Metagenome / Metatranscriptome Family F077741

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077741
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	46 residues
Representative Sequence	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPAA
Number of Associated Samples	94
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.54 %
% of genes near scaffold ends (potentially truncated)	49.57 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.487 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere (9.402 % of family members)
Environment Ontology (ENVO)	Unclassified (54.701 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.684 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 73.33% β-sheet: 0.00% Coil/Unstructured: 26.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00313	CSD	37.61
PF13419	HAD_2	15.38
PF15919	HicB_lk_antitox	4.27
PF00687	Ribosomal_L1	4.27
PF05685	Uma2	4.27
PF02894	GFO_IDH_MocA_C	3.42
PF01408	GFO_IDH_MocA	3.42
PF02604	PhdYeFM_antitox	1.71
PF03681	Obsolete Pfam Family	1.71
PF04563	RNA_pol_Rpb2_1	0.85
PF00497	SBP_bac_3	0.85
PF16320	Ribosomal_L12_N	0.85
PF00873	ACR_tran	0.85
PF13442	Cytochrome_CBB3	0.85
PF00162	PGK	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0081	Ribosomal protein L1	Translation, ribosomal structure and biogenesis [J]	4.27
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	4.27
COG0673	Predicted dehydrogenase	General function prediction only [R]	3.42
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.71
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.71
COG0085	DNA-directed RNA polymerase, beta subunit/140 kD subunit	Transcription [K]	0.85
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.49 %
Unclassified	root	N/A	20.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.49 %
Unclassified	root	N/A	20.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.49 %
Unclassified	root	N/A	20.51 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.74 %
Unclassified	root	N/A	20.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	38.46 %
Unclassified	root	N/A	20.51 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.51 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	17.95 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.40 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	17.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.40 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	4.27 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3.42 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	17.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.40 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	4.27 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.56 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.85 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	17.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.40 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	4.27 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.56 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.85 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	17.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.40 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	4.27 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.56 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.85 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100810714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	773	Open in IMG/M
3300004631\|Ga0058899_11955623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	513	Open in IMG/M
3300004635\|Ga0062388_100762158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	912	Open in IMG/M
3300004803\|Ga0058862_10145291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	749	Open in IMG/M
3300005327\|Ga0070658_10006657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9363	Open in IMG/M
3300005327\|Ga0070658_11618962	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005330\|Ga0070690_100298964	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300005336\|Ga0070680_100388653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1188	Open in IMG/M
3300005337\|Ga0070682_101775278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	537	Open in IMG/M
3300005338\|Ga0068868_100072685	All Organisms → cellular organisms → Bacteria	2744	Open in IMG/M
3300005344\|Ga0070661_100752147	Not Available	797	Open in IMG/M
