Metagenome / Metatranscriptome Family F077676

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077676
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	64 residues
Representative Sequence	MESASLLTQSDWQRALTKDQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCD
Number of Associated Samples	105
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.14 %
% of genes near scaffold ends (potentially truncated)	97.44 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.744 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.607 % of family members)
Environment Ontology (ENVO)	Unclassified (35.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.137 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.35% β-sheet: 0.00% Coil/Unstructured: 54.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF02012	BNR	6.84
PF04909	Amidohydro_2	4.27
PF15902	Sortilin-Vps10	3.42
PF00092	VWA	0.85
PF05199	GMC_oxred_C	0.85
PF13360	PQQ_2	0.85
PF05448	AXE1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.85
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.85
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.74 %
Unclassified	root	N/A	10.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.74 %
Unclassified	root	N/A	10.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.74 %
Unclassified	root	N/A	10.26 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.81 %
Unclassified	root	N/A	10.26 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.80 %
Unclassified	root	N/A	10.26 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Unclassified	root	N/A	10.26 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.98 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Unclassified	root	N/A	10.26 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.98 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Unclassified	root	N/A	10.26 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.85 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Unclassified	root	N/A	10.26 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.85 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Unclassified	root	N/A	10.26 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.85 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10664403	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300002911\|JGI25390J43892_10012326	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300002915\|JGI25387J43893_1007139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1496	Open in IMG/M
3300004479\|Ga0062595_101786021	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005166\|Ga0066674_10398114	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005167\|Ga0066672_10853950	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005174\|Ga0066680_10527182	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300005175\|Ga0066673_10414394	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005176\|Ga0066679_10199485	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300005177\|Ga0066690_10174158	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300005181\|Ga0066678_10685141	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005186\|Ga0066676_11032607	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005447\|Ga0066689_10593137	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005450\|Ga0066682_10381220	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005454\|Ga0066687_10241017	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300005540\|Ga0066697_10405660	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005554\|Ga0066661_10435730	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005555\|Ga0066692_10077117	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300005557\|Ga0066704_10028638	All Organisms → cellular organisms → Bacteria	3374	Open in IMG/M
3300005558\|Ga0066698_10441455	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005566\|Ga0066693_10000375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8082	Open in IMG/M
3300005569\|Ga0066705_10571279	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005574\|Ga0066694_10459924	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300005576\|Ga0066708_10690739	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005713\|Ga0066905_101260996	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300006032\|Ga0066696_10687825	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300006173\|Ga0070716_100601164	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300006796\|Ga0066665_10055085	All Organisms → cellular organisms → Bacteria	2758	Open in IMG/M
3300006796\|Ga0066665_10508070	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300006914\|Ga0075436_101425020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	525	Open in IMG/M
3300007258\|Ga0099793_10049487	Not Available	1849	Open in IMG/M
3300007258\|Ga0099793_10512743	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300007265\|Ga0099794_10125044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300007788\|Ga0099795_10659311	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300009012\|Ga0066710_100006440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10962	Open in IMG/M
3300009038\|Ga0099829_10889068	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300009088\|Ga0099830_10939817	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300009143\|Ga0099792_10029499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2529	Open in IMG/M
3300009792\|Ga0126374_10240244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300010046\|Ga0126384_12345483	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300010048\|Ga0126373_10051383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3665	Open in IMG/M
3300010303\|Ga0134082_10012252	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3101	Open in IMG/M
3300010320\|Ga0134109_10139320	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300010323\|Ga0134086_10235899	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300010337\|Ga0134062_10115900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300010360\|Ga0126372_11775852	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300010361\|Ga0126378_10673097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300010361\|Ga0126378_11314375	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300010376\|Ga0126381_103107771	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300010865\|Ga0126346_1235610	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300012096\|Ga0137389_10043864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	3337	Open in IMG/M
3300012189\|Ga0137388_11423892	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300012200\|Ga0137382_10917981	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300012203\|Ga0137399_11735021	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300012205\|Ga0137362_10256983	Not Available	1509	Open in IMG/M
3300012209\|Ga0137379_10428844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300012210\|Ga0137378_10467102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300012211\|Ga0137377_11424153	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300012285\|Ga0137370_10829947	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300012351\|Ga0137386_10751326	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300012351\|Ga0137386_10937582	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300012354\|Ga0137366_10513735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300012357\|Ga0137384_10785175	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300012357\|Ga0137384_11060550	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300012362\|Ga0137361_10560898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300012362\|Ga0137361_11582589	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300012582\|Ga0137358_10169183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1490	Open in IMG/M
3300012683\|Ga0137398_10344697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300012918\|Ga0137396_10772444	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300012918\|Ga0137396_11131404	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300012923\|Ga0137359_10170137	Not Available	1945	Open in IMG/M
3300012923\|Ga0137359_11348889	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300012923\|Ga0137359_11682036	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300012925\|Ga0137419_10151829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1673	Open in IMG/M
3300012927\|Ga0137416_11579302	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300012927\|Ga0137416_11786869	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300012948\|Ga0126375_11711359	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300012971\|Ga0126369_10222750	Not Available	1837	Open in IMG/M
3300014157\|Ga0134078_10005270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3552	Open in IMG/M
3300014166\|Ga0134079_10297063	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300015051\|Ga0137414_1112644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1193	Open in IMG/M
3300015051\|Ga0137414_1152762	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300015054\|Ga0137420_1313713	All Organisms → cellular organisms → Bacteria → Acidobacteria	1633	Open in IMG/M
3300015241\|Ga0137418_11185629	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300015245\|Ga0137409_10003416	All Organisms → cellular organisms → Bacteria	16839	Open in IMG/M
3300015264\|Ga0137403_11618055	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300016357\|Ga0182032_10775417	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300017654\|Ga0134069_1367560	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300017656\|Ga0134112_10428381	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300019882\|Ga0193713_1016424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2210	Open in IMG/M
3300020170\|Ga0179594_10203878	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300020581\|Ga0210399_10650441	Not Available	869	Open in IMG/M
3300021086\|Ga0179596_10360238	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300021170\|Ga0210400_10120191	Not Available	2096	Open in IMG/M
3300021178\|Ga0210408_11062791	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300021411\|Ga0193709_1078207	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300021420\|Ga0210394_11125029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300024271\|Ga0224564_1112613	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300024330\|Ga0137417_1150571	Not Available	1870	Open in IMG/M
3300025928\|Ga0207700_11231941	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300026301\|Ga0209238_1241523	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300026305\|Ga0209688_1005918	Not Available	2222	Open in IMG/M
3300026314\|Ga0209268_1090087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300026316\|Ga0209155_1029625	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2226	Open in IMG/M
3300026319\|Ga0209647_1092073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1467	Open in IMG/M
3300026331\|Ga0209267_1270387	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300026355\|Ga0257149_1016489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300026548\|Ga0209161_10051580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2687	Open in IMG/M
3300027882\|Ga0209590_10677944	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300027903\|Ga0209488_10206581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1479	Open in IMG/M
3300030743\|Ga0265461_11454614	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300031720\|Ga0307469_10093862	Not Available	2082	Open in IMG/M
3300031736\|Ga0318501_10233725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300031880\|Ga0318544_10034890	Not Available	1766	Open in IMG/M
3300032180\|Ga0307471_100230352	Not Available	1886	Open in IMG/M
3300032180\|Ga0307471_103468130	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.29%
Host-Associated	Host-Associated	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.29%
Plants	Host-Associated → Plants	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.16%
Loam	Environmental → Terrestrial → Soil → Loam	5.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_106644032	3300001593	Forest Soil	MEASLLTQSDWQRALTKNQASAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCDRM
JGI25390J43892_100123262	3300002911	Grasslands Soil	MESASLLNQADWEHGLTNGQARAAELFGRAETEQKRLGYFHTLKEICQQPWTWLRTCDRMIASRDSLKKDVAGIRSLALTGS
JGI25387J43893_10071391	3300002915	Grasslands Soil	MESASLLTQADWQRALTNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWLRTA
Ga0062595_1017860212	3300004479	Soil	MDSSSLLTQSEWQQTLAESHGKAALLFGRPKAEQERLGYFHTLREICQQPWTWLRTCEQMIAA
Ga0066674_103981142	3300005166	Soil	MESASLLNQADWEHGLTNGQARAAELFGRPETEQKRLGYFHTLKEICQQPWTWL
Ga0066672_108539501	3300005167	Soil	MESASLLTQSDWQRALTKDQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCDRMIALRDGLRKDVAGIR
Ga0066680_105271822	3300005174	Soil	MESASLSNQADWQRALTNDQARAAELFGRPETEQKRLGYFHTLKEICQQPWTWLRTCDRMIAS
Ga0066673_104143942	3300005175	Soil	MESASLLTQADWQRAMTNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWLQTADRMIAARDSLRKDVAGIRSLALTG
Ga0066679_101994851	3300005176	Soil	MESASLLTQADWQRALTNDQARAAELFGRPETEQKRLGYFHTLQEICQQPWTWL
Ga0066690_101741581	3300005177	Soil	MSSVPVVSQAEWQLALTSGQTKAAQLFGKSEAEQRHLGYFHTLREICQQPWTWL
Ga0066678_106851412	3300005181	Soil	MNRASLLTQADWQRALTNDQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCDRMMASRERLR
Ga0066676_110326072	3300005186	Soil	MESVSLLNQADWQRALTNDQARAAELFGRPDAEQKRLGYFHTLKEICQQPWTWLRTCDRMIA
Ga0066689_105931372	3300005447	Soil	MESASLLNQADWEHGLTNGQARAAELFGRPEAEQKRLGYFHTLKEICQQPWTW
Ga0066682_103812202	3300005450	Soil	MESASLLTQADWQRALMNQQARAAEFFARSEAEQKRLGYFHTLQEICQQPWTWLQTADRMIAARDSLRK
Ga0066687_102410172	3300005454	Soil	MDGAHLLTQDQWQHALAKSQTKAAELFGHSEEEQRRLGYFHTIREICQQPWTWLGTGDRMLASRDGLKEDLK
Ga0066697_104056601	3300005540	Soil	MDGTQLLTQAEWQRALAKEQARAAELFERPEAEQRRLGYFHTLQEICQQPWTWLRT
Ga0066661_104357302	3300005554	Soil	MDGAHLLTQDQWQHALAKSQTKAAELFGHSEEEQRRLGYFHTIREICQQPWTWLGTGDRMLASRDGLKEDLKGIHSLALT
Ga0066692_100771172	3300005555	Soil	MNRASLLTQADWQRALTNDQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCDRMMASRERLRQH
Ga0066704_100286381	3300005557	Soil	MESASLLTQADWQRALINQQARAAEFFGRSEAEQKRLGYFHTLQEICQQPWTWL
Ga0066698_104414552	3300005558	Soil	MESASLSNQADWQRALTNDRARAAELFGRPETEQKRLGYFHTLKEICQQPWTWLRTCDRMIASRDSLK
Ga0066693_100003751	3300005566	Soil	MESASLLTQADWQRAMTNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWLRTADRMIAARDSLRKDVAGIR
Ga0066705_105712791	3300005569	Soil	MSSVPVVSQAEWQLTLTNSQARAAQLFGKSEAEQRHLGYFHTLREICQQPWTW
Ga0066694_104599241	3300005574	Soil	MSSVPVVSQAEWQLTLTDSQARAAQLFGRPEAEQRHLGYFHTLGEICQQPWTWLR
Ga0066708_106907392	3300005576	Soil	MESASLLTQSDWQRALTKNQASAAELFGRPEAQQKRLGYFHTLREICQQPWTWLRTCDRMIALRDGLRKDVAGIRSLA
Ga0066905_1012609962	3300005713	Tropical Forest Soil	MDSSSLLTQSQWQQTLTGRHGKAALLFGRPEAEQKKLGYFHTLREICQQPWTWLRT
Ga0066696_106878252	3300006032	Soil	MDDAHSLMQDEWQRALAKDQAKATELFGHSEEELRRLGYFHTIREICQQPWTWLRTCDRMLDSRDGLNEDL
Ga0070716_1006011641	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MESASLLTQADWQRALTSSQAKAAALFSRSEAEQTRLGYVHTLREICQQPWTWLRTCERMIA
Ga0066665_100550851	3300006796	Soil	MESASLLTQSDWQRALTKNQASAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCDRMIAL
Ga0066665_105080702	3300006796	Soil	MESASLSNQADWQRALTNDRARAAELFGRPETEQKRLGYFHTLKEICQQPWTWLRTCDRMIAS
Ga0075426_111538871	3300006903	Populus Rhizosphere	MDSSASTSQARWQVALAQSQSNAAELFGRTEADQKRLGYFHTLREICQQPWTWLRTCDRMIASRENLKQIMEG
Ga0075436_1014250201	3300006914	Populus Rhizosphere	MTQADWQRALVKEQARAAELFGRPEAEQKHLGYFHTLHEICQQPWTWLRTCERMIASRDELRGDLQGIQSLALTGSG
Ga0099793_100494871	3300007258	Vadose Zone Soil	MNRASLLTQADWQRALTNDQARAAELFGRPEGEQKRLGYFHTLREICQQPWTWLRTCDRMMASRER
Ga0099793_105127431	3300007258	Vadose Zone Soil	MDRMVSLTQADWQRALTNQQARASLLFGRTDAEQKRLGYFHTLREICQQPWTWLRTCERMVASS
Ga0099794_101250441	3300007265	Vadose Zone Soil	MNRASLLTQADWQRALTNDQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRS
Ga0099795_106593111	3300007788	Vadose Zone Soil	MESASLLTQSEWQRALTKNQAKAAELFGRPEAEQQRLGYFHTLREICQQPWTWLRTCERMVASSDSL
Ga0066710_1000064401	3300009012	Grasslands Soil	MESGSMLTPAEWQRALTNGQARAAELFGRPEREQKQLGYFHTLKEICQQPWTWLRTCDRLIASRDGLKQDVAGIRSLALTGS
Ga0099829_108890682	3300009038	Vadose Zone Soil	MESGSLLTQAGWQRALTNDQAQAAELFGRPETEQKRLGYFHTLKEICQQPWTWLRTCDRMIASRDGLRKDVAGIRSLAL
Ga0099830_109398171	3300009088	Vadose Zone Soil	MESASLLTQSEWQRALTKNQARAAELFGRPEAEQQRLGYFHTLREICQQPWTWLGTCD
Ga0099792_100294993	3300009143	Vadose Zone Soil	MESASLLTQSEWQRALTKNQAKAAELFGRPEAEQQRLGYFHTLREICQQPWTWLSTCDRM
Ga0126374_102402441	3300009792	Tropical Forest Soil	MESAHLLTPEEWQRALATTQGRAAELFGRSEEEQQRLGYFHTIREICQQPWTW
Ga0126384_123454831	3300010046	Tropical Forest Soil	MDSSSLLTQSEWQQALAGSQEKAALLFGRPEAEQKKLGYFHTLREICQQPW
Ga0126373_100513833	3300010048	Tropical Forest Soil	MDAAHLLTQDEWQRALARDQGKAAALFGRSEEEQQRLGYFHTIREICQQPWIWLKTCDRMLASRD
Ga0134082_100122523	3300010303	Grasslands Soil	MDDTQLLTQNEWQRTLARDQAKAGELFGHSEEEQQRLGYFHTIREICQQPWTWLQTRDRMLASRDRLKEDLKGIH
Ga0134109_101393202	3300010320	Grasslands Soil	MESASSLTQADWQRALTNGQARAAELFGRPETEQKRLGYVHTLKEICQQPWTWLRTCDRMIASRDNLKKEVAGIRSL
Ga0134086_102358992	3300010323	Grasslands Soil	MESASLLTQADWQRAMTNQQARAAELFGRPETEQKRLGYFHTLKEICQQPWTWLRTCDRMIASR
Ga0134062_101159002	3300010337	Grasslands Soil	MESASLLTQADWQRAMTNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWL
Ga0126372_117758521	3300010360	Tropical Forest Soil	MDPSSLLTQSEWLQTLARSHGKAALLFGRPEAEQRRLGYFHTLREICQQPWTWLRTCEQMIASGAQLVEHLDGVKN
Ga0126378_106730972	3300010361	Tropical Forest Soil	MDSSSLLTQSEWQQTLTGSHGKAALLFGRPEAEQKKLGYFHTLREICQQPWTWLRT
Ga0126378_113143752	3300010361	Tropical Forest Soil	MESAHLLTPEEWQRALAKTQGRAAELFGRSEEEQRRLGYFHTIREICQQPWTWLRTCERMLAS
Ga0126381_1031077711	3300010376	Tropical Forest Soil	LPQAAKDFMDSSSLLTQSEWQQTLTGSHGKAALLFGRPEAEQKKLGYFHTLREICQQPWTWLRTS
Ga0126346_12356102	3300010865	Boreal Forest Soil	MESASLLTQADWQRALTNEQLRAAQIFGRPEAEQKRLGYFHTLQEICQQPWTWPRTCDRMIASRDGLRVDMA
Ga0137389_100438643	3300012096	Vadose Zone Soil	MDSTHLLTQADWQRALVKEQARAAELFERPEGEQRRLGYFHTLREICQQPW
Ga0137388_114238922	3300012189	Vadose Zone Soil	MESASLLTQSEWQRALTKNQASAAELFGRPEAEQKRLGYFHTLREICQQPWTWLR
Ga0137382_109179812	3300012200	Vadose Zone Soil	MSSVPVVSQAEWQLTLTDSQARAAQLFGRPEAEQRHLGYFHTLKEICQQPWTWL
Ga0137399_117350212	3300012203	Vadose Zone Soil	MESALSLTQLDWQRALRNEQARAAELFGRPEAEQKRLGYFHTLQEICQQPWTWLRTCDRMIALRDG
Ga0137362_102569832	3300012205	Vadose Zone Soil	MDLASSLTQIDWQRALTNQQARASLLFGRTDAEQERLGYFHTLREICQQPWTWLRTCERMVASS
Ga0137379_104288442	3300012209	Vadose Zone Soil	MDDAHSLMQDEWQRALAKDQAKATELFGHSEEEQRRLGYFHTIREICQQPWTWLRTCDRMLDSRDGLNED
Ga0137378_104671022	3300012210	Vadose Zone Soil	MDGAHLLTQNEWQRALEKSQGKAAELFERPEEEQRRLGYFHTIREICQQPWTWLRT
Ga0137377_114241531	3300012211	Vadose Zone Soil	MESASLLTQSDWQRALTKDQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCDRMIALRDGLRKDVA
Ga0137370_108299471	3300012285	Vadose Zone Soil	MESASLLTQADWQRALRNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWLQTA
Ga0137386_107513261	3300012351	Vadose Zone Soil	MESASLLTQADWRRALTIDQARAAELFGRLETEQKRLGYFHTLREICQQPWTWLRTCDRMIAFRD
Ga0137386_109375822	3300012351	Vadose Zone Soil	VESASLLTQADWQRALTNDQARAAELFGRSESEQKRLGYFHTLKEICQQPWTWLRTCE
Ga0137366_105137352	3300012354	Vadose Zone Soil	MDSSASISQAHWQVALAQYQSNAEELFGRTEADQKRLGYFHTLREICQQPWTWLQTSERMIASRENLIQIIKDMRSVTLTGSG
Ga0137384_107851751	3300012357	Vadose Zone Soil	MESASLLTQADWRRALTIDQARAAELFGRLETEQKRLGYFHTLREICQQPWTW
Ga0137384_110605502	3300012357	Vadose Zone Soil	MESASLLTQAEWQRALTNEQARAAELFGRLETEQKRLGYFHTLREICQQPWTW
Ga0137361_105608982	3300012362	Vadose Zone Soil	MESASLLIQADWQRALTNDQARAAELFGRPETEQKRLGYFHTLKEICQQPWTWLQ
Ga0137361_115825891	3300012362	Vadose Zone Soil	MSSVPVVSQAEWQLTLTDSQARAAQLFGRPEAEQRHLGYFHTLREICQQPWTWLRTCDQM
Ga0137358_101691831	3300012582	Vadose Zone Soil	MEDVSLLTQADWQRALSSEQARAAELFGRPASEQKRLGYFHTLQEICQQPWTWLRTCD
Ga0137398_103446972	3300012683	Vadose Zone Soil	MESASLLTQVDWQRALTDGQARAAELFSRPKTEQKRLGYFHTLKEICQQPWTWLRTCDRMIASRDSLKKDVAGIRS
Ga0137396_107724441	3300012918	Vadose Zone Soil	MDRSVSLTQADWQRALTNQQARASLLFGRTDAEQKRLGYFHTLREICQQPWTWLRTCERMIASSDSLRRGLAGI
Ga0137396_111314041	3300012918	Vadose Zone Soil	MESASLLTQSDWQRALTKDQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCD
Ga0137359_101701371	3300012923	Vadose Zone Soil	MDSSASISQADWQVALAQYQSNAEELFGRTEADQERLGYFHTLREICQQPWTWLQTSERMIASRENLIQI
Ga0137359_113488892	3300012923	Vadose Zone Soil	MEDVSLLTQADWQRALSSEQARAAELFGRPASEQKRLGYFHTLQEICQQPWTWLRTCDRMIASR
Ga0137359_116820361	3300012923	Vadose Zone Soil	MDSSASISQAHWQVALAQYQSNAEELFGRTEADQKRLGYFHTLREICQQPWTWLQTSERMIASREN
Ga0137419_101518291	3300012925	Vadose Zone Soil	MESASLLTQVDWQRALTDGQARAAELFSRPKTEQKRLGYFHTLKEICQQPWTWLRTCERMIASSDSL
Ga0137416_115793021	3300012927	Vadose Zone Soil	MESASLLDQADWQRALTNGQARAAELFGRPEAEQKRLGYFHTLKEICQQPW
Ga0137416_117868692	3300012927	Vadose Zone Soil	MESASVLNQADWQRALTNGQARAAELFGRPETEQKRLGYFHTLKEICQQPWTWLRTCDRMIASRDGL
Ga0126375_117113591	3300012948	Tropical Forest Soil	MDSAHLLTQVDWQRALARDQVKAAEFFGRSEEEQQRLGYFHTLREISQQLRIWLHICDRMVA
Ga0126369_102227502	3300012971	Tropical Forest Soil	MDPSSLLTQSEWQQALASSQERAALLFGRPEAEQKKLGYFHTLREICQQPWTWLRTCEQMIASRARLEEHL
Ga0134078_100052701	3300014157	Grasslands Soil	MESASLLNQADWEHGLTNGQARAAELFGRPQTEQTQLGYFHTLKEICQQPWTWL
Ga0134079_102970632	3300014166	Grasslands Soil	MESASLLNQADWEHGLTNGQARAAELFGRPQTEQKQLGYFHTLKEICQQPWTWLRTCVRMIASRDSLKKDV
Ga0137414_11126442	3300015051	Vadose Zone Soil	MESASLLTQSDWQRALTKDQARAAELFERPEAEQKRLGYFHTLREICQQPWTWLRTCDRM
Ga0137414_11527621	3300015051	Vadose Zone Soil	MDLAPSLTQIDWQRALMNEQARASLLFGRTDAEQERLGYFHTLREICQQPWTWLRTCER
Ga0137420_13137132	3300015054	Vadose Zone Soil	MDRPVSLTQADWQRALTNQQARASILFGRTDAEQERLGYFHTLREICQQPWTWLRTCERMIASSDSP*
Ga0137418_111856292	3300015241	Vadose Zone Soil	MESASLLNQADWEHGLTNGQARAAELFSRAETEQKRLGYFHTLKEICQQPWTWLRTCDRMIASRDSLKKDVAGIRS
Ga0137409_100034161	3300015245	Vadose Zone Soil	MNRASLLTQADWQRALSSEQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRTCDRMMASRE
Ga0137403_116180551	3300015264	Vadose Zone Soil	MESVSLLNQADWQRALTNDQARAAELFGRPDAEQKRLGYFHTLKEICQQPWTWLRTCDRMIASRDGLKQDLAGIR
Ga0182032_107754172	3300016357	Soil	MESAHLLTPEEWQRALATTQGRAAELFGRSEEEQQRLGYFHTIREICQQPWTWLRTCER
Ga0134069_13675601	3300017654	Grasslands Soil	MSSVPVVSQAEWQLTLTDSQARAAELFGRPEAEQRHLGYFHTLREICQQPWTWLRTCDQMIASRD
Ga0134112_104283811	3300017656	Grasslands Soil	MNSTYLLTQLDWQRALVKDQARAEELFGRSEAEQRRLGYFHTLQEICQQPWTWQRTCERMIA
Ga0193713_10164241	3300019882	Soil	MDNSASASKADWQYTLAQRQAKAAELFGRSEAEQRRLGYFHTLHEICQQPWTWLRT
Ga0179594_102038782	3300020170	Vadose Zone Soil	MDRSVSLTQADWQRALTNQQARASLLFGRTDAEQKRLGYFHTLREICQQPWTWLRTCERM
Ga0210399_106504412	3300020581	Soil	MESTSLLTQADWQRALRNEQLRAAQLFGRPEAEQKRLGYFHTLQEICQQPWTWPRTCDRMIAS
Ga0179596_103602381	3300021086	Vadose Zone Soil	MESASLLTQADWQRALTNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWLQTADRMIAARDSLRKDVAGIRSL
Ga0210400_101201912	3300021170	Soil	MESAGSLTRADWQRALTNEQLRAAQIFGRPEAEQERLGYFHTLQEICQQPWPRPRT
Ga0210408_110627911	3300021178	Soil	MEKAPLLTQADWKRALTNDQARAAELFGRPEAEQLRLGYFHTLREICQQPWTWL
Ga0193709_10782071	3300021411	Soil	MDNSASASKADWQYTLAQRQAKAAELFGRSEAEQRRLGYFHTLHEICQQPWTWLRTCERMIESREALGSPL
Ga0210394_111250292	3300021420	Soil	MESASLLTQSEWQRALTKNQARAAELFGRPEAEQQRLGYFHTLREICQQPWTWLGTCDRMIALRDGLRKDVAGIRSLALTGS
Ga0224564_11126131	3300024271	Soil	MESASLLTQVDWLRALKNEQLRAAQVFGRPEAEQKRLGYFHTLQEICQQPWTWPRTCDRMIAS
Ga0137417_11505711	3300024330	Vadose Zone Soil	MESASLLTQSEWQRALTKNQARAAELFGRPEAEQQRLGYFHTLREICQQPWTWLGTCDRMIALQDGLRKDVAGIRSLKSRA
Ga0207700_112319412	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDRPVSLTQRDWQRALTNQQARASLLFGRSHAEQERLGYFHTLREICQQPWTWLRTCERMIASSDSLRQDLAEIRH
Ga0209238_12415232	3300026301	Grasslands Soil	MDSSASLLTQPDWQRALIADQPKAAKLFARSESEQKRLGYFHTLQEICQQPWTWL
Ga0209688_10059181	3300026305	Soil	MESASLLTQADWQRAMTNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWLRTADRMIAARDSLRKDVAGIRSLALTG
Ga0209268_10900872	3300026314	Soil	MESASLLNQADWEHGLTNGQARAAELFGRPETEQKRLGYFHTLKEICQQPWTWLRTCDRMIASRDSLKKDVEGIRSLALTGS
Ga0209155_10296251	3300026316	Soil	MESASLLTQADWQRAMTNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWLRTADRMIAAR
Ga0209647_10920732	3300026319	Grasslands Soil	MSSVPVVSQAEWQLTLTDSQASAAQLFGKSEAEQRHLGYFHTLSEICQQPWTWLRTCDQMIASHDSL
Ga0209267_12703872	3300026331	Soil	MDSAHLLTQADWQRALAKDQARAAELFERPEAEQRRLGYFHTLQEICQQPWTWLRT
Ga0257149_10164891	3300026355	Soil	MEDVSLLTQADWQRALSSEQARAAELFGRPASEQKRLGYFHTLQEICQQPWTWL
Ga0209161_100515801	3300026548	Soil	MESASLLTQADWQRALRNQQARAAEFFGRSETEQKRLGYFHTLQEICQQPWTWLQTADRMIAARDSLRK
Ga0209590_106779441	3300027882	Vadose Zone Soil	MESAYLLSQADWQRALTNGQARAAELFGQPETEQKRLGYYHTLKEICQQPWTWLRT
Ga0209488_102065812	3300027903	Vadose Zone Soil	MDRMVSLTQADWQRALTNQQARASLLFGRTDAEQKRLGYFHTLREICQQPWTWL
Ga0265461_114546141	3300030743	Soil	MESASLLTQVDWLRALKNDQLRAAQVFGRPEAEQKRLGYFHTLQEICQQPWTWPRTCDRMIASRERLRVDLAGIRSLGK
Ga0307469_100938622	3300031720	Hardwood Forest Soil	VHKPSGEKYKDPMEGASLLTQADWQRALANDQARAAELFGRPEAEQKRLGYFHTLREICQQPWTWLRT
Ga0318501_102337252	3300031736	Soil	MDSSSLLNQSEWQQTLAGSHGKAALLFGRPEAEQKKLGYFHTLREICQQPWTWLRTSEQMIAARDSLQE
Ga0318544_100348901	3300031880	Soil	MGGTHVLTQADWQRALVRDQAKAAELFGRSEEEQRRLGYFYTLQEICQQPW
Ga0307471_1002303521	3300032180	Hardwood Forest Soil	VSAAGKVEKHLMDSASLLAQEDWQRELTKNQPGAAELLGRPETEQKRLGYFHTLSEICQQPWTWLRTGEQMTAWR
Ga0307471_1034681301	3300032180	Hardwood Forest Soil	MDSASSLTQADWQRALTNQQARASELFGRSDAEQERLGYFHTLREISQQPWTWLRTCDRM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077676

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences