Metagenome Family F077681

Basic Information
Family ID	F077681
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	45 residues
Representative Sequence	ESMITGFHERFNPQGIKNRDAKPYLDPSFVQKAVERLKLGKK
Number of Associated Samples	105
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.53 %
% of genes near scaffold ends (potentially truncated)	82.05 %
% of genes from short scaffolds (< 2000 bps)	88.03 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Bacteria (99.145 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.675 % of family members)
Environment Ontology (ENVO)	Unclassified (31.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.462 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 0.00% Coil/Unstructured: 80.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF09084	NMT1	9.40
PF07690	MFS_1	6.84
PF13379	NMT1_2	5.98
PF00924	MS_channel	5.13
PF07883	Cupin_2	3.42
PF00330	Aconitase	2.56
PF00753	Lactamase_B	2.56
PF13439	Glyco_transf_4	1.71
PF07995	GSDH	1.71
PF00483	NTP_transferase	0.85
PF00857	Isochorismatase	0.85
PF01613	Flavin_Reduct	0.85
PF02776	TPP_enzyme_N	0.85
PF00890	FAD_binding_2	0.85
PF02457	DAC	0.85
PF02696	SelO	0.85
PF00903	Glyoxalase	0.85
PF02775	TPP_enzyme_C	0.85
PF05378	Hydant_A_N	0.85
PF00196	GerE	0.85
PF03401	TctC	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	9.40
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	9.40
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	5.13
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	5.13
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.71
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.71
COG0397	Protein adenylyltransferase (AMPylase) SelO/YdiU (selenoprotein O)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.85
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.85
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	53.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	53.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → environmental samples	0.85 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.85 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	44.44 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.71 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	0.85 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.85 %
uncultured Verrucomicrobiota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → environmental samples → uncultured Verrucomicrobiota bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	44.44 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.71 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.85 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	0.85 %
uncultured Verrucomicrobiota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → environmental samples → uncultured Verrucomicrobiota bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	44.44 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	1.71 %
Marinobacter algicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter algicola	0.85 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	0.85 %
uncultured Verrucomicrobiota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → environmental samples → uncultured Verrucomicrobiota bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	44.44 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1.71 %
Marinobacter algicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter algicola	0.85 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	0.85 %
uncultured Verrucomicrobiota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → environmental samples → uncultured Verrucomicrobiota bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %
Unclassified	root	N/A	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101352175	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300000559\|F14TC_100086558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10001997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter algicola	5349	Open in IMG/M
3300000955\|JGI1027J12803_100945773	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300000955\|JGI1027J12803_103447326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	758	Open in IMG/M
3300001372\|YBBDRAFT_1016730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	816	Open in IMG/M
3300003996\|Ga0055467_10028704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1315	Open in IMG/M
3300003999\|Ga0055469_10021704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1480	Open in IMG/M
3300004051\|Ga0055492_10010624	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300004633\|Ga0066395_10281493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	903	Open in IMG/M
3300005181\|Ga0066678_10687294	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005328\|Ga0070676_11366746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300005332\|Ga0066388_103351550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	818	Open in IMG/M
3300005366\|Ga0070659_101595346	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300005518\|Ga0070699_100420884	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300005719\|Ga0068861_100425609	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300005764\|Ga0066903_100512992	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2037	Open in IMG/M
3300005764\|Ga0066903_105447602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300005873\|Ga0075287_1005076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1562	Open in IMG/M
3300005875\|Ga0075293_1017480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300005876\|Ga0075300_1068437	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005885\|Ga0075284_1052809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300005895\|Ga0075277_1073160	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005937\|Ga0081455_10172166	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1648	Open in IMG/M
3300006173\|Ga0070716_100514263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	886	Open in IMG/M
3300006844\|Ga0075428_101824364	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006845\|Ga0075421_102515833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300006846\|Ga0075430_101589790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300006854\|Ga0075425_101040597	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300006871\|Ga0075434_102073038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	574	Open in IMG/M
3300006894\|Ga0079215_10001177	All Organisms → cellular organisms → Bacteria	6617	Open in IMG/M
3300006904\|Ga0075424_100902596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	943	Open in IMG/M
3300006969\|Ga0075419_10313568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1060	Open in IMG/M
3300007004\|Ga0079218_10840865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	890	Open in IMG/M
3300007076\|Ga0075435_100929758	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300007076\|Ga0075435_101616672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300009100\|Ga0075418_11761600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300009100\|Ga0075418_13058759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300009147\|Ga0114129_12313313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300009156\|Ga0111538_13109302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300009174\|Ga0105241_11738272	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300010043\|Ga0126380_11732981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300010360\|Ga0126372_10803573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	932	Open in IMG/M
3300010360\|Ga0126372_11537788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300010397\|Ga0134124_12977153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300010400\|Ga0134122_10937424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	842	Open in IMG/M
3300010403\|Ga0134123_10806832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	933	Open in IMG/M
3300011406\|Ga0137454_1073712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300011419\|Ga0137446_1121224	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300011422\|Ga0137425_1130465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300011427\|Ga0137448_1004789	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300011431\|Ga0137438_1253227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300011436\|Ga0137458_1102164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	825	Open in IMG/M
3300011445\|Ga0137427_10176285	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300012189\|Ga0137388_11431426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300012201\|Ga0137365_11176738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	549	Open in IMG/M
3300012354\|Ga0137366_11031101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	570	Open in IMG/M
3300012358\|Ga0137368_10062900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	3055	Open in IMG/M
3300012685\|Ga0137397_10092644	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300012922\|Ga0137394_10949646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	716	Open in IMG/M
3300012930\|Ga0137407_11347974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → environmental samples → uncultured Verrucomicrobiota bacterium	678	Open in IMG/M
3300012944\|Ga0137410_10908642	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300012944\|Ga0137410_11221021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	648	Open in IMG/M
3300012986\|Ga0164304_10403323	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300013297\|Ga0157378_10719688	Not Available	1019	Open in IMG/M
3300014271\|Ga0075326_1037188	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300014301\|Ga0075323_1002906	All Organisms → cellular organisms → Bacteria	2502	Open in IMG/M
3300014866\|Ga0180090_1101362	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300014878\|Ga0180065_1158403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	521	Open in IMG/M
3300015373\|Ga0132257_100914285	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300015373\|Ga0132257_104637734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300015374\|Ga0132255_105071286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300016387\|Ga0182040_10231946	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300016404\|Ga0182037_11008757	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300016422\|Ga0182039_11965273	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300018072\|Ga0184635_10064340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1427	Open in IMG/M
3300018072\|Ga0184635_10252947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	697	Open in IMG/M
3300018074\|Ga0184640_10052824	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300018082\|Ga0184639_10245102	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300018432\|Ga0190275_10733682	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300019377\|Ga0190264_11015875	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300020186\|Ga0163153_10012768	All Organisms → cellular organisms → Bacteria	7782	Open in IMG/M
3300020186\|Ga0163153_10057157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2598	Open in IMG/M
3300021081\|Ga0210379_10270998	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	739	Open in IMG/M
3300022756\|Ga0222622_10062440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2157	Open in IMG/M
3300022756\|Ga0222622_10662624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	756	Open in IMG/M
3300025159\|Ga0209619_10021738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	4237	Open in IMG/M
3300025792\|Ga0210143_1072905	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300025907\|Ga0207645_10907161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300025917\|Ga0207660_10219835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1490	Open in IMG/M
3300025919\|Ga0207657_10023607	All Organisms → cellular organisms → Bacteria	5722	Open in IMG/M
3300025922\|Ga0207646_11811482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300025923\|Ga0207681_11090407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300025939\|Ga0207665_11574716	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300025992\|Ga0208775_1001073	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300025993\|Ga0208415_1005898	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300026003\|Ga0208284_1025382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300026020\|Ga0208531_1014528	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300026053\|Ga0208422_1046941	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026095\|Ga0207676_12563990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300027326\|Ga0209731_1056315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300027637\|Ga0209818_1051738	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300027731\|Ga0209592_1213225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300027907\|Ga0207428_10660723	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300027909\|Ga0209382_10038434	All Organisms → cellular organisms → Bacteria	5742	Open in IMG/M
3300027909\|Ga0209382_10183867	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300028814\|Ga0307302_10406918	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300028884\|Ga0307308_10497968	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1078928	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300031720\|Ga0307469_11109248	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300032174\|Ga0307470_10371056	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300032180\|Ga0307471_100291381	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300032180\|Ga0307471_100709776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1170	Open in IMG/M
3300033419\|Ga0316601_100549384	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1116	Open in IMG/M
3300034165\|Ga0364942_0234827	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300034177\|Ga0364932_0183124	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300034354\|Ga0364943_0143113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	858	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.21%
Host-Associated	Host-Associated	24.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.70%
Plants	Host-Associated → Plants	24.79%
Aquatic	Environmental → Aquatic	20.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.66%
Sediment	Environmental → Aquatic → Sediment	12.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.13%
Marine	Environmental → Aquatic → Marine	4.27%
Freshwater	Environmental → Aquatic → Freshwater	3.42%
Floodplain	Environmental → Terrestrial → Floodplain	2.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.27%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.71%
Lake	Environmental → Aquatic → Freshwater → Lake	1.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.85%
Sand	Environmental → Terrestrial → Soil → Sand	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.71%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.56%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.85%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004051	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025992	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 (SPAdes)	Environmental	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026003	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026020	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)	Environmental	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077681

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1013521751	3300000364	Soil	FHERFNPQGIKNRDAKPYLDPSFVQKAAERLKLDKK*
F14TC_1000865582	3300000559	Soil	TGFHERFNPQGIKNRDASAALDASFVQKAAERLKFGKK*
AF_2010_repII_A1DRAFT_100019973	3300000597	Forest Soil	MRFNPQGIRNRDAKLYLDPSFVQKAAERLKLDKK*
JGI1027J12803_1009457732	3300000955	Soil	IEGMITGFHERFNPQGIKNRDAKPYLDPSFVQKAAERLKLDKK*
JGI1027J12803_1034473262	3300000955	Soil	IEGMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLDKSRQ*
YBBDRAFT_10167301	3300001372	Marine Estuarine	FHERFNPQGIKNRDASGSLDPSFVQKAAERLKLGKK*
Ga0055467_100287042	3300003996	Natural And Restored Wetlands	VSTPWEAGFESMITGFYERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK*
Ga0055469_100217042	3300003999	Natural And Restored Wetlands	VSTPWEAGFESMITGFHERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK*
Ga0055492_100106241	3300004051	Natural And Restored Wetlands	LPWQAGIESMITGFHERFNPQGIKNRDASAALDAGFVQKAAERLKLGKK*
Ga0066395_102814931	3300004633	Tropical Forest Soil	WEAGIESMITGFHERFNPQGIKNHDPKPFLDPSFVQKAVERLKLGKK*
Ga0066678_106872942	3300005181	Soil	FPWQSGIEGMITGFHERFNPQGIKNRDAKPYLDPSFVQKAAERLKLDKK*
Ga0070676_113667461	3300005328	Miscanthus Rhizosphere	GIEGMITGFHERFNPQGIKNRDARPYLDPYFVQKAAERLRLDKK*
Ga0066388_1033515502	3300005332	Tropical Forest Soil	GIESMITGFHERFNPQGIKNHDPKPFLDPSFVQKAVERLKLGKK*
Ga0070659_1015953461	3300005366	Corn Rhizosphere	EAGIESMITGFHERFNPQGIRNRDAKAFIDASFVQKAAERLKLGGTNRP*
Ga0070699_1004208841	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EGMITGFHERFNPQGIRNRDAKPYLDPSFVQKAAERLKLDKK*
Ga0068861_1004256091	3300005719	Switchgrass Rhizosphere	DAIGGIPIPWEAGIESMITGFHERFNPQGIKNRDAKPYLDPTFVQKAVERLKLGKK*
Ga0066903_1005129921	3300005764	Tropical Forest Soil	ESMINGYHARFTPAVVKNRDARPFLDASFVQRAVERAGIGKKP*
Ga0066903_1054476022	3300005764	Tropical Forest Soil	EAGIESMISGFHERFNPQGIKNHDPKPFLDPSFVQKAVERLKLGKK*
Ga0075287_10050762	3300005873	Rice Paddy Soil	VSTPREAGFESMITGFYERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK*
Ga0075293_10174802	3300005875	Rice Paddy Soil	VSTPREAGFESMITGFYERFNPQGIKNRDAEPYLDPSFVQKALERLKLGKK*
Ga0075300_10684371	3300005876	Rice Paddy Soil	ESMITGFHERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK*
Ga0075284_10528091	3300005885	Rice Paddy Soil	IDGLPYPWEAGIEQMITGFHRRFNPQIVKNTDVKPYLDSTFVRTAAERLGLSKK*
Ga0075277_10731602	3300005895	Rice Paddy Soil	FYERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK*
Ga0081455_101721663	3300005937	Tabebuia Heterophylla Rhizosphere	FHERFNPQGIKNHDATPFLDPSFVQKAVERLKLSKK*
Ga0070716_1005142632	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MITGFHERFNPQGIRNRDAKPYLDPSFVQKAAERLKLDKK*
Ga0075428_1018243642	3300006844	Populus Rhizosphere	GIESMITGFHERFNPQGIKNHDAKPFLDPSFVQKAVERLKLGKK*
Ga0075421_1025158331	3300006845	Populus Rhizosphere	MISGFHERFNPQGIKNRDARSYLDPSFVQKAAERLRLDKK*
Ga0075430_1015897902	3300006846	Populus Rhizosphere	VRWEAGIESMITGFHERFNPQGIKNRDAKSFLDASFVQKAVERLKLGKK*
Ga0075425_1010405973	3300006854	Populus Rhizosphere	HERFTPQGIRNRDAKAFIDASFVQKAAERLKLGGTNRP*
Ga0075434_1020730381	3300006871	Populus Rhizosphere	GIEGMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLDKSRQ*
Ga0079215_100011775	3300006894	Agricultural Soil	LPWQAGIESMITGFHERFNPQGIKNRDARPFLDPSFVQRAVERLKLGKK*
Ga0075424_1009025961	3300006904	Populus Rhizosphere	WEAGIESMITGFHERFNPQGIRNRDAKGFVDPSFVQRAAERLKLGRSNRP*
Ga0075419_103135682	3300006969	Populus Rhizosphere	EAGIESMITGFHERFNPQGIKNHDAKPFLDPSFVQKAVERLKLGKK*
Ga0079218_108408652	3300007004	Agricultural Soil	MITGFRERFNPQGIKNRDARPFLDPSFVQKAAERLKLGKK*
Ga0075435_1009297581	3300007076	Populus Rhizosphere	GFHERFNPQGIRNRDAKPYLDPSFVQKAAERLKLDKK*
Ga0075435_1016166722	3300007076	Populus Rhizosphere	GVPVRWEAGIESMITGFHERFNPQGIKNRDAKSFLDASFVQKAVERLKLGKK*
Ga0075418_117616001	3300009100	Populus Rhizosphere	RFNPQGIRNRDAKGSIDASFVQRAAERLKLQKSKP*
Ga0075418_130587591	3300009100	Populus Rhizosphere	IEGMITGFHERFNPQGIKNRDAKPFLDPSFVQKAAERLKLDKK*
Ga0114129_123133132	3300009147	Populus Rhizosphere	MITGFHERFNPQGIKNRDAKSFLDASFVQKAVERLKLGKK*
Ga0111538_131093022	3300009156	Populus Rhizosphere	MITGFHERFNPQGIKNREAKPYLDPSFVQKAVERLKLGKK*
Ga0105241_117382721	3300009174	Corn Rhizosphere	ITGFHERFNPQGTRNRDAKAFIDASFVQKAAERLKLERTNRP*
Ga0126380_117329812	3300010043	Tropical Forest Soil	ERFNPQGIKNHDPKPFLDPSFVQKAVERLKLGKK*
Ga0126372_108035732	3300010360	Tropical Forest Soil	FHERFNPQGIKNHDPKPFLDPSFVQKAVERLKLGKK*
Ga0126372_115377882	3300010360	Tropical Forest Soil	VCRFQEAGIESMITGFHERFNPQGIKNRNAKPFIDPSFVQRAAERLKLVKSDRS*
Ga0134124_129771531	3300010397	Terrestrial Soil	WEAGIESMITGFHERFNPQGIRNRDAKAFIDASFVQKAAERLKLGGTNRP*
Ga0134122_109374241	3300010400	Terrestrial Soil	AGIESMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLERK*
Ga0134123_108068322	3300010403	Terrestrial Soil	FHERFNPQGIRNRDAKAFIDASFVQKAAERLKLGRTNRP*
Ga0137454_10737122	3300011406	Soil	MLENEYGSLPWQAGIESMITGFHERFNPQGIKNRDASSSLDASFVQKAAERLKLGKK*
Ga0137446_11212242	3300011419	Soil	GIEGMITGFHERFNPQGIKNRDARPFLDSSFVQKAAERLKLDKK*
Ga0137425_11304651	3300011422	Soil	NGFHARFTPALIKNRDARPYLDPSFVQRAVERLGLVKK*
Ga0137448_10047891	3300011427	Soil	GLPFPWQAGIEGMITGFHERFNPQGIKNRDARPFLDSSFVQKAAERLKLDKK*
Ga0137438_12532271	3300011431	Soil	GGLPFPWQAGIEGMITGFHERFNPQGIKNHDAKPFLDPSFVQRAAERLKLDRK*
Ga0137458_11021641	3300011436	Soil	GLPFPWQAGIEGMITGFHERFNPQGIKNRDARPYLDSSFVQKAAERLRLDKK*
Ga0137427_101762853	3300011445	Soil	PWQAGIEGMITGFHERFNPQGIKNRDAKPYLDSSFVQKAAERLKLDKK*
Ga0137388_114314261	3300012189	Vadose Zone Soil	GYHARFTPAVVKNRDARPFLDPSFVQRAVDRLGLSRKQ*
Ga0137365_111767382	3300012201	Vadose Zone Soil	GGLPFPWQSVIEGMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLDKSRQ*
Ga0137366_110311012	3300012354	Vadose Zone Soil	QSGIEGMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLDKSRQ*
Ga0137368_100629003	3300012358	Vadose Zone Soil	WEAGIESMISGFHERFNPQGIKNHDAKPFLDPSFVQKAVERLKLGKK*
Ga0137397_100926441	3300012685	Vadose Zone Soil	TGFHERFSPQGIKNRDAKPYLDPSFVQKAVERLKLGKK*
Ga0137394_109496462	3300012922	Vadose Zone Soil	GGLPFPWQSGIEGMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLDKSRQ*
Ga0137407_113479741	3300012930	Vadose Zone Soil	PWEAGIESMITGFHERFNPQGIKNRDAKPYLDPTFVQKAVERLKLGKK*
Ga0137410_109086422	3300012944	Vadose Zone Soil	HERFNPQGIKNRDAKPYLDPSFVQKAVERLKLGKK*
Ga0137410_112210211	3300012944	Vadose Zone Soil	EGIESMINGFHGRFSPTVVKNRDARPYLDPSFVQRAVERLGLAKK*
Ga0164304_104033232	3300012986	Soil	GGIPIPWEAGIESMITGFHERFSPQGIKNRDAKPYLDPTFVQKAVERLKLGKK*
Ga0157378_107196881	3300013297	Miscanthus Rhizosphere	RFNPQGTRNRDAKAFIDASFVQKAAERLKLGRTDRP*
Ga0075326_10371883	3300014271	Natural And Restored Wetlands	ESMITGFHERFNPQGVKNRDAKPYLDPSFVQNAVERLKLNKK*
Ga0075323_10029062	3300014301	Natural And Restored Wetlands	VSTPWEAGFESMITRFYERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK*
Ga0180090_11013622	3300014866	Soil	PFPWQEGIESMINGFHARFTPALVKNRDARPYLDPSFVQRAVDRLGLAKK*
Ga0180065_11584032	3300014878	Soil	MLENENGPLPWQAGIEGMITGLHERVNPQGIENRDASASLDGSFVQK
Ga0132257_1009142852	3300015373	Arabidopsis Rhizosphere	IESMITGFHERFNPQGIKNREAKPYLDPSFVQKAVERLKLGRK*
Ga0132257_1046377341	3300015373	Arabidopsis Rhizosphere	IESMITGFHERFNPQGIKNRDAKPYLDPSFVQKAVEQLKLGKK*
Ga0132255_1050712862	3300015374	Arabidopsis Rhizosphere	GIPIPWEAGIESMITGFHERFNPQGIKNRDAKPYLDPSFVQKAVERLKLGKK*
Ga0182040_102319462	3300016387	Soil	QSGIEGMITGFHERFNPQGIKNHDAKPYLDPSFVQRAAERLKLDKK
Ga0182037_110087572	3300016404	Soil	FHERFNPQGIKNRDAKPYLDPSFVQKAAERLKLDKK
Ga0182039_119652732	3300016422	Soil	GFHERFNPQGIKNRDAKPYLDPSFVQKAAERLKLDKK
Ga0184635_100643401	3300018072	Groundwater Sediment	EGMITGFHERFNPQGIKNRDARPYLDPFFVQKAAERLKLNKSRQ
Ga0184635_102529471	3300018072	Groundwater Sediment	FPWQSGIEGMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLDKGRQ
Ga0184640_100528242	3300018074	Groundwater Sediment	MITGFHERFNPQGIKNRDARPYLDSSFVQKAAERLKLDKK
Ga0184639_102451022	3300018082	Groundwater Sediment	FHERFNPQGIKNRDARAYLDSSFVQRAAERLKLDKK
Ga0190275_107336822	3300018432	Soil	FGIESMITGFHERFNPQGIKNREAKAFVGPTFVQKATERLKLSGK
Ga0190264_110158751	3300019377	Soil	MITGFHERFNPQGIKNRDAKPFLDPSFVQKAVERLKLKK
Ga0163153_100127682	3300020186	Freshwater Microbial Mat	MITGFHERFNPHGIKNRDAWASLDASFVQKTAERLKLKK
Ga0163153_100571574	3300020186	Freshwater Microbial Mat	MITGFHERFNPQGIKNRDASASLDASFVQKAAERLKLGKR
Ga0210379_102709982	3300021081	Groundwater Sediment	PWQSGIEGMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLDKSRR
Ga0222622_100624401	3300022756	Groundwater Sediment	ISGFHERFNPLGIKNRDAKPFLDPSFVQKAVERLKLSQK
Ga0222622_106626242	3300022756	Groundwater Sediment	GLPFPWQSGIEGMITGFHERFNPQGIKNRDARPYLDPSFVQKAAERLKLDKSRQ
Ga0209619_100217381	3300025159	Soil	ITGFHERFNPQGIKNRDAKPFLDSSFVQRAGERLKLSGK
Ga0210143_10729051	3300025792	Natural And Restored Wetlands	VSTPWEAGFESMITGFHERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK
Ga0207645_109071612	3300025907	Miscanthus Rhizosphere	GIEGMITGFHERFNPQGIKNRDARPYLDPYFVQKAAERLRLDKK
Ga0207660_102198353	3300025917	Corn Rhizosphere	ERFNPQGIRNRDAKAFIDASFVQKAAERLKLGGTNRP
Ga0207657_100236071	3300025919	Corn Rhizosphere	AGIESMITGFHERFNPQGIRNRDAKAFIDASFVQKAAERLKLGGTNRP
Ga0207646_118114821	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TGFHERFNPQGIKNRDARPYLDPSFVQKAAERLRIDKK
Ga0207681_110904071	3300025923	Switchgrass Rhizosphere	ITGFHGRFNPQGIRNRDAKAFIDASFVQKAAERLKLGGTNRP
Ga0207665_115747161	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MITGFHERFNPQGIRNRDAKPYLDPSFVQKAAERLKLDKK
Ga0208775_10010732	3300025992	Rice Paddy Soil	VSTPWEAGFESMITGFYERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK
Ga0208415_10058982	3300025993	Rice Paddy Soil	MITGFYERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK
Ga0208284_10253822	3300026003	Rice Paddy Soil	VSTPREAGFESMITGFYERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK
Ga0208531_10145281	3300026020	Rice Paddy Soil	IGGVSTPWEAGFESMITGFYERFNPQGIKNRDAKPYLDPSFVQKALERLKLGKK
Ga0208422_10469411	3300026053	Natural And Restored Wetlands	GFHERFNPQGIRNHDAKPFLDPSFVQKAVERLKLGKK
Ga0207676_125639902	3300026095	Switchgrass Rhizosphere	GFHERFNPQGIRNRDAKAFIDASFVQKAAERLKLGGTNRP
Ga0209731_10563151	3300027326	Forest Soil	GFHERFNPQGIKNRDAKPYLDPSFVQKAVERLKLGKK
Ga0209818_10517381	3300027637	Agricultural Soil	AGIESMITGFHERFNPQGIKNRDAKAFLDPSFVQKAAERLKLGKK
Ga0209592_12132252	3300027731	Freshwater Sediment	MITGCHERFNPQGIKNRDASASLDSSFVQKAAERLKLGKM
Ga0207428_106607231	3300027907	Populus Rhizosphere	GVPIPWEAGIESMITGFHERFNPQGIKNRDVKPYLDPSFVQKAVERLKLGKK
Ga0209382_100384341	3300027909	Populus Rhizosphere	GIESMITGFHERFNPQGIKNRDVKPYLDPSFVQKAVERLKLGKK
Ga0209382_101838671	3300027909	Populus Rhizosphere	MISGFHERFNPQGIKNRDARSYLDPSFVQKAAERLRLDKK
Ga0307302_104069182	3300028814	Soil	IESMITGFHERFNPLGIKNRDAKPFLDPSFVQKAVERLKLSQK
Ga0307308_104979682	3300028884	Soil	IGGVPLPWEAGIESMITGFHERFNPQGIKNRDAKPFIDPSFVQKAVERLKLGKK
(restricted) Ga0255311_10789282	3300031150	Sandy Soil	TGFHERFNPQGIKNRDARPYLDSSFVQKAAERLKLERK
Ga0307469_111092481	3300031720	Hardwood Forest Soil	ESMITGFHERFNPQGIKNRDAKPYLDPSFVQKAVERLKLGKK
Ga0307470_103710561	3300032174	Hardwood Forest Soil	GLPFPWQSGIEGMITGFHERFNPQGIRNRDAKPYLDPSFVQKAAERLKLDKK
Ga0307471_1002913813	3300032180	Hardwood Forest Soil	FPWQSGIEGMITGFHERFNPQGIKNRDAKPYLDPSFVQKAAERLKLDKK
Ga0307471_1007097761	3300032180	Hardwood Forest Soil	MINGYHARFTPAVVKNRDARPFLDPSFVQRAVERLGIGKKQ
Ga0316601_1005493842	3300033419	Soil	MITGFHERFNPQGIKNRDASAALDPSFVQKAAERLKLGKK
Ga0364942_0234827_422_598	3300034165	Sediment	QYDAINGLPFPWQAGIEGMITGFHERFNPQGIKNRDAKPYLDSSFVQKAAERLKLDKK
Ga0364932_0183124_2_139	3300034177	Sediment	AGIEGMITDFHERFNPQGIKNRDAKPYLDSSFVQKAAERLKLDKK
Ga0364943_0143113_746_856	3300034354	Sediment	FHARFNPQGIKNHDAKPFLDPSFVQKAVERLKLGKK

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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