Metagenome Family F077723

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077723
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	57 residues
Representative Sequence	LAKDPAARYATAEALAEELYPLARRKTTPVPVPQSNGNGLRDRAARLLRSA
Number of Associated Samples	95
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.29 %
% of genes from short scaffolds (< 2000 bps)	82.91 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.291 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (42.735 % of family members)
Environment Ontology (ENVO)	Unclassified (41.026 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.282 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.51% β-sheet: 0.00% Coil/Unstructured: 59.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00069	Pkinase	82.91
PF12704	MacB_PCD	6.84
PF02687	FtsX	5.98
PF02311	AraC_binding	0.85
PF13472	Lipase_GDSL_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	331.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.71 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.71 %
Unclassified	root	N/A	1.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.71 %
Unclassified	root	N/A	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.71 %
Unclassified	root	N/A	1.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.71 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.71 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.71 %
Chondromyces	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.71 %
Chondromyces apiculatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001162\|JGI12714J13572_1000857	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300001167\|JGI12673J13574_1002872	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300001593\|JGI12635J15846_10581252	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300002245\|JGIcombinedJ26739_100090916	All Organisms → cellular organisms → Bacteria	2849	Open in IMG/M
3300002562\|JGI25382J37095_10064626	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300002562\|JGI25382J37095_10215458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	579	Open in IMG/M
3300002909\|JGI25388J43891_1054349	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300002912\|JGI25386J43895_10162624	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300002917\|JGI25616J43925_10380774	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300005172\|Ga0066683_10520537	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300005174\|Ga0066680_10157341	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300005175\|Ga0066673_10300683	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005177\|Ga0066690_10559034	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300005177\|Ga0066690_10925129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus	554	Open in IMG/M
3300005184\|Ga0066671_10900990	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005451\|Ga0066681_10012057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4233	Open in IMG/M
3300005554\|Ga0066661_10141699	All Organisms → cellular organisms → Bacteria → Proteobacteria	1466	Open in IMG/M
3300005555\|Ga0066692_10825329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300005557\|Ga0066704_10439204	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300005568\|Ga0066703_10459150	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300005598\|Ga0066706_10825029	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005921\|Ga0070766_10142664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1459	Open in IMG/M
3300006172\|Ga0075018_10315463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	775	Open in IMG/M
3300006755\|Ga0079222_10165806	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300006797\|Ga0066659_10092258	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300006806\|Ga0079220_10397800	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300007255\|Ga0099791_10585437	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300007258\|Ga0099793_10086134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1440	Open in IMG/M
3300009012\|Ga0066710_100369132	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300009038\|Ga0099829_10135976	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300009038\|Ga0099829_11528436	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300009088\|Ga0099830_10023409	All Organisms → cellular organisms → Bacteria	4062	Open in IMG/M
3300009088\|Ga0099830_10082531	All Organisms → cellular organisms → Bacteria	2360	Open in IMG/M
3300009088\|Ga0099830_10227545	All Organisms → cellular organisms → Bacteria → Acidobacteria	1469	Open in IMG/M
3300009089\|Ga0099828_10028711	All Organisms → cellular organisms → Bacteria	4455	Open in IMG/M
3300009090\|Ga0099827_11397110	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300009137\|Ga0066709_100001926	All Organisms → cellular organisms → Bacteria	14488	Open in IMG/M
3300009143\|Ga0099792_10673503	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300009143\|Ga0099792_10844212	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300010337\|Ga0134062_10000376	All Organisms → cellular organisms → Bacteria	13418	Open in IMG/M
3300011269\|Ga0137392_11388001	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300011270\|Ga0137391_11421320	Not Available	539	Open in IMG/M
3300011271\|Ga0137393_10558143	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300012096\|Ga0137389_10069317	All Organisms → cellular organisms → Bacteria	2722	Open in IMG/M
3300012096\|Ga0137389_10450969	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300012096\|Ga0137389_11142063	Not Available	667	Open in IMG/M
3300012096\|Ga0137389_11378726	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300012189\|Ga0137388_10209040	All Organisms → cellular organisms → Bacteria → Acidobacteria	1762	Open in IMG/M
3300012189\|Ga0137388_10693181	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300012189\|Ga0137388_11217296	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300012202\|Ga0137363_10364878	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300012203\|Ga0137399_10901893	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300012205\|Ga0137362_10553846	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300012205\|Ga0137362_10679687	All Organisms → cellular organisms → Bacteria → Acidobacteria	885	Open in IMG/M
3300012207\|Ga0137381_11278916	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300012361\|Ga0137360_10024476	All Organisms → cellular organisms → Bacteria	4091	Open in IMG/M
3300012361\|Ga0137360_10924433	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300012361\|Ga0137360_10941815	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300012362\|Ga0137361_11222529	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300012363\|Ga0137390_10267017	All Organisms → cellular organisms → Bacteria → Acidobacteria	1696	Open in IMG/M
3300012363\|Ga0137390_11873491	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300012582\|Ga0137358_10143963	All Organisms → cellular organisms → Bacteria → Acidobacteria	1622	Open in IMG/M
3300012582\|Ga0137358_10370997	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300012683\|Ga0137398_10267993	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300012918\|Ga0137396_10038380	All Organisms → cellular organisms → Bacteria	3220	Open in IMG/M
3300012922\|Ga0137394_10521683	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300012924\|Ga0137413_11635053	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300012927\|Ga0137416_10096648	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300012927\|Ga0137416_10911098	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300012927\|Ga0137416_11100282	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300012929\|Ga0137404_10168674	All Organisms → cellular organisms → Bacteria → Acidobacteria	1834	Open in IMG/M
3300012930\|Ga0137407_10656677	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300014154\|Ga0134075_10232738	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300014166\|Ga0134079_10005576	All Organisms → cellular organisms → Bacteria	3637	Open in IMG/M
3300015051\|Ga0137414_1228329	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300015356\|Ga0134073_10039232	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300017822\|Ga0187802_10221761	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300017961\|Ga0187778_10062003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2288	Open in IMG/M
3300017961\|Ga0187778_10766812	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300017973\|Ga0187780_10478946	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300017994\|Ga0187822_10339003	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300018086\|Ga0187769_10066569	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300018468\|Ga0066662_10121564	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300018482\|Ga0066669_11335366	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300019789\|Ga0137408_1418757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1625	Open in IMG/M
3300020170\|Ga0179594_10120391	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300020579\|Ga0210407_10451647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300020581\|Ga0210399_10410328	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300021088\|Ga0210404_10397206	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300021088\|Ga0210404_10414637	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300021170\|Ga0210400_10541510	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300021432\|Ga0210384_11558846	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300021559\|Ga0210409_10032291	All Organisms → cellular organisms → Bacteria	5027	Open in IMG/M
3300024271\|Ga0224564_1118458	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300026297\|Ga0209237_1020542	All Organisms → cellular organisms → Bacteria	3770	Open in IMG/M
3300026312\|Ga0209153_1268480	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300026317\|Ga0209154_1008988	All Organisms → cellular organisms → Bacteria	4945	Open in IMG/M
3300026328\|Ga0209802_1238225	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300026333\|Ga0209158_1121565	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300026334\|Ga0209377_1108190	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300026343\|Ga0209159_1097155	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300026356\|Ga0257150_1076170	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300026361\|Ga0257176_1071160	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300026482\|Ga0257172_1093202	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300026496\|Ga0257157_1100843	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300026529\|Ga0209806_1056887	All Organisms → cellular organisms → Bacteria → Acidobacteria	1812	Open in IMG/M
3300026529\|Ga0209806_1332894	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300026551\|Ga0209648_10280947	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300026555\|Ga0179593_1024721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1989	Open in IMG/M
3300027787\|Ga0209074_10057052	All Organisms → cellular organisms → Bacteria → Acidobacteria	1212	Open in IMG/M
3300027846\|Ga0209180_10384349	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300027862\|Ga0209701_10376685	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300027875\|Ga0209283_10041406	All Organisms → cellular organisms → Bacteria → Acidobacteria	2905	Open in IMG/M
3300031823\|Ga0307478_11281943	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300032174\|Ga0307470_11019879	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300032180\|Ga0307471_103292120	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300032180\|Ga0307471_103642788	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.44%
Aquatic	Environmental → Aquatic	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.44%
Freshwater	Environmental → Aquatic → Freshwater	1.71%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.89%
Loam	Environmental → Terrestrial → Soil → Loam	5.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	42.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001162	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2	Environmental	Open in IMG/M
3300001167	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12714J13572_10008571	3300001162	Forest Soil	RCLAKDPSARYATTEGLAEALYPLARRKVTPQAPPQTNGNGLRDRAARLLRSA*
JGI12673J13574_10028721	3300001167	Forest Soil	GVVARCLAKDPSARYATTEAVAEALYPLARRKVTPQAPPQTNGNGLRDRAARLLRSA*
JGI12635J15846_105812522	3300001593	Forest Soil	FDQVISRCLAKDPAARYATTEALAEELYPLARRKLMAQPVVPQGNGLRDRAARLLRSA*
JGIcombinedJ26739_1000909161	3300002245	Forest Soil	GVVARCLAKDPSARYATTEGLAEALYPLARRKVTPQAPPQTNGNGLRDRAARLLRSA*
JGI25382J37095_100646262	3300002562	Grasslands Soil	SVPAIFDDLVARCLAKDPAARYQAADAIAEELYPLARRKPATPVPVPQTNGNGFRDRAARLLRSA*
JGI25382J37095_102154582	3300002562	Grasslands Soil	PASFDDLVARCLAKDPAARYAAADALAQELYPLARRAPLPAPMPQSNANGNGLRDRASRLLRSA*
JGI25388J43891_10543492	3300002909	Grasslands Soil	LAKDPAARYAPAEALAEELYPLARRKETPVPVTQSNGNGHGLRDRAARLLRSA*
JGI25386J43895_101626242	3300002912	Grasslands Soil	ASFDDLVARCLAKDPAARYAAADALAQELYPLARRAPLPAPMPQSNANGNGLRDRASRLLRSA*
JGI25616J43925_103807742	3300002917	Grasslands Soil	KDPAARYQTADAIAQELYPLARRKPATPVPVPQTNGNGGLRDRAARLLRSA*
Ga0066683_105205372	3300005172	Soil	CLAKDPAARYATAEALANELYPLARWKTIPSPVPRPTNGNGQRDRAARLLRSA*
Ga0066680_101573411	3300005174	Soil	PSVPAIFDDLVARCLAKDPAARYQAADAIAEELYPLARRKPATPVPVPQTNGNGFRDRAARLLRSA*
Ga0066673_103006831	3300005175	Soil	EVVSRCLAKDPSARYATGEALAQDLYPLARRKVIPQAAPQTTGNGLRDRAARLLRSA*
Ga0066690_105590341	3300005177	Soil	ARYAPAEALAEELYPLARRKETPVPVTQTNGNGHGLRDRAARLLRSA*
Ga0066690_109251292	3300005177	Soil	SVPSNFDGIVARCLAKDPAARYAPAEALAEELYPLARRKETPVPVTQSNGNGHGLRDRAARLLRSA*
Ga0066671_109009901	3300005184	Soil	LPAAFDEVVSRCLAKDPSARYATGEALAQDLYPLARRKVIPQAAPQTTGNGLRDRAARLLRSA*
Ga0066681_100120575	3300005451	Soil	FDEVVSRCLAKDPAARYATAEALAQDLYPLARRKVIPQAAPQTNGNGLRDRAARLLRSA*
Ga0066661_101416992	3300005554	Soil	PSNFDGIVARCLAKDPAARYAPAEALAEELYPLARRKETPIPVAQSNGNGHGLRDRAARLLRSA*
Ga0066692_108253292	3300005555	Soil	ANPSVPSNFDGIVARCLAKDPAARYAPAEALAEELYPLARRKETPVPVTQTNGNGHGLRDRAARLLRSA*
Ga0066704_104392041	3300005557	Soil	LTKDPVARYGVGETLAEDLYPFARRKTVPQASPQSSSNGNGLRTRAARLLRSA*
Ga0066703_104591502	3300005568	Soil	DPIARYAVAETLAEDLYPFARRKTVHQVSPQAVSNGNGLRDRAARLLRSA*
Ga0066706_108250292	3300005598	Soil	RCLAKDPSARYPMTEALAEALYPLARRKVTTPQAPPQTNGNGLRDRAARLLRSA*
Ga0070766_101426642	3300005921	Soil	DGVIVRCLAKDPAARYATAEILAEELYPLARRKTVTEVQPQTNGNSLRDRAGRLLRSA*
Ga0075018_103154631	3300006172	Watersheds	CLAKDPAARYQTTEALAEELYPLARRKTTTSVPVPQTNGSGLRDRAARLLRSA*
Ga0079222_101658061	3300006755	Agricultural Soil	ATFDDVVARCLAKDPKIRYATAEALAEELYPLARRKPAPVTVPQTGGNGLRDRAARLLRSA*
Ga0066659_100922581	3300006797	Soil	RRRLRNDFAARQRIEILREGFDGVVVRCLAKDPSARYATAEALAQDLYPLARRKIIPQAPPQTNGNGLRDRAARLLRSA*
Ga0079220_103978002	3300006806	Agricultural Soil	RCLAKDPKVRYATAEALAEELYPLARRKPAPVTVPQTGGNGLRDRAARLLRSA*
Ga0099791_105854371	3300007255	Vadose Zone Soil	IARYAVAETLAEDLYPFARRKTVHQVSPQAVSNGNGLRDRAARLLRSA*
Ga0099793_100861342	3300007258	Vadose Zone Soil	GVVARCLAKEPSARYATAEALAEDLYPLARHKVIPQAPPQSNGNGLRDRAARLLRSA*
Ga0066710_1003691323	3300009012	Grasslands Soil	FDELIARCLAKDPAARYATAEALANELYPLARWKTIPSPVPRPTNGNGQRDRAARLPRSA
Ga0099829_101359763	3300009038	Vadose Zone Soil	AGFDELIARCLAKDPAARYATAEALANELYPLARWKTIPSPIPRPTNGNGQRDRAARLLRSA*
Ga0099829_115284361	3300009038	Vadose Zone Soil	PAARYATAEALANELYPLARWKTIPSPVPRPTNGNGQRDRAARLLRSA*
Ga0099830_100234094	3300009088	Vadose Zone Soil	GFDGVVARCLAKDPSTRYATAGALAEDLYPLARHKVIPQAPPQTNGNGLRDRAARLLRSA
Ga0099830_100825311	3300009088	Vadose Zone Soil	ARYATAEALAEELYPLARRKTTPVPVPQSNGNGLRDRAARLLRSA*
Ga0099830_102275451	3300009088	Vadose Zone Soil	FDDLVARCLAKDPAARYQTADALAEELYPLARRKPATPVPLPQTNGSGLRDRAARLLRSA
Ga0099828_100287111	3300009089	Vadose Zone Soil	ARYQTADALAEELYPLARRKPATPVPVPQTNGNNGFRDRASRLLRSA*
Ga0099827_113971101	3300009090	Vadose Zone Soil	AKDPAGRYAPAEALAEELFPLARRRATPEPVPQTNGNGLRDRAARFLRST*
Ga0066709_10000192614	3300009137	Grasslands Soil	DPSARYATAEALAQDLYPLARRKVIPQAPPQTNGNGLRDRAARLLRSA*
Ga0099792_106735031	3300009143	Vadose Zone Soil	SARYATAEALAGDLYPLARAKVISQAPPQTNGNGLRDRASRLLRSA*
Ga0099792_108442121	3300009143	Vadose Zone Soil	KDPIARYAVAETLAEDLYPFARRKTVHQVSPQAVSNGNGLRDRAARLLRSA*
Ga0134062_100003761	3300010337	Grasslands Soil	KDPAARYAPAEALAEELYPLARRKETPVPVTQSNGNGHGLRDRAARLLRSA*
Ga0137392_113880012	3300011269	Vadose Zone Soil	DPAARYQTADSIAQELYPLARHKPVTSVPAPQTNGNGGLRDRAARLLRSA*
Ga0137391_114213201	3300011270	Vadose Zone Soil	RCLTKDPVARYGVGETLAEDLYPFARRKIVPQASPQSVGNGNGLRNRAARLLRSA*
Ga0137393_105581432	3300011271	Vadose Zone Soil	LQPSHANGSVPTAFDEVIARCLAKDPAMRYSGADALAGELYPLARRKLTAQIPTLANGSGLRDRAGRLLRSA*
Ga0137389_100693171	3300012096	Vadose Zone Soil	DPAARYQTADSIAQELYPLARHKPVTSVPAPQTNGNGLRDRAARLLRSA*
Ga0137389_104509692	3300012096	Vadose Zone Soil	LTKDPIARYAVAETLAEDLYPFARRKTVHQVSPQTVGNGNGLRDRAARLLRSA*
Ga0137389_111420631	3300012096	Vadose Zone Soil	ARYGVGETLAEDLYPFARRKIVPQASPQSVGNGNGLRNRASRRLRSA*
Ga0137389_113787262	3300012096	Vadose Zone Soil	LAKDPAARYATAEALAEELYPLARRKTTPVPVPQSNGNGLRDRAARLLRSA*
Ga0137388_102090403	3300012189	Vadose Zone Soil	RCLAKDPAARYAAAEALAEELYPLARRIVIPQAPPQTNGNGVRNRATRLLRSA*
Ga0137388_106931812	3300012189	Vadose Zone Soil	LAKDPAARYAAAEALAEELYPLARRIVIPQAPPQANGNGLRNRATRLLRSA*
Ga0137388_112172961	3300012189	Vadose Zone Soil	KDPAARYQTADSIAQELYPLARHKPVTSVPAPQTNGNGLRDRAARLLRSA*
Ga0137363_103648781	3300012202	Vadose Zone Soil	IARYAVAETLAEDLYPFAGRKTVNQVSPQTVSNGNGLRDRAARLLRSA*
Ga0137399_109018931	3300012203	Vadose Zone Soil	PSLPAGFDGVVARCLAKDPSARYATTEALAEALYPLARRTVIPQAPPQTNGNGLRDRAARLLRSA*
Ga0137362_105538462	3300012205	Vadose Zone Soil	AARYQTADSIAQELYPLARHKPVTSVPAPQSNGNGLRDRAARLLRSA*
Ga0137362_106796872	3300012205	Vadose Zone Soil	PSHANPSVPSNFDGIVARCLAKDPAARYAPAEALAEELFPLARRKETPVPMLSTNSNGLRDRAARLLRSA*
Ga0137381_112789161	3300012207	Vadose Zone Soil	FDELIARCLAKDPAARYATAEALANELYPLARWKTIPSPVPRPTNGNGQRDRAARLLRSA
Ga0137360_100244764	3300012361	Vadose Zone Soil	QSARYATAEALAQDLYPLARRKVIPQAVPQTTGNGLRDRAARLLRSA*
Ga0137360_109244331	3300012361	Vadose Zone Soil	RCLAKDPAARYQTADSIAQELYPLARHKPVTSVPAPQSNGNGLRDRAARLLRSA*
Ga0137360_109418151	3300012361	Vadose Zone Soil	AKDPAARYQTADSIAQELYPLARHKPVTSVPAPQTNGNGLRDRAARLLRSA*
Ga0137361_112225292	3300012362	Vadose Zone Soil	SHANPSLPAGFDGVVARCLAKDPSARYATTEALAEALYPLARRTVTPQAPPQTNGNGLRDRAARLLRSA*
Ga0137390_102670172	3300012363	Vadose Zone Soil	AKDPAARYAAAEALAGELYPFARRKTAPVPLPQSNSNGLRDRAARLLRSA*
Ga0137390_118734911	3300012363	Vadose Zone Soil	PSHANGSVPTAFDEVIARCLAKDPAMRYSGADALAGELYPLARRKLTAQIPTSANSNGLRDRAARLLRSA*
Ga0137358_101439632	3300012582	Vadose Zone Soil	PAGFDGVVARCLAKDPSARYATTEALAEALYPLARRKVTPQAPPQTNGSGLRDRAARLLLRSA*
Ga0137358_103709972	3300012582	Vadose Zone Soil	PPSHANPSVPANFDGIVARCLAKDPVARYAPAEPLAEELYPLARRKETPVPVLQTNGNGLRDRAARILRSA*
Ga0137398_102679932	3300012683	Vadose Zone Soil	RCLAKDPAARYAPAEALAEELYPLARRKETPVPVAPSNGHGLRDRAARLLRSA*
Ga0137396_100383801	3300012918	Vadose Zone Soil	LPPSHANPSVPANFDGIVARCLAKDPVARYAPAEALAEELYPLARRKETPVPVLQTNGNGLRDRAARILRSA*
Ga0137394_105216832	3300012922	Vadose Zone Soil	MPTGFDEVVARCLTKDPIARYAVAETLAEDLYPFARRKTVHQVSPQAVSNGNGLRDRAARLLRSA*
Ga0137413_116350531	3300012924	Vadose Zone Soil	VVSRCLAKDPFARYATAEALAQDLYPLARRKVIPQAAPQNNGNGLRDRAARLLRSA*
Ga0137416_100966481	3300012927	Vadose Zone Soil	SHANPSLPAGFDGVVARCLAKEPSARYATAEALAEDLYPLARHKVIPQAPPQSNGNGLRGRAARLLRSA*
Ga0137416_109110982	3300012927	Vadose Zone Soil	NPSLPAGFDGVVARCLAKDPSARYATTEALAEALYPLARRKVTPQAPPQTNGNGLRDRAARLLRSA*
Ga0137416_111002822	3300012927	Vadose Zone Soil	ARCLAKEPSARYATAEALAEDLYPLARHKVIPQAPPQTNGNGLRDRAARLLRSA*
Ga0137404_101686742	3300012929	Vadose Zone Soil	PANFDGIVARCLAKDPVARYAPAEALAEELYPLARRKETPVPVLQTNGNGLRDRAARILRSA*
Ga0137407_106566771	3300012930	Vadose Zone Soil	SMPTGFDEVVARCLTKDPIARYAVAETLAEDLYPFARRKTVHQVSPQTASNGNGLRDRAARLLRSA*
Ga0134075_102327382	3300014154	Grasslands Soil	AARYATAEALADQLYPLARRKTIPSSMPQAANGNGLRDRAARLLRSA*
Ga0134079_100055761	3300014166	Grasslands Soil	EVVSRCLAKDPSARYATGEALAQDLYPLARRKVIPQAAPQTHGNGLRDRAARLLRSA*
Ga0137414_12283292	3300015051	Vadose Zone Soil	KDPAVRYATAEALSEELYPLARRKTAPVSVPQSGGNGLRDRAARLLRSA*
Ga0134073_100392321	3300015356	Grasslands Soil	DPAARYAPAEALAEELYPLARRKETPVPVTQSNGNGHGLRDRAARLLRSA*
Ga0187802_102217612	3300017822	Freshwater Sediment	KDPAARYATAEALAEELYPLARRKVVEAPTPAASGNGNGLRDRAARLLRSA
Ga0187778_100620033	3300017961	Tropical Peatland	AKDPAARYQTAESLAEELYPFARHKVVQAPAPATNGNGNGLRDRAARLLRSA
Ga0187778_107668122	3300017961	Tropical Peatland	RHASAEALAQELYPLARRVPAPAAAVPQTNGNGNGHGLRDRAVRLLRSA
Ga0187780_104789462	3300017973	Tropical Peatland	VPAGFDQVVARCLAKDPEKRHATADALAEDLYPLARRAAAVAPVAPVQPSNGHGLRDRAARLLRSA
Ga0187822_103390032	3300017994	Freshwater Sediment	RGNASLPAEFDNLVARCLAKDPAARYAAADTLAQELYPLARRQPLPTPVPQPNVNGNGLRDRAARLLRSA
Ga0187769_100665691	3300018086	Tropical Peatland	CLAKDPVARHASAEALAQELYPLARRAPAPAAAVPQTNGSGNGHGLRDRAVRLLRSA
Ga0066662_101215643	3300018468	Grasslands Soil	SHANASVPASFDDLVARCLAKDPAARYAAADALAQELYPLARRAPLPAPMPQSNANGNGLRDRASRLLRSA
Ga0066669_113353662	3300018482	Grasslands Soil	AKDPSARYATGEALAQDLYPLARRKVIPQAAPQTNGNGLRDRAARLLRSA
Ga0137408_14187572	3300019789	Vadose Zone Soil	MPTGFDEVVARCLTKDPIARYAVAETLAEDLYPFARRKTVHQVSPQAVSNGNGLRDRAARLLRSA
Ga0179594_101203912	3300020170	Vadose Zone Soil	FDEVVARCLTKDPIARYAVAETLAEDLYPFARRKTVHQVSPQAVSNGNGLRDRAARLLRS
Ga0210407_104516472	3300020579	Soil	KDPAARYQTADALAEELYPLARRKTTTPVPVPQTNGNGLRDRAARLLRSA
Ga0210399_104103281	3300020581	Soil	FNAIVARCLAKDPAARYQTADALADELYPLARRKTTTSVPVPQTNGSGLRDRAARLLRSA
Ga0210404_103972061	3300021088	Soil	LAKDPSARYATTEALAEALYPLARRKATPQAPPQTNGNGLRERAARLLRSA
Ga0210404_104146371	3300021088	Soil	PAGFDGVVARCLAKDPAARYSTAEALAEELYPLARHKVIPQAPPHTNGNGLRDRAARLLRSA
Ga0210400_105415102	3300021170	Soil	KDPSARYATTEGLAEALYPLARRIVTPQAPPQTNGNGLRDRAARLLRSA
Ga0210384_115588462	3300021432	Soil	ELVSRCLAKDPIARYGMGETLAEDLYPFARRKTVPQPAPQSVGSGNGLRDRAARLLRTA
Ga0210409_100322911	3300021559	Soil	MGETLAEDLYPFARRKTVPQPAPQPVNTGSGFRDRAARLLRTA
Ga0224564_11184581	3300024271	Soil	VSRCLAKDPIARYAVAETLAEDLYPFARRKTVPQPAPQAVSNGNGGLRDRAARLLRTA
Ga0209237_10205424	3300026297	Grasslands Soil	ASFDDLVARCLAKDPAARYAAADALAQELYPLARRAPLPAPMPQSNANGNGLRDRASRLLRSA
Ga0209153_12684801	3300026312	Soil	LPAAFDEVVSRCLAKDPSARYATGEALAQDLYPLARRKVIPQAAPQTTGNGLRDRAARLLRSA
Ga0209154_10089885	3300026317	Soil	CLAKDPAARYAPAEALAEELYPLARRKETPVPVTQTNGNGHGLRDRAARLLRSA
Ga0209802_12382252	3300026328	Soil	AKDPAARYATAEALADQLYPLARRKTIPSSMPQAANGNGLRDRAARLLRSA
Ga0209158_11215651	3300026333	Soil	PSVPANFDGIVARCLAKDPVARYAPAEALAEELYPLARRKETPVPVLQTNGNGLRDRAARLLRSA
Ga0209377_11081901	3300026334	Soil	GIVARCLAKDPVARYAPAEALAEELYPLARRKETPVPVTQSNGNANGLRDRAARLLRSA
Ga0209159_10971551	3300026343	Soil	DEVVSRCLAKDPSARYATAEALAQDLYPLARRKVIPQAAPQTNGNGLRDRAARLLRSA
Ga0257150_10761702	3300026356	Soil	SLPAAFDGVVARCLAKEPSARYATAEALAEDLYPLARHKVIPQAPPQSNGNGLRDRAARLLRSA
Ga0257176_10711602	3300026361	Soil	GVVARCLAKEPSARYATAEALAEDLYPLARHKVIPQAPPQTNGNGLRDRAARLLRSA
Ga0257172_10932021	3300026482	Soil	ASFDGVVARCLAKDPAARYATAEALARDLYPLARHKVIPQAPPQTNGNGLRDRAARLLRS
Ga0257157_11008431	3300026496	Soil	CLAKDPVARYAPAEALAEELFPLARRRATPDPMPQTHGNGNGLRDRAARLLRSA
Ga0209806_10568872	3300026529	Soil	AKDPAARYAPAEALAEELYPLARRKETPVPVTQSNGNGHGLRDRAARLLRSA
Ga0209806_13328942	3300026529	Soil	AKDPAARYAPAEALAEELYPLARRKETPVPVTQTNGNGHGLRDRAARLLRSA
Ga0209648_102809471	3300026551	Grasslands Soil	IVARCLAKDPAARYAPAEALAEELFPLARRKTIAVPVSAPQTNGNGLRDRASRLLRSA
Ga0179593_10247211	3300026555	Vadose Zone Soil	PSARYATTEALAEALYPLARRTVIPQATPQTNGNGLRDRAARLLRSA
Ga0209074_100570522	3300027787	Agricultural Soil	ARCLAKDPKIRYATAEALAEELYPLARRKPAPVTVPQTGGNGLRDRAARLLRSA
Ga0209180_103843492	3300027846	Vadose Zone Soil	PMGFDEVVERCLAKDPAARYAAAEALAEELYPLARRIVIPQAPPQTNGNGVRNRATRLLRSA
Ga0209701_103766851	3300027862	Vadose Zone Soil	ARCLAKDPAARYQTADALAEELYPLARRKPATPVPLPQTNGSGLRDRAARLLRSA
Ga0209283_100414063	3300027875	Vadose Zone Soil	MGFDEVVARCLAKDPAARYAAAEALAEELYPLARRIVIPQAPPQTNGNGVRNRATRLLRS
Ga0307478_112819432	3300031823	Hardwood Forest Soil	LAKDPEKRHVTAEALAEDLYPLARRATVVAPVAPSNGNGHGLRDRAARLLRSA
Ga0307470_110198792	3300032174	Hardwood Forest Soil	ARYAVAETLAEDLYPFARRKTVHQVSPQTVSNSNGLRDRAARLLRSA
Ga0307471_1032921202	3300032180	Hardwood Forest Soil	PTGFDEVIARCLTKDPIARYAVAETLAEDLYPFARRKTVHQVSPQAVSNGNGLRDRAARLLRSA
Ga0307471_1036427882	3300032180	Hardwood Forest Soil	SVPANFDGIVARCLAKDPVARYAPAEALAEELYPLARRKETPVPALQGNGNGLRDRAARILRSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences