Metagenome / Metatranscriptome Family F077821

Basic Information
Family ID	F077821
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	58 residues
Representative Sequence	CGIVLAAIAGVLGSADALAEKAPLFHALGGLAGSNLLAFGLFAALGVLLYRIGLRNQ
Number of Associated Samples	95
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.641 % of family members)
Environment Ontology (ENVO)	Unclassified (43.590 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.718 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01497	Peripla_BP_2	60.68
PF09587	PGA_cap	9.40
PF05343	Peptidase_M42	5.13
PF07731	Cu-oxidase_2	0.85
PF03169	OPT	0.85
PF00730	HhH-GPD	0.85
PF01370	Epimerase	0.85
PF10129	OpgC_C	0.85
PF00005	ABC_tran	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	60.68
COG4558	ABC-type hemin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	60.68
COG4592	ABC-type Fe2+-enterobactin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	60.68
COG4594	ABC-type Fe3+-citrate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	60.68
COG4607	ABC-type enterochelin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	60.68
COG1362	Aspartyl aminopeptidase	Amino acid transport and metabolism [E]	5.13
COG1363	Putative aminopeptidase FrvX	Carbohydrate transport and metabolism [G]	5.13
COG2195	Di- or tripeptidase	Amino acid transport and metabolism [E]	5.13
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.85
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.85
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.85
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.85
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	0.85
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.85
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.85

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.45%
Host-Associated	Host-Associated	8.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.18%
Plants	Host-Associated → Plants	8.55%
Aquatic	Environmental → Aquatic	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.55%
Sediment	Environmental → Aquatic → Sediment	2.56%
Freshwater	Environmental → Aquatic → Freshwater	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.79%
Loam	Environmental → Terrestrial → Soil → Loam	13.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100735671	3300002558	Grasslands Soil	IAGGAICGIVLAAIAGVLGSADALAERVPIFTALGNLPHSIGLAFGLFGLLGALLYWVGRREQ*
JGI25384J37096_100329202	3300002561	Grasslands Soil	VLGSADALAERVPVFHALGALPQSNLLAFVLFAALGATLYRVALRNE*
JGI25382J37095_100152644	3300002562	Grasslands Soil	GLIAGGAICGIVLAAIAGVLGSADALAEKAPLFHALGGLARSNLLAFGLFAALGVLLYRIGRQQQ*
JGI25382J37095_101748551	3300002562	Grasslands Soil	VLGSADALAEKAPLFHALGGLARSNLLAFALFAALGVLLYRIAQRQQ*
JGI25390J43892_101265381	3300002911	Grasslands Soil	GVLGSADALAERVHLYHALGYLPASNALAFGLFAALGALLYGVALRKE*
JGI25390J43892_101512221	3300002911	Grasslands Soil	GSADALAERVPVSHSLGGLPASNALAFGLFAALGALLYWVGLRKE*
JGI25386J43895_100865612	3300002912	Grasslands Soil	LIAGGAICGIVLAAIAGVLGSADALAEKAPLFRALGDIAHSNLLAYGLFLGLGVLLYRIGLRQQ*
Ga0066672_100210682	3300005167	Soil	LIAGGAICGIVLAAVAGVFGSADALAERVPVSQALGGLAHSNVLAYGLFGLLGALLYRIGLREQ*
Ga0066677_105932472	3300005171	Soil	AGGAIGGIVLAAIAGVLGSADALAERVHLYHALGYLPASNALAFGLFAALGALLYGVALRKE*
Ga0066680_102040001	3300005174	Soil	AAIAGVLGSADALAEKVPIFHALGSLAQSSLIAYVLFGALGVLLYRIALRPQ*
Ga0066680_103219091	3300005174	Soil	VLGSADALAERVPVFNALGNVTNSNVLAFGLFGLLGALLYWVGRREQ*
Ga0066673_103833221	3300005175	Soil	GLIAGGAICGIVLAAVAGVLGSADALAERVPVFTALGNLPHSNLLAFGLFGLLGALLYAVGRREQ*
Ga0066679_104450281	3300005176	Soil	AGGAICGIVLAAIAGFLGSADALAEKVPIFHALGSLAQSNLLALVLFAVMGVALYRVASQKS*
Ga0066679_105103841	3300005176	Soil	AGGAICGIVLAAIAGVLGSADALAERVPVSHSLGRLPASNALAFGLFAALGALLYGVALRKE*
Ga0066678_110453122	3300005181	Soil	LGSADALAERVPVFHALGALPDSNLLAFVLFAALGATLYRVALRHE*
Ga0066675_107579542	3300005187	Soil	AGVLGSADALAEKAPLFHALGGLARSNLLAFALFAALGVLLYRIGLRQE*
Ga0066686_102514481	3300005446	Soil	LGSADALAEKAPLFHALGGLARSNLLAFALFAALGVLLYRIGLRKE*
Ga0066689_105914211	3300005447	Soil	GSADALAERLPIFHTLGALADSNVLAFALFVALGALLYRVGSQKS*
Ga0066689_106611021	3300005447	Soil	VLGSADALAEKVAVFHALGGLAQSNVLAYGLFVLLGVLLYQVGMRPQ*
Ga0070706_1012269771	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GAICGIVLAAIAGVLGSADALAEKVPIFHALGSLAQSSLIAYVLFGALGVLLYRIALRPQ
Ga0070698_1007614711	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AIAGVLGSADALAEKAPLFRALGDVAHSNLLAYGLFLGLGVLLYRIGLRQQ*
Ga0070697_1000833561	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ICGIVLAAIAGVLRSADALADKAPLFHALGGLARSNLLAFALFGGLGVLLYRIGLRQQ*
Ga0070697_1005555521	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	SGLIAGGAICGIVLAAIAGFLGSADALAEKVPIFHALGSLAQSNLLALVLFGVMGVALYRVASQKS*
Ga0070704_1005971721	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	FLGSADALAEKLPLFHSIGSLAESNLLAFALFAVLGVTLYRVAKQKA*
Ga0066699_102050071	3300005561	Soil	AAIAGVLGSADALAEKAPLFHALGGLARSNLLAFALFAALGVLLYRIGLRQE*
Ga0066708_103261572	3300005576	Soil	VAGVLGSADALAERVPVFTALGNLPHSNLLAFGLFGLLGALLYAVGRREQ*
Ga0066706_102888511	3300005598	Soil	VLAAIAGVLGSADALAERVHLYHALGYLPASNALAFGLFAALGALLYGVALRKE*
Ga0075289_10032523	3300005888	Rice Paddy Soil	VLGSADALAEQVPVFHALGSVATSNLLAFGLFAALGALLYRIGLRPQ*
Ga0066651_100305131	3300006031	Soil	FSSGLIAGGAICGIVLAGIAGVLGSADALAEKVAVFHALGGLAQSNVLAYGLFVLLGVLLYQVGMRPQ*
Ga0066652_1004197662	3300006046	Soil	AAIAGVLGSADALAERVPVFTALGNLPHSNILAFGLFGLMGALLYWVGRREQ*
Ga0070715_108678301	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	IAGGAICGIVLAAIAGVLGSADALAEKVPIFHALGSLAQSSLIAYVLFGALGVLLYRIALRPQ*
Ga0070716_1003426752	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FSSGLIAGGAICGIVLAAIAGVLGSADALAEKFPVFHALGSLAQSSIIAYVLFVVLGVLLYRIGLRSQ*
Ga0075428_1019824331	3300006844	Populus Rhizosphere	LIAGGAICGIVLAAIAGVLGSADALAEKVPIFRALGGITESNLVAFALFALLAVMLYRVGSKKA*
Ga0075431_1010064701	3300006847	Populus Rhizosphere	AGVLGSADALAEKAKLFQALGSITASNVLAFALFALLGALLYRVASQKS*
Ga0075433_104483231	3300006852	Populus Rhizosphere	FASGLIAGGAICGIVLAAIAGVLGSADALAEKASLFHALGDIAHSKVLAYGLFVALGVILYRIGLRQQ*
Ga0075425_1000188159	3300006854	Populus Rhizosphere	ASGLIAGGAICGIVLAAIAGVLGSADALAEKASLFHALGDIAHSNVLAYGLFVALGVILYRIGLRQQ*
Ga0075425_1001633194	3300006854	Populus Rhizosphere	IAGVLGSADALAEKVPIFHSLGSLAQSSVIAYVLFGALGVLLYRIALRPQ*
Ga0075426_104663392	3300006903	Populus Rhizosphere	AGVLGSADALAEKFPVFHALGSLAQSSILAYVLFVVLGVLLYRIGLRSQ*
Ga0075436_1001185221	3300006914	Populus Rhizosphere	FASGLIAGGAICGIVLAAIAGVLGSADALAEKASLFHALGDIAHSNVLAYGLFVALGVILYRIGLRQQ*
Ga0075436_1015242891	3300006914	Populus Rhizosphere	FASGLIAGGAICGIVLAAIAGVLGSADALAEKAPLFHALGGLARSNLLAFGLFAALGALLYRIGRQQQ*
Ga0079219_113847771	3300006954	Agricultural Soil	GLIAGGAICGIVLAAIAGVLGSADALAEKLPVFRALGALPQSTLVAFGLFAALAALLYRIGLRRQ*
Ga0099793_101930372	3300007258	Vadose Zone Soil	FASGLIPGGAICGIVLAAIAGVLGSANALAEKAPIFHALGSLARSNLLAFALFAALGVLLYRIGLRQQ*
Ga0066710_1013161342	3300009012	Grasslands Soil	VLGSADALAEKAPLFHALGGLARSNLLAFALFAALGVLLYRIGQRQQ
Ga0099828_104808933	3300009089	Vadose Zone Soil	GSADALAARAPLFHVLGAVAESNVVACVLFALLGALLYRVGLQER*
Ga0099827_102559863	3300009090	Vadose Zone Soil	LIAGGAICGIVLAAIAGVLGSADALAEKAPLFRALGGIARSNLLAFALFAALGALLYRIGLRKQ*
Ga0099827_112932752	3300009090	Vadose Zone Soil	AAIAGALGSADALAEKVPIFHALGTLADSNLLAFALFVALGALLYRVASLKS*
Ga0099827_119407772	3300009090	Vadose Zone Soil	GVLGSADALAEKLPVFHALGALPESNLLAFALFGALGAALYRVASQKQ*
Ga0075418_104819723	3300009100	Populus Rhizosphere	ICGIVLAAIAGVLGSADALAEKVPIFRALGGITESNLVAFALFALLAVMLYRVGSKKA*
Ga0066709_1000407156	3300009137	Grasslands Soil	AGGAICGIVLAGIAGVLGSADALAEKVAVFHALGGLAQSNVLAYGLFVLLGVLLYQVGMRPQ*
Ga0114129_109740352	3300009147	Populus Rhizosphere	VLFASGLIAGGAICGIVLAAIAGVLGSADALAEQAPLSRALGGMAHSNVLAFGLFAALGGLLYRIGRQQQ*
Ga0134084_101139902	3300010322	Grasslands Soil	ASGLIAGGAICGIVLAAIAGVLGSADALAERVPVFTALGNLPHSNILAFGLFGLMGALLYWVGRREQ*
Ga0134065_102007392	3300010326	Grasslands Soil	GVLGSADALAERVPVSHSLGRLPASNALAFGLFAALGALLYRVGTRKE*
Ga0134080_100356143	3300010333	Grasslands Soil	FASGLIAGGAICGIVLAAIAGVLGSADALAERVPVFTALGNLPHSIGLAFGLFGLLGALLYWIGLREQ*
Ga0134080_101908142	3300010333	Grasslands Soil	CGIVLAAIAGVLGSADALAEKAPLFHALGGLAGSNLLAFGLFAALGVLLYRIGLRNQ*
Ga0137389_103506801	3300012096	Vadose Zone Soil	AGGAICGIVLAAIAGGMGSADALAARAPLFHALGGLARSNLLAFGLFAALGVLLYRIGLRKE*
Ga0137388_106899181	3300012189	Vadose Zone Soil	GASFPSGLIAGDAIYGIVLPAVAGVLGSADALAERVPVAQALGGLAHSNVLAYGLFGLLGALLYRIGLREQ*
Ga0137383_100650814	3300012199	Vadose Zone Soil	GGAICGIVLAAIAGFLGSADALAEKVPIFHALGSLAQSNLLALVLFAVMGVALYRVASQKS*
Ga0137383_102092491	3300012199	Vadose Zone Soil	GLIAGGAICGIVLAAVAGVLGSADALAERVPVFHALGALPQSNLLAFVLFAGLGATLYGVALRNE*
Ga0137383_105375292	3300012199	Vadose Zone Soil	GVLGSADALAERVPVFSALGDLPHSNVLAFGLFGLLGVLLYSVGRREQ*
Ga0137363_102667501	3300012202	Vadose Zone Soil	ICGIVLAAIAGFLGSADALADKVPIFRALGALAASNVLAVLLFAAMGAVLFRVASQKS*
Ga0137399_107667722	3300012203	Vadose Zone Soil	GIVLAAIAGVLGSADALAERAPLFHALGGLAQSNLLAFALFAALGVLLYRIGLRQQ*
Ga0137380_106524671	3300012206	Vadose Zone Soil	SGLIAGGAICGIVLAAIAGVLGSADALAEKAPLFRALGDIAHSNLLAYGLFLGLGVLLYRIGLRQQ*
Ga0137381_104585562	3300012207	Vadose Zone Soil	LIAGGAICGIVLAAIAGVLGSADALAEKLPIFHALGSLAQSNLLALALFAVMGVALFRVASQKS*
Ga0137376_109022782	3300012208	Vadose Zone Soil	AAIAGVLGSADALAERVHLYHALGHLPASNALAFGLFAALGALLYRVALRKE*
Ga0137387_100189225	3300012349	Vadose Zone Soil	SADALAERVPVFHALGALPQSNLLAFVLFAALGATLYRVALRNE*
Ga0137387_101822483	3300012349	Vadose Zone Soil	AGGAICGIVLAAIAGVLGSADALAEKLPLFHALGALPESTLLAFALFGVMGAVLFRVASQQQ*
Ga0137387_110766671	3300012349	Vadose Zone Soil	AICGIVIAGVAGVLGSADALAEKAPLFHALGGLAQSSLVAYVLFAALGVLLYRIALRPQ*
Ga0137386_105693471	3300012351	Vadose Zone Soil	SGLIAGGAICGIVLAAIAGVLGSADALAEKLPIFHALGSLAQSNLLALALFAVMGVALFRVASQKS*
Ga0137386_107310932	3300012351	Vadose Zone Soil	LAAIAGALGSADALAEKAPLFRALGDIAHSNLLAYGLFLGLGVLLYRIGLRQQ*
Ga0137367_104933772	3300012353	Vadose Zone Soil	GIVLAAIAGVLGSADALAEQVPVFHALGTAASSSVLAFGLFAALGVLLYRIGLRRE*
Ga0137366_101320171	3300012354	Vadose Zone Soil	VLGSADALAEQVPVFHALGTAASSNVLAFGLFAALGVLLYRIGLRRQ*
Ga0137361_103642543	3300012362	Vadose Zone Soil	CGIVLAAIAGVLGSADALAEKAPLFRALGDIAHSNLLAYGLFLGLGVLLYRIGLRQQ*
Ga0137398_103451062	3300012683	Vadose Zone Soil	VLGSADALAEKAPLFRALGDIAHSNLLAYGLFLGLGVLLYRIALRQQ*
Ga0137407_101860241	3300012930	Vadose Zone Soil	SADALAEKAPLFRALGDIAHSNLLAYGLFLGLGVLLYRIGLRQQ*
Ga0137407_107387642	3300012930	Vadose Zone Soil	AICGIVLAAIAGVLGSADALAEKAPLFRALGGVAHSNLLAFGLFAALGALLYRIGLRTE*
Ga0134110_100436923	3300012975	Grasslands Soil	AICGIVLAAVAGVLGSADALAERVPVSHSLGRLPASNALAFGLFAALGALLYRVGLRKE*
Ga0134075_100518193	3300014154	Grasslands Soil	FSSGLIAGGAICGIVLAAVAGVLGSADALSERVPVFHALGALPQSNLLAFVLFAALGATLYRVALRKE*
Ga0137418_110808111	3300015241	Vadose Zone Soil	LGSADALAEKAPLFRALGGIARSNLLAFGLFAALGALLYRIGLRKQ*
Ga0134085_100820791	3300015359	Grasslands Soil	IAGVLGSADALAEKAPLFHALGGLARSNLLAFALFAALGVLLYQIGLRKE*
Ga0134069_10777892	3300017654	Grasslands Soil	CGIVLAAIAGVLGSADALAERVPVFTALGNLPHSNILAFGLFGLMGALLYWVGRREQ
Ga0134069_13100332	3300017654	Grasslands Soil	LGSADALAEKVSLFHALGGLAGSNLLAFGLFAALGVLLYRIGLRNQ
Ga0134083_103321302	3300017659	Grasslands Soil	AGGAICGIVLAAIAGVLGSADALAERVPVFNALGSLPHSNALAFGLFGLLAALLYRVGLREQ
Ga0184608_100176664	3300018028	Groundwater Sediment	FSSGLIAGGAICGIVLAAIAGFLGSADALAEKVPLFHSIGSLAESNLLAFALFAVLGVTLYRVAKQKA
Ga0184618_100500593	3300018071	Groundwater Sediment	SGIVLAAIAGVLGSADALAEKVPLFHALGSIAESNLLAFALFAVLGVTLYRVGSQKE
Ga0184612_104042311	3300018078	Groundwater Sediment	SGLIAGGASCGIVLAAIAGVLGSADALAEKVPLFHALGSITQSNLLAFALFAVLGVTLFRVAKQKS
Ga0066667_100955501	3300018433	Grasslands Soil	GLCLCVARGRIRGTAICGSVLAAIAGVLGSADALAEKLPVFRALGGLAASNALAFGLFVALGAALYQVGMRKE
Ga0066667_112835632	3300018433	Grasslands Soil	GLIAGGAIGGIVLAAIAGVLGSADALAERVHLYHALGHLPASNALAFGLFAALGALLYRVALRKE
Ga0066667_113777151	3300018433	Grasslands Soil	AIAGVLGSADALAEKAPLFHALGGLAGSNLLAFGLFAALGVLLYRIGLRNQ
Ga0066669_111240372	3300018482	Grasslands Soil	CGIVLAAIAGVLGSADALAEKAPLFHALGGVARSNLLAFGLFAALGVLLYRIGLRNQ
Ga0184643_10009722	3300019255	Groundwater Sediment	GIVLAAIAGVLGSADALAERVPVFHALGGLSRSNLLAFGLFGLLGALLYRIGLRKE
Ga0193755_11768502	3300020004	Soil	IAGFLGSADALADNVPIFHALGALATSNLLAVLLFAAMGVVLFRVASQKS
Ga0210379_104099982	3300021081	Groundwater Sediment	SSGLIAGGAICGIVIAGIAGVFGSADALAEKIPLFHALGPIAESNLLAFALFAVLGVTLFRVAKQKS
Ga0137417_11141921	3300024330	Vadose Zone Soil	VLFSSGLIAGGAICGIVLAAIAGVLGSADALAEKVPIFRALGGITESNLVAFALFAVLAVTLYRVGSQKA
Ga0207685_107876952	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AICGIVLAAIAGVLGSADALAEKVPIFHALGSLAQSSLIAYVLFGALGVLLYRIALRPQ
Ga0207684_100840981	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LAAIAGVLGSADALAEKAPLFRALGDIAHSNLLAYGLFLGLGMLLYRIGLRQQ
Ga0207684_112122912	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AIAGVLGSADALAEKVAIFHALGSLAQSSLIAYVLFGALGVLLYRIALRPQ
Ga0207646_102862991	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLFSSGLIAGGAICGIVLAAIAGFLGSADALAEKVPIFHALGSLAQSNLLALVLFGVMGVALYRVASQKS
Ga0208778_10132482	3300026025	Rice Paddy Soil	VLGSADALAEQVPVFHALGSVATSNLLAFGLFAALGALLYRIGLRPQ
Ga0209237_11572811	3300026297	Grasslands Soil	LIAGGAICGIVLAAIAGVLGSADALAEKAPLFRALGDIAHSNLLAYGLFLGLGVLLYRIGLRQQ
Ga0209236_12078702	3300026298	Grasslands Soil	ICGIVLAGVAGVLGSADALAERVPVFNALGSLPHSNALAFGLFGLLAALLYRVGLREQ
Ga0209238_12718821	3300026301	Grasslands Soil	CGIVLAAIAGVLGSADALAERAPVFRALGELVHSNLLAFGLFAALGVLLYRVGLRKQ
Ga0209468_11078712	3300026306	Soil	SGLIAGGAICGIVLAAIAGVLGSADALAEKAPLFRALGDIAHSNLLAYGVFLGLGVLLYRIGLRQQ
Ga0209468_11862742	3300026306	Soil	LAAMAGVLGSADALAEKAPLFHALGGLAGSNLLAFGLFAALGVLLYRIGLRNQ
Ga0209265_10455281	3300026308	Soil	AGGAICGIVLAAIAGVLGSADALAEKAPLSRALGDIAHSNLLAYGLFLGLGVLLYRIGLRQQ
Ga0209686_100073615	3300026315	Soil	SGLIAGGAICGIVLAAIAGDLGSADALAERVPVSHSLGGLPASNALAFGLFAALGALLYWVGLRKE
Ga0209155_10122645	3300026316	Soil	GSADALAEKLPVFRALGGLAASNALAFGLFVALGAALYQVGMRKE
Ga0209472_10526733	3300026323	Soil	SGLIAGGAICGIVLAAIAGVLGSADALAEKVSLFHALGGVAGSNLLAFGLFAALGVLLYRIGLRNQ
Ga0209470_100109322	3300026324	Soil	LFSSGLIAGGAICGIVLAAIAGVLGSADALAERVPVFTALGNLPHSNILAFGLFGLMGALLYWVGRREQ
Ga0209802_13262632	3300026328	Soil	GAICGIVLAAVAGVLGSADALAERVPVFNALGNVTNSNVLAFGLFGLLGALLYWVGRREQ
Ga0209808_11410621	3300026523	Soil	LFASGLIAGGAICGIVLAAIAGVLGSADALAEKAPLFHALGGVARSNLLAFGLFAALGVLLYRIGLRNQ
Ga0209376_14111421	3300026540	Soil	GVLGSADALAEKVAVFHALGGLAQSNVLAYGLFVLLGVLLYQVGMRPQ
Ga0209805_10502811	3300026542	Soil	CGIVLAAVAGVLGSADALAERVPVFTALGDLPHSNILAFGLFGLLGVLLYSVGRREQ
Ga0209161_101328211	3300026548	Soil	ICGIVLAAIAGVLGSADALAERVHLYRALGHLPASNALAFGLFAALGAVLYRVGMRKE
Ga0208981_10713751	3300027669	Forest Soil	LAAIAGVLGSADALAERAPLFHALGGLARSNLLAFALFAALGVLLYRIGLRQQ
Ga0209283_103906322	3300027875	Vadose Zone Soil	GAICGIVLAAIAGVLGSADALAEKAPLFHALGGLARSNLLAFVLFAALGVLLYRIGLRKE
Ga0209590_103674681	3300027882	Vadose Zone Soil	AGGAICGIVLAAIAGVLGSADALAEKAPLFRALGGIARSNLLAFALFAALGALLYRIGLRKQ
Ga0308187_103921151	3300031114	Soil	ICGIVLAAIAGVLGSADALAEKVPLFHALGSITESNLLAFALFAVLGVTLYRVGSQKS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077821

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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