Basic Information | |
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Family ID | F077766 |
Family Type | Metagenome |
Number of Sequences | 117 |
Average Sequence Length | 45 residues |
Representative Sequence | LIINNLNGIKTQLWDTQKNIEEDVKLAQKKEELEKETRKDSLL |
Number of Associated Samples | 64 |
Number of Associated Scaffolds | 117 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 8.93 % |
% of genes near scaffold ends (potentially truncated) | 22.22 % |
% of genes from short scaffolds (< 2000 bps) | 69.23 % |
Associated GOLD sequencing projects | 54 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.50 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (83.761 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (42.735 % of family members) |
Environment Ontology (ENVO) | Unclassified (60.684 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (92.308 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.50 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Seawater Surface Seawater Seawater Marine Marine Marine Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
GOS24894_104673014 | 3300002033 | Marine | LLIYILSDIKIELWDIRKNIEEDEKLAQKKEGPEKEIKKDSQ |
Ga0066867_100600981 | 3300005400 | Marine | LIINILSDIKIKLWDIQKNTEEDVKSAQKKEELEKETRKDSLAYNGNNNSN* |
Ga0066867_100710151 | 3300005400 | Marine | LISNYLNDIKTQLWDTQKNIEEDVKLAQKKDGLEKEIRKDSLTQNGTKNSN* |
Ga0066856_100113682 | 3300005404 | Marine | LKINILNDIKIKLWDTRKNIEEDVKLVQKKEEPEEETRKDSLVR* |
Ga0066856_104763252 | 3300005404 | Marine | LIINILSDIKIKLWGIQKNTEEDVKSAQKKEELEKETRKDSLAYNGNNNSN* |
Ga0066851_100730801 | 3300005427 | Marine | LIINILSDIKIKLWDIQKNTEEDVKSAQKKEELEKETRKD |
Ga0066851_101342082 | 3300005427 | Marine | LINNYLNDIKTQLWDTQKNIEEDVKLAQKKEELEKETKKDSLP* |
Ga0066863_100260963 | 3300005428 | Marine | LINNYLNDIKTQLWDTQRNIEEDVKLAQKKDGLEKEIRKDSLTQNETKNSN* |
Ga0066863_102192292 | 3300005428 | Marine | LIINNLNDIKIELWDTPRNIEEDEKSAQRKDGLEKETRKDSSV* |
Ga0066846_103129231 | 3300005429 | Marine | LISNYLNDIKTQLWDTQRNIEEDVKLAQKKDGLEKEIRKDSLTQNGTKNSN* |
Ga0066849_100273112 | 3300005430 | Marine | LIINILSDIKIKLWDIQKNTEEDVKSAQKKEGLEKETRKDSLAYNGNNNSN* |
Ga0066866_100710581 | 3300005514 | Marine | IKTQLWDTQKNIEEDVKLAQKKDGLEKEIRKDSLTQNGTKNSN* |
Ga0066861_100509802 | 3300005522 | Marine | LIINILSDIRIKLWDTQKNIEEDVKSAQKREELEKETRKDSLA* |
Ga0066861_101180371 | 3300005522 | Marine | LKINILNDIKIKLWDTRKNIEEDVKLVQKKEEPEEETRKDSLV |
Ga0066837_101161552 | 3300005593 | Marine | LIINNLNGIKTQLWDTQKNIEEDVKLAQKKEELEKETKKDSLP* |
Ga0066850_101469032 | 3300005605 | Marine | LINNYLNDIKTQLWDTQKNIEEDVKLAQKKDGLEKEIRKDSLTQNETKNSN* |
Ga0066836_104607992 | 3300006166 | Marine | LIIDILSDIKIKLWDIQKSTEEDERLAQKKEELEKETRKDNLS* |
Ga0066836_109199311 | 3300006166 | Marine | LKINILNDIKIKLWDTQKNIEEDVKLVQKKEEPEEETRKDSLVH* |
Ga0068486_13763962 | 3300006329 | Marine | LKNNILNDTKLLIWDIQKNIEEDVKSARKKEELEEETRKDKSS* |
Ga0066372_100904702 | 3300006902 | Marine | LLINNLNDIKTKLWDTQKNIEEDVRSAQKKEGLEKEIRKDSLA* |
Ga0066366_100100842 | 3300007283 | Marine | LIINNLSGIKTQLWDTQKNIEEDVKLAQKKEELEKETRKDSLL* |
Ga0105012_10671173 | 3300007509 | Marine | LISNYLNDIRTQLWDTQKNIEEDVKSAQKKDELEKEIKEDSLTQNGTKNSN* |
Ga0105020_100133625 | 3300007514 | Marine | LIINNLNDIKIELWDIQKSTEEDEKSAQKKEGLEKEIKKDN* |
Ga0105020_101259512 | 3300007514 | Marine | LIINSLNDIRIKLWDIQKNIGEEEKLAQKKEGLEKETRKDNSF* |
Ga0105020_10341642 | 3300007514 | Marine | LISNYLNDIKTQLWDTQKNIEEDVKSAQKKDELEKEIKKDSLTQNGTKNSN* |
Ga0105020_10685432 | 3300007514 | Marine | LIINNLNGIKTQLWDTQKNTEEDVKSAQKKEELEKETRKDSLAYNGNNNSN* |
Ga0105020_11418182 | 3300007514 | Marine | LIINNLNDIKIELWDTQKNIEEDVKSAQKKEELEEEIKKDSLAKDGTKNSN* |
Ga0105020_12025073 | 3300007514 | Marine | NNYLNDIKTELWDTQKNIEEDVKSAQKKDGLEKETKKDSLTQNGTKNSN* |
Ga0105021_10163282 | 3300007515 | Marine | LISNYLNDIRTQLWDTQKNIEEDVKSAQKKDGLEKEIRKDSLTQNGTKNSN* |
Ga0105021_11479983 | 3300007515 | Marine | LINNYLNDIKTELWDTQKNIEEDVKSAQKKDGLEKETKKDSLTQNGTKNSN* |
Ga0111541_100370881 | 3300008097 | Marine | LIIISLNDIKIKLWDTQKNIEEDAKSAQKKEELEKEIRKDNLA* |
Ga0111541_100721972 | 3300008097 | Marine | LIIKNLNDIKIKLWDTQKSIEAEEKSAQKKEELEKEIRKDNSV* |
Ga0111541_101347142 | 3300008097 | Marine | LKNNILNDIKIKLWDIQKNIEEDVRSVPKKEELEKETKRNSLKF* |
Ga0111541_101527092 | 3300008097 | Marine | LIINCLNDIKTKLWDTQKNIEEDVKSAQRKEGLEKETRKDRLA* |
Ga0111541_102027322 | 3300008097 | Marine | LIINNLNDNRVLIWDIQKNIGEEEKSAQKKDELEKETKKDSPN* |
Ga0111541_103251151 | 3300008097 | Marine | LLINSLNDIKTKLWDTQKNIEEDEKSALKKEELEKETRKDSFV* |
Ga0115663_100070112 | 3300008740 | Marine | LIINNLNDIKTQLWDTQKNIEEDVKLAQKKEELEKETRRDSLPQQWN* |
Ga0115663_10257842 | 3300008740 | Marine | LIINYLNGIRIKLWDTQKNIEEDVKSAQKKEELEKETRKDSLAYNGNNNSN* |
Ga0117902_11269155 | 3300009104 | Marine | LFELIINNLNGIKTQLWDTQKNTEEDVKSAQKKEELEKETRKDSLAYNGNNNSN* |
Ga0117902_14466442 | 3300009104 | Marine | LIINNLNDIKIPLWDTQKNIEEDVKLAQKKEELEEEIRKDSLV* |
Ga0117902_17064292 | 3300009104 | Marine | LIINNLNGIKTQLWDTQKNIEEDVKLAQKKEGLEKETRKDSLPQQWN* |
Ga0117920_11507111 | 3300009108 | Marine | LISNYLNDIRTQLWDTQKNIEEDVKSAQKKDELEKEIKE |
Ga0117925_10393333 | 3300009110 | Marine | DIRTQLWDTQKNIEEDVKSAQKKDELEKEIKEDSLTQNGTKNSN* |
Ga0118730_10843583 | 3300009132 | Marine | LIINNLNGIKTQLWDTQKNTEEDVKSAQKKEELEKETRKDSLACNGNNNSN* |
Ga0118730_12251972 | 3300009132 | Marine | LIINNLNGIKTQLWDTQKNIEEDVKLAQKKEELEKETRRDSLPQQWN* |
Ga0117928_11270812 | 3300009339 | Marine | LIINNLNGIKTQLWDTQKNTEEDVKSAQKKEELEKETRKDSLTYNGNNNSN* |
Ga0114932_105324401 | 3300009481 | Deep Subsurface | LWDIQKNIEADVKLAQKKEEPEKEIKKDSLDYNGNNNSN* |
Ga0114932_106380641 | 3300009481 | Deep Subsurface | LIINILSDIKIKLWDTQKNIEEDVKSAQKKEELEKETRKDNLA |
Ga0114932_108740961 | 3300009481 | Deep Subsurface | LIINYLSDIRIKLWDTQKNIEEDVKSAQKKDELEKETRKDSLA* |
Ga0115011_106953162 | 3300009593 | Marine | LIINNLNDIRTRLWDTQKNIEEDVKSAQKREELEKETRKDSLA* |
Ga0114933_101750052 | 3300009703 | Deep Subsurface | LIINNLNGIKTQLWDTQKNIEEDVKLAQKKEELEKETRKDSLL* |
Ga0115012_119184672 | 3300009790 | Marine | IKTQLWDTQKNTEEDVKSAQKKEELEKETRKDSLAYNGNDNSN* |
Ga0163110_109484301 | 3300012928 | Surface Seawater | MVIKSKLWVIQKNIEEDEKSAQKKEGQEKEINESSLKFNGIQNSN* |
Ga0163108_100100631 | 3300012950 | Seawater | LIINILSDIKIKLWDIQKNTGEDVKSAQKKEELEEETRKDSLVH* |
Ga0163108_102810782 | 3300012950 | Seawater | LIINILNGIRINLWDTQRNIEEDVKLAQKKEGLEKETKKDNPSCNGINNSN* |
Ga0163108_108145962 | 3300012950 | Seawater | LINNYLNDIKTQLWDTQKNIEEDVKLAQKKDGLEKEIRKDSLTQNGTKNSN* |
Ga0171646_10705482 | 3300013116 | Marine | LIINNLNGIKTQLWDTQRNIEEDVKSAQKKEELEKETRKDSLACNGNNNSN* |
Ga0211671_10710752 | 3300020270 | Marine | NDIKTKLWDTQKNIEEDEKSALKKEELEKETRKDSFV |
Ga0211502_10345842 | 3300020332 | Marine | IINNLNGIKTQLWDTQKNTEEDVKSAQKKEELEKETRKDSLACNGNNNSN |
Ga0211613_10777842 | 3300020353 | Marine | LINNYLNDIKTQLWDTQKNIEEDVKSAQKKDELEKEIKKDSLTQNGTKNSN |
Ga0211613_11084941 | 3300020353 | Marine | LIINNLSGIKTQLWDTQKNIEEDVKLAQKKEELEKETRKDSLL |
Ga0211612_11415281 | 3300020356 | Marine | LFELIINNLNGIKTQLWDTQKNIEEDVKLAQKKEELEKEIKKDSLTQNGTKNSN |
Ga0211610_10078214 | 3300020359 | Marine | LINNYLNDIKTQLWDTQKNIEEDVKSAQKKEELEKE |
Ga0211672_100352902 | 3300020370 | Marine | LIINYLNGIRIKIWDIQKNIEEDVKLAQKKEELEKEIKKDSLI |
Ga0211672_100462642 | 3300020370 | Marine | LLINSLNDIKTKLWDTQKNIEEDEKSALKKEELEKETRKDSFV |
Ga0211672_101005832 | 3300020370 | Marine | LKNNYLNGIKIILWDIQKNTEEDVRLAQKKEELEKEIRDDSLPNKWN |
Ga0211672_102028631 | 3300020370 | Marine | LLFKLISNYLNDIKTKIWDTQKNIEEDVKLAQKKDGLEKEIRKDSLTQNGTKNSN |
Ga0211660_100533642 | 3300020373 | Marine | LINNYLNDIKTQLWDTQKNIEEDVKLAQKKDGLEKEIRKDSLTQNETKNSN |
Ga0211477_100447452 | 3300020374 | Marine | LIINYLSDIRIKLWDTQKNIEEDVKSAQKKDELEKETRKDSLA |
Ga0211656_102264312 | 3300020375 | Marine | LIINILSDIKIKLWDIQKNTEEDVKSAQKKEELEKETRKDSLAYNGNNNSN |
Ga0211476_101864661 | 3300020381 | Marine | LKNNILNDIKIKLWDIQKNIEEDVRSVPKKEELEKETKRNSLKF |
Ga0211557_100172865 | 3300020418 | Marine | LIINNLNDIKIQLWDTQKNTEEDVKLAQKKEGLEKEIRKDSLI |
Ga0211557_100594052 | 3300020418 | Marine | LIINNLNGIRIKLWDIQKNIEEDVKLVQKKEEPEKEIRRDSIRLKWKQ |
Ga0211557_100605532 | 3300020418 | Marine | LIIKNLNDIKIKLWDTQKNIEAEEKSAQKKEELEKETRKDNSV |
Ga0211556_101331741 | 3300020432 | Marine | LIINNLNGIKTQLWDTQKNIEEDVKLAQKKEELEKETREDSLP |
Ga0211556_103145851 | 3300020432 | Marine | LKINILSDIKIKLWDTQKNIEEDVKLVQRKEEPEEETRRDSQLR |
Ga0211556_103466131 | 3300020432 | Marine | LIINNLNDIKIQLWDTQKNTEEDVKLAQKKEGLEKEIKKDSLI |
Ga0211564_1000207310 | 3300020445 | Marine | LIINILSDIRIKLWDTQKNIEEDVKSAQKREELEKETRKDSLA |
Ga0211564_100253734 | 3300020445 | Marine | LKINILNDIKIKLWDTRKNIEEDVKLVQKKEEPEEETRKDSLVR |
Ga0211564_103035252 | 3300020445 | Marine | LKINILNDIKIKLWDTQKNIEEDVKLVQKKEEPEEE |
Ga0211638_100497071 | 3300020448 | Marine | LKNNYLNGIKIILWDIQKNTEEDVRSAQKKEGLEKEIRDDSLPKKWN |
Ga0211638_101582052 | 3300020448 | Marine | LIINCLNDIKTKLWDTQKNIEEDVKSAQRKEGLEKEIRKDRL |
Ga0211638_104403671 | 3300020448 | Marine | DIQKNTEEDEKLAQKKEGLEKETRGSSLKLNGVQNSN |
Ga0211551_101868141 | 3300020456 | Marine | LIIISLNDIKIKLWDTQKNIEEDVKSAQKKEELEKEIRKDSLTCNGT |
Ga0211643_105448032 | 3300020457 | Marine | LIINNLNGIKTQLWDTQKNTEEDVKSAQKKEELEKETRKDSLAYNGNNNSN |
Ga0211546_103641622 | 3300020462 | Marine | LKINILNDIKIKIWDTQKNIEEDVKLVQKKDEPEEETRKDSLVR |
Ga0211640_100076041 | 3300020465 | Marine | IKLWDTQKSIEEDVKLAQKKEELEKEIKKDSLTQNGTKNSN |
Ga0211640_102444251 | 3300020465 | Marine | LIINSLNGNRIKLWDTQKSIEEDVKLAQKKEELEK |
Ga0211640_102578181 | 3300020465 | Marine | LIINYLSDIRIKLWDTQKNIEEDVKSAQKKDELEK |
Ga0211640_105005842 | 3300020465 | Marine | LIIINLNDIKIKLWDTQKSIEEDVKLAQKKEELEK |
Ga0211640_106087112 | 3300020465 | Marine | LIINYLNGIRIKIWDIQKNIEEDVKLAQKKEELEKEIKKD |
Ga0211713_100229441 | 3300020467 | Marine | LIINCLNDIKTKLWDTQKNIEEDVKSAQRKEGLEKEIRKDRLA |
Ga0211713_101385991 | 3300020467 | Marine | LIINNLNDNRVLIWDIQKNIGEEEKSAQRKDELEKETKKDSPN |
Ga0211713_102103472 | 3300020467 | Marine | LIIHYLNDIRIKLWDTQKSIEEDVRLALRKEELEEETKKDSLPLQWN |
Ga0211713_102390181 | 3300020467 | Marine | KLIINILNDIRIKLWDTQKNTEEDEKLALKKEELEKEIRKDSLS |
Ga0211713_106060911 | 3300020467 | Marine | LIIEDLNDIRIKIWDIQKNIEEEERLAQKKEELEKETRRDNSF |
Ga0211475_100034137 | 3300020468 | Marine | LKNNYLNGIKIILWDTRKNIEEDVRSAQKKEELEKEIRDDSLPKKWN |
Ga0211543_105853181 | 3300020470 | Marine | NNLNDIKIKLWDTQKNIEEDVRLARRKEELEEEIKKDSLI |
Ga0211614_100868162 | 3300020471 | Marine | LIIHYLNDIRIKLWDTQKSIEEDVRLAQKKEELEEETKKDSLPLQWN |
Ga0211625_1000130023 | 3300020473 | Marine | LIINSLNGNRIKLWDTQKSIEEDVKLAQKKEELEKEIKKDSLTQNGTKNSN |
Ga0211625_1000181412 | 3300020473 | Marine | LIINILSDIKIKLWDTQKNIEEDVKSAQKKEELEKETRKDNLAYNGNNNSN |
Ga0211625_100075303 | 3300020473 | Marine | LKINNLNGIKNQLWDTQKNIEEDVKLAQKKEGLEKEIKKDSTS |
Ga0211625_101510311 | 3300020473 | Marine | LKNNYLNGIKIILWDIQKNTEEDVRLAQKKEELEKEIRDDS |
Ga0211715_101990941 | 3300020476 | Marine | LIINYLNGIKIKLWDTQKNIEEDVKSAQKKEELEKETRKDSLTYNGNNNSN |
Ga0211503_1000146413 | 3300020478 | Marine | LIINNLNDIKIELWDTQKNIEEDVKSAQKKEELEEEIKKDSLAKDGTKNSN |
Ga0211503_1000146713 | 3300020478 | Marine | LIINNLNDIRIKLWDIQKNIGEEEKLAQKKEGLEKETRKDNSF |
Ga0211503_104236591 | 3300020478 | Marine | ELIINNLNDIKIPLWDTQKNTEEDVKLAQKKEELEEEIRKDSLV |
Ga0208261_10070393 | 3300026076 | Marine | LIIISLNDIKIKLWDTQKNIEEDVKSAQKKEELEKEIRKDNLA |
Ga0208261_10390402 | 3300026076 | Marine | LIIKNLNDIKIKLWDTQKSIEAEEKSAQKKEELEKEIRKDNSV |
Ga0208261_11445842 | 3300026076 | Marine | LIINCLNDIKTKLWDTQKNIEEDVKSAQRKEGLEKETRKDRLA |
Ga0208894_11925581 | 3300026200 | Marine | LISNYLNDIKTQLWDTQRNIEEDVKLAQKKDGLEKEIRKDSLTQNETKNSN |
Ga0208411_10247662 | 3300026279 | Marine | LISNYLNDIKTQLWDTQKNIEEDVKLAQKKDGLEKEIRKDSLTQNETKNSN |
Ga0208764_104857232 | 3300026321 | Marine | LIIDILSDIKIKLWDIQKSTEEDERLAQKKEELEKETRKDNLS |
Ga0209034_100312373 | 3300027755 | Marine | LIINNLNGIKTQLWDTQKNIEEDVKLAQKKEELEKETRKDSLL |
Ga0209404_111105332 | 3300027906 | Marine | NILSDIRIKLWDTQKNIEEDVKSAQKREELEKETRKDSLA |
Ga0310344_100556062 | 3300032006 | Seawater | LIINNLNGIKTQLWDTQKNIEEDVKLAQKKEELEKETRRDSLPQQWN |
Ga0310344_102296001 | 3300032006 | Seawater | LINNYLNDIKTQLWDTQKNIEEDVKSAQKKDELEKEIKKDS |
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