Metagenome / Metatranscriptome Family F077757

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077757
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	131 residues
Representative Sequence	MDPNFYNSTISLIIGILVLSIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Number of Associated Samples	96
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	35.04 %
% of genes from short scaffolds (< 2000 bps)	75.21 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (65.812 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.658 % of family members)
Environment Ontology (ENVO)	Unclassified (23.077 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.607 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.85% β-sheet: 32.09% Coil/Unstructured: 38.06%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF07934	OGG_N	21.37
PF00730	HhH-GPD	8.55
PF12850	Metallophos_2	5.98
PF10996	Beta-Casp	2.56
PF07521	RMMBL	2.56
PF02416	TatA_B_E	1.71
PF03685	UPF0147	1.71
PF16661	Lactamase_B_6	0.85
PF06973	DUF1297	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	29.91
COG0177	Endonuclease III	Replication, recombination and repair [L]	8.55
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	8.55
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	8.55
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	8.55
COG1698	Uncharacterized conserved protein, UPF0147 family	Function unknown [S]	1.71
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	65.81 %
Unclassified	root	N/A	33.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	35.90 %
Unclassified	root	N/A	33.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	35.90 %
Unclassified	root	N/A	33.33 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	28.21 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	2.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	28.21 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	2.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	28.21 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	2.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	12.82 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	5.13 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	3.42 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	2.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	12.82 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3.42 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	2.56 %
Candidatus Nitrosocosmicus oleophilus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus oleophilus	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8935735	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1801	Open in IMG/M
2228664021\|ICCgaii200_c1095475	All Organisms → cellular organisms → Archaea	1506	Open in IMG/M
2228664021\|ICCgaii200_c1096792	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2261	Open in IMG/M
3300000559\|F14TC_100558792	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1314	Open in IMG/M
3300000787\|JGI11643J11755_11633098	Not Available	685	Open in IMG/M
3300000890\|JGI11643J12802_10174042	All Organisms → cellular organisms → Archaea	884	Open in IMG/M
3300003324\|soilH2_10064725	All Organisms → cellular organisms → Archaea	5761	Open in IMG/M
3300003987\|Ga0055471_10003940	All Organisms → cellular organisms → Archaea	2744	Open in IMG/M
3300003996\|Ga0055467_10035840	All Organisms → cellular organisms → Archaea	1217	Open in IMG/M
3300003996\|Ga0055467_10296871	Not Available	517	Open in IMG/M
3300003999\|Ga0055469_10008927	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1976	Open in IMG/M
3300004480\|Ga0062592_101196180	All Organisms → cellular organisms → Archaea	710	Open in IMG/M
3300004643\|Ga0062591_101916171	All Organisms → cellular organisms → Archaea	608	Open in IMG/M
3300005539\|Ga0068853_101362319	All Organisms → cellular organisms → Archaea	686	Open in IMG/M
3300006169\|Ga0082029_1239168	Not Available	564	Open in IMG/M
3300006844\|Ga0075428_100076165	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3663	Open in IMG/M
3300006845\|Ga0075421_100325082	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1864	Open in IMG/M
3300006847\|Ga0075431_100053241	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	4173	Open in IMG/M
3300006847\|Ga0075431_100696080	Not Available	994	Open in IMG/M
3300006876\|Ga0079217_10015394	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2581	Open in IMG/M
3300006876\|Ga0079217_10061846	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	1549	Open in IMG/M
3300006880\|Ga0075429_100403970	All Organisms → cellular organisms → Archaea	1196	Open in IMG/M
3300006894\|Ga0079215_10023620	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2104	Open in IMG/M
3300006894\|Ga0079215_10107235	Not Available	1245	Open in IMG/M
3300006918\|Ga0079216_10339497	All Organisms → cellular organisms → Archaea	911	Open in IMG/M
3300006969\|Ga0075419_10028850	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3440	Open in IMG/M
3300007004\|Ga0079218_10025893	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	3304	Open in IMG/M
3300007004\|Ga0079218_10304742	All Organisms → cellular organisms → Archaea	1296	Open in IMG/M
3300009100\|Ga0075418_10025183	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	6512	Open in IMG/M
3300009146\|Ga0105091_10084481	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1441	Open in IMG/M
3300009146\|Ga0105091_10278592	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	812	Open in IMG/M
3300009147\|Ga0114129_10994319	All Organisms → cellular organisms → Archaea	1057	Open in IMG/M
3300009157\|Ga0105092_10037759	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2573	Open in IMG/M
3300009168\|Ga0105104_10011930	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus oleophilus	5418	Open in IMG/M
3300009168\|Ga0105104_10225677	Not Available	1020	Open in IMG/M
3300009304\|Ga0116588_1130803	Not Available	616	Open in IMG/M
3300009789\|Ga0126307_10003945	All Organisms → cellular organisms → Archaea	10239	Open in IMG/M
3300009789\|Ga0126307_10078205	All Organisms → cellular organisms → Archaea	2610	Open in IMG/M
3300010037\|Ga0126304_11257882	Not Available	508	Open in IMG/M
3300010039\|Ga0126309_10091914	All Organisms → cellular organisms → Archaea	1546	Open in IMG/M
3300010040\|Ga0126308_11231037	Not Available	530	Open in IMG/M
3300010166\|Ga0126306_10004267	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	8439	Open in IMG/M
3300010375\|Ga0105239_10218792	All Organisms → cellular organisms → Archaea	2136	Open in IMG/M
3300010403\|Ga0134123_10267502	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1497	Open in IMG/M
3300011332\|Ga0126317_10899285	Not Available	517	Open in IMG/M
3300011332\|Ga0126317_11033151	All Organisms → cellular organisms → Archaea	952	Open in IMG/M
3300011333\|Ga0127502_10307322	Not Available	970	Open in IMG/M
3300012884\|Ga0157300_1001803	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2074	Open in IMG/M
3300012911\|Ga0157301_10004198	All Organisms → cellular organisms → Archaea	2564	Open in IMG/M
3300012943\|Ga0164241_10422899	Not Available	956	Open in IMG/M
3300013096\|Ga0157307_1021559	All Organisms → cellular organisms → Archaea	1067	Open in IMG/M
3300013096\|Ga0157307_1058473	All Organisms → cellular organisms → Archaea	738	Open in IMG/M
3300013307\|Ga0157372_12136763	All Organisms → cellular organisms → Archaea	643	Open in IMG/M
3300013871\|Ga0181466_1001206	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	8573	Open in IMG/M
3300014311\|Ga0075322_1015673	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1513	Open in IMG/M
3300014311\|Ga0075322_1210183	Not Available	502	Open in IMG/M
3300014314\|Ga0075316_1195060	Not Available	532	Open in IMG/M
3300015077\|Ga0173483_10006887	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3822	Open in IMG/M
3300015077\|Ga0173483_10089826	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1258	Open in IMG/M
3300015371\|Ga0132258_10072042	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	8017	Open in IMG/M
3300015373\|Ga0132257_102994968	Not Available	615	Open in IMG/M
3300018067\|Ga0184611_1122132	Not Available	914	Open in IMG/M
3300018073\|Ga0184624_10076803	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1399	Open in IMG/M
3300018422\|Ga0190265_11589976	All Organisms → cellular organisms → Archaea	766	Open in IMG/M
3300018432\|Ga0190275_10014584	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	5931	Open in IMG/M
3300018465\|Ga0190269_10001704	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	10388	Open in IMG/M
3300018465\|Ga0190269_11624316	Not Available	541	Open in IMG/M
3300018466\|Ga0190268_10104831	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1325	Open in IMG/M
3300018469\|Ga0190270_10652320	All Organisms → cellular organisms → Archaea	1035	Open in IMG/M
3300018476\|Ga0190274_10153239	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	1949	Open in IMG/M
3300018476\|Ga0190274_10172794	All Organisms → cellular organisms → Archaea	1860	Open in IMG/M
3300018481\|Ga0190271_10937658	All Organisms → cellular organisms → Archaea	990	Open in IMG/M
3300018481\|Ga0190271_11239405	All Organisms → cellular organisms → Archaea	867	Open in IMG/M
3300019356\|Ga0173481_10000532	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	8271	Open in IMG/M
3300019767\|Ga0190267_10065036	All Organisms → cellular organisms → Archaea	1315	Open in IMG/M
3300019884\|Ga0193741_1001264	All Organisms → cellular organisms → Archaea	7433	Open in IMG/M
3300019884\|Ga0193741_1157629	Not Available	556	Open in IMG/M
3300020020\|Ga0193738_1167692	Not Available	571	Open in IMG/M
3300022883\|Ga0247786_1065338	All Organisms → cellular organisms → Archaea	753	Open in IMG/M
3300024430\|Ga0196962_10098931	All Organisms → cellular organisms → Archaea	904	Open in IMG/M
3300024430\|Ga0196962_10172504	Not Available	690	Open in IMG/M
3300025559\|Ga0210087_1015734	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1563	Open in IMG/M
3300025559\|Ga0210087_1026421	All Organisms → cellular organisms → Archaea	1178	Open in IMG/M
3300025567\|Ga0210076_1002503	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	4475	Open in IMG/M
3300025795\|Ga0210114_1025223	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1264	Open in IMG/M
3300025904\|Ga0207647_10537150	Not Available	649	Open in IMG/M
3300025972\|Ga0207668_10818892	All Organisms → cellular organisms → Archaea	825	Open in IMG/M
3300026118\|Ga0207675_101581989	Not Available	676	Open in IMG/M
3300026535\|Ga0256867_10048663	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1719	Open in IMG/M
3300027075\|Ga0214467_1008403	Not Available	1041	Open in IMG/M
3300027360\|Ga0209969_1059836	Not Available	601	Open in IMG/M
3300027617\|Ga0210002_1046183	Not Available	745	Open in IMG/M
3300027637\|Ga0209818_1230402	Not Available	552	Open in IMG/M
3300027682\|Ga0209971_1154092	Not Available	567	Open in IMG/M
3300027691\|Ga0209485_1021872	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1473	Open in IMG/M
3300027691\|Ga0209485_1045949	All Organisms → cellular organisms → Archaea	1107	Open in IMG/M
3300027695\|Ga0209966_1174354	Not Available	504	Open in IMG/M
3300027743\|Ga0209593_10018097	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2868	Open in IMG/M
3300027873\|Ga0209814_10367837	Not Available	630	Open in IMG/M
3300027880\|Ga0209481_10111409	All Organisms → cellular organisms → Archaea	1329	Open in IMG/M
3300027909\|Ga0209382_11520319	Not Available	666	Open in IMG/M
3300028578\|Ga0272482_10287433	Not Available	528	Open in IMG/M
3300031547\|Ga0310887_10845508	Not Available	577	Open in IMG/M
3300031548\|Ga0307408_101478946	Not Available	642	Open in IMG/M
3300031562\|Ga0310886_10102324	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1430	Open in IMG/M
3300031731\|Ga0307405_10255116	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1307	Open in IMG/M
3300031824\|Ga0307413_11032137	Not Available	707	Open in IMG/M
3300031847\|Ga0310907_10866175	Not Available	509	Open in IMG/M
3300031858\|Ga0310892_10449706	Not Available	849	Open in IMG/M
3300031903\|Ga0307407_11591344	Not Available	518	Open in IMG/M
3300031908\|Ga0310900_10102571	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1840	Open in IMG/M
3300032004\|Ga0307414_11345988	Not Available	663	Open in IMG/M
3300032012\|Ga0310902_10226851	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1112	Open in IMG/M
3300032075\|Ga0310890_10010311	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	4412	Open in IMG/M
3300032075\|Ga0310890_10076159	All Organisms → cellular organisms → Archaea	2022	Open in IMG/M
3300032122\|Ga0310895_10074347	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1319	Open in IMG/M
3300034148\|Ga0364927_0110224	Not Available	771	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.21%
Host-Associated	Host-Associated	23.93%
Engineered	Engineered	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.12%
Plants	Host-Associated → Plants	23.93%
Aquatic	Environmental → Aquatic	17.09%
Built Environment	Engineered → Built Environment	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.24%
Freshwater	Environmental → Aquatic → Freshwater	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.69%
Marine	Environmental → Aquatic → Marine	6.84%
Sediment	Environmental → Aquatic → Sediment	2.56%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%
Unclassified	Engineered → Built Environment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.13%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.56%
Sand	Environmental → Terrestrial → Soil → Sand	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Loam	Environmental → Terrestrial → Soil → Loam	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.27%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.56%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.71%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.13%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.27%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.42%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Clean Room	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009304	Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_2 SPAdes	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013871	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In4-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01462250	2088090015	Soil	IDVYFIISMDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
ICCgaii200_10954752	2228664021	Soil	MIFMDXNSCNRTILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQXTLNLTDAR
ICCgaii200_10967923	2228664021	Soil	MDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
F14TC_1005587922	3300000559	Soil	MDPNFFNSKISLLIGIVVLSIISLTDTYSQNSEMSVIVKIINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDVDVFGIIDSVKKENNQITLNLTNAR*
JGI11643J11755_116330981	3300000787	Soil	IDVYFMISMDPNSCNRTILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQVTLNLTDAR*
JGI11643J12802_101740422	3300000890	Soil	MDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR*
soilH2_100647259	3300003324	Sugarcane Root And Bulk Soil	MGNVYYFSILLSLPIVWILSTFSFVDILSQNSEISVIIKLINDDKFIGETWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNSTQDLNRYIVFVDASSTIDDIDVFGTIDSLNNDNNEITLNLTEAS*
Ga0055471_100039402	3300003987	Natural And Restored Wetlands	MIFMDHNSYNPTILLITGLLVLSIFSLIDSYSQDSEMSVIVKLINADKFLNQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR*
Ga0055467_100358401	3300003996	Natural And Restored Wetlands	MISMDPNSCNRTILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQVTLNLTDAR*
Ga0055467_102968712	3300003996	Natural And Restored Wetlands	YSQDSEISVIVKLINADKFLAQTWDVNTQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLNNAR*
Ga0055469_100089271	3300003999	Natural And Restored Wetlands	MDPNFHNSTISLIIGILVLSIFSLTDTYPQISEMSVIVKLINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLANAR*
Ga0062592_1011961802	3300004480	Soil	SMDPNFYTSKISLIIGILVLSIFYLTDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTKAR*
Ga0062591_1019161712	3300004643	Soil	YSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR*
Ga0068853_1013623192	3300005539	Corn Rhizosphere	ISMDPNFYTSKISLIIGILVLSIFYLTDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR*
Ga0082029_12391682	3300006169	Termite Nest	SIKPLISCMLILSFFSIINIYPQNSELSIIVKLTNGDKFIGQTWDINTQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNSTQDLNRYSIFVDASSTMDDIDVFGTIDSLTNDNNQIMLNLTNAR*
Ga0075428_1000761655	3300006844	Populus Rhizosphere	MDPNFFNSKISLIIGIVVLSIISLTDTYSQNSEMSVIVKIINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDVDVFGIIDSVKKENNQITLNLTNAR*
Ga0075421_1003250822	3300006845	Populus Rhizosphere	MIFMDHNSCNRTILLITGILVLSIFSLSDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTLDSLRKENNQITLNLTDAR*
Ga0075431_1000532411	3300006847	Populus Rhizosphere	IVVLSIISLTDTYSQNSEMSVIVKIINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDVDVFGIIDSVKKENNQITLNLTNAR*
Ga0075431_1006960802	3300006847	Populus Rhizosphere	MIFMDHNSCNRTILLITGILVLSIFSLSDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQLTLNLTDAR*
Ga0079217_100153943	3300006876	Agricultural Soil	MDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR*
Ga0079217_100618463	3300006876	Agricultural Soil	MNKDYHFSIISSISVILVLSFFSLIATYSQNSEISVIVNLINGDKFIGQTWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNATQDLNRYSIFVDSSSTIDDVDVFGTIDSLTNDNNQITLNLTNAR*
Ga0075429_1004039702	3300006880	Populus Rhizosphere	MDPNFFNSKISLIIGIVVLSIISLTDTYSQNSEMSVIVKIINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDVDVFGIIDSVKKENNQITLNLT
Ga0079215_100236204	3300006894	Agricultural Soil	YFIISMDPNFHTSTLSLIIGILVLSIFSLNDTYPQISEMSVIVKLINGDKYLDQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR*
Ga0079215_101072352	3300006894	Agricultural Soil	MNKDYHFSIISSISVILVLSFFSLIATYSQNSEISVIVNLINGDKFIGQTWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNSTQGLNRYYIFVDASSTIDDVDVFGTIDSLTNDNNQITLNLTNAR*
Ga0079216_103394972	3300006918	Agricultural Soil	MDPNFYNSTISLIIGILVLSIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR*
Ga0075419_100288503	3300006969	Populus Rhizosphere	MDPNFFNSKISLIIGIVVLSIISLTDTYSQNSEMSVIVKIINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDVDVSGIIDSVKKENNQITLNLTNAR*
Ga0079218_100258934	3300007004	Agricultural Soil	MNKNYHFSIISSILVILVLSFFSLIATYSQNSEISVIVNLINGDKFIGQTWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNATQDLNRYSIFVDSSSTIDDVDVFGTIDSLTNNDNRITLNLTNAR*
Ga0079218_103047422	3300007004	Agricultural Soil	MDHNFHNSTISLMVGIVALSIFSFTDTYSQNSEMSVIVKLINGDKFLAQTWDINAQLRDKSTASEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIED
Ga0075418_100251837	3300009100	Populus Rhizosphere	MDHNSCYRTILLITGILVLSIFSLSDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLNLTDAR*
Ga0105091_100844811	3300009146	Freshwater Sediment	MDHNSCNPTILLITGILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSDSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR*
Ga0105091_102785922	3300009146	Freshwater Sediment	MDPNFHTSTLSLIIGILVLSIFSLIDTYPQISEMSVIVKLINGDKYLDQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSSIEDIDVFGTIDSVKKENNQITLNLANAR*
Ga0114129_109943192	3300009147	Populus Rhizosphere	MDHNSCNRTILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTLDSLRKENNQITLNLTDAR*
Ga0105092_100377591	3300009157	Freshwater Sediment	MVGIVVLSIFSFTDTYSQNSEMSVIVKLINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSSIEDIDVFGTIDSVKKENNQITLNLANAR*
Ga0105104_100119301	3300009168	Freshwater Sediment	MDHKSCNPTILLITTILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDAASTIDDIDVFGTIDSLRKENNQITLNLTDAR*
Ga0105104_102256772	3300009168	Freshwater Sediment	MDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGEKFLAETWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR*
Ga0116588_11308031	3300009304	Sediment	MDHNSCNPTILLITGILVSSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR*
Ga0126307_100039453	3300009789	Serpentine Soil	MNNNYHFSILSSISGILVLSFFSLIDIYPQNSEISVIVKLINGDKFIGQTWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNSTQDLNRYSLFVDASSTIDDVDVFGTIDLLTNDNNQITLNLTNTR*
Ga0126307_100782052	3300009789	Serpentine Soil	MDPNFYNSTISLIIGIFVLSIFSLTDTYSQNSEMSVIVKIIKGDKFLDQIWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGKIDSVKKENNQITLNLSNAR*
Ga0126304_112578821	3300010037	Serpentine Soil	MDPNFYNSTISLIIGIFVLSFFSLTDTYSQNSEMSVIVKIIKGDKFLDQIWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGK
Ga0126309_100919142	3300010039	Serpentine Soil	MDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFQVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGKIDSVKKENNQITLNLSNAR*
Ga0126308_112310371	3300010040	Serpentine Soil	ISMDPNFYNSTISLIIGIFVLSIFSLTDTYSQNSEMSVIVKIIKGDKFLDQIWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFAKIDSVKKENNQITLNLSNAR*
Ga0126306_1000426710	3300010166	Serpentine Soil	MDPNFYNSTILLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR*
Ga0105239_102187922	3300010375	Corn Rhizosphere	MDPNFYTSKISLIIGILVLSIFYLTDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR*
Ga0134123_102675022	3300010403	Terrestrial Soil	IFMDHNSCNPTILLITTILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVNENQTVQLIIPLSNSTKDLNRYSIFVDAASTVDDIDVFGTIDSLRKENNQITLNLTDAR*
Ga0126317_108992851	3300011332	Soil	TILLITGILVLSIFSLIDSYSQDSEISVIVKLINADKFLAQTWDVNAELRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNFNNAR*
Ga0126317_110331512	3300011332	Soil	TISLIMGIFVLSIFSLTDTYSQNSEMSVIVKIIKGDKFLDQIWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGKIDSVKKENNQITLNLSNAR*
Ga0127502_103073222	3300011333	Soil	IFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR*
Ga0157300_10018032	3300012884	Soil	MDPNFYTSKISLIIGILVLSIFYLSDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNTR*
Ga0157301_100041984	3300012911	Soil	MDPNFYTSKISLIIGILVLSIFYLTDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNTR*
Ga0164241_104228992	3300012943	Soil	MDHNSCNPTILLITGILVLSIFSLIDSYCQDSEISVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLNNVR*
Ga0157307_10215592	3300013096	Soil	MDPNFYTSKISLIIGILVLSIFYLSDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTKAR*
Ga0157307_10584731	3300013096	Soil	ILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTNAR*
Ga0157372_121367632	3300013307	Corn Rhizosphere	DTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR*
Ga0181466_100120610	3300013871	Clean Room	MNTNYYFFIIPLISGVSILSFFSLINIYPQNSEISVIVQLTNGDKFIGQTWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNSTQDLNRYSIFVDASSTIDDIDVFGTIDSLTNDNNQITLNLTKAR*
Ga0075322_10156731	3300014311	Natural And Restored Wetlands	MDHNSYNPTILLITGLLVLSIFSLIDSYSQDSEMSVIVKLINADKFLNQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR*
Ga0075322_12101831	3300014311	Natural And Restored Wetlands	SLIDSYCQDSEISVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLSNAR*
Ga0075316_11950601	3300014314	Natural And Restored Wetlands	MDHNSYNPTILLITGLLVLSIFSLIDSYSQDSEMSVIVKLINADKFLNQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLSNAR*
Ga0173483_100068874	3300015077	Soil	MDPNFYTSKISLIIGILVLSIFYLSDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR*
Ga0173483_100898262	3300015077	Soil	MDHNSCNPTILLITGILVLSIFSLIDSYCQDSEISVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTNAR*
Ga0132258_100720429	3300015371	Arabidopsis Rhizosphere	MDPNFYTSKISLIIGILVLSIFYLTDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSSDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR*
Ga0132257_1029949681	3300015373	Arabidopsis Rhizosphere	MDHNSCNPTILLITGILVLSIFSLIDSYCQDSEISVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNMYSIFVDAASTIDDIDVFGTIDSLRKENNQITLNLTDAR*
Ga0184611_11221322	3300018067	Groundwater Sediment	MIFMDHNSCNPTIFLITGILILSIFSLIDSYSQDSEMSVIVKLINADKFLTQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTNAR
Ga0184624_100768032	3300018073	Groundwater Sediment	LSIFSLIDSYSQDSEISVIVKLINADKYLTQTWDVNAQLRDKSTDSEISQDQTTFTVNENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTNAR
Ga0190265_115899762	3300018422	Soil	MDHNPHNYTISLIIGILILSIFSLTTTYSQNSEMSVIVKLINADKFLAQTWDINGQLRDKSTDSEISKDQTTFKVSENQTIQLIIPLSNSTEDLNRYSIFVDASSTIDDIDVFGTIDSLKKEDNQITLNLANAS
Ga0190275_100145843	3300018432	Soil	MIFMDHNSCNPTLFLITGILILSIFSLIDSYSQVSEMSVIVKLINADKFLTQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0190269_100017047	3300018465	Soil	MDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGEKFLAETWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Ga0190269_116243161	3300018465	Soil	MNKDYHFSIISSISIMLVLSFFSLIATYSQNSEISVIVNLINGDKFIGQTWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNATQDLNRYSIFVDSSSTIDDVDVFGTIDSLTNDNNQITLNLTNAR
Ga0190268_101048311	3300018466	Soil	STISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Ga0190270_106523201	3300018469	Soil	MDPNFYNSTISLIIGILVLSIFSLTDTYPQISEMSVIVKLINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Ga0190274_101532391	3300018476	Soil	MDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Ga0190274_101727944	3300018476	Soil	MIFMDHNSCNPTLFLITGILILSTFSLIDSYSQVSEMSVIVKLINADKFLTQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0190271_109376581	3300018481	Soil	MDHNSCNPTILLITGILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0190271_112394052	3300018481	Soil	YFMIFMDHNSCNPTIFLITGILVLSIFSLIDSYSQDSEMSVIVKLINADKFLTQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0173481_100005322	3300019356	Soil	MFYFIISMDPNFYTSKISLIIGILVLSIFYLTDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNTR
Ga0190267_100650361	3300019767	Soil	MDPNFYNSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTDAR
Ga0193741_10012644	3300019884	Soil	MDPNFYNSTISLIIGILVLPIFSLTDINSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Ga0193741_11576291	3300019884	Soil	MDHNPHNSTISLIIGILILSIFSLTNTYSQNSEMSVIVKLINADKYLAQTWDINGQLRDKSTDSEISKDQTTFKVSENQTIQLIIPLSNSTEDLNRYSIFVDASSTID
Ga0193738_11676921	3300020020	Soil	MDHNPHNSTISLIIGILILSIFSLTNTYSQNSEMSVIVKLINADKYIAQTWDINGQLRDKPTDSEISKDQTTFKVSENQTIQLIIPLSNSTEDLNRYSIFVDASSTIDDIDVFGTIDSLKKEDNQITLNLANA
Ga0247786_10653381	3300022883	Soil	DTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR
Ga0196962_100989311	3300024430	Soil	MNNDYYFSIISSTLGIFILSFFSLFDIYPQNSEISVIVKLINGDKFIGQTWDINAQLKDKSSNSEITKDQTTFKVTQNQTIQMILPLSNSTQDLNRYSIFVDASSTIDDIDVFGTIDSLTNENNQIILNLTNAR
Ga0196962_101725041	3300024430	Soil	MNKDYHFSMISSISVILVLSFFSLIATYSQNSEISVIVNLINGDKFIGQTWDINAQLKDKSSNSEISRDQTTFKVNQNQTIQMILPLSNATQDLNRYSIFVDSSSTIDDVDVFGTIDSLTNDNNQITLNLTNAR
Ga0210087_10157341	3300025559	Natural And Restored Wetlands	MDHNSYNPTILLITGLLVLSIFSLIDSYSQDSEMSVIVKLINADKFLNQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0210087_10264211	3300025559	Natural And Restored Wetlands	MDPNSCNRTILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQVTLNLTDAR
Ga0210076_10025033	3300025567	Natural And Restored Wetlands	MIFMDHNSYNPTILLITGLLVLSIFSLIDSYSQDSEMSVIVKLINADKFLNQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0210114_10252231	3300025795	Natural And Restored Wetlands	SLIIGILVLSIFSLTDTYPQISEMSVIVKLINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLANAR
Ga0207647_105371501	3300025904	Corn Rhizosphere	MDPNFYTSKISLIIGILVLSIFYLTDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQIT
Ga0207668_108188921	3300025972	Switchgrass Rhizosphere	LSIFYLSDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSSDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR
Ga0207675_1015819891	3300026118	Switchgrass Rhizosphere	MDPNFYTSKISLIIGILVLSIFYLSDTYSQNSEMSVIVKLINGDKFLDQIWDINAQLRDKSSDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDSVKKENNQITLNLTNAR
Ga0256867_100486632	3300026535	Soil	MDPNFHNSTISLIIGILVLSIFSLTDTYPQISEMSVIVKLINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNVNQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLANAR
Ga0214467_10084031	3300027075	Soil	FSLTNTYSQNSEMSVIVKLINADKYIAQTWDINGQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Ga0209969_10598361	3300027360	Arabidopsis Thaliana Rhizosphere	MIFMDHNSCNRTILLITGILVLSIFSLRESYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTI
Ga0210002_10461831	3300027617	Arabidopsis Thaliana Rhizosphere	MDPNFYKSTISLIIGILVLPIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGSIDS
Ga0209818_12304021	3300027637	Agricultural Soil	MNKDYHFSIISSISVILVLSFFSLIATYSQNSEISVIVNLINGDKFIGQTWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNATQDLNRYSIFVDSSSTIDDVDVFGTIDSLTNNDNQIT
Ga0209971_11540921	3300027682	Arabidopsis Thaliana Rhizosphere	CNRTILLITGFLVLSIFSLSDSYSQASEMSVIVKLINTDKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0209485_10218721	3300027691	Agricultural Soil	MDPNFYNSTISLIIGILVLSIFSLTDIYSQNSEMSVIVKIINGDKFLAQTWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Ga0209485_10459492	3300027691	Agricultural Soil	MNKDYHFSIISSISVILVLSFFSLIATYSQNSEISVIVNLINGDKFIGQTWDINAQLKDKSSNSEISKDQTTFKVNQNQTIQMILPLSNATQDLNRYSIFVDSSSTIDDVDVFGTIDSLTNDNNQITLNLTNAR
Ga0209966_11743541	3300027695	Arabidopsis Thaliana Rhizosphere	MIFMDHNSCNPTILLITGILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIEDIDVFGTIDSVKKENNQITLNLTNAR
Ga0209593_100180971	3300027743	Freshwater Sediment	MDHKSCNPTILLITTILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDAASTIDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0209814_103678372	3300027873	Populus Rhizosphere	PNFFNSKISLLIGIVVLSIISLTDTYSQNSEMSVIVKIINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDVDVFGIIDSVKKENNQITLNLTNAR
Ga0209481_101114092	3300027880	Populus Rhizosphere	MDPNFFNSKISLIIGIVVLSIISLTDTYSQNSEMSVIVKIINGDKFLDQIWDINAQLRDKSTDSEVSKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDVDVFGIIDSVKKENNQITLNLTNAR
Ga0209382_115203191	3300027909	Populus Rhizosphere	MISMDHNSCNRTILLITGILVLSIFSLSDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTLDSLRKENNQITLNLTDAR
Ga0272482_102874331	3300028578	Soil	MIFMDHNSCNPTIFLITGILILSIFSLIDSYSQDSEMSVIVKLINAEKFLTQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0310887_108455081	3300031547	Soil	MIFMDHNSCNRTILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLN
Ga0307408_1014789462	3300031548	Rhizosphere	MDPNFYNSTISLIIGIFVLSIFSLTDTYSQNSEMSVIVKIIKGDKFLDQIWDINAQLRDKSTDSEISKDQTTFQVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDIFGKIDSVKKENNQITLNLSNAR
Ga0310886_101023242	3300031562	Soil	MIFMDHNSCNRTILLITGILVLSIFSLRESYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0307405_102551162	3300031731	Rhizosphere	MDPNFYNSTISLIIGIFVLSIFSLTDTYSQNSEMSVIVKIIKGDKFLDQIWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDVFGKIDSVKKENNQITLNLSNAR
Ga0307413_110321371	3300031824	Rhizosphere	MIFMDHNSCNRTILLITGILVLSIFSLSDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLNL
Ga0310907_108661751	3300031847	Soil	IDVYFMIFMDHNSCNRTILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0310892_104497061	3300031858	Soil	SLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0307407_115913441	3300031903	Rhizosphere	MDPNFYNSTISLIIGIFVLSIFSLTDTYSQNSEMSVIVKIIKGDKFLDQIWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDIFGKIDSVK
Ga0310900_101025712	3300031908	Soil	MDHNSCNPTILLITTILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVNENQTVQLIIPLSNSTKDLNRYSIFVDAASTVDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0307414_113459881	3300032004	Rhizosphere	MDPNFFNFKISLLIGIVVLSIISLTDTYSQNSEMSVIVKIINGDKFLDQIWDINAQLRDKSTDSEISKDQTTFKVNENQTIQLIIPLSNSTQDLNRYSIFVDASSTIDDIDIFGKIDSVKKENNQITLNLTNAR
Ga0310902_102268512	3300032012	Soil	TILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0310890_100103115	3300032075	Soil	MIFMDHNSCNRTILLITGILVLSIFSLRDSYSQDSEMSVIVKLINADKYLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTLDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0310890_100761591	3300032075	Soil	MIFMDHNSCNPTILLITTILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVNENQTVQLIIPLSNSTKDLNRYSIFVDAASTVDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0310895_100743472	3300032122	Soil	MDHNSCNRTILLITGILVLSIFSLIDSYSQDSEMSVIVKLINADKFLAQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDAASTVDDIDVFGTIDSLRKENNQITLNLTDAR
Ga0364927_0110224_346_750	3300034148	Sediment	MDHNSCNPTIFLITGILVLSIFSLIDSYSQDSEMSVIVKLINADKFLTQTWDVNAQLRDKSTDSEISQDQTTFTVSENQTVQLIIPLSNSTKDLNRYSIFVDASSTIDDIDVFGTIDSLRKENNQITLNLTDAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077757

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences