Metagenome / Metatranscriptome Family F077738

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077738
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	71 residues
Representative Sequence	LTKKPSNAKAWTSDENERLRELVISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK
Number of Associated Samples	86
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.24 %
% of genes near scaffold ends (potentially truncated)	45.30 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (70.940 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (44.444 % of family members)
Environment Ontology (ENVO)	Unclassified (46.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.299 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126. 1A2_v1_00195400 2A2_v1_00166770 3A_all_C_03349270 4N55_00367650 5JGI12635J15846_103122721 6JGI12053J15887_103300752 7Ga0070711_1018943322 8Ga0080026_101419431 9Ga0066789_100953633 10Ga0066789_101740513 11Ga0075018_100529581 12Ga0075014_1007989261 13Ga0075021_102133664 14Ga0099791_104182621 15Ga0099795_102031913 16Ga0099829_100220103 17Ga0099829_104697932 18Ga0099828_118073901 19Ga0099827_120134411 20Ga0099792_109430222 21Ga0105856_13128092 22Ga0099796_101153611 23Ga0099796_101654411 24Ga0126354_10869462 25Ga0126356_105864781 26Ga0126356_112624502 27Ga0137392_101826723 28Ga0137391_100035428 29Ga0137391_114005621 30Ga0137393_103403413 31Ga0137393_106065281 32Ga0137393_107499651 33Ga0137388_100884935 34Ga0137388_109224921 35Ga0137399_106303033 36Ga0137399_109250421 37Ga0137362_109109272 38Ga0137362_113953362 39Ga0137385_101609261 40Ga0137390_104528011 41Ga0137397_101428364 42Ga0137397_102941822 43Ga0137397_110418911 44Ga0137396_104086541 45Ga0137394_107912093 46Ga0137359_102808253 47Ga0137359_104524742 48Ga0137413_107116781 49Ga0137413_109853541 50Ga0137419_101968801 51Ga0137419_104202093 52Ga0137404_100099907 53Ga0137404_100469993 54Ga0137407_100299874 55Ga0164300_105939503 56Ga0164302_101157304 57Ga0164309_104459941 58Ga0164304_113587301 59Ga0137405_12178551 60Ga0137420_11042593 61Ga0137420_14398262 62Ga0137418_100066785 63Ga0184605_105021641 64Ga0184608_100887944 65Ga0137408_13081758 66Ga0193712_10780401 67Ga0193713_10080844 68Ga0193729_10237821 69Ga0193729_10377381 70Ga0193729_10386782 71Ga0193729_11269571 72Ga0193728_10786603 73Ga0193731_10185731 74Ga0193726_12099022 75Ga0179594_100663052 76Ga0222623_101884752 77Ga0137417_11467311 78Ga0137417_12523281 79Ga0209838_10026435 80Ga0209838_10035751 81Ga0209438_10854351 82Ga0209438_12200851 83Ga0209839_102304612 84Ga0209240_12925561 85Ga0209131_11984322 86Ga0257173_10659791 87Ga0257152_10301421 88Ga0257171_10619792 89Ga0257171_10710701 90Ga0257154_10255423 91Ga0257155_10194812 92Ga0257164_10238421 93Ga0257168_10709501 94Ga0208212_1001274 95Ga0209179_11483702 96Ga0209734_11221451 97Ga0208981_11749162 98Ga0209588_10955211 99Ga0209588_11746022 100Ga0208991_11357342 101Ga0209180_102440643 102Ga0209180_106449401 103Ga0209488_105643232 104Ga0209488_108379091 105Ga0209526_102051892 106Ga0209526_105535011 107Ga0307290_101418862 108Ga0307305_101189501 109Ga0307292_100774661 110Ga0307302_104924202 111Ga0307296_104802841 112Ga0307310_105105282 113Ga0307312_100279276 114Ga0307312_101772541 115Ga0307278_102053102 116Ga0307277_100426561 117Ga0307277_101493921
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126. 1A2_v1_00195400 2A2_v1_00166770 3N55_00367650 4Ga0080026_101419431 5Ga0066789_101740513 6Ga0075018_100529581 7Ga0099791_104182621 8Ga0099829_100220103 9Ga0099796_101654411 10Ga0126354_10869462 11Ga0137393_103403413 12Ga0137393_107499651 13Ga0137397_110418911 14Ga0137419_104202093 15Ga0137404_100099907 16Ga0137404_100469993 17Ga0164300_105939503 18Ga0184605_105021641 19Ga0184608_100887944 20Ga0193712_10780401 21Ga0193729_10377381 22Ga0193729_10386782 23Ga0209839_102304612 24Ga0257173_10659791 25Ga0209488_105643232 26Ga0307277_100426561
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 1Ga0137394_107912093 2A2_v1_00195400 3A_all_C_03349270 4Ga0070711_1018943322 5Ga0080026_101419431 6Ga0066789_101740513 7Ga0075018_100529581 8Ga0075014_1007989261 9Ga0099791_104182621 10Ga0099829_104697932 11Ga0099796_101654411 12Ga0126354_10869462 13Ga0126356_112624502 14Ga0137393_103403413 15Ga0137393_107499651 16Ga0137399_106303033 17Ga0137399_109250421 18Ga0137362_113953362 19Ga0137396_104086541 20Ga0137419_104202093 21Ga0164300_105939503 22Ga0164302_101157304 23Ga0137418_100066785 24Ga0184608_100887944 25Ga0137408_13081758 26Ga0193729_10377381 27Ga0193729_10386782 28Ga0179594_100663052 29Ga0209240_12925561 30Ga0208212_1001274 31Ga0208981_11749162 32Ga0209588_10955211 33Ga0209488_105643232 34Ga0307278_102053102 35Ga0307277_100426561 36Ga0307277_101493921
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.91% β-sheet: 0.00% Coil/Unstructured: 68.09%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13467	RHH_4	2.56
PF02776	TPP_enzyme_N	1.71
PF00589	Phage_integrase	1.71
PF00561	Abhydrolase_1	0.85
PF00892	EamA	0.85
PF00696	AA_kinase	0.85
PF00816	Histone_HNS	0.85
PF05638	T6SS_HCP	0.85
PF13489	Methyltransf_23	0.85
PF05239	PRC	0.85

Showing 1 to 10 of 17 entries

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COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.85
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.85
COG2916	DNA-binding protein H-NS	Transcription [K]	0.85
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.85
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.94 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.94 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.94 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.54 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.68 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	55.56 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	51.28 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	39.32 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	5.13 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	7.69 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.71 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	5.13 %
Unclassified	root	N/A	29.06 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	6.84 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	7.69 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.71 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	3.42 %
Bradyrhizobium sp. Oc8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Oc8	0.85 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	0.85 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.85 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.85 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	5.13 %
Unclassified	root	N/A	29.06 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908029\|A2_v1_NODE_10847_len_11963_cov_9_083173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12013	Open in IMG/M
2124908029\|A2_v1_NODE_38145_len_8048_cov_18_734095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8098	Open in IMG/M
2140918007\|ConsensusfromContig118952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2515	Open in IMG/M
2189573000\|GPBTN7E01EB2HX	Not Available	528	Open in IMG/M
3300001593\|JGI12635J15846_10312272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	978	Open in IMG/M
3300001661\|JGI12053J15887_10330075	Not Available	741	Open in IMG/M
3300005439\|Ga0070711_101894332	Not Available	524	Open in IMG/M
3300005952\|Ga0080026_10141943	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005994\|Ga0066789_10095363	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005994\|Ga0066789_10174051	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M

Showing 1 to 10 of 116 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.13%
Terrestrial	Environmental → Terrestrial	94.87%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	5.13%
Soil	Environmental → Terrestrial → Soil	94.87%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.98%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	67.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.13%

Habitat	Taxonomy	Distribution
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	44.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908029	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M

Showing 1 to 10 of 86 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_v1_00195400	2124908029	Soil	IPKNEHDSGENHTKKTNKTKAWTLDQDERLRELIISNASIIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK
A2_v1_00166770	2124908029	Soil	LTSRLVTLFLARRTDAKKLNNAKTWTSDEDERLRELVISNVSVIDIAADLGRTVKAVRARAHTLRIALGRSRFRVKTKAK
A_all_C_03349270	2140918007	Soil	LTSRFVSLFIPRRTDAKKLNNAKTWTSDEDERLRELVISNASVIDIAADLGRTVVAVRARAQALRIAPRRSRFRVKANAK
N55_00367650	2189573000	Grass Soil	MAQLATQKINSAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVSAVRARAQTLRISLGSWRFGMKAKGK
JGI12635J15846_103122721	3300001593	Forest Soil	MGTAGEIPKNERDSGENHTKKTNKTKAWTLDQDERLRELIISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK*
JGI12053J15887_103300752	3300001661	Forest Soil	GNEHAPGETDAKKLNNAKAWTSDEDERLRELVISNASVFDIAADLGRTVVAVRAHAHALRIALGRSRFGVKAKAK*
Ga0070711_1018943322	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAQLATKKINTSKAWTADEDERLRKLIISNVPAFDIAADLGRTVTAVIARAQALRIPRGSSRFGMKAKGK*
Ga0080026_101419431	3300005952	Permafrost Soil	MGTAGEIPKNEHDSGENHTKNPNKTKAWTSDEDERLRELVISNVSVTDIAAELGRTVKAVRARAHALRI
Ga0066789_100953633	3300005994	Soil	EPRVEIPKNEHDSGENHTKKTNKTKAWTLDQDERLRELIISNASIIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK*
Ga0066789_101740513	3300005994	Soil	WTSDEDERLRELVISNASLFDIALELGRTVVAVKAHAHVIGIALRRSRFRVKEKAK*
Ga0075018_100529581	3300006172	Watersheds	MRAWISDDDQRLRELIISNASVFDIAADLGRTVVAVRARAHALRIALGRSRFRVKANAK*
Ga0075014_1007989261	3300006174	Watersheds	LTSRLVSLSYPRRNDAKKLNNAKTWTSDEDERLRELVISNVSVIDIAADLGRTVKAVRARAHTLRITLGRSRFRVKTKAK*
Ga0075021_102133664	3300006354	Watersheds	LTSRLVSLSYPRRTDAKKLNNAKTWTSDEDERLRELVISNVSVIDIAADLGRTVKAVRARAHTLRITLGRSRFRGKNKGKMT*
Ga0099791_104182621	3300007255	Vadose Zone Soil	MSRPPEKPKRKNNNVRAWTSGEDERLRKLIISNASVIDIAADLGRTVKAVRARAHRLRIALGRSRFRVKAK*
Ga0099795_102031913	3300007788	Vadose Zone Soil	MSRPPEKPKRKNRAWTSGDDERLLQLIISNASVIDIAAELGRTVKAVRARALRLRIALGRSRFRVKPK*
Ga0099829_100220103	3300009038	Vadose Zone Soil	MRGSRSRKTSITPEKIIRKSPSNTKAWTSDEEKRLRKLIISNASVLDIADDLGRTVKAVRARAHALRIALGRSRFRIKANPRK*
Ga0099829_104697932	3300009038	Vadose Zone Soil	MAQLATKKINNAKAWTSDEDKRLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRFRMKAKGK*
Ga0099828_118073901	3300009089	Vadose Zone Soil	TDGKKLNNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTLSAVRSRAQALRISLGSSRFRMKAKGK*
Ga0099827_120134411	3300009090	Vadose Zone Soil	HDSGENHTKKPSNAKAWTSDENERLRELVISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK*
Ga0099792_109430222	3300009143	Vadose Zone Soil	MAQLAPQKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVPAVRARAQALRISLGSSRFWMKAKGK*
Ga0105856_13128092	3300009662	Permafrost Soil	LTSRLVSLSYPRRTDAKKLNNAKTWTSDEDERLRELVISNVSVIDIAADLGRTVKPVRARAYALRISRGRSRFLVKTKAK*
Ga0099796_101153611	3300010159	Vadose Zone Soil	AWTSDEDERLREFVISNASLFDISLELGRTVVAVKARAHAIGIALRRSRFRVKEKAK*
Ga0099796_101654411	3300010159	Vadose Zone Soil	QIVFLTVSQIPKNEHDAGENPYEKASNTAWTADENERLRELIISNASVIDIAADLGRTVKAVRARAHRLRIALGRSRFRVKAK*
Ga0126354_10869462	3300010857	Boreal Forest Soil	LSDPWRSTGRTPYPGETDGKKLNNAKAWTSDEDERLRELVISNVSVINIAADLGRTVKAVRARAHALRIALGRSRFRIKARVK*
Ga0126356_105864781	3300010877	Boreal Forest Soil	MIPEKPKRKNNNRRAWTSGEDERLLQLIISNVSVIDIAAELGRTVRGVSARAYALRIALGRSRFRVKPK*
Ga0126356_112624502	3300010877	Boreal Forest Soil	MSRPPEKPKQKDNNARAWTSGEDERLLQLVISNVSVIDIAADLGRTEKAVRARALRLRIALGRSRFPVKAK*
Ga0137392_101826723	3300011269	Vadose Zone Soil	MRGSRSRKTSITPEKIIRKSPSNTKAWTSDEEKRLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVKANPRNDAG*
Ga0137391_100035428	3300011270	Vadose Zone Soil	MSRPPEKPKRKNNNARAWTSGEDERLLQLIISNASVIDIAAELGRTVRAVSARTYALRIALGRSRFRVKPK*
Ga0137391_114005621	3300011270	Vadose Zone Soil	INNCKAWTSDEDERLREFVISNASLFDIADELGRTVVAVKARAHAIGIALRRSRFRVKEKAK*
Ga0137393_103403413	3300011271	Vadose Zone Soil	MTPEKLMRKKINNAKAWTSDEDKRLRQPVISNASVFDIAADLGRTVVAVRAGAHALRIALGRSRFRVNAKAR*
Ga0137393_106065281	3300011271	Vadose Zone Soil	RLIRFPWEPRVEIPKNEHDSGENHTKKPSNAKAWTSDENERLRELVISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK*
Ga0137393_107499651	3300011271	Vadose Zone Soil	MSGETETKKSYKAWTSGEDERLLQLIISNASVIDIAAELGRTVRAVSARTYALRIALGRSRFRVKPK*
Ga0137388_100884935	3300012189	Vadose Zone Soil	MAQLATKKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTLSAVRSRAQALRISLGSSRFRMKAKGK*
Ga0137388_109224921	3300012189	Vadose Zone Soil	PKNEHDSGENHTKKPSNTKAWTSEEDERLRKLIISNASVLDIADDLGRTVKAVRARAHALRIALGRSRFRIKANPRK*
Ga0137399_106303033	3300012203	Vadose Zone Soil	WTSDENERLREFVISNASLFDISLELGRTVVAVKARAHAIGIALRSSRFRVKEKAK*
Ga0137399_109250421	3300012203	Vadose Zone Soil	MSRPPEKPKRKIARAWTSGDDERLRQLVISNASVIDIAADLGRTEKAVMARAHRLRFALGRSRFRVK
Ga0137362_109109272	3300012205	Vadose Zone Soil	KAWTSDEDERLRKLIISNAPAFDIAADLGRTVSAVRARAQALRIPRGSSRFGMKAKGK*
Ga0137362_113953362	3300012205	Vadose Zone Soil	MAQLATKKVNNAKAWTSDDDERLRKLIIHNDPALERAADLRRTLSAVRSRAQALRISLGSSRFRMKAKGK*
Ga0137385_101609261	3300012359	Vadose Zone Soil	HDSGENHTKKPSNTKAWTSDENERLRKLIISNASVLDIAVDLGRTVKAVRARAHALRIALGRSRFRVKAKAK*
Ga0137390_104528011	3300012363	Vadose Zone Soil	AKAWTSDEDKRLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRFRMKAKGK*
Ga0137397_101428364	3300012685	Vadose Zone Soil	MSPEKPKRKNRAWTSGDDERLLQLIISNASVIDIAAELGRTVKAVRARALRLRIALGRSRFRVKPK*
Ga0137397_102941822	3300012685	Vadose Zone Soil	VRAWTSGEDERLRKLIISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK*
Ga0137397_110418911	3300012685	Vadose Zone Soil	LTKKPSNAKAWTSDENERLRELVISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAK
Ga0137396_104086541	3300012918	Vadose Zone Soil	MSRPPDKQKRKNKNATSGEDERLLQLIISNVSVIDIAAELGRTVKAVRARAHALRIALGRSRFRVKAKAK*
Ga0137394_107912093	3300012922	Vadose Zone Soil	LTKKPSNAKAWTSDENERLRELVISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK*
Ga0137359_102808253	3300012923	Vadose Zone Soil	MAQLATKKVNNAKAWTSDDDERLRKLIISNAPAFEIAADLGRTVSAVRARAQALRISLGSSRFRMKAKGK*
Ga0137359_104524742	3300012923	Vadose Zone Soil	MAQLATQKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRFRMKAKGK*
Ga0137413_107116781	3300012924	Vadose Zone Soil	KPSNTKAWTSDEDERLRKLIISNASVLDIAADLGRTVKAARARAHALRIALGRSRFRVRANLRNDTG*
Ga0137413_109853541	3300012924	Vadose Zone Soil	RVEIPKNEHDSGENHTKKPSNTKAWTSEEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVNAKAK*
Ga0137419_101968801	3300012925	Vadose Zone Soil	KKPSNTKAWTSEEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVNAKAK*
Ga0137419_104202093	3300012925	Vadose Zone Soil	CPGPGETETKKLNKAKAWTSGEDERLRQLIISNVSVIDIAADLGRTVKAVKARAHRLRIALGRSRFRVKAN*
Ga0137404_100099907	3300012929	Vadose Zone Soil	MTPEKIIRKSQDEDERLRKLIISNTSVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAK*
Ga0137404_100469993	3300012929	Vadose Zone Soil	MKSLHGSEGMIPEKPKRKNNNRRAWTSGEDERLLQLIISNVSVIDIAAELGRTVRGVSARAYALQIALGRSRFRVKPK*
Ga0137407_100299874	3300012930	Vadose Zone Soil	MSRPPEKPKRKNNNARAWTSGEDERLLQLIISNASVIDIAAELGRTVKAVRARVHAQRIALGRSRFRVKAK*
Ga0164300_105939503	3300012951	Soil	LGRKKIIKAWTSDEDERLRKLIISNVPAFDIAADLGRTVTAVIARAQALHIPRGRSRFKMKAKGK*
Ga0164302_101157304	3300012961	Soil	VIGLIAQLGTKKINSAKAWTSGEDERLRKLIISNAPAFDIAADLGRTVTAVIARAQALRIPRGSSRFRMKEK*
Ga0164309_104459941	3300012984	Soil	MAQLATQKINSAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRFRMKAKGK*
Ga0164304_113587301	3300012986	Soil	MAQLATKKINTSKAWTADEDERLRKLIISNVPAFDIAADLGRTVTAVIARAQALRIPRGSSRFGMKAKG
Ga0137405_12178551	3300015053	Vadose Zone Soil	MTPEKIIRKSQDEDERLRKLIISNTSVIDIAADLGRTVKAVRARAHALRRARA
Ga0137420_11042593	3300015054	Vadose Zone Soil	ENHTKKPSNTKAWTSEEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVNAKAK*
Ga0137420_14398262	3300015054	Vadose Zone Soil	TKAWTSEEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVNAKAK*
Ga0137418_100066785	3300015241	Vadose Zone Soil	LTSRLVSLSYPGETDAKKINNAKAWTSDEDERLRELTISNVLVFDIAADLGRTVVAVRARAHALRISLGRSRFGVKAKAK*
Ga0184605_105021641	3300018027	Groundwater Sediment	RQKRTSPRRREHGNEHDPGETETKKLNNAKAWTSGEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK
Ga0184608_100887944	3300018028	Groundwater Sediment	VTTAASRSMAQLATKKINNAKAWTSDEEERLRKLIISNAPVFDIAADLGRTVVAVRTRAQVLRISLGRSRFRKKAKDK
Ga0137408_13081758	3300019789	Vadose Zone Soil	MKSLHGSEGMIPEKPKRKNNNRRAWTSGEDERLLQLIISNVSVIDIAAELGRTVRGVSARAYALQIALGRSRFRVKPK
Ga0193712_10780401	3300019880	Soil	FLRSFPCAAAFAINSIPVGTADQDSENEHDSGENHTKKPSNTKAWTSEGDERLRKLIISNASVLDIAADLGRTVKAVRARAHAQRIALGRSRFRVKAK
Ga0193713_10080844	3300019882	Soil	MIPEKPKRNNARAWTSGEDERLLQLIISNASVIDIAAELGRTVKAVRARAHALRIALGRSRFRVKAKAK
Ga0193729_10237821	3300019887	Soil	KTKAWTLDQDERLRELIISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK
Ga0193729_10377381	3300019887	Soil	EITTRRINNCKAWTSDEDERLREFVISNASLFDIADELGRTVVAVKARAHAIGIALRRSRFMVKEKAR
Ga0193729_10386782	3300019887	Soil	MRWVSLFRKTELKPAVSRAGNEHEPGETDGKKLNNAKAWTTDEDERLRELVISNASVFDIAADLGRTVVAVRARAHALRIALGHSRFRANAKAK
Ga0193729_11269571	3300019887	Soil	KTKAWTLDQDERLRELIISNASVIDIAADLGRTVKAVRARAHTLRIALGRSRFGVKAKSK
Ga0193728_10786603	3300019890	Soil	CEKTNNAKTWTSDEDERLRELVISNVSVIDIAADLGRTVKAVRARAHTLRIALGRSRFRVKTKAK
Ga0193731_10185731	3300020001	Soil	KQRSLRRREPGNELAPGETDTKKLNNAKAWTSDEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRMALGRSRFRVKAK
Ga0193726_12099022	3300020021	Soil	MSRPPEKPKRKNNNARAWTSGEDERLLQLIISNASVIDIAAELGRTVKAVRARAHALRIALGRSRFRVKAK
Ga0179594_100663052	3300020170	Vadose Zone Soil	MTPEKIIRKSQDEDERLRKLIISNTSVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAK
Ga0222623_101884752	3300022694	Groundwater Sediment	MAQLATKKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRLRIRAKGK
Ga0137417_11467311	3300024330	Vadose Zone Soil	SNTKAWTSEEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVNAKA
Ga0137417_12523281	3300024330	Vadose Zone Soil	ENHTKKPSNTKAWTSEEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVNAKAK
Ga0209838_10026435	3300026214	Soil	LTSRLVSLSYPRRTDAKKLNNAKTWTSDEDERLRELVISNVSVIDIAADLGRTVKAVRARAHTLRIALGRSRFRVKTKAK
Ga0209838_10035751	3300026214	Soil	KKINNAKAWTSDEDKRLRELVISNASVFDIAADLGRTVVAVRARAHALRIALGRSRFRVKANAK
Ga0209438_10854351	3300026285	Grasslands Soil	MAQLATQKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRFRMKAKGK
Ga0209438_12200851	3300026285	Grasslands Soil	MAQLATKKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTLSAVRSRAQALRISLGSSRFRMKAKGK
Ga0209839_102304612	3300026294	Soil	HSRLIQFLWETAGRDPESGENHTKKPSNTKAWTSDENERLRELVISNVSVVDIAADLGRTVKAVRARAHALRIALGRSRFRVKANAK
Ga0209240_12925561	3300026304	Grasslands Soil	MAQLATQKINNAKAWTSDEDERLRKLVISNAPAFDIAADLGRTVTAVITRAQALRIPRRSSRFRMKAKGK
Ga0209131_11984322	3300026320	Grasslands Soil	MAQLATKKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRFRVKAKRK
Ga0257173_10659791	3300026360	Soil	LVSLRRREPGNEHAPGETDAKKINNAKAWTSDEDERLRELVISNVSVIDIAAELGRTVKAVRARALRLRIALGRSRFQVKAK
Ga0257152_10301421	3300026369	Soil	MAQLATKKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRFRMKAKGK
Ga0257171_10619792	3300026377	Soil	WTSEEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVNAKAK
Ga0257171_10710701	3300026377	Soil	MSRPPEKPKRKNRAWTSGDDERLLQLIISNASVIDIAAELGRTVKAVRARALRLRIALGRSRFR
Ga0257154_10255423	3300026467	Soil	RDPSGENHTKKPSNTKAWTSDENERLRELIISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK
Ga0257155_10194812	3300026481	Soil	DSGENHTKKPSNTKAWTSEEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVNAKAK
Ga0257164_10238421	3300026497	Soil	MAQLATKKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTLSAVRSRAQALRISLGSSRFRMKAK
Ga0257168_10709501	3300026514	Soil	RRINNCKAWTSDEDERLREFVISNASLFDIADELGRTVVAVKARAHAIGIALRRSRFRVKEKAK
Ga0208212_1001274	3300026687	Soil	LTSRLVSLSYPGETDAKKINNAKAWTSDEDKRLRELVISNVSVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKANAK
Ga0209179_11483702	3300027512	Vadose Zone Soil	MSRPPEKPKRKNRAWTSGDDERLLQLIISNASVIDIAADLGRTVKAVRARALRLRIALGRSRFRVKPK
Ga0209734_11221451	3300027535	Forest Soil	RLIRFQWEPRVEIPKNERDSGENHTKKTNKTKAWTLDQDERLRELIISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK
Ga0208981_11749162	3300027669	Forest Soil	MSRPPEKPKRKNNNARAWSSSEDERLLQLVISNASVIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK
Ga0209588_10955211	3300027671	Vadose Zone Soil	SDEDERLRELVISNASLFDIALELGRTVVAVTAREHAKGIALRRSRFTVKEKAR
Ga0209588_11746022	3300027671	Vadose Zone Soil	MTPEKPKRKNNNARAWTSGEDERLLQLIISNASVIDIAAELGRTVKAVRARAHALRIALGRSRFRVKPK
Ga0208991_11357342	3300027681	Forest Soil	APGETDAKKLNNAKAWTSDEDERLRELVISNASVFDIAADLGRTVVAVRAHAHALRIALGRSRFGVKAKAK
Ga0209180_102440643	3300027846	Vadose Zone Soil	KAWTSDEDERLRELVISNASLFDIALELGRTVVAVKARAHAIGIALRRSRFRVKEKAK
Ga0209180_106449401	3300027846	Vadose Zone Soil	MAQLATKKINNAKAWTSDEDKRLRKLIISNAPAFDIAADLGRTVSAVRARAQALRISLGSSRFRMKAKGK
Ga0209488_105643232	3300027903	Vadose Zone Soil	PGNEHDSGETDTKKLNNAKAWTSDEDERLRELVLSNASLSDIAEELGRTASAVRARAHAKRIALGRSRFIVKTEAK
Ga0209488_108379091	3300027903	Vadose Zone Soil	MSRPPEKPKRKNRAWTSGDDERLLQLIISNASVIDIAAELGRTVKAVRARALRLRIALGRSRFRVKPK
Ga0209526_102051892	3300028047	Forest Soil	LSDPWRSTGRTPYPGETDGKKLNNAKAWTSDEDERLRELVISNVSVIDIAADLGRTVKAVRARAHALRIALGRSRFRIKARVK
Ga0209526_105535011	3300028047	Forest Soil	RREPGNEHDPGETDGKKLNNAKAWTTDEDERLREFVISNASVFDIAADLGRTVVAVRARAHALRIALGRARFRVNAKAK
Ga0307290_101418862	3300028791	Soil	MAQLATKKINNAKAWTSDEDERLRKLVISNASAFDIAAGLGRTVSAVRARAQALRISLGSSRFRVKAKGK
Ga0307305_101189501	3300028807	Soil	LLQTGYEVTTAASRSMAQLATKKINNAKAWTSDEEERLRKLIISNAPVFDIAADLGRTVVAVRTRAQVLRISLGRSRFRKKAKGK
Ga0307292_100774661	3300028811	Soil	LATKKINNAKAWTSDEEERLRKLIISNAPVFDIAADLGRTVVAVRTRAQVLRISLGRSRFRKKAKGK
Ga0307302_104924202	3300028814	Soil	LRHSIRDLIRFPNEHDSGENHTKKPSNAKAWTSDENERLRELIISNASIIDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK
Ga0307296_104802841	3300028819	Soil	FGCPLAEHRRFMAQLATKKINNAKAWTSDEDERLRKLIISNAPAFDIAADLGRTVTAVRARAQALRISLGSSRFRVKAKGK
Ga0307310_105105282	3300028824	Soil	MAQLATKKINNAKAWTSDEEERLRKLIISNAPVFDIAADLGRTVVAVRTRAQVLRISLGRSRFRKKAKGK
Ga0307312_100279276	3300028828	Soil	MAQLATKKINNAKAWTSDEDERLRKLVISNASAFDIAAGLGRTVTAVRARAQALRISLGSSRFRVKAKGK
Ga0307312_101772541	3300028828	Soil	MAQLATKKINNAKAWTSDEEERLRKLIISNAPVFDIAADPGRTVVAVRTRAQVLRISLGRSRFRKKAKGK
Ga0307278_102053102	3300028878	Soil	SGENHTKKPSNTKAWTSDEEKRLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVKANPRNDAG
Ga0307277_100426561	3300028881	Soil	DEDEQLRQLVVSNVSLSDIAEDLGRTASAVRARAHAIRIALRRSRFIVKTKAK
Ga0307277_101493921	3300028881	Soil	PRQKRTSPRRREHGNEHDPGETETKKLNNAKAWTSGEDERLRKLIISNASVLDIAADLGRTVKAVRARAHALRIALGRSRFRVKAKAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters