Metagenome / Metatranscriptome Family F077840

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077840
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	66 residues
Representative Sequence	MDREPYASTISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTRRPDRPRRVA
Number of Associated Samples	95
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.52 %
% of genes near scaffold ends (potentially truncated)	25.64 %
% of genes from short scaffolds (< 2000 bps)	85.47 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.325 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (10.256 % of family members)
Environment Ontology (ENVO)	Unclassified (28.205 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.752 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.55% β-sheet: 0.00% Coil/Unstructured: 57.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01464	SLT	33.33
PF11941	DUF3459	6.84
PF00753	Lactamase_B	6.84
PF03401	TctC	2.56
PF02518	HATPase_c	1.71
PF12697	Abhydrolase_6	0.85
PF00501	AMP-binding	0.85
PF00561	Abhydrolase_1	0.85
PF00128	Alpha-amylase	0.85
PF08327	AHSA1	0.85
PF07173	GRDP-like	0.85
PF12973	Cupin_7	0.85
PF13738	Pyr_redox_3	0.85
PF00155	Aminotran_1_2	0.85
PF01226	Form_Nir_trans	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.56
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.85
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.85
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.85
COG2116	Formate/nitrite transporter FocA, FNT family	Inorganic ion transport and metabolism [P]	0.85
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.32 %
Unclassified	root	N/A	13.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.32 %
Unclassified	root	N/A	13.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.32 %
Unclassified	root	N/A	13.68 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.79 %
Unclassified	root	N/A	13.68 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	47.01 %
Unclassified	root	N/A	13.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.42 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	43.59 %
Unclassified	root	N/A	13.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	43.59 %
Unclassified	root	N/A	13.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.85 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	43.59 %
Unclassified	root	N/A	13.68 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	43.59 %
Unclassified	root	N/A	13.68 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.85 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.85 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000881\|JGI10215J12807_1100829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1422	Open in IMG/M
3300000891\|JGI10214J12806_12116208	Not Available	791	Open in IMG/M
3300000953\|JGI11615J12901_10547044	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300002568\|C688J35102_120554288	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300002568\|C688J35102_120870424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1922	Open in IMG/M
3300003267\|soilL1_10189983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1270	Open in IMG/M
3300004156\|Ga0062589_101881908	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300004157\|Ga0062590_100678880	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300004157\|Ga0062590_100904046	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300004157\|Ga0062590_102914872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	512	Open in IMG/M
3300004463\|Ga0063356_105612083	Not Available	538	Open in IMG/M
3300004479\|Ga0062595_100363071	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300004643\|Ga0062591_102601479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	533	Open in IMG/M
3300005289\|Ga0065704_10350492	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005294\|Ga0065705_10277761	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300005330\|Ga0070690_100320251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1117	Open in IMG/M
3300005332\|Ga0066388_100002586	All Organisms → cellular organisms → Bacteria → Proteobacteria	11174	Open in IMG/M
3300005332\|Ga0066388_101296794	Not Available	1255	Open in IMG/M
3300005334\|Ga0068869_100019634	All Organisms → cellular organisms → Bacteria → Proteobacteria	4623	Open in IMG/M
3300005356\|Ga0070674_101923667	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005444\|Ga0070694_100298451	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300005444\|Ga0070694_100339863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1160	Open in IMG/M
3300005526\|Ga0073909_10169511	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300005545\|Ga0070695_100364162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1087	Open in IMG/M
3300005614\|Ga0068856_101653375	Not Available	653	Open in IMG/M
3300005617\|Ga0068859_100514848	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292	Open in IMG/M
3300005713\|Ga0066905_101315571	Not Available	651	Open in IMG/M
3300005841\|Ga0068863_101149328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	781	Open in IMG/M
3300005844\|Ga0068862_100354464	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300006049\|Ga0075417_10306430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	771	Open in IMG/M
3300006163\|Ga0070715_10607268	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300006604\|Ga0074060_11970347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	977	Open in IMG/M
3300006605\|Ga0074057_11977707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	519	Open in IMG/M
3300006844\|Ga0075428_101845681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	629	Open in IMG/M
3300006844\|Ga0075428_102302852	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006871\|Ga0075434_102553392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	512	Open in IMG/M
3300006894\|Ga0079215_11435606	Not Available	541	Open in IMG/M
3300006918\|Ga0079216_11503814	Not Available	564	Open in IMG/M
3300006954\|Ga0079219_10205044	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300007076\|Ga0075435_101588328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	574	Open in IMG/M
3300007255\|Ga0099791_10300268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	765	Open in IMG/M
3300009094\|Ga0111539_11459980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	793	Open in IMG/M
3300009609\|Ga0105347_1293399	Not Available	680	Open in IMG/M
3300009610\|Ga0105340_1030352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2099	Open in IMG/M
3300009678\|Ga0105252_10356990	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300009818\|Ga0105072_1072866	Not Available	670	Open in IMG/M
3300010046\|Ga0126384_10069560	All Organisms → cellular organisms → Bacteria → Proteobacteria	2498	Open in IMG/M
3300010373\|Ga0134128_10525329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1319	Open in IMG/M
3300010373\|Ga0134128_12589647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	559	Open in IMG/M
3300010397\|Ga0134124_10714958	Not Available	993	Open in IMG/M
3300010399\|Ga0134127_10282389	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300010399\|Ga0134127_10520090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1205	Open in IMG/M
3300010400\|Ga0134122_10171443	All Organisms → cellular organisms → Bacteria → Proteobacteria	1780	Open in IMG/M
3300010400\|Ga0134122_11970246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	621	Open in IMG/M
3300010400\|Ga0134122_13056286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	522	Open in IMG/M
3300010401\|Ga0134121_10366800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1292	Open in IMG/M
3300011430\|Ga0137423_1115511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	803	Open in IMG/M
3300011432\|Ga0137428_1101973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	816	Open in IMG/M
3300011434\|Ga0137464_1063648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1049	Open in IMG/M
3300011439\|Ga0137432_1002550	All Organisms → cellular organisms → Bacteria → Proteobacteria	5213	Open in IMG/M
3300011442\|Ga0137437_1180544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	732	Open in IMG/M
3300012212\|Ga0150985_104053893	Not Available	775	Open in IMG/M
3300012212\|Ga0150985_111765255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	648	Open in IMG/M
3300012469\|Ga0150984_106430903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	755	Open in IMG/M
3300012514\|Ga0157330_1007069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1006	Open in IMG/M
3300012961\|Ga0164302_10609127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	793	Open in IMG/M
3300013297\|Ga0157378_10395516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1360	Open in IMG/M
3300014866\|Ga0180090_1105476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300014868\|Ga0180088_1083820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	574	Open in IMG/M
3300015371\|Ga0132258_12242687	Not Available	1370	Open in IMG/M
3300015371\|Ga0132258_13961189	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300017792\|Ga0163161_10844271	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300018083\|Ga0184628_10005739	All Organisms → cellular organisms → Bacteria → Proteobacteria	5933	Open in IMG/M
3300018422\|Ga0190265_10534846	All Organisms → cellular organisms → Bacteria → Proteobacteria	1287	Open in IMG/M
3300018429\|Ga0190272_10033175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2825	Open in IMG/M
3300019377\|Ga0190264_12226464	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300024178\|Ga0247694_1011168	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300024219\|Ga0247665_1003711	All Organisms → cellular organisms → Bacteria → Proteobacteria	1579	Open in IMG/M
3300024224\|Ga0247673_1007254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1397	Open in IMG/M
3300024284\|Ga0247671_1000816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8658	Open in IMG/M
3300024284\|Ga0247671_1011328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1356	Open in IMG/M
3300024310\|Ga0247681_1079335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300025942\|Ga0207689_11430124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	579	Open in IMG/M
3300025949\|Ga0207667_10040778	All Organisms → cellular organisms → Bacteria → Proteobacteria	4941	Open in IMG/M
3300025961\|Ga0207712_10021529	All Organisms → cellular organisms → Bacteria → Proteobacteria	4234	Open in IMG/M
3300027513\|Ga0208685_1049169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	914	Open in IMG/M
3300027533\|Ga0208185_1034920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1230	Open in IMG/M
3300027821\|Ga0209811_10000688	All Organisms → cellular organisms → Bacteria → Proteobacteria	13042	Open in IMG/M
3300027873\|Ga0209814_10203726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	855	Open in IMG/M
3300027907\|Ga0207428_10468675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	917	Open in IMG/M
3300027909\|Ga0209382_10545316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1271	Open in IMG/M
3300027909\|Ga0209382_10592738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1208	Open in IMG/M
3300028592\|Ga0247822_11036326	Not Available	679	Open in IMG/M
3300028812\|Ga0247825_11314094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	529	Open in IMG/M
3300030006\|Ga0299907_10542635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	913	Open in IMG/M
3300031152\|Ga0307501_10000824	All Organisms → cellular organisms → Bacteria	3002	Open in IMG/M
3300031226\|Ga0307497_10281855	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300031547\|Ga0310887_10406303	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031562\|Ga0310886_10033160	All Organisms → cellular organisms → Bacteria → Proteobacteria	2198	Open in IMG/M
3300031716\|Ga0310813_10754688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	873	Open in IMG/M
3300031720\|Ga0307469_10396328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1177	Open in IMG/M
3300031740\|Ga0307468_100034210	All Organisms → cellular organisms → Bacteria → Proteobacteria	2467	Open in IMG/M
3300031740\|Ga0307468_100056417	All Organisms → cellular organisms → Bacteria → Proteobacteria	2090	Open in IMG/M
3300031740\|Ga0307468_100427508	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300031740\|Ga0307468_100433276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1017	Open in IMG/M
3300031740\|Ga0307468_100726384	Not Available	835	Open in IMG/M
3300031740\|Ga0307468_101579935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300031740\|Ga0307468_102192751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	534	Open in IMG/M
3300031820\|Ga0307473_10991499	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300031913\|Ga0310891_10168800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	720	Open in IMG/M
3300032174\|Ga0307470_10374344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	997	Open in IMG/M
3300032174\|Ga0307470_10534209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	863	Open in IMG/M
3300032211\|Ga0310896_10173747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1040	Open in IMG/M
3300033551\|Ga0247830_10118766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1889	Open in IMG/M
3300034148\|Ga0364927_0137252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	698	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.07%
Host-Associated	Host-Associated	23.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.96%
Plants	Host-Associated → Plants	23.93%
Aquatic	Environmental → Aquatic	11.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.97%
Sediment	Environmental → Aquatic → Sediment	11.11%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.26%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.71%
Sand	Environmental → Terrestrial → Soil → Sand	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	10.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10215J12807_11008292	3300000881	Soil	MDREMYASTISSAVDYFEGYGTLAVILNVSVDDLRCWAEGRSYPPADVLHRIVNLTRRLNRPRRVSWN*
JGI10214J12806_105648831	3300000891	Soil	MDREMYASTISSAVDYFEGYGTLAVILNVSVDDLRCWAEGRSYPPADVLHRIV
JGI10214J12806_121162083	3300000891	Soil	MDRELYASTISSAVEFFEGYGTLAVILNVSVEDLRRWAEGRSRPPVDVFLRIVDLTRRPVRSPLRSLN*
JGI11615J12901_105470442	3300000953	Soil	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRLATLARR
C688J35102_1205542881	3300002568	Soil	MEDTYASSISSAVEFFEGYGTLAVILNVQVDDLRRWADGTSYPPADVLRRIVNLRRPERLRSVA*
C688J35102_1208704242	3300002568	Soil	MEDTYASSISSAVEFFEGYGTLAVILNVQVDDLRRWAEGTSYPPADVLRRIVNLRRPDRLRSVA*
soilL1_101899833	3300003267	Sugarcane Root And Bulk Soil	MEREPYAATISRAVELFEGYGTLAVILNVSVADLRRWADGTSYPPADVLRRLASLALRPRTLN*
Ga0062589_1018819081	3300004156	Soil	MDRELYTRTISSAVEYFEGYGMLAVILNVGVEDLRRWAEGKSRPPVDVFLRIVDLTTPPLRRRGSPVWTPHV*
Ga0062590_1006788802	3300004157	Soil	MDREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVV*
Ga0062590_1009040461	3300004157	Soil	MDRALYTSTISSAAKHFEGYGTLAVLLNVSIDDLRRWARGESYPPADVLQRIGNLGKPLRAAD*
Ga0062590_1029148721	3300004157	Soil	MEKETYASTIWSAVEFFEGYGTLAVILNVNVDDLRRWAEGQSYPPADVLRRIVNLRRADRLRSVA*
Ga0063356_1056120831	3300004463	Arabidopsis Thaliana Rhizosphere	MDREMYASTISSAVDYFEGYGTLAVILNVSVDDLRCWAEGRSYPPADVLHRIVNLTRRLNRPRRVS
Ga0062595_1003630712	3300004479	Soil	MEKETYASTIWSAVEFFEGYGTLAVILNVNVDDLRRWAEGQSYPPADVLRRIVNLRRPDRLRSVA*
Ga0062591_1026014792	3300004643	Soil	MEKETYASTISSAVEFFEGYGTLAVILNVHVDDLRRWAEGESYPPADVLRRIVNLRRPDRLRSVA*
Ga0065704_103504921	3300005289	Switchgrass Rhizosphere	MNREHYSSTISSAVEYFEGYGTLAVILNVSVADLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVV*
Ga0065705_102777612	3300005294	Switchgrass Rhizosphere	MNREHYSSTISSAVEYFEGYGTLAVILNVSVADLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSIV*
Ga0070690_1003202511	3300005330	Switchgrass Rhizosphere	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRIAALARRPDASPIRRLA*
Ga0066388_10000258613	3300005332	Tropical Forest Soil	MDRDLYADTISSAVEFFEGYGTLAVILNVNVEDLRRWAEGTSYPPADVYHRIVNLTKRADRAPRPRAS*
Ga0066388_1012967942	3300005332	Tropical Forest Soil	MDREHYSKAISSAVEFFEGYGTLAVILNVSVDDLRRWADGKSYPPAEVLRRLATLARRPDAAPVRKLA*
Ga0068869_1000196343	3300005334	Miscanthus Rhizosphere	MDREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVL*
Ga0070674_1019236671	3300005356	Miscanthus Rhizosphere	MDREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVERKSYPPAEVLRRIDNLRRPDRLR
Ga0070694_1002984511	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDRELYASTISSAAKYFEGYGTLAVILNVSVDDLQRWVRGESYPPADVLRRIVNLTIRPQRSAKRV*
Ga0070694_1003398632	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDRELYARTISSAVEYFEGYGMLAVILNVSVDELRRWAEGRARPPVDVFLRIVDLTTPPLRRRGSPVWTPHV*
Ga0073909_101695112	3300005526	Surface Soil	MEKETYANSISSAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPADVLRRIVNLRRPDRLHSVA*
Ga0070695_1003641623	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDRELYARTISSAVEYFEGYGMLAVILNVSVAELRRWAEGRARPPVDVFLRIVDLTTPPLRRRGSPVWTPHV*
Ga0070704_1017440722	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDRELYARTISSAVEYFEGYGMLAVILNVSVDELRRWAEGRARPPVDVFLRIVDLTTPPLRRRG
Ga0068856_1016533752	3300005614	Corn Rhizosphere	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRIAALARRP
Ga0068859_1005148482	3300005617	Switchgrass Rhizosphere	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRLATLARRPDAAPVRRLA*
Ga0066905_1013155711	3300005713	Tropical Forest Soil	MDRDLYADTISSAVEFFEGYGTLAVILNVNVEDLRRWAEGKSYPPADVYHRIVNLTRRADLGPRPRAS*
Ga0068863_1011493282	3300005841	Switchgrass Rhizosphere	MEKETYASTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGQSYPPADVLRRIVNLRRPDRLRSVA*
Ga0068862_1003544641	3300005844	Switchgrass Rhizosphere	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRLATLARRPDTAPVRRLA*
Ga0075417_103064301	3300006049	Populus Rhizosphere	MEKETYASTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPGDVLHRIVNLRRPDRLRSVA*
Ga0070715_106072682	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGTSYPPAEVLRRLATLARRPEAAPVRRLA*
Ga0074060_119703471	3300006604	Soil	MEKDTYTNTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGQSYPPADVLRRIVNLRRPDRLRSVA*
Ga0074057_119777071	3300006605	Soil	RSSLEAREPKRHCMEKDTYTNTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGESYPPADVLRRIVNLRRPDRLRSVA*
Ga0075428_1018456812	3300006844	Populus Rhizosphere	MNREHYSSTISSAVEYFEGYGTLAVILNVSVADLRHWVEGKSYPPAEVLHRIDNLRRPERLRSVV*
Ga0075428_1023028522	3300006844	Populus Rhizosphere	MDRDLYASTITSAVEFFEGYGTLAVILNVRVEDLRLWAEGKSYPPADVYNRIVKLTRPSLN*
Ga0075434_1025533922	3300006871	Populus Rhizosphere	MDREHYSSTISSAVEFFEGYGTLAVILNVSVADLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVV*
Ga0079215_114356061	3300006894	Agricultural Soil	MDRETELYASTISGVVEYFEGYGTLAVILNVNVDDLRRWAEGKSRPPEDVFLRIVDLHQSR*
Ga0079216_115038141	3300006918	Agricultural Soil	MDRETELYASTISGVVEYFEGYGTLAVILNVNVDDLRRWAEGKSRPPEDVFLRILDLHQSR*
Ga0079219_102050442	3300006954	Agricultural Soil	MEREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRLATLARRPDAVPVRRLA*
Ga0075435_1015883282	3300007076	Populus Rhizosphere	MEKETYASTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPGDVLRRIVNLRRPDRLRSVA*
Ga0099791_103002682	3300007255	Vadose Zone Soil	MQKETYASTISSAVEFFEGYGTLAVILNVNVDDLRRWAAGESYPPADVLRRILNLRRPDRLRNVA*
Ga0111539_114599802	3300009094	Populus Rhizosphere	AVEFFEGYGTLAVILNVSVDDLRRWVEGKTYPPAEVLRRIDNLRRPERLRSVV*
Ga0105347_12933993	3300009609	Soil	MDRELYASKISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTRRPDRPRRVA*
Ga0105340_10303522	3300009610	Soil	MDREPYANTISNAVEFFEGYGTLAVILNVSVEDLRRWAEGKSYPPADVYHRIVNLTARTERAPKLRLN*
Ga0105252_103569902	3300009678	Soil	MDREPYASTISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTRRPDRPRRVA*
Ga0105072_10728661	3300009818	Groundwater Sand	MDRNLYTSTISNAVEFFEGYGTLAVILNVSVHDLRGWAEGKTYPPADVLRRILNLTGRRDWAAKRSLN*
Ga0126384_100695602	3300010046	Tropical Forest Soil	MDREHYSKAISKAVELFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRIAALAKRPDASPIRKLA*
Ga0134128_105253293	3300010373	Terrestrial Soil	DREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVL*
Ga0134128_125896472	3300010373	Terrestrial Soil	DREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVV*
Ga0134124_107149581	3300010397	Terrestrial Soil	EFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVL*
Ga0134127_102823892	3300010399	Terrestrial Soil	MDRELYASTISSAAKYFEGYVTLAVILNVSVDDLQRWVRGESYPPADVLRRIVNLTIRPQRSAKRV*
Ga0134127_105200902	3300010399	Terrestrial Soil	MDSELYASTISDAAEYFEGYGTLAVILNVSVDDLRRWATGESYPPADVLRRIGNLALRPDWGAKREPMPLELTAKPQR*
Ga0134122_101714432	3300010400	Terrestrial Soil	MEKETYASTIWSAVEFFEGYGTLAVILNVNVDDLRRWAEGQSYPPADVLRRIANLRRPDRLRSVA*
Ga0134122_119702461	3300010400	Terrestrial Soil	REASMDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRIAALARRPDASPIRRLA*
Ga0134122_130562861	3300010400	Terrestrial Soil	ASTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPGDVLRRIVNLRRPDRLRSVA*
Ga0134121_103668005	3300010401	Terrestrial Soil	MREVPMDRELYASTISSAAKYFEGYGTLAVILNVSVDDLQRWVRGESYPPADVLRRIVNLTIRPQRSAKRV*
Ga0137423_11155111	3300011430	Soil	SMDREPYANTISNAVEFFEGYGTLAVILNVSVEDLRRWAEGKSYPPADVYHRIVNLTARTERAPKLRLN*
Ga0137428_11019733	3300011432	Soil	MDRELYASKISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTRRPDRPRRLA*
Ga0137464_10636482	3300011434	Soil	MDREPYANTISSAVEFFEGYGTLAVILNVSVEDLRRWAEGKSYPPADVCHRIVNLTTRTERAAKLRLN*
Ga0137432_10025504	3300011439	Soil	MDRELYASKISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTRRPDRPRSVA*
Ga0137437_11805442	3300011442	Soil	MENETYASTIWSAVEFFEGYGTLAVILNVNVDDLRRWAEGQSYPPADVLRRIVNLRRPDRLRSVA*
Ga0150985_1040538932	3300012212	Avena Fatua Rhizosphere	EKDTYVSTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGVSYPPADVLRRIVNLRRPDRLRSVA*
Ga0150985_1117652552	3300012212	Avena Fatua Rhizosphere	MEETYASSISSAVEFFEGYGTLAVILNVHVDDLRRWAEGKSYPPADVLHRIVSLRRPDRLRSVA*
Ga0150984_1064309032	3300012469	Avena Fatua Rhizosphere	KRHGMEKETYATSISSAVEFFEGYGTLAVILNVNVDDLRRWADGKSYPPADVLLRIVNLRRPDRLRSVA*
Ga0157330_10070692	3300012514	Soil	KRHSMEKETYASTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPGDVLRRIVNLRRPDRLRSVA*
Ga0164302_106091271	3300012961	Soil	ISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVV*
Ga0157378_103955163	3300013297	Miscanthus Rhizosphere	SSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVL*
Ga0180090_11054762	3300014866	Soil	MDREPYASTISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTGRPDRPRRVA*
Ga0180088_10838202	3300014868	Soil	MDRELYASKISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTRRLDRPRSVA*
Ga0132258_122426872	3300015371	Arabidopsis Rhizosphere	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRIAALARRPEAAPIRRLA*
Ga0132258_139611892	3300015371	Arabidopsis Rhizosphere	MEKETYASTISSAVEFFEGYGTLAVILNVHVDDLRRWAEGHSYPPADVLRRIVNLRRADRLRSVA*
Ga0163161_108442712	3300017792	Switchgrass Rhizosphere	MDREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVV
Ga0184628_100057395	3300018083	Groundwater Sediment	MENETYASTIWSAVEFFEGYGTLAVILNVNVDDLRRWAEGQSYPPADVLRRIVNLRRPDRLRSVA
Ga0190265_105348462	3300018422	Soil	MDRELYVSTISSLVDYFEGYGTLALILNVKVDDLRRWAEGKSRPPVDVFLRIIDLTDRAATTSKRSLN
Ga0190272_100331754	3300018429	Soil	MDKELYASTISNVVEYFEGYATLAVILNVNVEDLRQWAEGKSRPPIDVFLRIADFNRATGQEAKSSLN
Ga0190264_122264641	3300019377	Soil	MDLEPYARTISRALELFEGYPTLAVILNVRVADLRRWADGTAYPPGDVLRRLAGLNLKGQREAAD
Ga0247694_10111682	3300024178	Soil	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRIAALARRPDASPIRRLA
Ga0247665_10037113	3300024219	Soil	MDREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRSGRLRLSMRR
Ga0247673_10072542	3300024224	Soil	ASMDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRIAALARRPDASPIRRLA
Ga0247671_10008167	3300024284	Soil	REHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVV
Ga0247671_10113283	3300024284	Soil	ISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVL
Ga0247681_10793352	3300024310	Soil	REASMDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRLATLARRPEAAPVRRLA
Ga0207689_114301241	3300025942	Miscanthus Rhizosphere	ISGAVEVFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRSVV
Ga0207667_100407781	3300025949	Corn Rhizosphere	MDREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLRRPDRLRS
Ga0207712_100215295	3300025961	Switchgrass Rhizosphere	MDREHYSSTISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKSYPPAEVLRRIDNLR
Ga0208685_10491692	3300027513	Soil	MDRELYASKISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTRRPDRPRRVA
Ga0208185_10349203	3300027533	Soil	MDREPYANTISNAVEFFEGYGTLAVILNVSVEDLRRWAEGKSYPPADVYHRIVNLTARTERAPKLRLN
Ga0209811_1000068816	3300027821	Surface Soil	MEKETYANSISSAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPADVLRRIVNLRRPDRLHSVA
Ga0209814_102037261	3300027873	Populus Rhizosphere	MEKETYASTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPGDVLHRIVNLRRPDRLRSVA
Ga0207428_104686752	3300027907	Populus Rhizosphere	MDREHYSSAISSAVEFFEGYGTLAVILNVSVDDLRRWVEGKTYPPAEVLRRIDNLRRPERLRSVV
Ga0209382_105453161	3300027909	Populus Rhizosphere	MDRELYASTISSAVEYFEGYATLAVILNVRVEDLRRWAEGETYPPADVLRRIVDMARPPRRIPRRRAN
Ga0209382_105927381	3300027909	Populus Rhizosphere	KETYASTISSAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPGDVLHRIVNLRRPDRLRSVA
Ga0247822_110363261	3300028592	Soil	MDREPYANTISSAVEFFEGYGTLAVILNVNVEDLRRWAEGKSYPPADVYHRIVNLTMRTQRVPKLRLN
Ga0247825_113140941	3300028812	Soil	KASAVEFFEGYGTLAVILNVNVDDLRRWAEGKSYPPGDVLRRIVNLRRPDRLRSVA
Ga0299907_105426351	3300030006	Soil	LRSTESQRESMDRELYASTISSLVEDFEGYGTLAVILNVNVDDLRRWAEGKSRPPVDVFLRIVDLTKRPARTTKRSLN
Ga0307501_100008243	3300031152	Soil	MEKETYASTIWSAVEFFEGYGTLAVILNVNVDDLRRWAEGQSYPPADVLRRIVNLRRPDRLRSVA
Ga0307497_102818552	3300031226	Soil	MKSEHYSSTISSALELFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRISNLVRRPEAAPIRRIA
Ga0310887_104063032	3300031547	Soil	MDREHYSSAISSAVEFFEGYGTLAVILNVSVADLRHWVEGKSYPPAEVLHRIDNLRRPDRLRSVV
Ga0310886_100331602	3300031562	Soil	MDREHYSSAISSAVEFFEGYGTLAVILNVSVADLRHWVEGKSYPPAEVLHRIDNLRRPERLRSVV
Ga0310813_107546882	3300031716	Soil	MDREHYSRAISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPAEVLRRLATLARRPDAAPVRRLA
Ga0307469_103963282	3300031720	Hardwood Forest Soil	TISSAVEFFEGYGTLAVILNVSVADLRRWVEGKSYPPAEVLHRIDNLRRPDRLRSVA
Ga0307468_1000342102	3300031740	Hardwood Forest Soil	MDREPYASTISSAVEFFEGYGTLAVILNVNVEDLRRWAEGKSYPPADVYHRIVNLTKRTGRTPKLRLN
Ga0307468_1000564172	3300031740	Hardwood Forest Soil	MEKETYASTISNAVEFFEGYGTLAVILNVNVDDLRRWAEGVSYPPADVLLRIVNLRRPDRLRSVA
Ga0307468_1004275082	3300031740	Hardwood Forest Soil	MDREHYSSTISSAVEFFEGYGTLAVILNVSVDDLHRWVEGKSYPPAEVLRRIADLPRRRGRGHVAAA
Ga0307468_1004332762	3300031740	Hardwood Forest Soil	MDREHYSSASSSAVEFFEGYGTLAVILNVSVADLRGWAEGKSYPPAEVLRRIANLGGRPVIAKPRRW
Ga0307468_1007263842	3300031740	Hardwood Forest Soil	MDRNLYTSTISNAVEFFEGYGTLAVILNVSVDDLRGWAEGKTYPPADVLRRILNLTGRRDWAAKRSLN
Ga0307468_1015799351	3300031740	Hardwood Forest Soil	MDREPYANTISSAVEFFEGYGTLAIILNVNVEDLRRWAEGKSYPPADVYHRIVNLTKRTQRVPKLRLN
Ga0307468_1021927512	3300031740	Hardwood Forest Soil	MEKETYASTISSAVEFFEGYGTLAVILNVSVADLRRWVEGKSYPPAEVLHRIDNLRRPDRLRSVA
Ga0307473_109914992	3300031820	Hardwood Forest Soil	MDREHYSSAISSAVEFFEGYGTLAVILNVSVADLRGWAEGKSYPPAEVLRRIANLGGRPVIAKPRRW
Ga0310891_101688001	3300031913	Soil	MDREPHATISSAVEFFEGYGTLAVILNVHVDDLRRWAEGESYPPADVLRRIVNLRRPDRLRSVA
Ga0307470_103743441	3300032174	Hardwood Forest Soil	MDKETYASTISSAVEFFEGYGTLAVILNVSVDDLHRWVEGKSYPPAEVLRRIADLPRRRGRGHVAAA
Ga0307470_105342091	3300032174	Hardwood Forest Soil	MDREPYANTISSAVEFFEGYGTLAVILNVSVEDLRRWAEGKSYPPADVYHRIVNLTKRTQRVPKLRLN
Ga0310896_101737472	3300032211	Soil	MDREHYSSTISSAVEFFEGYGTLAVILNVSVADLRHWVEGKSYPPAEVLHRIDNLRRPERLRSVV
Ga0247830_101187662	3300033551	Soil	MDTELYANTISSAVEFFEGYGTLAVILNVSVEDLRRWAEGKSYPPADVYHRIVNLTKRTERVPKLRLN
Ga0364927_0137252_284_484	3300034148	Sediment	MDREPYASTISSAVEFFEGYGTLAVILNVSVDDLRRWAEGKSYPPADVYLRIVNLTRRPDRPRSVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077840

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences