Metagenome Family F077758

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077758
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	47 residues
Representative Sequence	MRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQLVSRFKRARTRR
Number of Associated Samples	85
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.80 %
% of genes near scaffold ends (potentially truncated)	27.35 %
% of genes from short scaffolds (< 2000 bps)	91.45 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.282 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.513 % of family members)
Environment Ontology (ENVO)	Unclassified (35.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.00% β-sheet: 0.00% Coil/Unstructured: 44.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF05697	Trigger_N	49.57
PF12729	4HB_MCP_1	31.62
PF04234	CopC	7.69
PF05698	Trigger_C	3.42
PF05425	CopD	1.71
PF02203	TarH	0.85
PF12697	Abhydrolase_6	0.85
PF04545	Sigma70_r4	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	52.99
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	7.69
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.71
COG1276	Putative copper export protein	Inorganic ion transport and metabolism [P]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.28 %
Unclassified	root	N/A	48.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.28 %
Unclassified	root	N/A	48.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.28 %
Unclassified	root	N/A	48.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.72 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	40.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.72 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.72 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	12.82 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	2.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.72 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	12.82 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.71 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.72 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	4.27 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	1.71 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.71 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.85 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.72 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	4.27 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	1.71 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.71 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.85 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118725718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	589	Open in IMG/M
3300004479\|Ga0062595_101747363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	588	Open in IMG/M
3300004643\|Ga0062591_101046190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	781	Open in IMG/M
3300005327\|Ga0070658_10418803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1152	Open in IMG/M
3300005327\|Ga0070658_10597251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	957	Open in IMG/M
3300005334\|Ga0068869_100722479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	851	Open in IMG/M
3300005347\|Ga0070668_102268429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	502	Open in IMG/M
3300005441\|Ga0070700_100040576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2850	Open in IMG/M
3300005548\|Ga0070665_101208914	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005718\|Ga0068866_10145257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1367	Open in IMG/M
3300005718\|Ga0068866_10273797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1043	Open in IMG/M
3300006169\|Ga0082029_1208893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	526	Open in IMG/M
3300006169\|Ga0082029_1404175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	613	Open in IMG/M
3300006169\|Ga0082029_1443546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	576	Open in IMG/M
3300006804\|Ga0079221_10570354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	755	Open in IMG/M
3300006844\|Ga0075428_101589167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	684	Open in IMG/M
3300006876\|Ga0079217_10480482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	765	Open in IMG/M
3300006876\|Ga0079217_10927845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	625	Open in IMG/M
3300006894\|Ga0079215_11168590	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300006894\|Ga0079215_11301474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	561	Open in IMG/M
3300007004\|Ga0079218_11826681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	682	Open in IMG/M
3300007004\|Ga0079218_12105591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	650	Open in IMG/M
3300007004\|Ga0079218_13662086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	522	Open in IMG/M
3300009147\|Ga0114129_12281536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	650	Open in IMG/M
3300009148\|Ga0105243_10866079	Not Available	896	Open in IMG/M
3300009176\|Ga0105242_12008366	Not Available	621	Open in IMG/M
3300009177\|Ga0105248_11256831	Not Available	837	Open in IMG/M
3300009553\|Ga0105249_11970941	Not Available	657	Open in IMG/M
3300009789\|Ga0126307_10311199	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300009789\|Ga0126307_10408597	Not Available	1095	Open in IMG/M
3300009789\|Ga0126307_10946259	Not Available	696	Open in IMG/M
3300009789\|Ga0126307_11176582	Not Available	620	Open in IMG/M
3300009840\|Ga0126313_10025347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4003	Open in IMG/M
3300009840\|Ga0126313_10191742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1565	Open in IMG/M
3300009840\|Ga0126313_10619701	Not Available	873	Open in IMG/M
3300009840\|Ga0126313_11600758	Not Available	542	Open in IMG/M
3300010036\|Ga0126305_10485051	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300010039\|Ga0126309_10280324	Not Available	956	Open in IMG/M
3300010039\|Ga0126309_10419338	Not Available	806	Open in IMG/M
3300010039\|Ga0126309_10478890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300010040\|Ga0126308_10035876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	2802	Open in IMG/M
3300010040\|Ga0126308_10454579	Not Available	861	Open in IMG/M
3300010040\|Ga0126308_11241214	Not Available	528	Open in IMG/M
3300010042\|Ga0126314_10891026	Not Available	657	Open in IMG/M
3300010044\|Ga0126310_10956464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300010045\|Ga0126311_11004677	Not Available	682	Open in IMG/M
3300010166\|Ga0126306_11130592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	642	Open in IMG/M
3300010399\|Ga0134127_10957008	Not Available	914	Open in IMG/M
3300010399\|Ga0134127_12391421	Not Available	608	Open in IMG/M
3300012186\|Ga0136620_10519469	Not Available	504	Open in IMG/M
3300012897\|Ga0157285_10123166	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012908\|Ga0157286_10090485	Not Available	878	Open in IMG/M
3300012951\|Ga0164300_10122104	Not Available	1179	Open in IMG/M
3300012986\|Ga0164304_10828759	Not Available	717	Open in IMG/M
3300014326\|Ga0157380_12519279	Not Available	580	Open in IMG/M
3300014488\|Ga0182001_10492748	Not Available	561	Open in IMG/M
3300015077\|Ga0173483_10374887	Not Available	722	Open in IMG/M
3300015373\|Ga0132257_100732180	Not Available	1231	Open in IMG/M
3300015374\|Ga0132255_104184040	Not Available	612	Open in IMG/M
3300017787\|Ga0183260_10002551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	15038	Open in IMG/M
3300017792\|Ga0163161_10931079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	738	Open in IMG/M
3300018061\|Ga0184619_10263412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	792	Open in IMG/M
3300018422\|Ga0190265_10081901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2958	Open in IMG/M
3300018422\|Ga0190265_10300881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1674	Open in IMG/M
3300018422\|Ga0190265_13037716	Not Available	560	Open in IMG/M
3300018422\|Ga0190265_13349255	Not Available	535	Open in IMG/M
3300018429\|Ga0190272_10719101	Not Available	903	Open in IMG/M
3300018432\|Ga0190275_10166190	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300018432\|Ga0190275_11434157	Not Available	767	Open in IMG/M
3300018432\|Ga0190275_12000934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	658	Open in IMG/M
3300018469\|Ga0190270_10372089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1309	Open in IMG/M
3300018469\|Ga0190270_10477048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300018481\|Ga0190271_13182840	Not Available	550	Open in IMG/M
3300018910\|Ga0193598_1031736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1309	Open in IMG/M
3300018939\|Ga0193593_1171378	Not Available	516	Open in IMG/M
3300019377\|Ga0190264_10662179	Not Available	761	Open in IMG/M
3300019377\|Ga0190264_11244214	Not Available	623	Open in IMG/M
3300020005\|Ga0193697_1121505	Not Available	607	Open in IMG/M
3300020181\|Ga0196958_10014008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2244	Open in IMG/M
3300020181\|Ga0196958_10220419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	681	Open in IMG/M
3300021184\|Ga0196959_10142137	Not Available	582	Open in IMG/M
3300021415\|Ga0193694_1020174	Not Available	920	Open in IMG/M
3300022756\|Ga0222622_10835266	Not Available	674	Open in IMG/M
3300024430\|Ga0196962_10035419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	1500	Open in IMG/M
3300025899\|Ga0207642_10129151	Not Available	1316	Open in IMG/M
3300025901\|Ga0207688_10095510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1711	Open in IMG/M
3300025901\|Ga0207688_10578809	Not Available	707	Open in IMG/M
3300025925\|Ga0207650_11594239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300025935\|Ga0207709_10294115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1205	Open in IMG/M
3300025938\|Ga0207704_11036160	Not Available	695	Open in IMG/M
3300026035\|Ga0207703_11476069	Not Available	654	Open in IMG/M
3300026121\|Ga0207683_10101306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2571	Open in IMG/M
3300026121\|Ga0207683_11975304	Not Available	532	Open in IMG/M
3300027909\|Ga0209382_11847599	Not Available	586	Open in IMG/M
3300028589\|Ga0247818_10322543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1030	Open in IMG/M
3300028592\|Ga0247822_10820933	Not Available	759	Open in IMG/M
3300028596\|Ga0247821_10568398	Not Available	728	Open in IMG/M
3300028597\|Ga0247820_10248291	Not Available	1149	Open in IMG/M
3300028608\|Ga0247819_11030778	Not Available	522	Open in IMG/M
3300028881\|Ga0307277_10030981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2130	Open in IMG/M
3300030336\|Ga0247826_11243054	Not Available	598	Open in IMG/M
3300031548\|Ga0307408_102209736	Not Available	532	Open in IMG/M
3300031731\|Ga0307405_11949553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300031731\|Ga0307405_12148175	Not Available	502	Open in IMG/M
3300031852\|Ga0307410_10437529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1064	Open in IMG/M
3300031901\|Ga0307406_10384339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1108	Open in IMG/M
3300031903\|Ga0307407_10621005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	807	Open in IMG/M
3300031911\|Ga0307412_10941579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300031938\|Ga0308175_100118497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2478	Open in IMG/M
3300031939\|Ga0308174_11643283	Not Available	552	Open in IMG/M
3300031996\|Ga0308176_12069572	Not Available	608	Open in IMG/M
3300032004\|Ga0307414_10305984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1347	Open in IMG/M
3300032080\|Ga0326721_10293968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	903	Open in IMG/M
3300032080\|Ga0326721_10298184	Not Available	897	Open in IMG/M
3300032080\|Ga0326721_11021281	Not Available	529	Open in IMG/M
3300033551\|Ga0247830_11503199	Not Available	539	Open in IMG/M
3300034000\|Ga0334918_037436	Not Available	681	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.09%
Host-Associated	Host-Associated	29.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	29.91%
Aquatic	Environmental → Aquatic	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.11%
Freshwater	Environmental → Aquatic → Freshwater	1.71%
Sediment	Environmental → Aquatic → Sediment	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Sand	Environmental → Terrestrial → Soil → Sand	5.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.27%
Ice	Environmental → Aquatic → Freshwater → Ice	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%
Loam	Environmental → Terrestrial → Soil → Loam	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.71%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	5.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.51%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	16.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.27%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.42%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	2.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.56%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034000	Biocrust microbial communities from Mojave Desert, California, United States - 14HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1187257182	3300002568	Soil	MRSRLAARFYTGPAGHLVAGIADWAELLARWKWSQMVSHFKRGPSGR*
Ga0062595_1017473631	3300004479	Soil	MRSRLLARFYTGPAGHLVAGVADWAELLVRWKWSQMVSRFKRAPTRR*
Ga0062591_1010461902	3300004643	Soil	MRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQLVSRFKRARTRR*
Ga0070658_104188032	3300005327	Corn Rhizosphere	VRSRLAARFYTGPLGHLVAGVADWAELLVRWKCSRLVSRFKRARTRR*
Ga0070658_105972511	3300005327	Corn Rhizosphere	VRSRLAARYYTGPVGHLVAGIADWGELLARWKWSQLVSRFKRARSRR*
Ga0068869_1007224791	3300005334	Miscanthus Rhizosphere	VRSRLAARFYTGPIGHLVAGVADWAELLVRWKCSRLVSRFKRARTRR*
Ga0070668_1022684291	3300005347	Switchgrass Rhizosphere	SEAMAQSLYKPRGMRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQMVSRFKRARTRR
Ga0070700_1000405764	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQMVSRFKRARTRR*
Ga0070665_1012089142	3300005548	Switchgrass Rhizosphere	MRSRLAARFYTGPTGHFVAGVADWAELLARWKWSQLVSRFKRARTRR*
Ga0068866_101452571	3300005718	Miscanthus Rhizosphere	LGHLVAGVADWAELLVRWKCSRLVSRFKRARTRR*
Ga0068866_102737971	3300005718	Miscanthus Rhizosphere	VRSRLAARYYTGPVGHLVAGIADWGELLVRWKWSRLVSRFKRARTGR*
Ga0082029_12088931	3300006169	Termite Nest	SRLAARYYTGPLGHLVAGIADWGELLVRWKCSRLVSRFKRARTRR*
Ga0082029_14041752	3300006169	Termite Nest	MRSRLLARYYTGPLGHLVAGVADWAELLARWTWQRLRERFKARGPRR*
Ga0082029_14435462	3300006169	Termite Nest	VRSRLAARFYTGPLGHLVAGVADWGELLVRWQWSRVRERFKRTPHTPRG*
Ga0079221_105703542	3300006804	Agricultural Soil	MRSRLLARFYTGPAGHLVAGLADWAELLVRWKWSRLVSHFKRTDTGR*
Ga0075428_1015891672	3300006844	Populus Rhizosphere	VRSRLAARFYTGPVGHLVAGVADWAELLARWKWAQMRERYRRARAGR*
Ga0079217_104804822	3300006876	Agricultural Soil	MAVSLYKPLVVRSRLAARFYTGPTGHLVAGAADWAELLVRWKWSQMVSRFKRGGTGR*
Ga0079217_109278452	3300006876	Agricultural Soil	VRSRLAARFYTGPVGHLAAGIADWAGLLARWQWSRARERYRRARTRRDPARET
Ga0079215_111685902	3300006894	Agricultural Soil	VRSRLAARFYTGPLGHLVAGVADWGELLARWKWSQLAARFKRGRTRR*
Ga0079215_113014742	3300006894	Agricultural Soil	SRLAARFYTGPTGHLVAGAADWAELLVRWKWSQMVSRFKRGGTGR*
Ga0079218_118266812	3300007004	Agricultural Soil	VVVRSRLAARFYTGPTGHLVAGAADWAELLVRWKWSQMVSRFKRGGTGR*
Ga0079218_121055912	3300007004	Agricultural Soil	MALPLYKPVPVRSRLAARFYTGPVGHLAAGIADWAGLLARWQWSRARERYRR
Ga0079218_136620862	3300007004	Agricultural Soil	VRSRLAARFYTGPVGHLVAGVADWAELLARWKWAQARERYRRARVRR*
Ga0114129_122815362	3300009147	Populus Rhizosphere	VRSRLAARYYTGPLGHLVAGVADWAELLARWKWSQLASDFKHRRTGR*
Ga0105243_108660791	3300009148	Miscanthus Rhizosphere	LYKPRGMRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQLVSRFKRARTRR*
Ga0105242_120083661	3300009176	Miscanthus Rhizosphere	VRSRLAARYYTGPVGHLVAGIADWGELLVRWKWSRLVSRFKRAPTG
Ga0105248_112568312	3300009177	Switchgrass Rhizosphere	VRSRLAARFYTGPLGHLVAGVADWAELLVRWKCSRLVSRFKR
Ga0105249_119709412	3300009553	Switchgrass Rhizosphere	FYTGPAGHFVAGVADWAELLARWKWSQMVSRFKRARTRR*
Ga0126307_103111992	3300009789	Serpentine Soil	LAIAQPLYKPAYVRSRLAARYYTGPLGHLVAGVADWAELLARWKWSQVRARFERDA*
Ga0126307_104085972	3300009789	Serpentine Soil	VTVRSRLAARFYTGRAGHLVAGVADCAELLARWKWSQTVDRFKRARSPR*
Ga0126307_109462591	3300009789	Serpentine Soil	VRSRLAARFYTGPLGHLVAGIADWGELLVRWKWSRARERFRHTPSGR*
Ga0126307_111765822	3300009789	Serpentine Soil	VRSRLAARFYTGRAGHLVAGVADWAELLARWKWAQMVDRFKPARSRR*
Ga0126313_100253476	3300009840	Serpentine Soil	YKGVLVRSRLAARFYTGPVGHLVAGVADWAELLARWKWSQLMDRFKRARSRR*
Ga0126313_101917422	3300009840	Serpentine Soil	VRSRLAARYYTGPLGHLVAGVADWAELLARWKWSQVRARFERDA*
Ga0126313_106197011	3300009840	Serpentine Soil	VRSRLAARFYTGPAGHLVAGVADWAALLARWKWSQMKERLEQARARR*
Ga0126313_116007582	3300009840	Serpentine Soil	MAPSLYKPFPVRSRLAARFYTGPVGHLVAGIADWAELLARWKWSQTVDRFKRARSRR*
Ga0126305_104850512	3300010036	Serpentine Soil	VRSRLVARFYTGPAGHLVAGLADWGELLARWKWSRMRERLERARRRR*
Ga0126309_102803242	3300010039	Serpentine Soil	MGHPLYKPVVVRSRLAARFYTGPAGHLVAGVADWAELLARWKWSRMKERLEQARARR*
Ga0126309_104193381	3300010039	Serpentine Soil	VRSRLAARYYTGPLGHLVAGVADCAELLARWKWSRLVSRFKRARTGR*
Ga0126309_104788902	3300010039	Serpentine Soil	VRSRLAARFYTGPAGHLVAGVADWAELLARWKWSQMKERLEQARARR*
Ga0126308_100358762	3300010040	Serpentine Soil	VRSRLAARFYTGRAGHLVAGVADWAELLARWKWAQMVDRFKRARSRR*
Ga0126308_104545792	3300010040	Serpentine Soil	MRSRLAARYYTGPIGHLVAGAVDWGELLVRWKWSQMRARSKRARSRR*
Ga0126308_112412142	3300010040	Serpentine Soil	MRSRLLARYYTGPLGHLVAGIADWAELLARWKWSQMTGRFKRARSRR*
Ga0126314_108910262	3300010042	Serpentine Soil	VRSRLAARFYTGPVGHLVAGLADWAELLARWKWSHAVGRFKRARTRR*
Ga0126310_109564641	3300010044	Serpentine Soil	MGSRLIARFYTGPVGHLIAGVADWAELLVRWKWSQLMARFRHARSGR*
Ga0126311_110046771	3300010045	Serpentine Soil	PRVRSRLAARFYTGPMGHLVAGIADWAALLIRWKWAATADRHKLRRTRR*
Ga0126306_111305922	3300010166	Serpentine Soil	VRSRLLARFYTGPLGHLVAGVADWAALLARWNAEKLRERLKRR*
Ga0134127_109570081	3300010399	Terrestrial Soil	MRSRLLARFYTGPAGHLVAGVADWAQLLVRWKWSQMVSRFKR
Ga0134127_123914211	3300010399	Terrestrial Soil	RLAARFYTGPVGHLVAGIADWGELLVRWKWSRLVSRFKRARTGR*
Ga0136620_105194691	3300012186	Polar Desert Sand	VRSRLAARFYTGPLGHLVAGVADWAEMIARWQWPRLRARLSRRSRASR
Ga0157285_101231662	3300012897	Soil	MRSRLAARFYTGPVGHLVAGIADWGELLARWKWSQLVSRFKRARSRR*
Ga0157286_100904851	3300012908	Soil	VRSRLAARFYTGPLGHLVAGVADWAELLVRWKCSRLVSRFK
Ga0164300_101221042	3300012951	Soil	VRSRLVARYYTGPLGHLVAGIADWAELLARWKWSQLVSRFKRTPTRR*
Ga0164304_108287592	3300012986	Soil	MRSRLLARFYTGPAGHLVAGVFDWAELLARWKWSQMVSRVKRTPTRR*
Ga0157380_125192791	3300014326	Switchgrass Rhizosphere	GPTGHFVAGVADWAELLARWKWSQLVSRFKRARTRR*
Ga0182001_104927481	3300014488	Soil	VRERLAARFYTGPVGHLVAGVADWAELLARWKWAQLMSRFKRADASR*
Ga0173483_103748871	3300015077	Soil	MRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQLRERWRR*
Ga0132257_1007321802	3300015373	Arabidopsis Rhizosphere	VRSRLAARYYTGPLGHLVAGVADWAELLVRWKCSRLVSRFKRARTRR*
Ga0132255_1041840401	3300015374	Arabidopsis Rhizosphere	AGHFVAGVADWAELLARWKWSQLVSRFKRAPTRR*
Ga0183260_1000255113	3300017787	Polar Desert Sand	VRSRLAARFYTGPLGHLVAGVADWAELLARWQWSRLRARFKRTA
Ga0163161_109310792	3300017792	Switchgrass Rhizosphere	MRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQLVSRFKRARTRR
Ga0184619_102634122	3300018061	Groundwater Sediment	MRSRLLARFYTGPAGHLVAGIADWAELLVRWKWSQMVSRFKRAPTRR
Ga0190265_100819012	3300018422	Soil	VRSRLLARFYTGPLGHLIAGAADWAGLLARWKWSQLRERVTRERPRR
Ga0190265_103008812	3300018422	Soil	MRSRLLARYYTGPLGHLVAGVADWAELLARWNWHRLRERFKARRSGR
Ga0190265_130377162	3300018422	Soil	MAVSLYKPLVVRSRLAARFYTGPTGHLVAGAADWAELLVRWKWSQMVSRFKRSGTGR
Ga0190265_133492551	3300018422	Soil	VDVRSRLAARFYTGPTGHLVAGIADWAELLARWKWSRTVDRFKRARSRR
Ga0190272_107191012	3300018429	Soil	VRSRLAARYYTGPLGHLVAGVADWAELLARWKWSRLVSRFKRAPTRR
Ga0190275_101661902	3300018432	Soil	MSLPLYKPVVVRSRLAARFYTGPAGHLVAGVADWAELLARWKWSQLVDRFKAARRRGE
Ga0190275_114341571	3300018432	Soil	MAVSLYKPLVVRSRLAARFYTGPTGHLVAGAADWAELLVRWKWSQMVSRFKRGGTGR
Ga0190275_120009342	3300018432	Soil	MAVSLYKPVVVRSRLAARFYTGPIGHLVAGTADWAELLARWKWSQVVSRFKRDGTGR
Ga0190270_103720892	3300018469	Soil	MRSRLAARFYTGPAGHLVAGIADWAELLARWNWSRMVSRFERARSRR
Ga0190270_104770483	3300018469	Soil	SRLAARYYTGPLGHLVAGVADWAELLARWKWSQLVSRFKCAPMRRQAGP
Ga0190271_131828401	3300018481	Soil	VRSRLAARYYTGPLGHLVAGIADWAELLARWKWSQLVARFKRARSSR
Ga0193598_10317362	3300018910	Soil	MRSRLLARYYTGPLGHLVAGVADWAGLLSRWQYARLRERLKRARGRS
Ga0193593_11713782	3300018939	Soil	MRSRLLARYYTGPLGHLVAGVADWAGLLSRWQYARLRERLKRARG
Ga0190264_106621792	3300019377	Soil	MAFSLYKPHSVRSRLAARFYTGPVGHFVAGVADWAELLARWKWSQMVSRFKRRRASR
Ga0190264_112442141	3300019377	Soil	VTVVLTSGAAMAHSLYKPRGMRSRLLARFYTGPLGHFVAGIADWAELLARWNADRLRERLRRR
Ga0193697_11215051	3300020005	Soil	VRSRIAARYYTGPLGHLVAGIADWAELLARWKCSQLVSRF
Ga0196958_100140082	3300020181	Soil	MALPLYKPVPVRSRLAARFYTGPVGHLVAGIADWAELLARWKWSRARERYRRARARR
Ga0196958_102204191	3300020181	Soil	VRRRLLARYYTGPVGHLVAGVADWAGLLARWKASQAIGRLKRARRGR
Ga0196959_101421372	3300021184	Soil	VRSRLLARYYTGPVGHLVAGIADWAEMLARWHWERLRERYTLRRSGR
Ga0193694_10201741	3300021415	Soil	MRSRLLARYYTGRAGHLVAGIADWAELLARWRWSRAVSRFKRSPMSR
Ga0222622_108352662	3300022756	Groundwater Sediment	VRSRLAARFYTGPAGHLVAGIADWAELLARWKWSQLMSRFKRTRSSR
Ga0196962_100354192	3300024430	Soil	VRSRLLARFYTGPLGHLVAGVLDWGELLARWKAQQLRERLRRRAAARR
Ga0207642_101291512	3300025899	Miscanthus Rhizosphere	VRSRLAARYYTGPLGHLVAGIADWAELLARWKWSQLVSRFKRTPTRR
Ga0207688_100955102	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQMVSRFKRARTRR
Ga0207688_105788092	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VRSRLAARFYTGPLGHLVAGVADWAELLVRWKCSRLVSRFKRARTRR
Ga0207650_115942392	3300025925	Switchgrass Rhizosphere	VRSRLAARFYTGPVGHLVAGIADWGELLARWKWSQLVSRFKRARSRR
Ga0207709_102941151	3300025935	Miscanthus Rhizosphere	QSLYKPRGMRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQMVSRFKRARTRR
Ga0207704_110361602	3300025938	Miscanthus Rhizosphere	VRSRLAARYYTGPVGHLVAGIADWGELLVRWKWSRLVSRFKRAPTGR
Ga0207703_114760691	3300026035	Switchgrass Rhizosphere	RSRLAARYYTGPVGHLVAGIADWGELLVRWKWSRLVSRFKRARTRR
Ga0207683_101013064	3300026121	Miscanthus Rhizosphere	VRSRLAARYYTGPLGHLVAGIADWAELLTRWKWSQLVSRFKRTRTRR
Ga0207683_119753041	3300026121	Miscanthus Rhizosphere	MRSRLAARFYTGPAGHFVAGVADWAELLARWKWSQLVSRFKRAHTRR
Ga0209382_118475992	3300027909	Populus Rhizosphere	VRSRLAARFYTGPVGHLVAGVADWAELLARWKWAQMRERYRRARAGR
Ga0247818_103225432	3300028589	Soil	FYTGPAGHFVAGVADWAELLARWKWSQLVSRFKRARTRR
Ga0247822_108209332	3300028592	Soil	VRSRLAARYYTGPLGHLVAGIADWAELLARWKWSQLVSRFKQASTRR
Ga0247821_105683981	3300028596	Soil	MRSRLAARFYTGPTGHFVAGVADWAELLARWKWSQLVSRFKRA
Ga0247820_102482912	3300028597	Soil	MRSRLAARFYTGPTGHFVAGVADWAELLARWKWSQLVSRFKRARTRR
Ga0247819_110307782	3300028608	Soil	YKPRGMRSRLAARFYTGPTGHFVAGVADWGELLARWKWSQLVSRFKRARTRR
Ga0307277_100309812	3300028881	Soil	MRSRLLARFYTGPVGHLVAGVADWAELLVRWKWARMASRFKRTRSRR
Ga0247826_112430542	3300030336	Soil	MRSKLLARFYTGPVGHLVAGVADWAELLARWKWSQTVSRFKRGRSRR
Ga0307408_1022097362	3300031548	Rhizosphere	VRSRLAARFYTGPAGHLVAGIADWAELLTRWKWSQLVSRFKHARSRR
Ga0307405_119495532	3300031731	Rhizosphere	VRSRLAARFYTGPLGHLVAGVADWAELLARWKWAQVRERYRRA
Ga0307405_121481751	3300031731	Rhizosphere	MAISLYKPSLVRSWLAARFYTGPLGHLVAGIADWAELLIRWK
Ga0307410_104375292	3300031852	Rhizosphere	VRSRLAARFYTGPVGHLVAGIADWAGLLARWKWSQLVGRFKRAHARR
Ga0307406_103843392	3300031901	Rhizosphere	VRSRLAARFYTGPLGHLVAGIADWGTLLARWKWSRLLSRFKRARTRR
Ga0307407_106210051	3300031903	Rhizosphere	VRSRLAARYYTGPLGHLVAGIADWGELLVRWKGSQLVSRFKRARTRR
Ga0307412_109415791	3300031911	Rhizosphere	VRSRLAARFYTGPLGHLVAGVADWAELLTRWKWSQLVSRFKRAGTRR
Ga0308175_1001184972	3300031938	Soil	VRSRLAARYYTGPLGHLVAGIADWGELLVRWKGSQLVSLFKRARTRR
Ga0308174_116432832	3300031939	Soil	MRSRLAARFYTGAAGHLVAGIADWAELLARWKWSQMVSRFKREPPGREPGP
Ga0308176_120695722	3300031996	Soil	ARYYTGPVGHLVAGIADWGELLVRWKWSQLVSRFKRARSRR
Ga0307414_103059841	3300032004	Rhizosphere	ARFYTGPVGHLVAGIADWAGLLARWKWSQLVGRFKRAHARR
Ga0326721_102939682	3300032080	Soil	VRSRLAARFYTGPLGHLVAGIADWGELLVRWKWSRVRERFRRASSGR
Ga0326721_102981841	3300032080	Soil	MTHPLYKHGFVRSRLAARFYTGPAGHLVAGVADWAELLARWKWSQLKDRFKRTPR
Ga0326721_110212811	3300032080	Soil	MAVSLYKPLVVRSRLAARFYTGPTGHLVAGAADWAELLVRWKWSQMVSRFK
Ga0247830_115031991	3300033551	Soil	VRSRLAARYYTGPLGHLVAGIADWAELLARWKWSQLVSRFKRTPARR
Ga0334918_037436_536_670	3300034000	Hypolithic Biocrust	MPSRLLARFYTGPIGHLVAGIADWAEVLARWGYERLRERARARR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077758

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences