Metagenome / Metatranscriptome Family F077716

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F077716
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	117 residues
Representative Sequence	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDDD
Number of Associated Samples	88
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.83 %
% of genes near scaffold ends (potentially truncated)	25.64 %
% of genes from short scaffolds (< 2000 bps)	86.32 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (61.538 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.026 % of family members)
Environment Ontology (ENVO)	Unclassified (39.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.650 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.56% β-sheet: 19.05% Coil/Unstructured: 69.39%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF07366	SnoaL	4.27
PF07992	Pyr_redox_2	4.27
PF07676	PD40	1.71
PF12973	Cupin_7	0.85
PF08240	ADH_N	0.85
PF13340	DUF4096	0.85
PF04546	Sigma70_ner	0.85
PF00166	Cpn10	0.85
PF14023	DUF4239	0.85
PF04932	Wzy_C	0.85
PF03692	CxxCxxCC	0.85
PF12770	CHAT	0.85
PF13586	DDE_Tnp_1_2	0.85
PF03050	DDE_Tnp_IS66	0.85
PF04851	ResIII	0.85
PF04392	ABC_sub_bind	0.85
PF00497	SBP_bac_3	0.85
PF08238	Sel1	0.85
PF13672	PP2C_2	0.85
PF13356	Arm-DNA-bind_3	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.85
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
All Organisms	root	All Organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
cellular organisms	root	All Organisms → cellular organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.71 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.40 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.55 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.71 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.42 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.71 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.85 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.85 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.85 %
Bradyrhizobium algeriense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense	0.85 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bradyrhizobium sp. Leo170	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	2.56 %
Rhizobium freirei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei	1.71 %
Bradyrhizobium sp. RP6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. RP6	0.85 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.85 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.85 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.85 %
Bradyrhizobium algeriense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense	0.85 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bradyrhizobium sp. Leo170	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	2.56 %
Rhizobium freirei PRF 81	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	1.71 %
Bradyrhizobium sp. RP6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. RP6	0.85 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.85 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.85 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.85 %
Bradyrhizobium algeriense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense	0.85 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402JX3XL	Not Available	508	Open in IMG/M
3300001545\|JGI12630J15595_10004625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2994	Open in IMG/M
3300001545\|JGI12630J15595_10024259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1271	Open in IMG/M
3300002245\|JGIcombinedJ26739_100139097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense	2293	Open in IMG/M
3300002245\|JGIcombinedJ26739_100204483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1866	Open in IMG/M
3300003505\|JGIcombinedJ51221_10085324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1244	Open in IMG/M
3300004152\|Ga0062386_100355932	Not Available	1174	Open in IMG/M
3300004152\|Ga0062386_101630767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	538	Open in IMG/M
3300005437\|Ga0070710_10034918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2738	Open in IMG/M
3300005437\|Ga0070710_10192996	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300005437\|Ga0070710_10580239	Not Available	778	Open in IMG/M
3300005439\|Ga0070711_101607877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300005602\|Ga0070762_10740917	Not Available	662	Open in IMG/M
3300005764\|Ga0066903_105860085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	645	Open in IMG/M
3300005921\|Ga0070766_10347536	Not Available	962	Open in IMG/M
3300006046\|Ga0066652_100824250	Not Available	887	Open in IMG/M
3300006047\|Ga0075024_100692195	Not Available	559	Open in IMG/M
3300006057\|Ga0075026_100112469	Not Available	1363	Open in IMG/M
3300006057\|Ga0075026_100149253	Not Available	1199	Open in IMG/M
3300006172\|Ga0075018_10379478	Not Available	714	Open in IMG/M
3300006175\|Ga0070712_100009385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6164	Open in IMG/M
3300006176\|Ga0070765_100328338	Not Available	1419	Open in IMG/M
3300006893\|Ga0073928_10026358	All Organisms → cellular organisms → Bacteria → Proteobacteria	5740	Open in IMG/M
3300010366\|Ga0126379_11540866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	770	Open in IMG/M
3300012198\|Ga0137364_10394035	Not Available	1036	Open in IMG/M
3300012208\|Ga0137376_11099390	Not Available	680	Open in IMG/M
3300012918\|Ga0137396_10604920	Not Available	811	Open in IMG/M
3300012951\|Ga0164300_10758668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300012957\|Ga0164303_10456564	Not Available	806	Open in IMG/M
3300012958\|Ga0164299_10979184	Not Available	621	Open in IMG/M
3300012985\|Ga0164308_10342441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300016270\|Ga0182036_10049267	Not Available	2637	Open in IMG/M
3300016294\|Ga0182041_11199779	Not Available	692	Open in IMG/M
3300016341\|Ga0182035_10191217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300016357\|Ga0182032_10277018	Not Available	1315	Open in IMG/M
3300016371\|Ga0182034_10624757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	911	Open in IMG/M
3300016387\|Ga0182040_10099241	Not Available	1971	Open in IMG/M
3300016445\|Ga0182038_10694237	Not Available	886	Open in IMG/M
3300016445\|Ga0182038_11776444	Not Available	556	Open in IMG/M
3300018468\|Ga0066662_10923661	Not Available	859	Open in IMG/M
3300019887\|Ga0193729_1193493	Not Available	700	Open in IMG/M
3300020579\|Ga0210407_10271211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1323	Open in IMG/M
3300020579\|Ga0210407_10671082	Not Available	805	Open in IMG/M
3300020580\|Ga0210403_10354537	Not Available	1200	Open in IMG/M
3300020580\|Ga0210403_10841305	Not Available	727	Open in IMG/M
3300020581\|Ga0210399_10203205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1648	Open in IMG/M
3300020581\|Ga0210399_10599963	Not Available	911	Open in IMG/M
3300020583\|Ga0210401_10800173	Not Available	803	Open in IMG/M
3300021088\|Ga0210404_10196871	Not Available	1079	Open in IMG/M
3300021088\|Ga0210404_10446937	Not Available	727	Open in IMG/M
3300021168\|Ga0210406_10040906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4112	Open in IMG/M
3300021168\|Ga0210406_10182907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1745	Open in IMG/M
3300021168\|Ga0210406_10317271	Not Available	1264	Open in IMG/M
3300021168\|Ga0210406_10676865	Not Available	797	Open in IMG/M
3300021170\|Ga0210400_10220961	Not Available	1544	Open in IMG/M
3300021171\|Ga0210405_10699066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300021171\|Ga0210405_10955502	Not Available	648	Open in IMG/M
3300021178\|Ga0210408_10228005	Not Available	1483	Open in IMG/M
3300021178\|Ga0210408_10375923	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300021401\|Ga0210393_10538680	Not Available	954	Open in IMG/M
3300021403\|Ga0210397_10334744	Not Available	1119	Open in IMG/M
3300021404\|Ga0210389_11549515	Not Available	503	Open in IMG/M
3300021405\|Ga0210387_10018873	All Organisms → cellular organisms → Bacteria → Proteobacteria	5360	Open in IMG/M
3300021405\|Ga0210387_10557098	Not Available	1019	Open in IMG/M
3300021407\|Ga0210383_11353211	Not Available	594	Open in IMG/M
3300021420\|Ga0210394_10876793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300021475\|Ga0210392_10091741	All Organisms → cellular organisms → Bacteria	1979	Open in IMG/M
3300021475\|Ga0210392_10221049	Not Available	1331	Open in IMG/M
3300021475\|Ga0210392_10444330	Not Available	950	Open in IMG/M
3300021475\|Ga0210392_10975401	Not Available	634	Open in IMG/M
3300021478\|Ga0210402_10018835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5920	Open in IMG/M
3300021478\|Ga0210402_10522949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1101	Open in IMG/M
3300021478\|Ga0210402_10546951	Not Available	1074	Open in IMG/M
3300021478\|Ga0210402_11144315	Not Available	705	Open in IMG/M
3300021479\|Ga0210410_10403947	Not Available	1224	Open in IMG/M
3300021559\|Ga0210409_10135086	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300022557\|Ga0212123_10029199	All Organisms → cellular organisms → Bacteria	5748	Open in IMG/M
3300025898\|Ga0207692_10131317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1415	Open in IMG/M
3300025898\|Ga0207692_10157668	Not Available	1305	Open in IMG/M
3300025898\|Ga0207692_10541333	Not Available	743	Open in IMG/M
3300025915\|Ga0207693_10820085	Not Available	716	Open in IMG/M
3300025929\|Ga0207664_10767029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	867	Open in IMG/M
3300026494\|Ga0257159_1099888	Not Available	509	Open in IMG/M
3300027297\|Ga0208241_1027213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	872	Open in IMG/M
3300027521\|Ga0209524_1002234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3404	Open in IMG/M
3300027537\|Ga0209419_1073218	Not Available	675	Open in IMG/M
3300027603\|Ga0209331_1034846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1291	Open in IMG/M
3300027605\|Ga0209329_1089255	Not Available	671	Open in IMG/M
3300027610\|Ga0209528_1096967	Not Available	652	Open in IMG/M
3300027651\|Ga0209217_1077308	Not Available	971	Open in IMG/M
3300027663\|Ga0208990_1203746	Not Available	501	Open in IMG/M
3300027727\|Ga0209328_10056490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300027738\|Ga0208989_10103834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300027824\|Ga0209040_10116231	Not Available	1490	Open in IMG/M
3300027915\|Ga0209069_10880101	Not Available	541	Open in IMG/M
3300028047\|Ga0209526_10038615	Not Available	3360	Open in IMG/M
3300028047\|Ga0209526_10141067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	1690	Open in IMG/M
3300028047\|Ga0209526_10307086	Not Available	1072	Open in IMG/M
3300029636\|Ga0222749_10546396	Not Available	630	Open in IMG/M
3300031545\|Ga0318541_10651530	Not Available	589	Open in IMG/M
3300031546\|Ga0318538_10435377	Not Available	710	Open in IMG/M
3300031573\|Ga0310915_10479819	Not Available	884	Open in IMG/M
3300031719\|Ga0306917_10622151	Not Available	849	Open in IMG/M
3300031744\|Ga0306918_10127500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1853	Open in IMG/M
3300031821\|Ga0318567_10524041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	673	Open in IMG/M
3300031879\|Ga0306919_10220258	Not Available	1418	Open in IMG/M
3300031890\|Ga0306925_10429314	Not Available	1414	Open in IMG/M
3300031910\|Ga0306923_10203667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	2263	Open in IMG/M
3300031941\|Ga0310912_10333880	Not Available	1176	Open in IMG/M
3300031942\|Ga0310916_10276075	Not Available	1420	Open in IMG/M
3300031946\|Ga0310910_10707368	Not Available	796	Open in IMG/M
3300031947\|Ga0310909_10287067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. RP6	1378	Open in IMG/M
3300031947\|Ga0310909_10808073	Not Available	774	Open in IMG/M
3300032035\|Ga0310911_10894602	Not Available	512	Open in IMG/M
3300032261\|Ga0306920_100168702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3263	Open in IMG/M
3300032261\|Ga0306920_100263934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	2568	Open in IMG/M
3300033289\|Ga0310914_10353330	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.45%
Aquatic	Environmental → Aquatic	8.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.45%
Sediment	Environmental → Aquatic → Sediment	4.27%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.10%
Loam	Environmental → Terrestrial → Soil → Loam	27.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08121230	2189573004	Grass Soil	MILIALLAAPLALTSVEFCAAAPEPPATKPPECHWRMVDGKKCYFRADKLLPRGGLVWSYDVKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD
JGI12630J15595_100046253	3300001545	Forest Soil	MMTIALLAAPLALTSVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGVTVKGRRHYAPRELKAIGPIKRRMRESDQPPPKHKKIRTRRRRDNDDDD*
JGI12630J15595_100242592	3300001545	Forest Soil	MVLVVLLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADRLLPREDLVWSYDAKQFDLNEGATVKGRRHYTAQELKAIAAMERRKRADDQPEPKPRKHRPHHRRVNDEDD*
JGIcombinedJ26739_1001390971	3300002245	Forest Soil	MVIVALLAAPITLIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGATVKGQRHYTVQELKAIAATKRQMRADEQPQLKRKKLRPRRRRVKDQDE*
JGIcombinedJ26739_1002044833	3300002245	Forest Soil	MMTIALLAAPLALTSVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIKRRMRESDQPPPKHKKIRTRRRRDN
JGIcombinedJ51221_100853241	3300003505	Forest Soil	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRYYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNDDDD*
Ga0062386_1003559322	3300004152	Bog Forest Soil	MMIIALLAAPLALTSVEFCSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGARVKGRRQYTPQELKAIATERQMREDDQAPAKRKKIRGRPSRDNDDDD*
Ga0062386_1016307671	3300004152	Bog Forest Soil	MGNFGGATFAGQPVILIALLAAPLMFTSVEFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATVKGRRHYTLQELKAMAAIERRIREDDHPPKRKKIRARRRRD
Ga0070710_100349182	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHHTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDND*
Ga0070710_101929962	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGNFGGATFGGQPVILIALLAAPLMLTSVEFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATVKGRRHYTPQELKAMAAIERRIREDDHPPKRKKIRARRRRDSDDND*
Ga0070710_105802391	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKAIGGVERQTRKDDEQPTRRKKLRKGRRRNNDDED*
Ga0070711_1016078772	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QPMMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDND*
Ga0070762_107409171	3300005602	Soil	MITITLLAAPLALTLVEFCSAAPEPPATKPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATIKGRRHYTPRELNAISTMERQMRQDDQSPPKRTKIRGRRRGGNDDDD*
Ga0066903_1058600852	3300005764	Tropical Forest Soil	VFHEWCHSMVMVALLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTAQELKAIATTGRRVRADEQPLSKPKKIRPRRRRDNDEDDD*
Ga0070766_103475362	3300005921	Soil	MITITLLAAPLALTLVEFCSAAPEPPAAEPPEWHWRMVDGKKCYFRADKLLPRKNLVWSYDAKQLDLDEGATIRDQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDKD*
Ga0066652_1008242501	3300006046	Soil	MITITLLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATVKARRYYTPQELKAIAAVERQMRKVDEQ
Ga0075024_1006921952	3300006047	Watersheds	MILIALLAAPLALTSVEFCAAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD*
Ga0075026_1001124693	3300006057	Watersheds	MILFALLAAPLWLTSIEFCSSAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDANQLDLDQGATVKGQRHYTPQELKATAVIERRMRTDDQ
Ga0075026_1001492533	3300006057	Watersheds	MILIALLAAPLALTSVEFCAAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDVKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD*
Ga0075018_103794782	3300006172	Watersheds	MILIALLAAPLALTSVEFCAAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATIKGRRHYTPRELNAISTMERQMRQDDQSPPKRTKIRGRRRGGNDDDD*
Ga0070712_1000093852	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDND*
Ga0070765_1003283382	3300006176	Soil	MITITLLAAPLALTLVEFCSAAPEPPATKPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRDQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDKD*
Ga0073928_100263584	3300006893	Iron-Sulfur Acid Spring	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLIWSYDAKQLDLDEGATVRGRRHYTPQELKAIAAVERQMRKDDEQPTKRKKVRKGRRRNNDDED*
Ga0126379_115408662	3300010366	Tropical Forest Soil	LITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTAQELKAIATTGQRVRADEQPLSKPKKIRPRRSRDNDEDDD*
Ga0137364_103940352	3300012198	Vadose Zone Soil	MIALALLAAPLALTWAEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLSRDNLIWSYEAKQLDLDEGATVRGRRHYTPQQLKATVGVERQIGKDDDQPPKRKKIREGRRRKNGDKD*
Ga0137376_110993901	3300012208	Vadose Zone Soil	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKKLDLDEGATVRGQRHYAPQELKAIAIERRMREDDQAPPKRKKIRGRPRRDNDDDD*
Ga0137396_106049202	3300012918	Vadose Zone Soil	MILIALLAVPLALTSVEFCSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKKLDLDEGATVRGQRHYAPQELKAIAIERRMREDDQAPPKRKKIRGRPRRDNDDDD*
Ga0164300_107586681	3300012951	Soil	MTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDDD*
Ga0164303_104565641	3300012957	Soil	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDDD*
Ga0164299_109791841	3300012958	Soil	PAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATVKGRRHYTPQELKAMAAIEHRIREDDHPPKRKKIRARRRRDSDDND*
Ga0164308_103424411	3300012985	Soil	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDDD*
Ga0182036_100492675	3300016270	Soil	MVIVALLAAPMALIAVEFCSSKPEPAATEPPEWHWRMVAGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGGTVKGRRHYTVRELKAIAATKRHMRADEQPPLKRKKLQPRRKRVKEREDD
Ga0182041_111997792	3300016294	Soil	VFHEWCRSMVLVALLAAPLALITVEFCSFKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTAQELKAIATTGRRVRVDEQLPPKPKKIRPRRRRVDDEDDD
Ga0182035_101912173	3300016341	Soil	MVIVALLAAPMALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLGWSYDAKQFDLNEGGTVKGRRHYTVREVKAIAATKRHMRADEQPPLKRKKPQPRRKR
Ga0182032_102770182	3300016357	Soil	MVLVALLAAPLALITVEFCSFKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTAQELKAIATTGRRVRADEQPLSKPKKIRPRRRRDNDEDDD
Ga0182034_106247572	3300016371	Soil	MVLVALLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTAQELKAIATTGRRVRADEQPLSKPKKIRPRRSRDNDEDDD
Ga0182040_100992411	3300016387	Soil	VEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGGTVKGRRHYTVRELKAIAATKPHVRAVEQPPLKRKKLQPRRKRVKEREDD
Ga0182038_106942372	3300016445	Soil	RSMVLVALLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDARHFDRDEGGTVKGQRHYTAQELKAIATTGRRVRADEQPLSKPKKIRPRRRRDNDEDDD
Ga0182038_117764441	3300016445	Soil	MVPFHGAGCVACAPLALITVEFCSSKPEPAAAEPPEWHWRMVDGKKCYFRADKLLPREDLVCSFDAKQFDLNEGGTVKGRRHYTLQELKAIAVMKRSTRAHEQPLPKRKKIQPRRRRVNNED
Ga0066662_109236612	3300018468	Grasslands Soil	MITITLLAAPLALTLVEFCSAAPEPPATKPPEWHWRLVDGKRCYFRADKLLPRDNLIWNYEGKQLDLDEGATVRGRRHYTPQQLKATVGVERQIGKDDDQPPKRKKIRKGSGRKK
Ga0193729_11934931	3300019887	Soil	MTIALLAAPLALTSVEFCSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDVKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRERRRGGNDDDD
Ga0210407_102712111	3300020579	Soil	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKRYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRYYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0210407_106710821	3300020579	Soil	MILIALLAAPLALTSVEFCAAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKKLDLDEGTTVRGQRHYAPQELKAIAIERQMREDDRAPPKRKKIRGRPSRDNDDDD
Ga0210403_103545371	3300020580	Soil	MILIALLAAPLALTSVEFCAAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDVKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD
Ga0210403_108413052	3300020580	Soil	LMLTSVEFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATVKGRRHYTPQELKAMAAIEHRIPRGRSSAQAQENPCAPQAR
Ga0210399_102032051	3300020581	Soil	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKRYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0210399_105999632	3300020581	Soil	MILIALLAVPLALTPVEFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDED
Ga0210401_108001732	3300020583	Soil	MIIALLAAPLALTSVEFCSAAPEPPATAPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATVKGRRHYTPQELKAMAAIERRIREDDHPPKRKKIRARRRRDSDDND
Ga0210404_101968712	3300021088	Soil	MITITLLAAPLALTLVEFCSAAPEPPATKPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDED
Ga0210404_104469371	3300021088	Soil	MMIIALLATPLALTSVEFCSAAPEPPATAPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATVKGRRHYTPQELQAMAAIERRIREDDHPPKRKKIRARRRRHSDDND
Ga0210406_100409065	3300021168	Soil	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRYYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0210406_101829071	3300021168	Soil	MITITLLAAPLALTLVEFCSAAPEPPAAEPPEWHWRMVDGKKCYFRADKLLPRNNLVWSYDAKQLDLDEGATIRDQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDKD
Ga0210406_103172712	3300021168	Soil	MILIALLAAPLALTSVEFCAAAPEPPASEPPEWHWRMVNGKKCYFRAEKLLPREDLVWSYDAKQLDLDEGATVKGRRHYTPQELKAISAMERQMRQDDKSPPKRTKIGGRRRRGNNDDD
Ga0210406_106768651	3300021168	Soil	MMIIALLAAPLALTSVEFCSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGARVKGRRQYTPQELKAIATERQMREDDQASAKRKKIRGRPSRDNDDDD
Ga0210400_102209611	3300021170	Soil	MILIALLAVPLALTPVEFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDKD
Ga0210405_106990662	3300021171	Soil	MTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRYYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0210405_109555021	3300021171	Soil	MITITLLAAPLALTLVEFCSAAPEPPAAEPPEWHWRMVDGKKCYFRADKLLPRKNLVWSYDAKQLDLDEGATIRDQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDKD
Ga0210408_102280051	3300021178	Soil	MITITLLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRVNLVWSYDAKQLDLDEGATIRGQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDED
Ga0210408_103759232	3300021178	Soil	VILIALLAAPLMLTSVEFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATVKGRRHYTPQELKAMAAIERRIREDDHPPKRKKIRARRRRDSDDND
Ga0210393_105386801	3300021401	Soil	MITITLLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDVKQLDLDEGATIKGRRHYTPRELNAIPAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD
Ga0210397_103347441	3300021403	Soil	MITITLLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDED
Ga0210389_115495151	3300021404	Soil	EFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATVKGRRHYTPQELQAMAAIERRIREDDHPPKRKKIRARRRRNSDDDD
Ga0210387_100188732	3300021405	Soil	MLAGTFGGESMITITLLAAPLALTLVEFCSAAPEPPATKPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRDQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDKD
Ga0210387_105570981	3300021405	Soil	MMIIALLAAPLALTSVEFCSAAPQPPATEPPEWHWSMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGARVKGRRQYTPQELKAIATERQMREDDQASAKRKKIRGRPSRDNDDDD
Ga0210383_113532111	3300021407	Soil	LDFCYGNRNMLAGTFGGESMITITLLAAPLALTLVEFCSAAPEPPAAEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRDQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDKD
Ga0210394_108767932	3300021420	Soil	MMIIALLAAPLALTSVEFCSAAPEPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRYYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0210392_100917412	3300021475	Soil	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRYYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDDD
Ga0210392_102210493	3300021475	Soil	GSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD
Ga0210392_104443302	3300021475	Soil	MITITLLAAPLALTLVEFCSAAPEPPATKPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRDQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDED
Ga0210392_109754011	3300021475	Soil	IIALLAAPLALTSVEFCSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGARVKGRRQYTPQELKAIATERQMREDDQAPAKRKKIRGRPSRDNDDDD
Ga0210402_100188353	3300021478	Soil	MILIALLAAPLALTSVEFCAAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDVKQLDLDEGATIKGRRHYTPRELNAISTMERQMRQDDQSPPKRTKIRGRRRGGNDDDD
Ga0210402_105229492	3300021478	Soil	MILIALLAVPLALTSVEFCSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKKLDLDEGTTVRGQRHYAPQELKAIAIERQMREDDRAPPKRKKIRGRPSRDNDDDD
Ga0210402_105469511	3300021478	Soil	MITITLLAAPLALTLVEFCSAAPEPPATKPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKATGGVERQMGKDVEQP
Ga0210402_111443151	3300021478	Soil	MILIALLALPLALTSVEFCSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKKLDLDEGTTVRGQRHYTPHELKAIAIERPMREDDQAPPKRKKIRGRPSRDNDDDD
Ga0210410_104039472	3300021479	Soil	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDED
Ga0210409_101350862	3300021559	Soil	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0212123_100291994	3300022557	Iron-Sulfur Acid Spring	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLIWSYDAKQLDLDEGATVRGRRHYTPQELKAIAAVERQMRKDDEQPTKRKKVRKGRRRNNDDED
Ga0207692_101313171	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MMTIALLAAPLALASVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNGDND
Ga0207692_101576681	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKAIGGVERQTRKDDEQPTRRKKLRKGRRRNNDDED
Ga0207692_105413332	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MMIIALLATPLALTSVEFCSAAPEPPATAPPEWHWRMVDGKKCYFRADKLLPRENLVWFYDAKQLDLDEGATVTGRRQYTPQELKAIATIERRMREDE
Ga0207693_108200851	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MILIALLAVPLALTPVEFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKAIAGVERQTRKDDEQPTRR
Ga0207664_107670291	3300025929	Agricultural Soil	VILIALLAAPLMLTSVEFCSPAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATVKGRRHYTPQELKAMAAIERRIREDDHPPKRKKIRARRRRDS
Ga0257159_10998881	3300026494	Soil	MITTALLAAPLALTLIEFCSTAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIKRRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0208241_10272132	3300027297	Forest Soil	MITITLLAAPLALTLVEFCSAAPEPPATKPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDVKQLDLDEGATIKGRRHYTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0209524_10022345	3300027521	Forest Soil	MMTIALLAAPLALTSVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGVTVKGRRHYAPRELKAIGPIKRRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0209419_10732182	3300027537	Forest Soil	MTIALLAAPLALTSVEFCAAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDVKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD
Ga0209331_10348461	3300027603	Forest Soil	MVIVALLAAPITLIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGATVKGQRHYTVQELKAIAATKRQMRADEQPQLKRKKLRPRRRRVKDQDE
Ga0209329_10892552	3300027605	Forest Soil	APEPPAAEPPEWHWRMVDGKKCYFRADKLLPRKNLVWSYDAKQLDLDEGATIRDQRHYTPQELKATGGVERQMGKDDEQPTRRKKLRKGRGRNNDDKD
Ga0209528_10969671	3300027610	Forest Soil	MTIALLAAPLALTSVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGVTVKGRRHYAPRELKAIGPIKRRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0209217_10773081	3300027651	Forest Soil	MTIALLAAPLALTSVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIKRRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0208990_12037461	3300027663	Forest Soil	MTIALLAAPLALTSVEFCSAAPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGVTVKGRRHYAPRELKAIGPIKRRMRESDQPPPKHKKI
Ga0209328_100564902	3300027727	Forest Soil	MTIALLAAPLALTSVEFCSATPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLRTYDAKQLDLDEGATVKGRRHYTPRELKAIGPIKRRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0208989_101038341	3300027738	Forest Soil	PMMTIALLAAPLALTSVEFCSATPDPPATAPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGVTVKGRRHYAPRELKAIGPIKRRMRESDQPPPKHKKIRTRRRRDNDDDD
Ga0209040_101162313	3300027824	Bog Forest Soil	MILIALLAVPLALTSVEFCSAAPQPPATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDVKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD
Ga0209069_108801011	3300027915	Watersheds	PEPPATEPPGWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQLDLDEGATIKGRRHYTPRELNAISAMERQMRQDDQSPPKRTKIRGRRRGGNDDDD
Ga0209526_100386156	3300028047	Forest Soil	MITITLLAAPLALTLVEFCSAAPEPPATELPEWHWRMVDGKKCYFRADKLLPRENLVWSYDAKQLDLDEGATIRGQRHYTPQELKAIAGVERQTRKEDEQPIRRKKLRKGRRRNNDDED
Ga0209526_101410673	3300028047	Forest Soil	MVLVVLLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADRLLPREDLVWSYDAKQFDLNEGATVKGRRHYTAQELKAIAAMERRKRADDQPEPKPRKHRPHHRRVNDEDD
Ga0209526_103070861	3300028047	Forest Soil	MVIVALLAAPIMLIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGATVKGRRHYTVQELKAIAATKRQMRADEQPQLKRKKLRPRRRRVKDQDE
Ga0222749_105463961	3300029636	Soil	MITIALLAAPLALTLVEFCSAAPEPPATEPPEWHWRMVDGKKCYFRADKLLPREDLLWTYDAKQLDLDEGATVKGRRHHTPRELKAIGPIERRMRESDQPPPKHKKIRTRRRRDNG
Ga0318541_106515302	3300031545	Soil	MVLVALLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTARELKAIATTGRRVRADEQTLSKPKKIRPRRRRDNDEDDD
Ga0318538_104353771	3300031546	Soil	MVIVALLAAPMALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGGTVKGRRHYTVRELKAIAATKPHVRAVEQPPLKRKKLQPRRKRVKEREDD
Ga0310915_104798191	3300031573	Soil	MVIVALLAAPMALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQFDLNEGGTVKGRRHYTVRELKAIAATKRHMRADEQPSLKRKKPQLRRKRVEERGDD
Ga0306917_106221512	3300031719	Soil	MVIVALLAAPMALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGGTVKGRRHYTVRELKAIAATKRHMRADEQPPLKRKKLQPRRKRVKEREDD
Ga0306918_101275003	3300031744	Soil	MVIVALLAAPIALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPREDLVCSFDAKQFDLNEGGTVKGRRHYTVRELKAIAATKPHVRAVEQPPLKRKKLQPRRKRVKEREDD
Ga0318567_105240411	3300031821	Soil	MVIVALLAAPMALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQFDLNEGATVKGRRHYTLRELKAIAAVKRSTHADEQPLPKRKKIRPRRKRVNDED
Ga0306919_102202582	3300031879	Soil	MVIVALLAAPMALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGGTVKGRRHYTVRELKAIAATKRHMRADEQPSLKRKKPQLRRKRVEERGDD
Ga0306925_104293141	3300031890	Soil	MVIVALLAAPAALIMVEFCSSKPEPVATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQFDLNEGVTVKGRRHYTVQELKAIAAMKRSARADEQPQ
Ga0306923_102036671	3300031910	Soil	MVLVALLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTAQELKAIATTGRRVRVDEQLPPKPKKIRPRRRRVDDEDDD
Ga0310912_103338801	3300031941	Soil	MVIVALLAAPMALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGGTVKGRRHYTVRELKAIAATKRHMRADEQPSLKRKK
Ga0310916_102760752	3300031942	Soil	MIVALLAAPIALVAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPKEDLVWSYDAKQFDLNEGGTVKGRRHYTVRELKAIAATKRHMRADEQPSLKRKKPQLRRKRVEERGDD
Ga0310910_107073681	3300031946	Soil	MVLVALLAAPLALITVEFCSFKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTARELKAIATTGRRVRADEQTLSKPKKIRPRRRRDNDEDDD
Ga0310909_102870672	3300031947	Soil	MVIVALLAAPIALIAVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQFDLNEGATVKGRRHYTLRELKAIAAVKRSTHADEQPLPKRKKIRPRRKRVNDED
Ga0310909_108080731	3300031947	Soil	ALLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTARELKAIATTGRRVRADEQTLSKPKKIRPRRRRDNDEDDD
Ga0310911_108946021	3300032035	Soil	HEWCRSMVLVALLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDARQFDRDEGGTVKGQRHYTAQELKAIATTGRRVRADEQPLSKPKKIRPRRRRDNDEDDD
Ga0306920_1001687022	3300032261	Soil	MVIVALLAAPAALIMVEFCSSKPEPVATEPPEWHWRMVDGKKCYFRADKLLPREDLVWSYDAKQFDLNEGVTVKGRRHYTVQELKAIAAMKRSARADEQPQRKRKKIRPRRRPIDDEDD
Ga0306920_1002639342	3300032261	Soil	MVLVALLAAPLVLITVEFCSTKPEPAATEPPEWHWRLVDGKKCYFRANKLLPKEDLVWSYDAKQFDRDEGGTVKGQRHYTAQELKAIATTGRRVRVDEQLPPKPKKIRPRRRRVDDEDDD
Ga0310914_103533302	3300033289	Soil	MVLVALLAAPLALITVEFCSSKPEPAATEPPEWHWRMVDGKKCYFRANKLLPKEDLVWSYDARQFDRDEGGTVKGQRHYTAQELKAIATTGRRVRADEQPLSKPKKIRPRRRRDNDEDDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077716

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences