Metagenome / Metatranscriptome Family F077719

Overview

Basic Information

• Family ID: F077719
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 117
• Average Sequence Length: 72 residues
• Representative Sequence: MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATR
• Number of Associated Samples: 109
• Number of Associated Scaffolds: 117

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 84.62 %
• % of genes near scaffold ends (potentially truncated): 28.21 %
• % of genes from short scaffolds (< 2000 bps): 87.18 %
• Associated GOLD sequencing projects: 106
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (67.521 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.077 % of family members)
• Environment Ontology (ENVO): Unclassified (29.915 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (45.299 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 29.85%
  β-sheet: 29.85%
  Coil/Unstructured: 40.30%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF03795	YCII	5.98
PF00313	CSD	1.71
PF13460	NAD_binding_10	1.71
PF13817	DDE_Tnp_IS66_C	0.85
PF13407	Peripla_BP_4	0.85
PF03466	LysR_substrate	0.85
PF13378	MR_MLE_C	0.85
PF00346	Complex1_49kDa	0.85
PF16694	Cytochrome_P460	0.85
PF07311	Dodecin	0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.98
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.85
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.85
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.85
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.85
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.85
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.85
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.85
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.85

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.52 %
Unclassified	root	N/A	32.48 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.52 %
Unclassified	root	N/A	32.48 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.52 %
Unclassified	root	N/A	32.48 %

Level 4

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.25 %
Unclassified	root	N/A	32.48 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.39 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
Unclassified	root	N/A	32.48 %

Level 6

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	58.97 %
Unclassified	root	N/A	32.48 %

Level 7

Name	Rank	Taxonomy	Distribution
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	52.14 %
Unclassified	root	N/A	32.48 %

Level 8

Name	Rank	Taxonomy	Distribution
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	41.88 %
Unclassified	root	N/A	32.48 %

Level 9

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3.42 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	0.85 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	5.13 %
Rikenellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae	0.85 %
Unclassified	root	N/A	32.48 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	8.55 %

Level 10

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3.42 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	0.85 %
Bradyrhizobium sp. 1(2017)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1(2017)	4.27 %
Bradyrhizobium sp. AUGA SZCCT0182	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0182	0.85 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	3.42 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	5.13 %
Rikenella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Rikenella	0.85 %
Unclassified	root	N/A	32.48 %

Level 11

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3.42 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	0.85 %
Bradyrhizobium sp. 1(2017)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1(2017)	4.27 %
Bradyrhizobium sp. AUGA SZCCT0182	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0182	0.85 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	3.42 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	5.13 %
Rikenella microfusus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Rikenella → Rikenella microfusus	0.85 %
Unclassified	root	N/A	32.48 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2166559005|cont_contig109837	Not Available	536
2170459010|GIO7OMY01CIABS	Not Available	525
2170459011|GI3SL7401D370U	Not Available	519
3300000364|INPhiseqgaiiFebDRAFT_101915536	Not Available	516
3300001407|JGI20192J14887_1005273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1721
3300001593|JGI12635J15846_10055492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2995
3300001593|JGI12635J15846_10182336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1406
3300001593|JGI12635J15846_10867554	Not Available	516
3300001661|JGI12053J15887_10212490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	977
3300001661|JGI12053J15887_10486539	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Rikenella → Rikenella microfusus	589

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.85%
Environmental	Environmental	94.87%
Host-Associated	Host-Associated	4.27%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	12.82%
Modeled	Engineered → Modeled	0.85%
Plants	Host-Associated → Plants	4.27%
Terrestrial	Environmental → Terrestrial	82.05%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	4.27%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Sediment	Environmental → Aquatic → Sediment	6.84%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.85%
Soil	Environmental → Terrestrial → Soil	81.20%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.71%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.71%
Loam	Environmental → Terrestrial → Soil → Loam	21.37%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.42%

Subtype

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.85%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.56%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2166559005	Simulated microbial communities from Lyon, France	Engineered
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300001407	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012	Environmental
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0836.00006020	2166559005	Simulated	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIKIGLVKGSHMDGIRAAREERLRLIGKAMESTRM
F62_00218930	2170459010	Grass Soil	LWLIGIPEGTYLENAIEVRPFDLKISVSPHGGIDEWQWTLSIGNGAPIKIGLVKGSRMDGIRAAREERLGLIGKAMESTRMTHPKRP
F64_06339620	2170459011	Grass Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIKIGLVKGSHMDGIRAAREERLRLIG
INPhiseqgaiiFebDRAFT_1019155362	3300000364	Soil	MPSEYDPFDLRISVSPHGGIDEWQLTLSIGDDAPIESGVVKGARMDGIRAAREVRMRLIARAVEATR*
JGI20192J14887_10052733	3300001407	Arctic Peat Soil	MQSKYDPFDLEISVSPHGGIAEWQWTLSIGDGAPIEIGVVKGSRMDGIRAAREERMRLIGRAVEATR*
JGI12635J15846_100554922	3300001593	Forest Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIENGVVKGSRMDGIRAAGEERMRLIARAVEATCVCRRP*
JGI12635J15846_101823362	3300001593	Forest Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR*
JGI12635J15846_108675541	3300001593	Forest Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEKGVVKGSRMDGIRAAREERL
JGI12053J15887_102124901	3300001661	Forest Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIKIGVVKGSRMDGIRAAREERLRLICKAVEATRMRLHPKRPRDPNQLA
JGI12053J15887_104865391	3300001661	Forest Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRDDPPQTP*
JGIcombinedJ26739_1005055043	3300002245	Forest Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIETGVVKGSRMDGIRAAREERLRLIGNVWKPPDDPPQTP*
JGIcombinedJ26739_1011872001	3300002245	Forest Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLXGKAMEATR*
JGI25612J43240_10240991	3300002886	Grasslands Soil	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIVRAVEAIR*
Ga0062387_1009623902	3300004091	Bog Forest Soil	MPPEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRTAREERMRLIARAVEATRRPTTSSR*
Ga0062389_1004624614	3300004092	Bog Forest Soil	FDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRTAREERMRLIARAVEATRRPTTSSR*
Ga0066869_100721742	3300005165	Soil	MGLISFPEGTYSRMPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIVRAVEAIR*
Ga0066809_100805692	3300005168	Soil	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSSMDGIRAAREERMRLIVRAVEAIR*
Ga0066688_107320503	3300005178	Soil	FDLKISVCPHGGIDEWQWTLSIGNSAPIETGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0070683_1000624291	3300005329	Corn Rhizosphere	TSDEGSELSAADEMGLISHQGHICRMPSEYDPFDLTISVSPHGGIDEWQWTLSIEDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR*
Ga0070683_1002187005	3300005329	Corn Rhizosphere	MPSEYDPFDLKISVGPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVE
Ga0070680_1001526884	3300005336	Corn Rhizosphere	MPSEYDPFDLKISVGPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR*
Ga0070711_1007735322	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EYDPFDLKISVSPHGGIDEWQWTLSIGDDAPVASGVVKGSRMDGIRAAREERMRLIARAVDATR*
Ga0070705_1014480272	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EGTYLEDAIEVRPFDLKISVSPHGGIDEWQWTLSIGNRAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG*
Ga0066689_108041491	3300005447	Soil	MQSKYDPFDLEISVCPHGGIDEWQWTLSIGNGAPIKIGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0070699_1009436711	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVDATR*
Ga0066692_106954532	3300005555	Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIKIGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0066700_107656291	3300005559	Soil	HIWRMQSKYDPFDLKISVSPHGGIDEWQWTLSIGNRAPIEIGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0066905_1016753222	3300005713	Tropical Forest Soil	MQSKYDPFDLEISVSPRGGIDEWQWTLSIGNGAPMKVGVVKGSRMDGIRAAREERLRLIGKAIEATRKAT*
Ga0081540_100702017	3300005983	Tabebuia Heterophylla Rhizosphere	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPMKIGVVKGSRMDGIRAAREERLRLIGKAIEATRKAT*
Ga0075023_1000027375	3300006041	Watersheds	MLPEYDPFDLKISVSPHGGIDEWQWTLSIGDNAPIESGVVKGSRMDGIRAAREERMRLIVRAVEATR*
Ga0075018_103401062	3300006172	Watersheds	MPSEYDPFDLEISVSPHGGIDEWQWTLSIADDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR*
Ga0073928_102092192	3300006893	Iron-Sulfur Acid Spring	MHSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEKGVVKGSRMDGIRAAREERLRLIGKARKPPDDPPQTP*
Ga0099791_100268252	3300007255	Vadose Zone Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG*
Ga0099793_100659982	3300007258	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNRAPIEIGVVKGSRMDGIRAAREERLRLIGKAIEATRMTHPKRPKGTR*
Ga0099794_100184974	3300007265	Vadose Zone Soil	MQAKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRVDGIRAAREERLRLIGKAMEATR*
Ga0099795_101655792	3300007788	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG*
Ga0099829_112434282	3300009038	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNSAPIETGVVKGSRMDGIRAAREERLRLICKAMEATRMTHPKRPKGTR*
Ga0099792_108333651	3300009143	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAIEATRMTHPKRPKGTR*
Ga0105241_102804492	3300009174	Corn Rhizosphere	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR*
Ga0126380_102943831	3300010043	Tropical Forest Soil	MQSKHDPFDLEISVSPHGGIDEWQWTLSIGNGAPIKIGVVKGSRMDGIRAAREERLRLISKAIEATTRKAT*
Ga0099796_103349772	3300010159	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNRAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG*
Ga0126358_10661331	3300010856	Boreal Forest Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGALIEIGVVKGSRMDGIRAAREERLRLIGKANGSHPMTDPKR
Ga0126349_12941912	3300010861	Boreal Forest Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIEIGVVKGSRMDGIRAARAERMRLIARAVEATR*
Ga0137392_114005232	3300011269	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKVMEATKHPKRPRDTPS*
Ga0137391_106477251	3300011270	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAVEATRMTHPKRPKGTR*
Ga0137364_106669341	3300012198	Vadose Zone Soil	MQSKYDPFDLEISVCPHGGIDEWQWTLSIGNSAPIETGVVKGSRMDGIRAAREERLRLIGKVMEATKHPKRPRDTPS*
Ga0137399_102587992	3300012203	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNSAPIETGVVKGSRMDGIRAAREERLRLIGKAIEATRMTHPKRPKGTR*
Ga0137380_102725603	3300012206	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGSGAPIKIGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0137378_105431121	3300012210	Vadose Zone Soil	GHIWRMQSKYDPFDLKISVSRHGGIDEWQWTLSIGSGAPIKIGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0137372_101617681	3300012350	Vadose Zone Soil	MQSKYDPFDLKISVSRHGGIDEWQWTLSIGSGAPIKIGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0137367_106502522	3300012353	Vadose Zone Soil	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0137366_104659463	3300012354	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIKKGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR*
Ga0137397_111186311	3300012685	Vadose Zone Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIVRA
Ga0137394_101712732	3300012922	Vadose Zone Soil	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDGAPIESGVVKGSRMDGIRAAREERMRLIVRAVEAIR*
Ga0137419_107098482	3300012925	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLTLIGKAMEATRMTHHKRR*
Ga0137419_114114471	3300012925	Vadose Zone Soil	MPSDDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR*
Ga0137416_104031891	3300012927	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKVMEATKHPKRPRGGPS*
Ga0137404_110655241	3300012929	Vadose Zone Soil	MPSEYDPFDLRISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIVRAVEAIR*
Ga0137410_118291161	3300012944	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIKIGVVKGSRMDGIRAAREERLRLIGKAMEATR*
Ga0157378_133165781	3300013297	Miscanthus Rhizosphere	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGNRAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG*
Ga0163162_129795081	3300013306	Switchgrass Rhizosphere	LSPKGHIRGMPSEYDPFDLKISVSPQGGIYEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR*
Ga0167644_10009722	3300015206	Glacier Forefield Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATCVCRKP*
Ga0132256_1027149191	3300015372	Arabidopsis Rhizosphere	VMQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIKIGVVKGSRMDGIRAAREERLRLIGKAIEATCKAT*
Ga0184605_103125662	3300018027	Groundwater Sediment	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG
Ga0184618_104525971	3300018071	Groundwater Sediment	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGPPAAKHHRDE
Ga0184635_100083357	3300018072	Groundwater Sediment	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR
Ga0184635_100188382	3300018072	Groundwater Sediment	MPSQYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIVRAVEVEAIR
Ga0184612_105650911	3300018078	Groundwater Sediment	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR
Ga0193729_10276303	3300019887	Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLTLIGKAMEATRMTHPKRR
Ga0193751_10079312	3300019888	Soil	MHSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRKAT
Ga0193751_10677254	3300019888	Soil	DPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRK
Ga0193728_11199451	3300019890	Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRP
Ga0193755_12275872	3300020004	Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLTLIGKAMEATRMTHP
Ga0210403_111896512	3300020580	Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIETGVVKGSRMDGIRAAREERL
Ga0210401_101422013	3300020583	Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATR
Ga0210380_100649001	3300021082	Groundwater Sediment	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIVRAVEAIR
Ga0210405_101431853	3300021171	Soil	LIGIPEGTYLEDAIEYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATR
Ga0210396_102164201	3300021180	Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIETGVVKGSRMDGIRAAREERLRLIGKAMEATR
Ga0193699_104156231	3300021363	Soil	MQSEYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRR
Ga0193709_11234441	3300021411	Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRR
Ga0210392_105184901	3300021475	Soil	SKYDPFNLKISVSPHGGIDEWQWTLSIEDDAPIDSGVVKGSRMDGIRAAREERMRLIARAVEATR
Ga0210410_111060192	3300021479	Soil	MPSKYDPFSLKISVSPHGGIDEWQWTLSIGNGAPIKIGVVKGSRMDGIRAAREERLKLICKAVEATRMRLHPERP
Ga0242662_100219515	3300022533	Soil	FDLKISVSLHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR
Ga0212123_101338271	3300022557	Iron-Sulfur Acid Spring	MHSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEKGVVKGSRMDGIRAAREERLRLIGKARKPPDDPPQTP
Ga0208193_10232693	3300025463	Peatland	MPSEYDPYDLKISVSPHGGIDEWQWTLSIGYDAPIERGVVRGSRMDGIRAAREERMRLIARAVEATCVCRKP
Ga0207707_1000725615	3300025912	Corn Rhizosphere	MPSEYDPFDLKISVGPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR
Ga0207652_106906142	3300025921	Corn Rhizosphere	MPSEYDPFDLKISVGPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEAT
Ga0257170_10365591	3300026351	Soil	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREER
Ga0257149_10574382	3300026355	Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNRAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEVTRMTHPKRPKGTG
Ga0257152_10139012	3300026369	Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNRAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG
Ga0257146_10565992	3300026374	Soil	SLMQSKYDPFDLKISVSPHGGIDEWQWTLSIGNRAPIEIGVVKGSRMDGIRAAREERLRLIGKAIEATRMTHPKRPKGTR
Ga0257147_10691201	3300026475	Soil	IWRMQSKYDPFDLKISVRPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAIEATRMTHPKRPKGTG
Ga0257153_10160873	3300026490	Soil	MQSKYDPFDLKISVRPHGGIDEWQWTLSIGNGAPIEIGAVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG
Ga0209690_10587241	3300026524	Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIKIGVVKGSRMDGIRAAREERLRLICKAVEATRMKLHPKRPR
Ga0209648_101938862	3300026551	Grasslands Soil	KGHIWRMQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG
Ga0179587_103305862	3300026557	Vadose Zone Soil	MPSEYDPFDLKISVNPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERRD
Ga0208575_10061891	3300026920	Soil	MQSKYDPFDLEISVSHHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMKATR
Ga0208097_10462422	3300027173	Forest Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIETGVVKGSRMDGIRAAREERLR
Ga0209529_10462123	3300027334	Forest Soil	MPSEYDPFDLKISVSPRGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAPREERMRLIARAVEASCVCR
Ga0209179_10929932	3300027512	Vadose Zone Soil	MQSKYDPFDLKISVRPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTG
Ga0209219_10203132	3300027565	Forest Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIAKAVEATR
Ga0209331_11007101	3300027603	Forest Soil	VVDRAPPKGHIWRMQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATR
Ga0209530_10349721	3300027692	Forest Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIENGVVKGSRMDGIRAAGEERMRLIARAVEATCVCRRP
Ga0208989_102177011	3300027738	Forest Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRDDPPQTP
Ga0209448_101122062	3300027783	Bog Forest Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRTAREERMRLIARAVEATRRPTTSSR
Ga0209693_104688571	3300027855	Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRL
Ga0209283_108739962	3300027875	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRPKGTR
Ga0209488_102083492	3300027903	Vadose Zone Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAIEATRMTHPKRPKGTR
Ga0209006_101986094	3300027908	Forest Soil	MQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIETGVVKGSRMDGIRAAREERLRLIGNVWKPPDDPPQTP
Ga0209583_100011248	3300027910	Watersheds	MLPEYDPFDLKISVSPHGGIDEWQWTLSIGDNAPIESGVVKGSRMDGIRAAREERMRLIVRAVEATR
Ga0257175_10398442	3300028673	Soil	MQAKYDPFDLEISVNPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATRMTHPKRR
Ga0222749_102466012	3300029636	Soil	MPSEYDPFELEISVSPHRGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR
Ga0170818_1044199551	3300031474	Forest Soil	MQSKYDPFDLKISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAIESTRMTHAKRP
Ga0310686_1064449092	3300031708	Soil	MPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAGEERMRLIARAVEATCVCRRP
Ga0307477_102431713	3300031753	Hardwood Forest Soil	SVSPNGHIWRMQSKYDPFDLEISVSPHGGIDEWQWTLSIGNGAPIEIGVVKGSRMDGIRAAREERLRLIGKAMEATR
Ga0307471_1037546191	3300032180	Hardwood Forest Soil	MPSEYDPFDLKISVSLHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAREERMRLIARAVEATR
Ga0348332_120964682	3300032515	Plant Litter	MGLISLPEGLIRGMPSEYDPFDLKISVSPHGGIDEWQWTLSIGDDAPIESGVVKGSRMDGIRAAGEERMRLIARAVEASCVCRRP