3300005458\|Ga0070681_10098162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2875	Open in IMG/M
3300005459\|Ga0068867_100826652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	828	Open in IMG/M
3300005534\|Ga0070735_10492365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	730	Open in IMG/M
3300005535\|Ga0070684_100573529	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005539\|Ga0068853_102313985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	521	Open in IMG/M
3300005548\|Ga0070665_100209588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1949	Open in IMG/M
3300005563\|Ga0068855_100125822	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300005563\|Ga0068855_101544626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	680	Open in IMG/M
3300005564\|Ga0070664_100765964	Not Available	901	Open in IMG/M
3300005564\|Ga0070664_101237799	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005577\|Ga0068857_101143504	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005577\|Ga0068857_101798427	Not Available	600	Open in IMG/M
3300005614\|Ga0068856_101711171	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005718\|Ga0068866_10585371	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005841\|Ga0068863_100367379	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300005843\|Ga0068860_100719951	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300006047\|Ga0075024_100105556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1240	Open in IMG/M
3300006052\|Ga0075029_100331123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	978	Open in IMG/M
3300006052\|Ga0075029_100916086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	602	Open in IMG/M
3300006172\|Ga0075018_10031532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2118	Open in IMG/M
3300006237\|Ga0097621_100356205	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300006354\|Ga0075021_10526896	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300006638\|Ga0075522_10052464	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
3300006638\|Ga0075522_10096477	Not Available	1609	Open in IMG/M
3300006640\|Ga0075527_10120163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	733	Open in IMG/M
3300006881\|Ga0068865_100760271	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300009011\|Ga0105251_10501547	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009093\|Ga0105240_12393881	Not Available	547	Open in IMG/M
3300009098\|Ga0105245_10585343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300009148\|Ga0105243_10094032	Not Available	2475	Open in IMG/M
3300009174\|Ga0105241_10601638	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300009176\|Ga0105242_10221213	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300009176\|Ga0105242_10321285	Not Available	1420	Open in IMG/M
3300009176\|Ga0105242_11634901	Not Available	679	Open in IMG/M
3300009176\|Ga0105242_12458535	Not Available	569	Open in IMG/M
3300009551\|Ga0105238_12166223	Not Available	590	Open in IMG/M
3300009551\|Ga0105238_12915999	Not Available	514	Open in IMG/M
3300010373\|Ga0134128_12661330	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300011120\|Ga0150983_11586823	Not Available	647	Open in IMG/M
3300011120\|Ga0150983_12716069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	580	Open in IMG/M
3300011120\|Ga0150983_16661422	Not Available	790	Open in IMG/M
3300012212\|Ga0150985_103888906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	664	Open in IMG/M
3300012362\|Ga0137361_10889472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	808	Open in IMG/M
3300012924\|Ga0137413_11834828	Not Available	501	Open in IMG/M
3300012931\|Ga0153915_11843015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	708	Open in IMG/M
3300012989\|Ga0164305_11345965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	626	Open in IMG/M
3300013104\|Ga0157370_10868962	Not Available	819	Open in IMG/M
3300013296\|Ga0157374_11412845	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300013308\|Ga0157375_11053233	Not Available	951	Open in IMG/M
3300013832\|Ga0120132_1054067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	782	Open in IMG/M
3300014159\|Ga0181530_10387909	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300014167\|Ga0181528_10392111	Not Available	756	Open in IMG/M
3300014325\|Ga0163163_10118101	All Organisms → cellular organisms → Bacteria	2684	Open in IMG/M
3300014325\|Ga0163163_11897709	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300014657\|Ga0181522_10524899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	714	Open in IMG/M
3300014838\|Ga0182030_10256176	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300014968\|Ga0157379_10263443	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300015195\|Ga0167658_1023296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1703	Open in IMG/M
3300015203\|Ga0167650_1015509	All Organisms → cellular organisms → Bacteria → Acidobacteria	2125	Open in IMG/M
3300016728\|Ga0181500_1148356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	567	Open in IMG/M
3300017792\|Ga0163161_10964950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	726	Open in IMG/M
3300018468\|Ga0066662_11369476	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300019256\|Ga0181508_1460484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	578	Open in IMG/M
3300020076\|Ga0206355_1138419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	602	Open in IMG/M
3300022532\|Ga0242655_10260394	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300025862\|Ga0209483_1141437	Not Available	1009	Open in IMG/M
3300025862\|Ga0209483_1259091	Not Available	668	Open in IMG/M
3300025899\|Ga0207642_10324533	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300025903\|Ga0207680_10208028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1336	Open in IMG/M
3300025909\|Ga0207705_10064044	Not Available	2657	Open in IMG/M
3300025912\|Ga0207707_10146252	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300025912\|Ga0207707_10493240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1045	Open in IMG/M
3300025913\|Ga0207695_10314900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1455	Open in IMG/M
3300025917\|Ga0207660_10633901	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300025921\|Ga0207652_11749309	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300025927\|Ga0207687_10563962	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300025927\|Ga0207687_10688322	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300025927\|Ga0207687_11371198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	608	Open in IMG/M
3300025931\|Ga0207644_10404422	Not Available	1116	Open in IMG/M
3300025931\|Ga0207644_11267989	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300025934\|Ga0207686_10418023	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300025934\|Ga0207686_11077595	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300025949\|Ga0207667_10119485	All Organisms → cellular organisms → Bacteria	2716	Open in IMG/M
3300026023\|Ga0207677_11905383	Not Available	552	Open in IMG/M
3300026078\|Ga0207702_11670573	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300026088\|Ga0207641_11905090	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300026089\|Ga0207648_10050390	All Organisms → cellular organisms → Bacteria → Acidobacteria	3641	Open in IMG/M
3300026116\|Ga0207674_10050448	All Organisms → cellular organisms → Bacteria	4251	Open in IMG/M
3300027894\|Ga0209068_10266309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	956	Open in IMG/M
3300027898\|Ga0209067_10529994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	671	Open in IMG/M
3300027915\|Ga0209069_10503607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	682	Open in IMG/M
3300027986\|Ga0209168_10164657	Not Available	1120	Open in IMG/M
3300028379\|Ga0268266_10025380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5041	Open in IMG/M
3300028381\|Ga0268264_11680315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	645	Open in IMG/M
3300028800\|Ga0265338_10933317	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300030923\|Ga0138296_1416332	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	665	Open in IMG/M
3300030923\|Ga0138296_1516032	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300030923\|Ga0138296_1804403	Not Available	527	Open in IMG/M
3300031234\|Ga0302325_10139274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4384	Open in IMG/M
3300031234\|Ga0302325_10470507	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300031740\|Ga0307468_100444166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1008	Open in IMG/M
3300032174\|Ga0307470_10149487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1426	Open in IMG/M
3300032515\|Ga0348332_14173072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	708	Open in IMG/M
3300033412\|Ga0310810_10161619	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
3300033412\|Ga0310810_10431895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1344	Open in IMG/M
3300033475\|Ga0310811_10267232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2006	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.43%
Environmental	Environmental	49.57%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	49.57%
Terrestrial	Environmental → Terrestrial	36.75%
Aquatic	Environmental → Aquatic	12.82%
Human	Host-Associated → Human	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	34.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.80%
Sediment	Environmental → Aquatic → Sediment	6.84%
Freshwater	Environmental → Aquatic → Freshwater	5.98%
Roots	Host-Associated → Plants → Roots	2.56%
Peat	Environmental → Terrestrial → Peat	1.71%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Digestive System	Host-Associated → Human → Digestive System	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.95%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	9.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.13%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.71%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1008107142	3300004479	Soil	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPAA*
Ga0058899_119556232	3300004631	Forest Soil	MSKTCGDMARFNRLRKQKINRRAKNRLLQAEIAARKAEKAAKPAA*
Ga0062388_1007621582	3300004635	Bog Forest Soil	MSKTCGDTARFHRLRKQKINRRARNRTLQAEIAARKAEKAANPVALKPAA*
Ga0058862_101452912	3300004803	Host-Associated	MSKTCGDTARFHRIRKQKINRRARNRTLQAEIAARKAEKTASAAASKPAA*
Ga0070658_100066577	3300005327	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRARNRTLQAEIAARKAEKSAGAAASKPAA*
Ga0070658_116189621	3300005327	Corn Rhizosphere	CGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA*
Ga0070690_1002989643	3300005330	Switchgrass Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA*
Ga0070680_1003886533	3300005336	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRTLQAEIAARKAEKTASAAASKPAA*
Ga0070682_1017752781	3300005337	Corn Rhizosphere	MSKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAVKPAA*
Ga0068868_1000726854	3300005338	Miscanthus Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPAA*
Ga0070661_1007521471	3300005344	Corn Rhizosphere	RFHRIRKQKINRRARNRTLQAEIAARKAEKSAGAAASKPAA*
Ga0070681_100981622	3300005458	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRALQAEIAARKAEKAAKPAV*
Ga0068867_1008266523	3300005459	Miscanthus Rhizosphere	IVMSKTCGDTARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPAA*
Ga0070735_104923653	3300005534	Surface Soil	MSKTCGDTARFHRLRKQKINRRAKNRALQAEIAARKAEKAAKP
Ga0070684_1005735291	3300005535	Corn Rhizosphere	PVLRKEKFMSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA*
Ga0068853_1023139851	3300005539	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRARNRTLQAEIAARKAEKSAGAA
Ga0070665_1002095881	3300005548	Switchgrass Rhizosphere	CGDTARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPAA*
Ga0068855_1001258225	3300005563	Corn Rhizosphere	MSKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPAA*
Ga0068855_1015446263	3300005563	Corn Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPTA*
Ga0070664_1007659641	3300005564	Corn Rhizosphere	SKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAVKPAA*
Ga0070664_1012377991	3300005564	Corn Rhizosphere	SKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPAA*
Ga0068857_1011435041	3300005577	Corn Rhizosphere	RKEKFMSKTCGDTARFHRIRKQKINRRAKNRALQAEIAARKAEKAAKPAV*
Ga0068857_1017984272	3300005577	Corn Rhizosphere	FHRIRKQKINRRAKNRTLQAEIAARKAEKTASAAASKPAA*
Ga0068856_1017111712	3300005614	Corn Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRALQAEIAARKAEKASKPAA*
Ga0068866_105853711	3300005718	Miscanthus Rhizosphere	FMSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA*
Ga0068863_1003673792	3300005841	Switchgrass Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIATRKAEKATKPAA*
Ga0068860_1007199511	3300005843	Switchgrass Rhizosphere	RAFPVLRKEKFMSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKATKPAA*
Ga0075024_1001055563	3300006047	Watersheds	MSKTCGDTARFHRLRKQKIARRARNRALQAEIAARKAANAEKSKPAA*
Ga0075029_1003311232	3300006052	Watersheds	MSKTCGDTARFHRIRKQKINRRAKNRLLQAEIAARKAEKAAKPAA*
Ga0075029_1009160862	3300006052	Watersheds	GDTARFHRIRKQKINRRAKNRILQAEIAVRKAEKAANASALKPAA*
Ga0075018_100315326	3300006172	Watersheds	SSTKKEKVMSKTCGDTARFHRLRKQKIARRARNRALQAEIAARKAANAEKSKPAA*
Ga0097621_1003562052	3300006237	Miscanthus Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKATKPAA*
Ga0075021_105268963	3300006354	Watersheds	TARFHRIRKQTINRRAKNRILQAEIAARKAEKAVKPAA*
Ga0075522_100524644	3300006638	Arctic Peat Soil	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPPA*
Ga0075522_100964771	3300006638	Arctic Peat Soil	CGDTARFHRLRKQKINRRAKNRLLQAEIAARKAEKAAKPAA*
Ga0075527_101201632	3300006640	Arctic Peat Soil	MSKTCGDTARFHRLRKQKINRRAKNRALQAEIAARKAEKAAKPAA*
Ga0068865_1007602712	3300006881	Miscanthus Rhizosphere	MSKTCGDTARFHRLRKQKINKRARIRELQAAIAAKKAAAEPKPAA*
Ga0105251_105015471	3300009011	Switchgrass Rhizosphere	RAFPVLRKEKFMSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA*
Ga0105240_123938811	3300009093	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPTA*
Ga0105245_105853432	3300009098	Miscanthus Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRALQAEISARKAANGEKAKPAA*
Ga0105243_100940324	3300009148	Miscanthus Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAVKPTA*
Ga0105241_106016381	3300009174	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPA
Ga0105242_102212131	3300009176	Miscanthus Rhizosphere	KTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKATKPAA*
Ga0105242_103212852	3300009176	Miscanthus Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKATKPAA*
Ga0105242_116349011	3300009176	Miscanthus Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKTAKPAA*
Ga0105242_124585351	3300009176	Miscanthus Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRALQAEIAARKAANGEKAKPAA*
Ga0105238_121662231	3300009551	Corn Rhizosphere	RLRKEKVMSKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAVKPAA*
Ga0105238_129159991	3300009551	Corn Rhizosphere	RKEKVMSKSCGDTARFHRIRKQKINRRAKNRILQSEIAARKAEKAAKPAA*
Ga0134128_126613302	3300010373	Terrestrial Soil	MSKTGGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA*
Ga0150983_115868232	3300011120	Forest Soil	MSKTCGDTARFHRLRKQKINRRARNRALQAEIAARKAEKAANPIALKPAA*
Ga0150983_127160692	3300011120	Forest Soil	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKSAKPAA*
Ga0150983_166614221	3300011120	Forest Soil	MSKTCGDTARFHRLRKQKINRRAKNRLLQAEIAARKAEKAAKPAA*
Ga0150985_1038889062	3300012212	Avena Fatua Rhizosphere	MSKTCGDTARFHRLRKQKINRRARNRELQAEIAARKAAAADKAKPAA*
Ga0137361_108894721	3300012362	Vadose Zone Soil	KKEKVMSKTCGDTARFHRLRKQKIARRARNRALQAEIAARKAATTEKSKPAA*
Ga0137413_118348282	3300012924	Vadose Zone Soil	MSKTCGDTARFHRLRKQKINRRARNRALQAEIAARKAEKAATAVALKPAA*
Ga0153915_118430153	3300012931	Freshwater Wetlands	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAVKPAA*
Ga0164305_113459651	3300012989	Soil	STKKEKVMSKTCGDTARFHRLRKQKIARRARNRALQAEIAARKAANAEKSKPAA*
Ga0157370_108689622	3300013104	Corn Rhizosphere	VRKQKINRRAMNRTLQAEIAARKAEKTAGAAASKPAA*
Ga0157374_114128451	3300013296	Miscanthus Rhizosphere	KEKFMSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAAHKAEKAAKPAA*
Ga0157375_110532331	3300013308	Miscanthus Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPTT*
Ga0120132_10540672	3300013832	Permafrost	MSKTCGDTARFHRIRKQKINRRARNRALQAEIAARKAEKAAKPAA*
Ga0181530_103879092	3300014159	Bog	MSKTCGDTARFHRLRKQRIANRMKVRALRAAIAAKKAAEPPKPAA*
Ga0181528_103921112	3300014167	Bog	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAVKAASAVALKPAA*
Ga0163163_101181017	3300014325	Switchgrass Rhizosphere	AFPVSRKEKFMSKTCGDTARFHRIRKQKINRRAKNRALQAEIAARKAEKAAKPAV*
Ga0163163_118977091	3300014325	Switchgrass Rhizosphere	RKEKFMSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA*
Ga0181522_105248991	3300014657	Bog	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKSA
Ga0182030_102561763	3300014838	Bog	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAVKAASAVALKPAA*
Ga0157379_102634433	3300014968	Switchgrass Rhizosphere	MSKTCGDTARFHRICKQKINRRAKNRILQAEIAARKAEKAAKPAA*
Ga0167658_10232962	3300015195	Glacier Forefield Soil	MSKTCGDTARFHRLRKQKINRRARNRALQAEIAARKAEKAATALALKPAA*
Ga0167650_10155094	3300015203	Glacier Forefield Soil	STKKEKVMSKTCGDTARFHRLRKQKIARRARNRALQAEIAARKAANTEKAKPAA*
Ga0181500_11483561	3300016728	Peatland	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARK
Ga0163161_109649502	3300017792	Switchgrass Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRVLQAESAARKAEKAAKPA
Ga0066662_113694762	3300018468	Grasslands Soil	MSKTCGDTARFHRLRKQKIARRARNRALQAEIAERKAAANAEKSKPAA
Ga0181508_14604842	3300019256	Peatland	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKA
Ga0206355_11384193	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRTLQAEIAARKAEKT
Ga0242655_102603941	3300022532	Soil	RVLMSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPAA
Ga0209483_11414373	3300025862	Arctic Peat Soil	MSKSCGDTARFHRLRKQKIRMRMRVRELKAAIAERTATADPAKPKA
Ga0209483_12590912	3300025862	Arctic Peat Soil	FHRLRKQKINRRAKNRLLQAEIAARKAEKAAKPAA
Ga0207642_103245331	3300025899	Miscanthus Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA
Ga0207680_102080282	3300025903	Switchgrass Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPAA
Ga0207705_100640443	3300025909	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRARNRTLQAEIAARKAEKSAGAAASKPAA
Ga0207707_101462522	3300025912	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRALQAEIAARKAEKAAKPAV
Ga0207707_104932402	3300025912	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRTLQAEIAARKAEKTASAAASKPAA
Ga0207695_103149004	3300025913	Corn Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPTA
Ga0207660_106339011	3300025917	Corn Rhizosphere	IPVLRKEKFMSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA
Ga0207652_117493092	3300025921	Corn Rhizosphere	AFPVLRKEKFMSKTCGDTARFHRIRKQKINRRAKNRALQAEIAARKAEKAAKPAV
Ga0207687_105639621	3300025927	Miscanthus Rhizosphere	TARFHRLRKQKINKRARIRELQAAIAAKKAAAEPKPAA
Ga0207687_106883222	3300025927	Miscanthus Rhizosphere	MSKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAVKPAA
Ga0207687_113711981	3300025927	Miscanthus Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRALQAEISARKAANGEKAKPAA
Ga0207644_104044223	3300025931	Switchgrass Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAK
Ga0207644_112679891	3300025931	Switchgrass Rhizosphere	ARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPAA
Ga0207686_104180233	3300025934	Miscanthus Rhizosphere	MSKTCGDTARFHRLRKQKINKRARIRELQAAIAAKKAAAEP
Ga0207686_110775952	3300025934	Miscanthus Rhizosphere	FMSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA
Ga0207667_101194854	3300025949	Corn Rhizosphere	MSKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPAA
Ga0207677_119053831	3300026023	Miscanthus Rhizosphere	TARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPTT
Ga0207702_116705732	3300026078	Corn Rhizosphere	MSKTCGDTARFHRLRKQKINRRAKNRALQAEIAARKAEKASKPAA
Ga0207641_119050902	3300026088	Switchgrass Rhizosphere	ARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA
Ga0207648_100503901	3300026089	Miscanthus Rhizosphere	TARFHRIRKQKINRRAKNRVLQAEIAARKAEKAAKPAA
Ga0207674_100504485	3300026116	Corn Rhizosphere	MSKTCGDTARFHRIRKQKINRRAKNRALQAEIAARKAEKAAKPAA
Ga0209068_102663091	3300027894	Watersheds	MSKTCGDTARFHRLRKQKIARRARNRALQAEIAARKAANAEKSKPAA
Ga0209067_105299942	3300027898	Watersheds	MSKTCGDTARFHRIRKQKINRRAKNRVLQAEIAARKAEKAGKPAA
Ga0209069_105036071	3300027915	Watersheds	MSKTCGDTARFHRIRKQRINMRARVRALRAEIALKNANKTVVATDA
Ga0209168_101646574	3300027986	Surface Soil	PLRKEKVMSKTCGDTARFHRIRKQKINRRARNRTLQAEIAARKAEKTAGAAASKPAA
Ga0268266_100253808	3300028379	Switchgrass Rhizosphere	ARFHRLRKQKINRRAKNRILQAEIAARKAEKAAKPAA
Ga0268264_116803152	3300028381	Switchgrass Rhizosphere	FHRLRKQKINRRAKNRILQAEIAARKAEKAAKPAA
Ga0265338_109333171	3300028800	Rhizosphere	KVMSKTCGDTARFHRLRKQKINRRAKNRMLQAEIAARKAEKAAKPAA
Ga0138296_14163322	3300030923	Soil	MSKTCGDTARFHRLRKQKINRRAKNRILQAEIAVRKAEKSRQARSVEV
Ga0138296_15160322	3300030923	Soil	ARFHRLRKQKINRRARNRALQAEIAARKAEKTATAVTLKPAA
Ga0138296_18044032	3300030923	Soil	GDTARFHRLRKQKIARRARNRALQAEIAARKAATTEKSKPAA
Ga0302325_101392742	3300031234	Palsa	MSKTCGDTARFHRLRKQKINRRARNRALQAEIAARKAEKAANPVALNPAA
Ga0302325_104705072	3300031234	Palsa	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAVKAASAVALKPAA
Ga0307468_1004441662	3300031740	Hardwood Forest Soil	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKTANASALKPAA
Ga0307470_101494872	3300032174	Hardwood Forest Soil	MSKTCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKTAKPAA
Ga0348332_141730721	3300032515	Plant Litter	MSKTCGDTARFHRLRKQKIAKRTKIRELRAAVEARNEAKKAAAPQPA
Ga0310810_101616191	3300033412	Soil	MSKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKA
Ga0310810_104318954	3300033412	Soil	KVMSKSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAVKPAA
Ga0310811_102672324	3300033475	Soil	KSCGDTARFHRIRKQKINRRAKNRILQAEIAARKAEKAAKPAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077741

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences