Metagenome Family F077737

Basic Information
Family ID	F077737
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	113 residues
Representative Sequence	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG
Number of Associated Samples	106
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.72 %
% of genes near scaffold ends (potentially truncated)	30.77 %
% of genes from short scaffolds (< 2000 bps)	78.63 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Most Common Taxonomy
Group	Bacteria (93.162 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.256 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.282 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.88% β-sheet: 23.91% Coil/Unstructured: 44.20%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
c.52.1.24: Restriction endonuclease-like	d1w36b3	1w36	0.6
d.128.1.0: Glutamine synthetase/guanido kinase	d2bvca2	2bvc	0.6
c.52.1.24: Restriction endonuclease-like	d1w36b3	1w36	0.6
d.128.1.0: Glutamine synthetase/guanido kinase	d2bvca2	2bvc	0.6
d.128.1.0: Glutamine synthetase/guanido kinase	d4lnoa2	4lno	0.59
d.128.1.0: Glutamine synthetase/guanido kinase	d4lnoa2	4lno	0.59
e.8.1.1: DNA/RNA polymerases	d3ncia2	3nci	0.57
d.280.1.1: Sulfolobus fructose-1,6-bisphosphatase-like	d3t2ca_	3t2c	0.57
e.8.1.1: DNA/RNA polymerases	d3ncia2	3nci	0.57
d.280.1.1: Sulfolobus fructose-1,6-bisphosphatase-like	d3t2ca_	3t2c	0.57

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13360	PQQ_2	7.69
PF13442	Cytochrome_CBB3	5.98
PF08447	PAS_3	5.13
PF14534	DUF4440	3.42
PF00293	NUDIX	2.56
PF13302	Acetyltransf_3	2.56
PF00230	MIP	2.56
PF01011	PQQ	2.56
PF02055	Glyco_hydro_30	1.71
PF13570	PQQ_3	1.71
PF01177	Asp_Glu_race	1.71
PF01471	PG_binding_1	0.85
PF02739	5_3_exonuc_N	0.85
PF08031	BBE	0.85
PF04794	YdjC	0.85
PF00004	AAA	0.85
PF03358	FMN_red	0.85
PF07687	M20_dimer	0.85
PF12681	Glyoxalase_2	0.85
PF13649	Methyltransf_25	0.85
PF00069	Pkinase	0.85
PF02518	HATPase_c	0.85
PF00291	PALP	0.85
PF09924	LPG_synthase_C	0.85
PF13577	SnoaL_4	0.85
PF03992	ABM	0.85
PF05163	DinB	0.85
PF00266	Aminotran_5	0.85
PF03473	MOSC	0.85
PF05173	DapB_C	0.85
PF00174	Oxidored_molyb	0.85
PF07681	DoxX	0.85
PF13689	DUF4154	0.85
PF01596	Methyltransf_3	0.85
PF01979	Amidohydro_1	0.85
PF01564	Spermine_synth	0.85
PF03551	PadR	0.85
PF13432	TPR_16	0.85
PF13564	DoxX_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.42
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	2.56
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	1.71
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.85
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.85
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.85
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.85
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.85
COG3394	Chitooligosaccharide deacetylase ChbG, YdjC/CelG family	Carbohydrate transport and metabolism [G]	0.85
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.85
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	0.85
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.16 %
Unclassified	root	N/A	6.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.16 %
Unclassified	root	N/A	6.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.16 %
Unclassified	root	N/A	6.84 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	47.01 %
Unclassified	root	N/A	6.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	46.15 %
Unclassified	root	N/A	6.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	41.03 %
Unclassified	root	N/A	6.84 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.56 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.03 %
Unclassified	root	N/A	6.84 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.56 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.03 %
Unclassified	root	N/A	6.84 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.56 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.03 %
Unclassified	root	N/A	6.84 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.56 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.03 %
Unclassified	root	N/A	6.84 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.56 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_10387779	All Organisms → cellular organisms → Bacteria	4198	Open in IMG/M
3300000956\|JGI10216J12902_102292871	All Organisms → cellular organisms → Bacteria	6100	Open in IMG/M
3300001686\|C688J18823_10240205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1208	Open in IMG/M
3300004027\|Ga0055459_10173037	Not Available	594	Open in IMG/M
3300004114\|Ga0062593_102003470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	643	Open in IMG/M
3300004156\|Ga0062589_101449886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	672	Open in IMG/M
3300004157\|Ga0062590_101609210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	657	Open in IMG/M
3300004463\|Ga0063356_100233833	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300004463\|Ga0063356_102301286	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300004463\|Ga0063356_103264192	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300004463\|Ga0063356_103891221	Not Available	643	Open in IMG/M
3300004479\|Ga0062595_100544528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	886	Open in IMG/M
3300004480\|Ga0062592_100849317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	816	Open in IMG/M
3300005175\|Ga0066673_10005223	All Organisms → cellular organisms → Bacteria	5176	Open in IMG/M
3300005175\|Ga0066673_10034863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2447	Open in IMG/M
3300005177\|Ga0066690_10178828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1405	Open in IMG/M
3300005179\|Ga0066684_10127098	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300005181\|Ga0066678_10836221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	606	Open in IMG/M
3300005330\|Ga0070690_100611696	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	828	Open in IMG/M
3300005330\|Ga0070690_101048029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	644	Open in IMG/M
3300005331\|Ga0070670_100147079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2039	Open in IMG/M
3300005332\|Ga0066388_100005135	All Organisms → cellular organisms → Bacteria	9055	Open in IMG/M
3300005333\|Ga0070677_10471751	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005335\|Ga0070666_10287409	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300005338\|Ga0068868_100289613	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300005340\|Ga0070689_100402249	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300005343\|Ga0070687_100410617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	890	Open in IMG/M
3300005344\|Ga0070661_100809078	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005354\|Ga0070675_100419508	All Organisms → cellular organisms → Bacteria → FCB group	1196	Open in IMG/M
3300005364\|Ga0070673_100137895	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300005365\|Ga0070688_100611065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	836	Open in IMG/M
3300005367\|Ga0070667_100625654	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	993	Open in IMG/M
3300005434\|Ga0070709_11188896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300005436\|Ga0070713_102287198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300005440\|Ga0070705_101149428	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300005451\|Ga0066681_10092477	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300005459\|Ga0068867_100336257	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300005466\|Ga0070685_10970620	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	636	Open in IMG/M
3300005468\|Ga0070707_100088835	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300005518\|Ga0070699_102005800	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300005536\|Ga0070697_100828977	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005545\|Ga0070695_100944951	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005566\|Ga0066693_10147171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	883	Open in IMG/M
3300005569\|Ga0066705_10602169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300005576\|Ga0066708_10202227	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005578\|Ga0068854_101334348	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005617\|Ga0068859_100212277	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300005764\|Ga0066903_100236460	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300005836\|Ga0074470_11677966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1755	Open in IMG/M
3300005842\|Ga0068858_100258188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1656	Open in IMG/M
3300005876\|Ga0075300_1001916	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300005885\|Ga0075284_1010598	Not Available	1039	Open in IMG/M
3300005897\|Ga0075281_1015767	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300006034\|Ga0066656_10638482	Not Available	687	Open in IMG/M
3300006172\|Ga0075018_10084596	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300006173\|Ga0070716_101506386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300006237\|Ga0097621_100929704	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300009098\|Ga0105245_11961075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	639	Open in IMG/M
3300009148\|Ga0105243_13076296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300009177\|Ga0105248_10061482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4217	Open in IMG/M
3300009177\|Ga0105248_12621451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300009649\|Ga0105855_1075685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	933	Open in IMG/M
3300010045\|Ga0126311_10185073	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300010322\|Ga0134084_10371129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300010362\|Ga0126377_13513144	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300010373\|Ga0134128_11251279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	818	Open in IMG/M
3300010398\|Ga0126383_10128951	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300010401\|Ga0134121_10750770	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300010403\|Ga0134123_10190131	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300011444\|Ga0137463_1007795	All Organisms → cellular organisms → Bacteria	3611	Open in IMG/M
3300012207\|Ga0137381_10165618	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1906	Open in IMG/M
3300012208\|Ga0137376_10112697	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300012208\|Ga0137376_10302143	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300012209\|Ga0137379_10304324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1505	Open in IMG/M
3300012285\|Ga0137370_10517319	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	732	Open in IMG/M
3300012351\|Ga0137386_11254900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	516	Open in IMG/M
3300012360\|Ga0137375_10244618	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300012912\|Ga0157306_10284701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	599	Open in IMG/M
3300012955\|Ga0164298_11273123	Not Available	561	Open in IMG/M
3300012958\|Ga0164299_10222795	Not Available	1107	Open in IMG/M
3300012960\|Ga0164301_10260831	Not Available	1143	Open in IMG/M
3300012960\|Ga0164301_10649091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	786	Open in IMG/M
3300012961\|Ga0164302_11157735	Not Available	615	Open in IMG/M
3300012986\|Ga0164304_10493673	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300012986\|Ga0164304_10680817	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	779	Open in IMG/M
3300013105\|Ga0157369_10572124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1167	Open in IMG/M
3300013297\|Ga0157378_10620380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1094	Open in IMG/M
3300013297\|Ga0157378_10762244	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300014166\|Ga0134079_10338005	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300015356\|Ga0134073_10064449	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1013	Open in IMG/M
3300015371\|Ga0132258_11021909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2089	Open in IMG/M
3300018433\|Ga0066667_12099632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300018482\|Ga0066669_10011469	All Organisms → cellular organisms → Bacteria	4548	Open in IMG/M
3300018482\|Ga0066669_10142964	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300021388\|Ga0213875_10051333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1932	Open in IMG/M
3300025903\|Ga0207680_10288844	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300025906\|Ga0207699_11455708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300025920\|Ga0207649_11697078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300025925\|Ga0207650_10113471	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300025927\|Ga0207687_10011681	All Organisms → cellular organisms → Bacteria	5743	Open in IMG/M
3300025933\|Ga0207706_10365817	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1253	Open in IMG/M
3300025936\|Ga0207670_11479245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
3300025940\|Ga0207691_10178667	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300025941\|Ga0207711_10493421	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300025960\|Ga0207651_10015707	All Organisms → cellular organisms → Bacteria	4410	Open in IMG/M
3300025986\|Ga0207658_10694789	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300025988\|Ga0208141_1003335	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300026023\|Ga0207677_10120875	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300026089\|Ga0207648_10034902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4434	Open in IMG/M
3300026095\|Ga0207676_11784882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300026301\|Ga0209238_1148281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300026550\|Ga0209474_10059676	All Organisms → cellular organisms → Bacteria	2694	Open in IMG/M
3300028881\|Ga0307277_10557500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300031716\|Ga0310813_11094717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	730	Open in IMG/M
3300032163\|Ga0315281_10145811	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300033412\|Ga0310810_10037839	All Organisms → cellular organisms → Bacteria	5892	Open in IMG/M
3300033475\|Ga0310811_10001638	All Organisms → cellular organisms → Bacteria	27912	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.52%
Host-Associated	Host-Associated	32.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.25%
Plants	Host-Associated → Plants	32.48%
Aquatic	Environmental → Aquatic	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.11%
Sediment	Environmental → Aquatic → Sediment	2.56%
Roots	Host-Associated → Plants → Roots	1.71%
Freshwater	Environmental → Aquatic → Freshwater	0.85%
Marine	Environmental → Aquatic → Marine	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.03%
Loam	Environmental → Terrestrial → Soil → Loam	17.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Lake	Environmental → Aquatic → Freshwater → Lake	0.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.42%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.85%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.85%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004027	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025988	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_103877792	3300000891	Soil	MSALHVGIARYSSVATAIARALGVEPAPDCRIGQHRITLTFRRLGAWRWSGDQQIEHALRVAAVARTVLADDPRRAVRKRVNRAIVVIYEDTTLIRGCEVVSRWQCVVPAAS*
JGI10216J12902_1022928713	3300000956	Soil	MPRLQIGVVRYASVAEKIRQVLGIERSPDTVIGQLRITLTFRSLGASRWPEAQQIEHALRVAVIARNVLADETRRALRRRANRAIVVIYEDATDVRGCAVVAQWKCVVPAADERPLT*
C688J18823_102402052	3300001686	Soil	MNVIRIGIVRYASVGTAIGRALGIDPPPDIRIGQGRITLTFRSLGASRWPESKQIEQALHIAVTARAVLAADTRRAVRRRALDRAIVVVFEDATPVKGCSVVGQWKCVVPANSPREV*
Ga0055459_101730372	3300004027	Natural And Restored Wetlands	VTRLKFGVVRYASVATAIRGALGVGPTPDCRIGQGRIRLTFRHLNATRWSENQQMAHALRAAETARSVLRADSRRALRERAAGAIEVAYEDDAIVRGCVVNARWECVVPAAVSLADQIRATIK*
Ga0062593_1020034701	3300004114	Soil	RMSALHVGIARYGSVATAIAQALGVEPAPDCRIGQHRITLTFRRLGAWRWSGEQQIEYALRVAAVVRAVLADDHRRAVRKRVNRAIVVIYEDTSLVRGCEVVSRWECVVPA*
Ga0062589_1014498862	3300004156	Soil	GLRMSALHVGIARYGSVATAIAQALGVEPAPDCRIGQHRITLTFRRLGAWRWSGDQQIEYALRVAAVVRAVLADDHRRAVRKRVNRAIVVIYEDTSLVRGCEVVSRWECVVPA*
Ga0062590_1016092101	3300004157	Soil	MSALHVGIARYGSVATAIAQALGVEPAPDCRIGQHRITLTFRRLGAWRWSGEQQIEYALRVAAVVRAVLADDHRRAVRKRVNRAIVVIYEDTSLVRGCEVVSRWECVVPA*
Ga0063356_1002338331	3300004463	Arabidopsis Thaliana Rhizosphere	MSYLRVGLTRYSSVTTAIARALGVEPAPDCRIGQHRITLTFRRLGAWRWSGEQQIEYAVRVAAVVRAVLADDHRHAVRKRVNRAIVVIYEDTSLVRGCEVVSRWECVIPA*
Ga0063356_1023012861	3300004463	Arabidopsis Thaliana Rhizosphere	SALHVGIARYSSVATAIARALGVEPPPECRIGQHRITLTFRRLGAWRWAGDQQIEHALRVAAVARTILADDPRRAVRKRVNRAIVVIYEDTTLIRGCEVVSRWQCVVPAAS*
Ga0063356_1032641922	3300004463	Arabidopsis Thaliana Rhizosphere	MSALHVGIARYGSVAAAIARALGVEPPPDCRIGQHRITLTFRRLGAWRWSGEQQIEYAVRVAAVARAVLADDHRRAVRKRVNRAIVVIYEDT
Ga0063356_1038912211	3300004463	Arabidopsis Thaliana Rhizosphere	MSALHVGIARYGSVATAIAQALGVEPAPDCRIGQHRITLTFRRLGAWRWSGEQQIEYALRVAAVVRAVLTDDHRRAVRKRVNRAIVVIYEDTSLVR
Ga0062595_1005445282	3300004479	Soil	MARLQAGIVRYRSLANAISQALGIEPAPDCRIGAGRITVTFRRLGGSRWPEEEQIEFALETARIARSVLANDTRRGVSRRANRAIVVVYEDTTLVRGCEVVARWECVVPVQPQLRG*
Ga0062592_1008493172	3300004480	Soil	MSALHVGIARYGSVATAIAQALGVEPAPDCRIGQHRITLTFRRLGAWRWSGEQQIEYALRVAAVVRAVLTDDHRRAVRKRVNRAIVVIYEDTSLVRGCEVVSRWECVVPA*
Ga0066673_100052234	3300005175	Soil	MKRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREVLAADSRRTVRGRARRAIVVVYEDATLLSGCSVIARWECVVPPGAE*
Ga0066673_100348632	3300005175	Soil	MPRLQAGVVRYRSLALAISQALGIEPAPDCRIGGGRITVTFRRLGASRWPEEEQIEFALETATIARTVIANDHRRGVSRRAKRAIVVVYEDTTLVRGCEVVGRWEFVVPAASV*
Ga0066690_101788282	3300005177	Soil	MSRLQVGVVRYASLARAIAQALGIEPAPDCRIGQGRITITFRRVGASRWPEARQIDQALRVAAIARTVIAADPRRAVRQRATRAIVVVYEDATLVRGCAVTSRWECVIPAT*
Ga0066684_101270983	3300005179	Soil	MKRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREVLAADSRRTVRGRARRAIVVVYEDATLLSGCSVITRWECVVPPGAE*
Ga0066678_108362212	3300005181	Soil	MRSLKLGIVRYASVAHAIGQALGIAPAPDVRIGQGRITLLFRQLGASRWPQAQQIEHALRVAAVARRVLAADSRRSIRQRATRAIVVVYEDVTLDHGCAVSARWDCVVPVDADARRD
Ga0070690_1006116961	3300005330	Switchgrass Rhizosphere	SGAAGQFTERHQCQRLAMRRLQAGVVRFASVAAAIQRALGVEPAAYCQIGHGRITLTFRRLGASRWPEDRQIEHALRAAATTRAILAGDPRRSVRERANRAIVVVYEDATLVRGCSVLARWECVVAAPQSPDA*
Ga0070690_1010480292	3300005330	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0070670_1001470793	3300005331	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0066388_1000051356	3300005332	Tropical Forest Soil	MSRIQVGVVRFPAVGAAIARALGGSPEPDCRIGHGRITLTFRRLGATRWPEARQLDHALRAATVTRSILANDARSAVRRRAARAIEIVYEDASLVQGCSVTGRWEYVVPATATR*
Ga0070677_104717513	3300005333	Miscanthus Rhizosphere	YPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0070666_102874092	3300005335	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQARITITFRRLGASRWSECEQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0068868_1002896133	3300005338	Miscanthus Rhizosphere	AAMSRLKGGVVRFASVATDIASALGVDPAPDCHIGQGRITITFRRIGASRWSEREQIERALNVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0070689_1004022492	3300005340	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQARITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0070687_1004106172	3300005343	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0070661_1008090781	3300005344	Corn Rhizosphere	CLELYPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTIRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0070675_1004195082	3300005354	Miscanthus Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQAVRDRVKRAIVVVY
Ga0070673_1001378952	3300005364	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQARITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0070688_1006110652	3300005365	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0070667_1006256543	3300005367	Switchgrass Rhizosphere	SPVIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0070709_111888962	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ARAISEALGIEPPPDFLIGQGRITLTFRRLGASRWPEAQQIEHALQVASVARSVLSSDSRRAVRQRADRAIVVVYEDAKLMKGCAVVSRWECVLPADPAATQDRLGS*
Ga0070713_1022871981	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VEVGTFALQRNFLTAGRGMRRLQIGIVRYLSAARAIGNALGIEPAPYIRIGHRRITLTFRGIGASRWPENQQMELALRAAATARAVLAQNPRRGLRDPTTRAIVVVYEDASVVRGCAVVARWECVVPATSSRGA*
Ga0070705_1011494282	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0066681_100924772	3300005451	Soil	MSRLQVGVVRYASLAGAIAQALGIEPAPECRIGRGRITITFRRVGASRWPEARQIDQALRVAAIARTVIAADPRRAVRQRATRAIVVVYEDATLVRGCAVTGRWECVIPAT*
Ga0068867_1003362572	3300005459	Miscanthus Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQARITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0070685_109706201	3300005466	Switchgrass Rhizosphere	ATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0070707_1000888351	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MARLQAGVVRYRSLALAISQALGIEPAPDCRIGGGRITVTFRRLGGSRWPEEEQIEFALETATIARTVIANDTRRGVSRRANRAIVVVFEDTSLVRSCEVVARWESVVPSGGR*
Ga0070699_1020058001	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLQVGVVRFRSVATAISQALGIEPAPDCRIGGGRITVTFRRLGASRWPEEEQIEFALEAAAIAREAIASDHRRGVRSRASRAIVVAYEDTTLVRGCEVVARWECVVPTPL*
Ga0070697_1008289772	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGRLQVGVIRYASVADAIGRALNVEPAPECRIGQGRITLTFRRIGASRWPEGQQIEHALRVAAVARAVLAGDARKAVRERADRAIVVVYEDAVLVRGCAVTSQWQCVIPAAAT*
Ga0070695_1009449512	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLRGGVIRFAAVANAIADAMGIDPGPDCRIGHGRIMLTFRRLGASRWPDRQQIEFALRSAEVARSILAADSRRILRQRAKRAIVVVYEDATLVSGCSVVARWECVIPAREP*
Ga0066693_101471712	3300005566	Soil	MKRLRVGVTRLASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKRQIEFALRAAGIAREVLAADSRRTVRGRASRAIVVVYEDATLLSGCSVIARWECVVPPGAE*
Ga0066705_106021691	3300005569	Soil	SRLQVGVVRYASLARAIAQALGIEPAPDCRIGQGRITITFRRVGASRWPEARQIDQALRVAAIARTVIAADPRRAVRQRATRAIVVVYEDATLVRGCAVTSRWECVIPAT*
Ga0066708_102022272	3300005576	Soil	MKRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREVLAADSRRTVRGRASRAIVVVYEDATLLSGCSVIARWECVVPPGAE*
Ga0068854_1013343483	3300005578	Corn Rhizosphere	ASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0068859_1002122773	3300005617	Switchgrass Rhizosphere	VIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATAARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0066903_1002364602	3300005764	Tropical Forest Soil	MSRIQVGVVRYAAVGAAIAQALGGNPEPDCRLGHGRTTLTFRRLGATRWPEARQIEHALRAATVARSIFAADSRGAVRRRATRAIEVVYEDSSLVQGCPATGRWEYVVPAPRS*
Ga0074470_116779661	3300005836	Sediment (Intertidal)	TRLSLHSAKNCVDAHHARTMSRLQIGVLRYASVAKAIGQALGAEPAPDCQIGHGRITVTFRRLGASRWPEDQQIEYALRAAAITRKVLDDNSRRAVRERATRAIVVVFEDSTLVRGCATLARWECVVPAAANRNA*
Ga0068858_1002581882	3300005842	Switchgrass Rhizosphere	VIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG*
Ga0075300_10019164	3300005876	Rice Paddy Soil	MRRLQVGVIRYASVGTAIGRALGLEPIPDCRIGQGRITITFRRLGATRWTEARQIEYALRAAAVARETLAGDRRPAVHRRATRAIVVVYEDASLVRGCA
Ga0075284_10105982	3300005885	Rice Paddy Soil	MRRLQVGVIRYASVGTAIGRALGLEPIPDCRIGQGRITITFRRLGATRWTEARQIEYALRAAAVARETLAGDRRPAVHRRATRAIVVVYEDASLVRGCAVEGRWECVVPAPTSDGA*
Ga0075281_10157673	3300005897	Rice Paddy Soil	MRRLQVGVIRYASVGTAIGRALGLEPIPDCRIGQGRITITFRRLGATRWTEARQIEYALRAAAVARETLAGDRRPAVHRRATRAIVVVYEDASLVRGCAVEGRWECVVPAPTSD
Ga0066656_106384822	3300006034	Soil	MARLQIGIVRYASVARRIAQALGDQPAPECRIGQGRITITFRRIGASRWAESRQIEHALRVATITRGAMATDSRRAVRQRMTRAIVVVYEDAALVRGCAVTARWECVIPAAAEGA*
Ga0075018_100845962	3300006172	Watersheds	VSRLQVGIVRYLSVAKAIGKALGIEPAPHIRIGEGRITITFRSLGASRWPENQQVELALRAAETARAVLAQGSKRALRRRAARAIVVVYEDSTLVRGCAVVGRWECVVPVPALHGA*
Ga0070716_1015063861	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RLKVGIVRYGSVARAISEALGIEPPPDFLIGQGRITLTFRRLGASRWPEAQQIEHALQVASVARSVLSSDSRRAVRQRADRAIVVVYEDAKLMKGCAVVSRWECVLPADPAATQDRLGS*
Ga0097621_1009297042	3300006237	Miscanthus Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLA
Ga0105245_119610751	3300009098	Miscanthus Rhizosphere	MARLQAGIVRYRSLANAISQALGIEPAPDCRIGAGRITVTFRRLGGSRWPEEEQIEFALETARIARNVLANDTRRGVSRRANRAIVVVYEDTTLVRGCEVVARWECVVPVQPQLRG*
Ga0105243_130762962	3300009148	Miscanthus Rhizosphere	MSRLQIGVIRYASVATAISQALGVERVPECRIGHGRITLTFRRLGASRWPEAEQIEHALRVAAIARAVLASDSRRAVRQRGSRAIEVIYEDATLVRGCAIEAQ
Ga0105248_100614823	3300009177	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQARITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0105248_126214511	3300009177	Switchgrass Rhizosphere	MRRLQAGVVRFASVAAAIQRALGVDPPPYCQIGHGRITLTFRRLGASRWPEDRQIEHALHAAETTRAILAGDPRRSVRERATRAIVVVYEDATLVRGCSVVARWEC
Ga0105855_10756851	3300009649	Permafrost Soil	MSPLQGGIVRYASVATAIAHAVGEPAPDCRIGQGRITLTFRRLGATRWAEAEQIEHALRVAAAARVVLADDRRRAVRHRAARAIVVVYEDVALVRGCAVTARWECVVPAE*
Ga0126311_101850733	3300010045	Serpentine Soil	MSALHVGIARYGSVATAIARALGVEPAPDCRIGQHRITLTFRRLGAWRWSGEQQIEYALRVAAVARAVLADDHRRAVRKRVNRAIVVIYEETSLVRGCEVVSRWECVIPA*
Ga0134084_103711291	3300010322	Grasslands Soil	MKRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREVLAADSRRTVRGRARRAIVVVYEDATFLSGCSVIARWESVVPSGAE*
Ga0126377_135131441	3300010362	Tropical Forest Soil	MSRIQVGVVRYPAVGAAIARALGGSPEPDCRIGHGRITLTFRRLGATRWPEARQLDHALRAATVTRSILANDARSAVRRRAARAIEIVYEDASLVQGCSVTGRWEYVVPATATR*
Ga0134128_112512792	3300010373	Terrestrial Soil	MSRLQIGIVRYLSVAKAIGKALGIEPAPHIRIGQGRITITFRSLGASRWPENQQIELALRAAETACAVLAQGSKRALRRRAARAIVVVYEDSTLVRGCAVVGRWECVVPVPALHGA*
Ga0126383_101289513	3300010398	Tropical Forest Soil	MSTAMSRIQVGVVRYAAVGAAIARALGGGLEPDCRIGHGRTTLTFRRLGATRWPEARQIDHALRAAAVARDIFAADPRSAVRRRATRAIEVVYEDASLAQGCAATGRWEYVVPAPRNEP*
Ga0134121_107507701	3300010401	Terrestrial Soil	LYPAMSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0134123_101901312	3300010403	Terrestrial Soil	VPRLKVGIVRYGSVARAISEALGIEPPPDFLIGQGRITLTFRRLGASRWPEAQQIEHALQVASVARSVLSSDSRRAVRQRADRAIVVVYEDAKLVKGCAVVSRWECVLPADPAATQDRLGS*
Ga0137463_10077954	3300011444	Soil	MSRLQVGVVRYLSAATAIGKALGVEPAPYCRIGHGRITLTFRQLGASRWSENQQIEYALRAAAAARAVLGDDPRRTVRERTNRAIVVVYEDATLIRGCAVVGRWECVIPAPSPRDV*
Ga0137381_101656183	3300012207	Vadose Zone Soil	MSRLKVGIVRYASVAKAIGRALGIEPVPDCRIGQGRITLTVRSLGASRWSEAQQIEHSLKIAAVARTVLAEDSRRAVRKRAVNRAIVIIYEDATLVKGCAVVTRWECVVPANPSREM*
Ga0137376_101126973	3300012208	Vadose Zone Soil	MRRLRVGIVRFASVAAAIARALDVEPPPDCRIGHGRITLTFRRLGASRWSEAKQIDYALRVAAVTRSVLAADPRRLVRQRAANRAIVVVYEDSALVKGCAVVAQWKCVVPAG*
Ga0137376_103021433	3300012208	Vadose Zone Soil	MRRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREALAADSRRTVRGRARRAIVVVYEDATLLSGCSVIARWECVVPSGAE*
Ga0137379_103043242	3300012209	Vadose Zone Soil	MSRLKVGIVRYASVAKAIGRALGIEPVPDCRIGQGRITLTVRSLGASRWSEAQQIEHSLKIAAVARTVLAEDSRSAVRKRAVNRAIVIIYEDATLVKGCAVVTRWECVVPANPSREV*
Ga0137370_105173192	3300012285	Vadose Zone Soil	VANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREALAADSRRTVRGRARRAIVVVYEDATLLSGCSVIARWECVVPSGAE*
Ga0137386_112549001	3300012351	Vadose Zone Soil	MSRLQVGIVRYASVAKAIGRALGIEPVPDCRIGQGRITLTVRSLGASRWSEAQQIEHSLKIAAVARTVLAEDSRRAVRKRAVNRAIVIIYEDATLAKGCAVVTRRECVVPANPSREV*
Ga0137375_102446183	3300012360	Vadose Zone Soil	MSRLKFGVTRYRSAAAAIGSALGVEPAPECRIGRGRITLTFRRVGATRWSEDERIENAHRAAAIARMVLAEDTRRAVRKRATRAVVVVYEDATLVRGCEITARWECVVTDAGLRDAY*
Ga0157306_102847012	3300012912	Soil	MSALHVGIARYGSVATAIAQALGVEPAPDCRIGQHRITLTFRRLGAWRWSGDQQIEYALRVAAVVRAVLADDHRRAVRKRVNRAIVVIYEDTSLVRGCEVVSRWESVVPA*
Ga0164298_112731232	3300012955	Soil	MSRLRIGIVRYSSVADAIGRALGIDPPPDIRIGQGRITLTLRSLGATRWSEAKQIDEALKIALTARAVLAADTRRSVKKRALDRAIVVVFEDATLIKGCSVIAEWKCVVPADSPQA*
Ga0164299_102227952	3300012958	Soil	MSRLRGGVVRFASVATDIASALGVDPAPDCHSGRGRITITFRRIGASRWSEREQIEHALHVATVARRVLANDSRPKVRDRITRAIVVVYEDAALVRGCDVLAKWECVVPA*
Ga0164301_102608313	3300012960	Soil	MSRLRIGIVRYSSVADAIGRALGIDPPPDIRIGQGRITLTLRSLGATRWSEAKQIDEALKIAVTARAVLAADTRRSVKKRALDRAIVVVFEDATLIKGCSVIAVWKCVVPADSPQA*
Ga0164301_106490912	3300012960	Soil	MTRIGVVRYHSIASAVSQALGIQPAPDCRIGHGRITLTFRRIGASRWTEAQQIEHALRAAEVTRAVLASDSRRAVRERSTRAIVVVYEDATLVRGCAVVARWECVVPAPAHG*
Ga0164302_111577351	3300012961	Soil	MSRLRIGIVRYSSVADAIGRALGIDPPPDIRIGQGRITLTLRSLGATRWSEAKQIDEALKIALTARAVLAADTRRSVKKRALDRAIVVVFEDATLIKGCSVIAEWKCVVPADSPPA*
Ga0164304_104936732	3300012986	Soil	MSRLRIGIVRYSSVADAIGRALGIDPPPDIRIGQGRITLTLRSLGATRWSEAKQIDEALKIAVTARAVLAADTRRSVKKRALDRAIVVVFEDATLIKGCSVIAEWKCVVPADSPQA*
Ga0164304_106808172	3300012986	Soil	MSRLRVGVVRYGAMAAAIAQALHIEPAPDCRIGHGRITLTFRRMGASRWPEEQQIEQALRVAQIARDMLASDSRRAVRERATRAIVVVYEDATLVRGCAVVARWECVVPAPAHG*
Ga0157369_105721242	3300013105	Corn Rhizosphere	MARLQAGIVRYRSLANAISQALGIEPAPDCRIGAGRITVTFRRLGGSRWPEEEQIEFALETARIARSVLANDTRRGVSRRANRAIVVAYEDTTLVRGCEVVARWECVVPVQPQLRG*
Ga0157378_106203802	3300013297	Miscanthus Rhizosphere	MSRLKAGVVRYASVATEIASALGFEPAPECRIGHGRVTITFRHLGASRWSESEQIEHALHVAAVVRTVLANDSRRSVRDRVARAVVVVYQDAALVRGCDVSARWECVVPA*
Ga0157378_107622443	3300013297	Miscanthus Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG*
Ga0134079_103380052	3300014166	Grasslands Soil	MKRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREVLAADSRRTVRGRASRAIVVVYEDATLLSGCSVIARWECVVPSGTE*
Ga0134073_100644492	3300015356	Grasslands Soil	WDSAMKRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREVLAADSRRTVRGRASRAIVVVYEDATLLSGCSVIARWECVVPPGAE*
Ga0132258_110219093	3300015371	Arabidopsis Rhizosphere	MRRLQVGVVRFASVATAIQRALGVEPAPYCQIGHGRITVTFRRLGASRWPENRQIEHALNAAETTRAVLAGDARRSVRERANRAIVIVYEDAILVRGCSVLARWECVVPAPAAKP*
Ga0066667_120996322	3300018433	Grasslands Soil	MNVIRIGIVRYASVGAAIGRALGVDPPPDIRIGQGRVTLTFRSLGASRWPESKQIEHALRIAVTARAVLAADSRRAVRRRALDRAIVVVFEDATLVKGCSVVGQWKCVVPADSPREV
Ga0066669_100114691	3300018482	Grasslands Soil	MKRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREVLAADSRRTVRGRARRAIVVVYEDATLLSGCSVIARWECVVPSGTE
Ga0066669_101429643	3300018482	Grasslands Soil	MSRLQVGVVRYASLAGAIAQALGIEPAPECRIGRGRITITFRRVGASRWPEARQIDQALRVAAIARTVIAADPRRAVRQRATRAIVVVYEDATLVRGCAVTGRWECVIPAT
Ga0213875_100513332	3300021388	Plant Roots	MSRLQFGIVRYASIGTAIARALGAGPVPDYREIQGRQTLTFRQLGATRWPEAQQAEHAHRIAALARDVLAADKRREIRQRTSRAIVIVYEDVGLVRGCAVTARWECVIPGTA
Ga0207680_102888443	3300025903	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQARITITFRRLGASRWSECEQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG
Ga0207699_114557082	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ARAISEALGIEPPPDFLIGQGRITLTFRRLGASRWPEAQQIEHALQVASVARSVLSSDSRRAVRQRADRAIVVVYEDAKLMKGCAVVSRWECVLPADPAATQDRLGS
Ga0207649_116970781	3300025920	Corn Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTIRDRVKRAIVVVYEDAALVR
Ga0207650_101134712	3300025925	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG
Ga0207687_100116816	3300025927	Miscanthus Rhizosphere	MRRLQIGIVRYLSVARAIGNALGIEPAPYIRIGHRRITLTFRSIGASRWPENQQMELALRAAGTARAVLAQNPRRGLRDPTTRAIVVVYEDSSVVRGCAVVARWECVVPAPSSRGA
Ga0207706_103658171	3300025933	Corn Rhizosphere	VIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG
Ga0207670_114792451	3300025936	Switchgrass Rhizosphere	PVEGSWERSPVIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG
Ga0207691_101786672	3300025940	Miscanthus Rhizosphere	VIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQAVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG
Ga0207711_104934213	3300025941	Switchgrass Rhizosphere	EGSWERSPVIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQARITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG
Ga0207651_100157073	3300025960	Switchgrass Rhizosphere	VIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVSALGVEPAPDCRIGQGRITITFRRLGASRWSEREQVEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG
Ga0207658_106947892	3300025986	Switchgrass Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAV
Ga0208141_10033353	3300025988	Rice Paddy Soil	MRRLQVGVIRYASVGTAIGRALGLEPIPDCRIGQGRITITFRRLGATRWTEARQIEYALRAAAVARETLAGDRRPAVHRRATRAIVVVYEDASLVRGCAVEGRWECVVPAPTSDGA
Ga0207677_101208752	3300026023	Miscanthus Rhizosphere	MSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG
Ga0207648_100349023	3300026089	Miscanthus Rhizosphere	VIHTSRTPCLELYPAMSRLKAGVVRYASIATDIVAALGVEPAPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAAVVRGCDVLARWECVVPG
Ga0207676_117848821	3300026095	Switchgrass Rhizosphere	KAGVVRYASIATNIVSALGVEPPPDCRIGQGRITITFRRLGASRWSEREQIEHALHVATVARTVLANDSRQTVRDRVKRAIVVVYEDAALVRGCDVLARWECVVPG
Ga0209238_11482811	3300026301	Grasslands Soil	MSRLQVGVVRYASLARAIAQALGIEPAPDCRIGQGRITITFRRVGASRWPEARQIDQALRVAAIARTVIAADPRRAVRQRATRAIVVVYEDAHSCAVVR
Ga0209474_100596762	3300026550	Soil	MKRLRVGVTRFASVANAIADALGIEPQPDCRIGHGRIMLTFRRLGASRWPEKQQIEFALRAAGIAREVLAADSRRTVRGRARRAIVVVYEDATLLSGCSVIARWECVVPPGAE
Ga0307277_105575001	3300028881	Soil	MTRLRVGIVRYASVAAAIARALAVEPPPDCRIGQGRITLTFRRLGASRWPETKQIDYALRVAAVARSVLAADPRRLVRQRAANRAIVVVYEDSTLVKGCAVVAQWKCVVPAD
Ga0310813_110947171	3300031716	Soil	LEVGIVTLLCDFPTPGRAMKRLQIGIVRYLSAARAIGNALGIEPAPYIRIGHRRITLTFRGIGASGWPENQQMELALRAAGTARAVLAQNPRRGLRDPTTRAIVVVYEDASVVRGCAVVARWECVVPATSSRGA
Ga0315281_101458112	3300032163	Sediment	MSRLQVGVVRYASVAAEIGRALGVESAPDCRIGQGRITLTFRSRGASRWPEAQQVEHALRVAAVARTVFAADPRRAVRQRASRAIVVVYEDATLIRGCEVLARWECVVPAAA
Ga0310810_100378395	3300033412	Soil	MKRLQIGIVRYLSAARAIGNALGIEPAPYIRIGHRRITLTFRGIGASGWPENQQMELALRAAGTARAVLAQNPRRGLRDLTTRAIVVVYEDASVVRGCAVVARWECVVPATSSRGA
Ga0310811_1000163816	3300033475	Soil	MKRLQIGIVRYLSAARAIGNALGIEPAPYIRIGHRRITLTFRGIGASGWPENQQMELALRAAGTARAVLAQNPRRGLRDPTTRAIVVVYEDASVVRGCAVVARWECVVPATSSRGA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077737

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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