Metagenome / Metatranscriptome Family F077691

Basic Information
Family ID	F077691
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	47 residues
Representative Sequence	DELAAILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRPADLFRE
Number of Associated Samples	91
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.09 %
% of genes near scaffold ends (potentially truncated)	76.07 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (76.068 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.880 % of family members)
Environment Ontology (ENVO)	Unclassified (51.282 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.89% β-sheet: 15.28% Coil/Unstructured: 70.83%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04255	DUF433	5.98
PF13546	DDE_5	4.27
PF04392	ABC_sub_bind	1.71
PF05016	ParE_toxin	1.71
PF12728	HTH_17	1.71
PF07969	Amidohydro_3	1.71
PF05869	Dam	1.71
PF07690	MFS_1	1.71
PF10686	YAcAr	1.71
PF13419	HAD_2	0.85
PF00884	Sulfatase	0.85
PF02899	Phage_int_SAM_1	0.85
PF13370	Fer4_13	0.85
PF12760	Zn_Tnp_IS1595	0.85
PF02534	T4SS-DNA_transf	0.85
PF04909	Amidohydro_2	0.85
PF11800	RP-C_C	0.85
PF01381	HTH_3	0.85
PF07992	Pyr_redox_2	0.85
PF13489	Methyltransf_23	0.85
PF04471	Mrr_cat	0.85
PF14234	DUF4336	0.85
PF03693	ParD_antitoxin	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	5.98
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.71
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.85
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.85
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.85
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.07 %
Unclassified	root	N/A	23.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.07 %
Unclassified	root	N/A	23.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.07 %
Unclassified	root	N/A	23.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.83 %
Unclassified	root	N/A	23.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.44 %
Unclassified	root	N/A	23.93 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.71 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	32.48 %
Unclassified	root	N/A	23.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.27 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.85 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.48 %
Unclassified	root	N/A	23.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.85 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.85 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.85 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.85 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.85 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.48 %
Unclassified	root	N/A	23.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.71 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.85 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.85 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.85 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.48 %
Unclassified	root	N/A	23.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.71 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.71 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	0.85 %
unclassified Beijerinckia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia	0.85 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.85 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.48 %
Unclassified	root	N/A	23.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.71 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.71 %
Azospirillum sp. RU38E	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. RU38E	0.85 %
Beijerinckia sp. L45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. L45	0.85 %
unclassified Nostoc	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc	0.85 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.48 %
Unclassified	root	N/A	23.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.71 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.71 %
Nostoc sp. 'Peltigera membranacea cyanobiont' 232	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. 'Peltigera membranacea cyanobiont' 232	0.85 %
Azospirillum sp. RU38E	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. RU38E	0.85 %
Beijerinckia sp. L45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. L45	0.85 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120703860	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300003505\|JGIcombinedJ51221_10033893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1874	Open in IMG/M
3300004081\|Ga0063454_101475589	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300004091\|Ga0062387_101225213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300004092\|Ga0062389_102065058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300005363\|Ga0008090_15659651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. L45	645	Open in IMG/M
3300005564\|Ga0070664_101476785	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300006173\|Ga0070716_100197410	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300006175\|Ga0070712_100792218	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300006175\|Ga0070712_101241215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300006796\|Ga0066665_11062689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300006800\|Ga0066660_11056809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300006806\|Ga0079220_12149155	Not Available	501	Open in IMG/M
3300007258\|Ga0099793_10695729	Not Available	513	Open in IMG/M
3300009012\|Ga0066710_104157218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300009553\|Ga0105249_11000020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	905	Open in IMG/M
3300009792\|Ga0126374_11427768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300010048\|Ga0126373_10946424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	926	Open in IMG/M
3300010371\|Ga0134125_11975916	Not Available	634	Open in IMG/M
3300010376\|Ga0126381_100138193	All Organisms → cellular organisms → Bacteria	3181	Open in IMG/M
3300010937\|Ga0137776_1021137	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300012212\|Ga0150985_102379872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	647	Open in IMG/M
3300012212\|Ga0150985_109105341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	624	Open in IMG/M
3300012359\|Ga0137385_10884685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300012923\|Ga0137359_10784792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300012924\|Ga0137413_11634158	Not Available	528	Open in IMG/M
3300012927\|Ga0137416_10844476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300012955\|Ga0164298_11071704	Not Available	601	Open in IMG/M
3300012955\|Ga0164298_11476079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300012971\|Ga0126369_11364638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300012985\|Ga0164308_10537128	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300014200\|Ga0181526_10711980	Not Available	633	Open in IMG/M
3300015262\|Ga0182007_10400229	Not Available	523	Open in IMG/M
3300016270\|Ga0182036_10073812	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300016270\|Ga0182036_10775180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300016270\|Ga0182036_10894357	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300016294\|Ga0182041_10740665	Not Available	874	Open in IMG/M
3300016294\|Ga0182041_11375220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300016294\|Ga0182041_11943388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300016319\|Ga0182033_11926539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300016357\|Ga0182032_10315259	All Organisms → cellular organisms → Bacteria → Proteobacteria	1240	Open in IMG/M
3300016357\|Ga0182032_10890769	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300016357\|Ga0182032_10938215	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300016371\|Ga0182034_10271944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1346	Open in IMG/M
3300016404\|Ga0182037_10772894	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300016445\|Ga0182038_10230820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1476	Open in IMG/M
3300020581\|Ga0210399_11515628	Not Available	520	Open in IMG/M
3300020582\|Ga0210395_10249986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1333	Open in IMG/M
3300020582\|Ga0210395_10822984	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300020582\|Ga0210395_11212391	Not Available	554	Open in IMG/M
3300021178\|Ga0210408_10134024	All Organisms → cellular organisms → Bacteria → Proteobacteria	1957	Open in IMG/M
3300021405\|Ga0210387_10143915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2034	Open in IMG/M
3300021420\|Ga0210394_10058370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3361	Open in IMG/M
3300021432\|Ga0210384_10490492	Not Available	1106	Open in IMG/M
3300021476\|Ga0187846_10000740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18574	Open in IMG/M
3300021476\|Ga0187846_10110646	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300021560\|Ga0126371_12258337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300022529\|Ga0242668_1142876	Not Available	521	Open in IMG/M
3300026095\|Ga0207676_11708520	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300027729\|Ga0209248_10016859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2288	Open in IMG/M
3300027767\|Ga0209655_10216439	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300027795\|Ga0209139_10070075	Not Available	1230	Open in IMG/M
3300030760\|Ga0265762_1060174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300031543\|Ga0318516_10717081	Not Available	567	Open in IMG/M
3300031544\|Ga0318534_10449616	Not Available	738	Open in IMG/M
3300031544\|Ga0318534_10868505	Not Available	506	Open in IMG/M
3300031545\|Ga0318541_10242652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1001	Open in IMG/M
3300031564\|Ga0318573_10748673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300031573\|Ga0310915_10745788	Not Available	690	Open in IMG/M
3300031573\|Ga0310915_11031450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031573\|Ga0310915_11077716	Not Available	559	Open in IMG/M
3300031573\|Ga0310915_11110338	Not Available	549	Open in IMG/M
3300031681\|Ga0318572_10493605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300031682\|Ga0318560_10068020	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300031708\|Ga0310686_102220306	Not Available	555	Open in IMG/M
3300031708\|Ga0310686_102388426	Not Available	814	Open in IMG/M
3300031708\|Ga0310686_106184295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1129	Open in IMG/M
3300031713\|Ga0318496_10341860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300031723\|Ga0318493_10815301	Not Available	526	Open in IMG/M
3300031724\|Ga0318500_10614937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031736\|Ga0318501_10166026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1143	Open in IMG/M
3300031753\|Ga0307477_10784093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. 'Peltigera membranacea cyanobiont' 232	634	Open in IMG/M
3300031753\|Ga0307477_10958346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300031765\|Ga0318554_10188201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1175	Open in IMG/M
3300031768\|Ga0318509_10798665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031771\|Ga0318546_10672571	Not Available	728	Open in IMG/M
3300031771\|Ga0318546_10810343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300031781\|Ga0318547_10366669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300031782\|Ga0318552_10646660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300031794\|Ga0318503_10285274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300031799\|Ga0318565_10496563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300031833\|Ga0310917_11122683	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300031845\|Ga0318511_10041145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1817	Open in IMG/M
3300031879\|Ga0306919_10071286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2367	Open in IMG/M
3300031879\|Ga0306919_10766536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300031890\|Ga0306925_11422178	Not Available	683	Open in IMG/M
3300031893\|Ga0318536_10576610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300031897\|Ga0318520_10830600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300031910\|Ga0306923_10603169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1232	Open in IMG/M
3300031912\|Ga0306921_11487918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300031945\|Ga0310913_10698859	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300031947\|Ga0310909_10203534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1646	Open in IMG/M
3300031947\|Ga0310909_10417770	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1126	Open in IMG/M
3300032001\|Ga0306922_10015720	All Organisms → cellular organisms → Bacteria → Proteobacteria	7469	Open in IMG/M
3300032025\|Ga0318507_10071843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1405	Open in IMG/M
3300032042\|Ga0318545_10243176	Not Available	646	Open in IMG/M
3300032043\|Ga0318556_10366249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	754	Open in IMG/M
3300032054\|Ga0318570_10239693	Not Available	822	Open in IMG/M
3300032054\|Ga0318570_10341307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300032091\|Ga0318577_10123601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1223	Open in IMG/M
3300032091\|Ga0318577_10490996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	585	Open in IMG/M
3300032261\|Ga0306920_101016438	Not Available	1206	Open in IMG/M
3300032896\|Ga0335075_10002350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30504	Open in IMG/M
3300032896\|Ga0335075_11010452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. RU38E	745	Open in IMG/M
3300033289\|Ga0310914_11209745	Not Available	657	Open in IMG/M
3300033290\|Ga0318519_10193075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1158	Open in IMG/M
3300033290\|Ga0318519_10797535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.87%
Host-Associated	Host-Associated	5.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	5.98%
Plants	Host-Associated → Plants	5.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.18%
Freshwater	Environmental → Aquatic → Freshwater	5.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Cave	Environmental → Terrestrial → Cave	1.71%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.13%
Loam	Environmental → Terrestrial → Soil → Loam	5.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077691

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1207038602	3300002568	Soil	DGRSMSADELAAALGKKPSGGHWNSGIAILRNNGLIEADPVSGAGRQYRLASLLRS*
JGIcombinedJ51221_100338931	3300003505	Forest Soil	AAMGKKPSGGHWNSGVAVLRNNGLIETDGRRYRCAALFRK*
Ga0063454_1014755891	3300004081	Soil	GKKPSGGHWNSGIAVLRNNGLIETESVAGAGRRYRLAVLLRS*
Ga0062387_1012252131	3300004091	Bog Forest Soil	VLGKKPSGGHWNSGIAVLRNNGLIEADGRRYRAATLLRE*
Ga0062389_1020650581	3300004092	Bog Forest Soil	MLRSLASEGERYMAADELAAALGKKPSGGHWNSGIAVLPNNGLIETDTAVAQAGGRRYRVAALLRE*
Ga0008090_156596512	3300005363	Tropical Rainforest Soil	DELAAALGKKPTGGHWNSGIAVLRNNGPIETDGRPYRTTALFRE*
Ga0070664_1014767851	3300005564	Corn Rhizosphere	SMSADELAVALGKKPSGGHWNSGIAILRNNGLIEADSGGGVGRRYRLAVLLRT*
Ga0070716_1001974101	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PSGGHWNSGIAILRNNGLIEADPGGGVGRRYRLAVLLRT*
Ga0070712_1007922182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GEAYMEADDLAAVLGKKPTGGHWNSGIAVLRNNGLIEADGRSYRAATLLRE*
Ga0070712_1012412152	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ELAAVLGKKPSGGHWNSGIAVLRNNGLIEVDGRRYRAATLFRE*
Ga0066665_110626891	3300006796	Soil	KPTGGHWNSGIAVLRNNGLIETDGRRYRTAALFRE*
Ga0066660_110568091	3300006800	Soil	YTDADELEAALGKKPTGGHWNSGIAMLRNNGLIEADGRRYRTAALFRE*
Ga0079220_121491551	3300006806	Agricultural Soil	NRPMSADELAAALGKKPSGGHWNSGIATLRNNCLIEADPIAGAGRCYRLAVLLRS*
Ga0099793_106957291	3300007258	Vadose Zone Soil	PTGGHWNSGIAVLRNNGLIETDGRRYRTAALFRE*
Ga0066710_1041572182	3300009012	Grasslands Soil	LAAQRETYMDADELAAALGKKPTGGHWNSGIAVLRNNGLIETDGRRYRTAAPFRE
Ga0105249_110000202	3300009553	Switchgrass Rhizosphere	VAASPPLPSPALEMLRTLAAQGERFMDADAPAAVLGKKPSGGHWHAGIGLLRHNGLIEADGRRYSASTLLRDAA*
Ga0126374_114277681	3300009792	Tropical Forest Soil	TVLGKKPSGGHWNAGIALLRNNGLIEADGRRYRASALLRDAA*
Ga0126373_109464241	3300010048	Tropical Forest Soil	MDIIELADMLGKKPTGGHWNSGIAVLRNNGLIEIDGRRYRAAALFRGDS*
Ga0134125_119759161	3300010371	Terrestrial Soil	ELAVALGKKATGGHWNSGVALLRNNGLVEMSGKRLRVAALFR*
Ga0126381_1001381935	3300010376	Tropical Forest Soil	MDADELAAALGKKPSGGHWNSGIAVLRNNGLIEADERRYRTAPLFRE*
Ga0137776_10211372	3300010937	Sediment	LAKALGKKPSGGHWNSGIAILRNNGLIETDPTGTPGGKRYRAAALFRNQQ*
Ga0150985_1023798722	3300012212	Avena Fatua Rhizosphere	MSADELAAALGKKPSGGHWNSGIAILRNNGLIEADPVSGAGRQYRLASLLRS*
Ga0150985_1091053412	3300012212	Avena Fatua Rhizosphere	HWNSGIAVLRNNGLIETESVAGAGRRYRLAVLLRS*
Ga0137385_108846852	3300012359	Vadose Zone Soil	MEAEELAAALGKKPSGGHWNSGIAVLRNNGLIETDGRRYRIAVLFLE*
Ga0137359_107847921	3300012923	Vadose Zone Soil	GKKPTGGHWNSGIAVLHNNGLIETDGRRYRTDALFRK*
Ga0137413_116341581	3300012924	Vadose Zone Soil	KKPSGGHWNSGIAVLRNNGLIETDGRRYRSAALFRK*
Ga0137416_108444762	3300012927	Vadose Zone Soil	APEMLRTLAARGGAYTDADELAAALGKKPTVGHWNSGIAVLRNNGLIETDGRRYRTAALFRE*
Ga0164298_110717041	3300012955	Soil	WNSGIAILRNNGLIEAEPGGGVGRRYRLAFLLRT*
Ga0164298_114760792	3300012955	Soil	MDAVELAAVLGKKPSGGHWNSGVAVLRNNGLIETDGRRYRSAALFRK*
Ga0126369_113646382	3300012971	Tropical Forest Soil	ELASMLGKKPSGEHWNSGIAVLRNNGLIETDGRRYRSAILFRE*
Ga0164308_105371282	3300012985	Soil	GHWNSGIAILRNNGLIEADPGGGVGRRYRLAVLLRT*
Ga0181526_107119801	3300014200	Bog	GEQYTETDDLAAALGKKATGGHWNSGIAVLRNNGLIEVDGRRLRATSLLRRASSHGE*
Ga0182007_104002291	3300015262	Rhizosphere	AVLGKKPSGGHWNSGMAILRNNGLIEADPVSGAGRRYRLAVLLRS*
Ga0182036_100738121	3300016270	Soil	GKKPSGGHWNSGIAVLRNNALIETDGRYYRAANLFRE
Ga0182036_107751801	3300016270	Soil	MLRTLAAQGERYMDADELAAILGKKPSGGYWNSGIAVLRNNGLIEIDGRRYRAAGLFRE
Ga0182036_108943571	3300016270	Soil	KPSGGHWNSGIAVLRNNGLIETDGRRYRTPPLFRE
Ga0182041_107406652	3300016294	Soil	MLGKKPSGGHWNSDLAILRNNGLIETDGRRYRAANLFRD
Ga0182041_113752202	3300016294	Soil	LGKKPSGGHWNSGIAVLRNNGLVETDGRRYRTASLFRE
Ga0182041_119433882	3300016294	Soil	ELAEILGKKPSGGHWNSGIAVLRNNGLIETDGRCYRAADLFRD
Ga0182033_119265392	3300016319	Soil	GARDAADARCARQDELAAILNKKPSGGHWNSGIAVLRNNGLIETDGRCYRAADLFRD
Ga0182032_103152591	3300016357	Soil	MLRTLAAQGEYFMDADEFAAALGKKPTGGHWNSGIAVLCNDGLIETDGRPYRTTTLFRE
Ga0182032_108907692	3300016357	Soil	AILGKKPSGGHWNSGIAVLRNNGLIETEGRRYRPASLFRE
Ga0182032_109382151	3300016357	Soil	KPSGGHWNSGIAVLRNNGLIETDGRRYRPADLFRE
Ga0182034_102719444	3300016371	Soil	RYMDADELAAALGKKPSGGHWNSGIAVLRNNGLIETDGRRYRTPPLFRE
Ga0182037_107728942	3300016404	Soil	LGKKPSGGHWNSGIAVLRNNALIETDGRCYRAANLFRE
Ga0182038_102308203	3300016445	Soil	ILGKKPSGGHWNSGIAVLRNNRLIETEGRSYRAGDLFRDRFLDLGNR
Ga0210399_115156281	3300020581	Soil	MDAAELAVVLGKKPSGGHWNSRVAVLRNNGFIETDGRRYRSAALFRK
Ga0210395_102499864	3300020582	Soil	AVEGERYMEADELAGALGKKPTGGHWNSGIAVLRNNGLIETDEGSAQRSRRYRAAPLLRG
Ga0210395_108229842	3300020582	Soil	AQGERYIGAEELAAAMGKKPSGGHWNSGVAVLRNNGLIETDGRRYRSAALFRK
Ga0210395_112123912	3300020582	Soil	SSRMDLPHWNSGIAVLRNNGLIETDGRRYRTAALFRE
Ga0210408_101340244	3300021178	Soil	MAAALGKKPSGEHWNSGIAVLRNNGLIETEPGSKRYRVTALFRE
Ga0210387_101439153	3300021405	Soil	AAAMGKKPSGGHWNSGVAVLRNNGLIETDGRRYRCAALFRK
Ga0210394_100583703	3300021420	Soil	MLGKRPIGGHRNSGIAGRRNNGLIEAAPATTAFGGKRYRAAAFLRELRQR
Ga0210384_104904922	3300021432	Soil	MLRTLAAHGARYIDADELAVMLGKKPSGGHWNSGIAMLRSNGLIETDGRRYRAADLFRDRENVD
Ga0187846_1000074010	3300021476	Biofilm	MDADELAATLGKKPTGGNWNSGVLRNNGLIETDGRRYRTAPLFRE
Ga0187846_101106463	3300021476	Biofilm	MDADELAAALRKKPTGGHWNSGIAVLPNNGLIETDCRRYRTTTLFRE
Ga0126371_122583371	3300021560	Tropical Forest Soil	MLGKKPSGGHWNSGIAVLRNNGLIETDGRRYRAADLFRE
Ga0242668_11428761	3300022529	Soil	MPGNWRGPLGKKPTGGHWNSGIAILRNNGLLIEAETAVETPRSKRYRAAALFRN
Ga0207676_117085201	3300026095	Switchgrass Rhizosphere	LAVQGERSLSVDELAGALGKKPSGGHWNSGIAVLRNNGLIETEPVAGAGRRYRLAVLLRS
Ga0209248_100168591	3300027729	Bog Forest Soil	HGRRRAAAVLGKKPTGGHWNSGIAVLRNNGLIETEPAPDQMGASAIVAALFRE
Ga0209655_102164391	3300027767	Bog Forest Soil	DADELAAVLSKKPSGGHWNSGMAVLRNNGLIETEPSSVQGSRRYRAAALFRE
Ga0209139_100700751	3300027795	Bog Forest Soil	TGGHWNSGIAILRNNGLIDTDPAVATPGSKRYRAAALFRN
Ga0265762_10601741	3300030760	Soil	TTELAEAIGKKPTGGHWNSGIALLRNNGLVEVSGKRLRVSELFR
Ga0318516_107170811	3300031543	Soil	LAAILGKKPSGGHWNSGIAVLRNNALIETDGRYYRAANLFRE
Ga0318534_104496161	3300031544	Soil	NELAAILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRPLRNTAPLVARLGRA
Ga0318534_108685051	3300031544	Soil	KKPSGGHWNSGLAILRNNGLIETDGRRYRAANLFRD
Ga0318541_102426524	3300031545	Soil	YMDADELAAALGKKPSGGHWNSGIAVLRNNGLIETDGRRYRTAPLFRE
Ga0318573_107486732	3300031564	Soil	AQGDRYMDADELAAALGKKPSGGHWNSGIAVLRNNGLIETDGRRYRTAPLFRE
Ga0310915_107457881	3300031573	Soil	MDAGELATMLGKKPSGGHWNSDLAILRNNGLIETDGRRYRAANLFRD
Ga0310915_110314501	3300031573	Soil	EMLRTLAAQGERYMDADELAAILGKKPSGGYWNSGIAVLRNNGLIEIDGRRYRAAGLFRE
Ga0310915_110777162	3300031573	Soil	LNKKPSGGHWNSGIAVLRNNGLIETDGRCYRAADLFRD
Ga0310915_111103382	3300031573	Soil	AILGKKPSGGHWNSGIAMLRNNGLIETDGRRYRAANLLRE
Ga0318572_104936052	3300031681	Soil	GKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0318560_100680201	3300031682	Soil	ERYIDPNELAVMLGKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0310686_1022203061	3300031708	Soil	MLGKKPSGGHWNSGIAVLRDNGLIETDGRCYRAADLFRAARARL
Ga0310686_1023884261	3300031708	Soil	SGGHWNSGIAVLRNNGLIETEPAVGQAGGRRYRTAVLFRE
Ga0310686_1061842953	3300031708	Soil	GGHWNSGIAVLRNNGLIETDEGSAQRSRRYRAAPLLRG
Ga0318496_103418603	3300031713	Soil	MNADELAAILGKKPSGGHWNSGIAVLRNNGLIENDGRRYRPASLFRE
Ga0318493_108153011	3300031723	Soil	LVAQGERYIDADELAAILGKKPSGGHWNSGIAVLRNNRLIETEGRSYRAGDLFRDRFLDLGNR
Ga0318500_106149371	3300031724	Soil	QGDRYMDADELAAALGKKPSGGHWNSGIAVLRNNGLIETDGRRYRTAPLFRE
Ga0318501_101660261	3300031736	Soil	AVMLGKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0307477_107840932	3300031753	Hardwood Forest Soil	LAAALGKKPSGGHWNSGIAVLRNNGLIETEPGSKRYRVAALFRE
Ga0307477_109583461	3300031753	Hardwood Forest Soil	MLRTLTTQGERCIDAEELAATLGKKPSGGHWNSGIAVLRNNGLIEADGRRYRVAELFRK
Ga0318554_101882013	3300031765	Soil	YIDADELAAILGKKPSGGHWNSGIAVLRNNRLIETEGRSYRAGDLFRDRFLDLGNR
Ga0318509_107986651	3300031768	Soil	VQGERYIHADELAEILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRAADLFRD
Ga0318546_106725712	3300031771	Soil	ERYIDANELAAILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRPLRNTAPLVARLGRA
Ga0318546_108103431	3300031771	Soil	YMDADELAAILGKKPSGGHWNSGIAVLRNNGLVETDGRRYRTASLFRE
Ga0318547_103666692	3300031781	Soil	ILGKKPSGGHWNSGIAVLRNNGLIENDGRRYRPASLFRE
Ga0318552_106466601	3300031782	Soil	DELAAILGKKPSGGHWNSGIAVLRNNGLIENDGRRYRPASLFRE
Ga0318503_102852741	3300031794	Soil	YMEADELATILGKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0318565_104965631	3300031799	Soil	APNELAVILGKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0310917_111226831	3300031833	Soil	ELAAILGKKPSGGHWNSGIAVLRNNGLIETEGRRYRPASLFRE
Ga0318511_100411451	3300031845	Soil	MLRTLAAQGEHFMDADELAAALGKKPTGGHWNSGIAVLCNNGLIETDGRPYRTTTLFRE
Ga0306919_100712862	3300031879	Soil	MDAGELATMLGKKPSGGHWNSGLAILRNNGLIETDGRRYRAANLFRD
Ga0306919_107665361	3300031879	Soil	RDMDADELAAILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRVAGLFRE
Ga0306925_114221782	3300031890	Soil	MLGKKPSGGHWNSGLAILRNNGLIETDGRRYRAANLFRD
Ga0318536_105766101	3300031893	Soil	YIDANELAAILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRPLRNTAPLVARLGRA
Ga0318520_108306001	3300031897	Soil	NELAVILGKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0306923_106031692	3300031910	Soil	MDADELAAILGKKPSGGYWNSGIAVLRNNGLIEIDGRRYRAAGLFRE
Ga0306921_114879182	3300031912	Soil	MLRTLAAQGEYFMDADEFAAALGKKPTGGHWNSGIAVLCNNGLIETDGRPYRTTTLFRE
Ga0310913_106988591	3300031945	Soil	KPSGGHWNSGIAVLRNNGLIEIDGRRYRPASLFRE
Ga0310909_102035343	3300031947	Soil	ADELAAILGKKPSGGYWNSGIAVLRNNGLIEIDGRRYRAAGLFRE
Ga0310909_104177701	3300031947	Soil	DELAAILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRPADLFRE
Ga0306922_1001572012	3300032001	Soil	RPEAPNELAVILGKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0318507_100718433	3300032025	Soil	MLRTLAAQGEYFMDADEFAAALGKKPTGGHWNSGIAVLCNNGLIETDGRPYRTKTLFRE
Ga0318545_102431761	3300032042	Soil	MPMSSRPHSAEKPIGGHWNSGIVVLRNNGLIETDGRRYRTAALFRE
Ga0318556_103662491	3300032043	Soil	ALGKKPSGGHWNSGIAVLRNNGLIETDGRRYRTPPLFRE
Ga0318570_102396931	3300032054	Soil	AVILGKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0318570_103413072	3300032054	Soil	GYMDAGELATMLGKKPSGGHWNSDLAILRNNGLIETDGRRYRAANLFRD
Ga0318577_101236011	3300032091	Soil	LAVILGKKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0318577_104909961	3300032091	Soil	RYIDANELAAILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRPLRNTAPLVARLGRA
Ga0306920_1010164381	3300032261	Soil	AAILGKKPSGGHWNSGIAVLRNNGLIETDGRRYRPLRNTAPLVARLGRA
Ga0335075_1000235017	3300032896	Soil	MTADELAATLGKKPTGGHWNAGLAVLRNNGLIEVSGRRIRAAELFR
Ga0335075_110104521	3300032896	Soil	PTGGQWNSGIAILRNNGLIETEPAAGTPGSKRYRAATLFRN
Ga0310914_112097452	3300033289	Soil	LEMLRTLAAQGEHFMDADELAAALGKKPTGGHWNSGIAVLCNDGLIETDGRPYRTTTLFR
Ga0318519_101930753	3300033290	Soil	KKPSGGHWNSGIAVLRNNGLIEAEGRSYRAADLFRD
Ga0318519_107975351	3300033290	Soil	GKKPSGGHWNSGIAVLRNNGLIETDGRRYRAADLFRD

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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