEADLARPEIRAYIRRAKKKAAADARKLGEAPRPKPAGVVSTVKAIYPKKRRPK*
Ga0079222_100432162	3300006755	Agricultural Soil	ADPKGILEGSGNRIRHIKIRKPEDLEQPELRTYIRRARKQALAEARKLGERHQPPDRVISTVKAIYPKKRRPR*
Ga0066659_103478772	3300006797	Soil	ILQGSGKVIRHITMKASEDLERPELRVYIRRARKKALSDARKLGEPAPEKPEGVVSTVKAIYPKKRRPKTKT*
Ga0066660_114447441	3300006800	Soil	ITIETPDDVKRPELRAYIRRTRKKVLADARKLGEPAPKKPEGVISIVKAIYPKKRRPNRT
Ga0066660_116178011	3300006800	Soil	ATLDDPKRILDGDGNRIRHISIKTIADLKRPEIRAYIRRAKKKALADAKKLGEKLPAKPNGVMSTVKAIYAKKRRPK*
Ga0075425_1012880461	3300006854	Populus Rhizosphere	SGNRIRHIKIRKPEDLERPELRAYIRRARKKALTEARKLGERPVPPDGVISTVKAIYPKKRRPS*
Ga0075425_1023729602	3300006854	Populus Rhizosphere	NRIRHISIKSESDLARPEIRAYIRRAKKSALAEARKLGEKPPQKPAGVISTVKAIYAKKRRP*
Ga0075434_1011854482	3300006871	Populus Rhizosphere	LEGTGNRIRHIKIRKPEDLKRPELRAYIRRARKKAVADARKLGEPIAPKPDRVVSTVKAIYARKRRPNKLQV*
Ga0075424_1003906702	3300006904	Populus Rhizosphere	ADPKGILQGKGNRIRHLSIKRESDLARPEIRAYIRRAKKKALAEARKLGEQPPKKPAGVVSTVKAVYAKKRRP*
Ga0075424_1020209842	3300006904	Populus Rhizosphere	GNRIRHIKIRKPEDLERPELRAYIRRARKKALTEARKLGERPVPPDGVISTVKAIYPKKRRPS*
Ga0099829_111438291	3300009038	Vadose Zone Soil	EGAGNRIRHLTIRTPDDLKRPEIRSYLRRARKVALAEGRKLGEAPAKKPKGVISTVKAIYPKKRRPK*
Ga0099830_112073121	3300009088	Vadose Zone Soil	RIRHLAIKTPEDLARPEIRAYIQRARKFAMAEARKLGEPPPPKPKGVVSTVKAIYPKKRRPK*
Ga0099828_118731401	3300009089	Vadose Zone Soil	RIRHMTIKTPEDIKRPEIRSYIRRARKKALADARKLGEPTPKKPNGVISTVKAIYPKKRRPIRT*
Ga0099827_109439211	3300009090	Vadose Zone Soil	HITIRTPEDLARPEIRAYIKRAQKFAPAEARKLGDAPTKKPKGVVSTVKAIYAKKRRPTKT*
Ga0099827_110778772	3300009090	Vadose Zone Soil	LGAGNQIRHLTIKTPDDLARPEIRAYLKRARKFALAEAKKLGEPPPQKPKGVVSTVKAIYPKKRRPK*
Ga0099827_118298691	3300009090	Vadose Zone Soil	TIKTADDLARPEIRAYLKRARKVALAEGKKLGDPPPKKPKGVVSTVKAIYAKKRRPK*
Ga0105240_125832761	3300009093	Corn Rhizosphere	ADPKGILQGNGNRIRHLTIKTADDLKRPELRSYIRRARKQALAEARKLGETQPKPKGVVSTVKAIYPKKRRPK*
Ga0075418_129400931	3300009100	Populus Rhizosphere	NDGATLDDPKGILLGSGNRIRHITIRTADDLKRPEVRSYIRRARKKALTDARKLGEPAPAKPKGVVSTVKAIYPKKRRPK*
Ga0066709_1043091791	3300009137	Grasslands Soil	LDDPKGILQGSGKLIRHITIETAEDLKRPELRTYIRRARKKATADARKLGEPAPEKPDGVVSTVKAIYQKKRRPK*
Ga0066709_1043419261	3300009137	Grasslands Soil	ILLGDGKHIRHITIKTADDIARPELRAYIRHARKKALADAKKLGEAAPDKPDGVISTVKAIYPKKRRPIKK*
Ga0111538_113619811	3300009156	Populus Rhizosphere	TLDDPKGILQGQGSRIRHITIKSRDELERPELRAYIRRARKQAVADAKKMGEPMPTKPSRVISTVKAIYPKKRRPQS*
Ga0126384_113526552	3300010046	Tropical Forest Soil	GNRIRHIKIRKPEDLERPELRAYIRRARKKALAEARKLGERHEPPDGVVSTVKAIYAKKRRPK*
Ga0126384_121256522	3300010046	Tropical Forest Soil	DPKGILLGSGNRIRHITIRTVTDLQKPEIRSYIRRARKKALTDAARLGERMERPASVVSTVKAIYAKKRRPK*
Ga0134082_103246881	3300010303	Grasslands Soil	NRIRHITIKTPEDLERPELRAYIRRARKKALADARKLGEALPKKPEGVVSTVKAVYPKKRRPKAKT*
Ga0126377_105449762	3300010362	Tropical Forest Soil	LADPKGILQGNGNRVRHIPVRSQTDLERPEIRAYIRRARRQALADARKLGETPPLRPDGVVSTVKAIYPKKRRPK*
Ga0134125_112262942	3300010371	Terrestrial Soil	PSRILEGTGKQIRHIKIRSQSDLERPEVRSYVRRARQVAIDDARKLGETAAPVDGVVSTVKAIYPRKRRPSPK*
Ga0134126_128160211	3300010396	Terrestrial Soil	KGILEGTGNRIRHIKIRKPEDLKRPELRAYIRRARKKALADARKLGEPIAPKPDGVVSTVKAIYARKRRPKKPQV*
Ga0134124_105961312	3300010397	Terrestrial Soil	LDDPKAILEGKGNRIRHISIKSESDLARPEIRAYIRRAKKKALAEARKLGERPSAKPAGVISTVKAVYAKKRRP*
Ga0126383_123987921	3300010398	Tropical Forest Soil	LDDPKGILEGAGNRIRHIKIRKPADLKRPEIRGYIRRARKKALAEARKLGESPAKPPKDIVSIVKAIYPKKRRPK*
Ga0134127_125576981	3300010399	Terrestrial Soil	GILEGKGSRIRHIKIRSEQDLARPELRAYIKRARKAAADDARRLGEQQTKPKGVISTVKAIYPKKRRPTRNLKLNKA*
Ga0137392_107554192	3300011269	Vadose Zone Soil	LLGSGNRIRHLAIKTPEDLARPEIRAYIQRARKFAMAEARKLGEPPPPKPKGVVSTVKATYPKKRRPK*
Ga0137451_10900171	3300011438	Soil	NHGATLKDPLGILKGTGKQIRHLTIKAPADLARPEIRAYLRRARKVAMDDARKLGDAAPKNITRVVSTVKAVYPKKRRPVRSRDR*
Ga0137389_116086141	3300012096	Vadose Zone Soil	LTIKTPDDLTRPEIRAYLKRARKFALAEAKKLGESPPQKPEGVVSTVKAIYPKKRRPK*
Ga0137388_113158911	3300012189	Vadose Zone Soil	RHLTIKSPADIARPEIRAYIRRARKQALADARKLGEPAPKKPDRVISTVKAIYQKKRRPK
Ga0137374_101284291	3300012204	Vadose Zone Soil	DPLGILKGSGRQIRHITIKTLADLAKPEIRSYVRRARKVAIDDARKLGDTREKNKSLKGKDVISVVKAIYPKRRRPTQTS*
Ga0137380_103451821	3300012206	Vadose Zone Soil	LGFNDGATLADPKGILEGTGNRIRHLTIKTADDLRRPEIRGYIKRARKVALAEGKKLGDAPPKKSKGVVSTVKAIYAKKRRPK*
Ga0137376_104047031	3300012208	Vadose Zone Soil	TLDDPKGILQGAGNRIRHITIKTPEDIKRPEVRAYIRRARKKAMADARKLGEPAPKKPAGVVSTVKAIYAKKRRPG*
Ga0137376_111447091	3300012208	Vadose Zone Soil	TLDDPKGILQGAGNRIRHITIKTPEDIKRPEVRAYIRRARKKAMADARKLGEPARKKPAGVVSTVKAIYAKKRRPK*
Ga0137370_103879731	3300012285	Vadose Zone Soil	ILQGAGNRIRHIKIRTASDLERPELRAYIRRARRKALADARKLGEPTPKKPQGVVSTVKAIYAKKRRPG*
Ga0137387_103084081	3300012349	Vadose Zone Soil	DPKGILQGDGSRIRHITIKTPQDLERPELRAYIRRARKKALDDARKLGEPAPRKPEGVVSTVKAIYPKKRRPKAKT*
Ga0137367_100458051	3300012353	Vadose Zone Soil	DPLGILKGSGRQIRHITIKTLADLAKPEIRSYVRRARKVAINDARKLGDSREKNKSLKGKDVISVVKAIYPKRRRPTQTS*
Ga0137367_110720451	3300012353	Vadose Zone Soil	QIRHITIKTPADLARPEIRSYLHRACKTAITDARKLGEAPPQKPKGVVSVVKAIYPKKRRPVAGGGGR*
Ga0137369_101965031	3300012355	Vadose Zone Soil	HGATLADPLGILKGSGRQIRHITIKTLADLAKPEIRSYVRRSRKVAIKDARKLGDTREKNKSLKGKDVISVVKAIYPKRRRPTQTS*
Ga0137384_109925472	3300012357	Vadose Zone Soil	GDGSRIRHITIKTPQDLERPELRAYIRRARKKALDDARKLGEPAPRKPEGVVSTVKAIYPKKRRPK*
Ga0137368_101150514	3300012358	Vadose Zone Soil	GSGRQIRHITIKTLADLAKPEIRSYVRRARKVAIDDARKLGDTREKNKSLKGKDVISVVKAIYPKRRRPTQTS*
Ga0137361_104214302	3300012362	Vadose Zone Soil	DDPKGILQGAGNHIRHITIKTPADIKRPEIRAYIRRARKKALSDARKLGEPAPLKPTRVISTVKAIYARKRRPK*
Ga0157332_10645411	3300012511	Soil	KIRKPDDLKRPELRAYIRRARKKALAEARKLGEAPKQKPNGVVSTVKAIYPKKRRPK*
Ga0137359_100969182	3300012923	Vadose Zone Soil	VTLDDPKGILQGAGNRIRHITIKTTDDIKRPEIRAYIRRARKKALTDARKLGEPTPPKPVHVISTVKAIYAKKRRPK*
Ga0137359_104393342	3300012923	Vadose Zone Soil	GNRIRHISIKTPEDLKRPELRAYIRRARKKAIADARKLGEPLPKKPRGVVSIVKAKYAKKRRPK*
Ga0137416_119399292	3300012927	Vadose Zone Soil	LKIKTPEDIKRPEVRAYIRRARRKAPADARKLGEPAPKKPAGVVSTVKAIYPKKRRPVKK
Ga0126375_110022541	3300012948	Tropical Forest Soil	KGILEGSGSSIRHIKIRKPEDLERPELRAYIRRARKKALAEARKLGERHEPPDGVVSTVKAIYAKKRRPT*
Ga0126375_116596212	3300012948	Tropical Forest Soil	ADPKGILQGNGNRIRHIPIRSQTDLERPEIRAYIRRARKQALADARKLGETQPPGPDGVVSTVKAIYPKKRRPK*
Ga0164298_111469041	3300012955	Soil	SGKLIRHIKIRTPADLVRPEIRAYVRRARQVAIDDARKLGETVSKVEGVVSTVKAIYPKKRRPVPNP*
Ga0164302_113463431	3300012961	Soil	HITIKSESDLARPEIRAYIRRAKKKALAEARKLGEKPLKQPAGVVSTVKAIYAKKRRP*
Ga0134087_103234131	3300012977	Grasslands Soil	RIRHIKIRKPEDLKRPELRAYIRRARKKALTDARKLGEQISAKPKGVVSTVKAIYAKKRRPK*
Ga0157378_102232132	3300013297	Miscanthus Rhizosphere	KGILEGTGNRIRHIKIRKPEDLKRPELRAYIRRARKKALADARKLGEPIAPKPDGVVSTVKAIYARKRRPKKNQV*
Ga0157378_115274911	3300013297	Miscanthus Rhizosphere	RIRHITIKSRDELERPELRAYIRRARKQAIADAEKVGDPMPAKPSRVSSTVKAIYPKKRRPQS*
Ga0167633_1043692	3300015069	Glacier Forefield Soil	GNGKHIRHISIKSPADLKRPEIRAYVRRARKAALDDLRKLGEAPPPPPKSVVSTVKAIYPKKRRPTRIPGKKKA*
Ga0180081_11059671	3300015253	Soil	DPKGILEGAGNRIRHITIKTHEDLARPAIRAYIRRARKQALSDARKLGEPAATKPAGVISTVKAIYAKKRRPK*
Ga0132258_119507081	3300015371	Arabidopsis Rhizosphere	GNRIRHIKIRKPEDLKRPELRSYIRRARKRALAEARKLGERHEPPDGVVSTVKAIYPKKRRPR*
Ga0132257_1032084842	3300015373	Arabidopsis Rhizosphere	GATLDDPKGILLGSGNRIRHITIRTVDDLKRPELRSYIRRARKKALAEARKLGEPAPAKPKGVVSTVKAIYPKKRRPK*
Ga0132255_1007531391	3300015374	Arabidopsis Rhizosphere	EGSGNRIRHIKIRKPEDLKRPELRAYIRRARKKALTEARRLGERPVAPTDVVSTVKAIYPKKRRPN*
Ga0132255_1018861711	3300015374	Arabidopsis Rhizosphere	DGATLDDPKGILQGQGSRIRHITIKSRDELERPELRAYIRRARKQAIADAKKMGDPMPAKPSRVISTVKAIYPKKRRPQS*
Ga0132255_1037587152	3300015374	Arabidopsis Rhizosphere	NDGATLADPKGILQGHGNRIRHISIKNDSDLARPEIRAYIRRAKKKAMAEARKLGEPPPKKPAGVISTVKAVYAKKRRPK*
Ga0184629_105682901	3300018084	Groundwater Sediment	TLDDPLGILKGNGNQIRHISIKTPADLARPEIRAYIRRARKVALDDARKLGETTPKNIKGVISTVKAIYPKKRRPSSKT
Ga0190272_104578881	3300018429	Soil	GTGKHIRHITIKTPEDLAKPELRAYVRRARQSAIDDARKLGEPIPNIDRVVSTVKAIYAKKRRPG
Ga0066655_109973511	3300018431	Grasslands Soil	DPKGILQGSGKQIRHITIKTAEDLERPELRAYIRRARKKALADARKLGEALPKKPEGVVSTVKAVYPKKRRPKAKT
Ga0210404_104508342	3300021088	Soil	NQIRHITIRAPEDLARPEIRAYIKRARKFALAEAKKLGDPPPQKPKGVVSTVKAIYPKKRRPK
Ga0193719_104004492	3300021344	Soil	HIKIRSQSDLARPELRGYVRRARQVAIDDARKLGETAPPVDGVISTVKAIYPKKRRPSPESRK
Ga0207642_111071391	3300025899	Miscanthus Rhizosphere	GATLADPKSILQGNGNRIRHLTIKTADDLKRPELRSYIRRARKQALAEARKLGETQPKPKGVVSTVKAIYPKKRRPK
Ga0207684_103477474	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NRIRHLTIKSPADVARPEVRAYIRRAHKKALADAHKLGGPAPKKPDGVISTVKAIYPKKRRPK
Ga0207646_114604611	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ILEGTGKQIRHIKIRSQSDLERPELRGYVRRARQVAIEDARKLGETVPAVDGVISTVKAIYARKRRPAPSRGSDR
Ga0207681_115456792	3300025923	Switchgrass Rhizosphere	TLDDPKGILKGKGNRIRHITFDSESDLARPEIRAYIRRAKKNALAEARKLGEKPPKKPAGVISTVKAIYAKKRRP
Ga0207665_107430351	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GNRIRHISIKTAEDLKRPELRAYIRRAKKKAIAEARKLGEAAAQKPKGVVSTVKAIYKKKRRPK
Ga0207641_105803512	3300026088	Switchgrass Rhizosphere	GATLDDPKGILLGSGNRIRHLTIKTVDDLKRPEVRSYIRRARKKALADARKLGEPAPAKPKGVVSTVKAIYPKKRRPK
Ga0207648_108582201	3300026089	Miscanthus Rhizosphere	GNRIRHIKIRKPEDLERPELRAYIRRARKKALAEARKLGERYQPPDGVVSTVKAIYPKKRRPT
Ga0209153_10551232	3300026312	Soil	TGNRIRHIKIRKPEDLKRPELCAYIRRARKKALADARKLGEPTGAKPKGVVSTVKAIYAKKRRPKR
Ga0209805_14358141	3300026542	Soil	DDPKGILQGSGKVIRHITMKASEDLERPELRAYIRRARKKALSDARKLGEPAPEKPEGVVSTVKAIYPKKRRPK
Ga0209474_102332752	3300026550	Soil	HIKIRKPEDLKRPELRAYIRHARKKALADARKLGEQISAKPKGVVSTVKAIYAKKRRPK
Ga0209648_105762311	3300026551	Grasslands Soil	LADPQGILLGAGNQIRHLTIKTRDDLARPEIRAYLKRARKFALAEAKKLGDPPPQKPKGVVSTVKAIYPKKRRPK
Ga0209701_102556731	3300027862	Vadose Zone Soil	GAGNRIRHLTIKTPDDLKRPEIRSYLRRARKVALAEARKLGEAPAKKPKGVISTVKAIYPKKRRPK
Ga0209701_104987511	3300027862	Vadose Zone Soil	AVYTKHVNLGFNDGATLADRIRHLTIKTPDDLKRPEIRSYLRRARKVALAEARKLGEPPPKKPKGVVSTVKAIYPKKRRPK
Ga0209701_107349232	3300027862	Vadose Zone Soil	RIRHLAIKTPEDLARPEIRAYIQRARKFAMAEARKLGEPPPPKPKGVVSTVKAIYPKKRRPK
Ga0209488_110521422	3300027903	Vadose Zone Soil	LGSGNRIRHITIKTPADIKRPEIRAYIRRARKKALSDARKLGEPAPPKPAGVISTVKAVYPKKRRPKGQT
Ga0247689_10333462	3300028281	Soil	KQIRHLTIKSLEDIKRPELRAYIRRAKKKAFADARKLGEPSPKQPAGVVSTVKAIYAKKRRPK
Ga0268264_103598441	3300028381	Switchgrass Rhizosphere	SGNRIRHITIKTPDDLKRPEVRSYIRRARKKALADARKLGEPSPAKPKGVVSTVKAIYPKKRRPK
Ga0306920_1019949161	3300032261	Soil	GASLADPKGILLGNGNRIRHIRFKTETDLTRSDVRAYIRRAKKQALAEARKLGEPPPKKPAGVISTVKAIYAKKRRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077856

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences