Metagenome / Metatranscriptome Family F077673

Basic Information
Family ID	F077673
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	44 residues
Representative Sequence	VPGKSGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPT
Number of Associated Samples	92
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.14 %
% of genes near scaffold ends (potentially truncated)	98.29 %
% of genes from short scaffolds (< 2000 bps)	79.49 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Bacteria (88.034 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.658 % of family members)
Environment Ontology (ENVO)	Unclassified (25.641 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.556 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.28% β-sheet: 0.00% Coil/Unstructured: 59.72%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01494	FAD_binding_3	3.42
PF01979	Amidohydro_1	3.42
PF07676	PD40	3.42
PF13620	CarboxypepD_reg	2.56
PF00583	Acetyltransf_1	1.71
PF02371	Transposase_20	1.71
PF00589	Phage_integrase	1.71
PF12704	MacB_PCD	1.71
PF01047	MarR	1.71
PF08308	PEGA	0.85
PF12833	HTH_18	0.85
PF00654	Voltage_CLC	0.85
PF13883	Pyrid_oxidase_2	0.85
PF00239	Resolvase	0.85
PF01551	Peptidase_M23	0.85
PF13650	Asp_protease_2	0.85
PF01799	Fer2_2	0.85
PF07638	Sigma70_ECF	0.85
PF01872	RibD_C	0.85
PF00069	Pkinase	0.85
PF01548	DEDD_Tnp_IS110	0.85
PF02861	Clp_N	0.85
PF03162	Y_phosphatase2	0.85
PF13231	PMT_2	0.85
PF01527	HTH_Tnp_1	0.85
PF01910	Thiamine_BP	0.85
PF01041	DegT_DnrJ_EryC1	0.85
PF00072	Response_reg	0.85
PF06877	RraB	0.85
PF13564	DoxX_2	0.85
PF01152	Bac_globin	0.85
PF03551	PadR	0.85
PF08281	Sigma70_r4_2	0.85
PF07228	SpoIIE	0.85
PF00903	Glyoxalase	0.85
PF00211	Guanylate_cyc	0.85
PF13646	HEAT_2	0.85
PF16576	HlyD_D23	0.85
PF13545	HTH_Crp_2	0.85
PF03544	TonB_C	0.85
PF13302	Acetyltransf_3	0.85
PF04191	PEMT	0.85
PF07238	PilZ	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	6.84
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	3.42
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	3.42
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.42
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.42
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.56
COG2365	Protein tyrosine/serine phosphatase Oca4	Signal transduction mechanisms [T]	0.85
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.85
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.85
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.85
COG3076	Regulator of RNase E activity RraB	Translation, ribosomal structure and biogenesis [J]	0.85
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.85
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.85
COG0011	Thiamin-binding stress-response protein YqgV, UPF0045 family	Coenzyme transport and metabolism [H]	0.85
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.85
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.85
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.85
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.85
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.03 %
Unclassified	root	N/A	11.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.03 %
Unclassified	root	N/A	11.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.03 %
Unclassified	root	N/A	11.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.39 %
Unclassified	root	N/A	11.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.56 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.03 %
Unclassified	root	N/A	11.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.27 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.32 %
Unclassified	root	N/A	11.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.27 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.71 %
Balneolaeota	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.32 %
Unclassified	root	N/A	11.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.42 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.71 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.85 %
Balneolia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia	0.85 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.32 %
Unclassified	root	N/A	11.97 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.71 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.85 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.85 %
Balneolales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales	0.85 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.85 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.85 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.32 %
Unclassified	root	N/A	11.97 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.71 %
Balneolaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae	0.85 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.85 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.85 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.85 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.85 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.32 %
Unclassified	root	N/A	11.97 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.71 %
Aliifodinibius	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius	0.85 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.85 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.85 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.85 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.85 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.32 %
Unclassified	root	N/A	11.97 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.71 %
Aliifodinibius roseus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius roseus	0.85 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.85 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.85 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.85 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.85 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10058970	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300001593\|JGI12635J15846_10102966	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300001593\|JGI12635J15846_10428037	Not Available	793	Open in IMG/M
3300001593\|JGI12635J15846_10448038	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300002914\|JGI25617J43924_10097950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1051	Open in IMG/M
3300004633\|Ga0066395_10338096	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300005332\|Ga0066388_106100960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300005434\|Ga0070709_10369809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1063	Open in IMG/M
3300005591\|Ga0070761_10421034	Not Available	817	Open in IMG/M
3300005610\|Ga0070763_10532866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300005993\|Ga0080027_10195854	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300006052\|Ga0075029_100134706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1508	Open in IMG/M
3300006162\|Ga0075030_100181811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1696	Open in IMG/M
3300006173\|Ga0070716_100622794	Not Available	815	Open in IMG/M
3300006174\|Ga0075014_100231688	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300006176\|Ga0070765_100266116	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300006854\|Ga0075425_100161909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2567	Open in IMG/M
3300006893\|Ga0073928_10156837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1829	Open in IMG/M
3300009524\|Ga0116225_1109125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279	Open in IMG/M
3300010341\|Ga0074045_10285151	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1085	Open in IMG/M
3300010361\|Ga0126378_12311525	Not Available	614	Open in IMG/M
3300010366\|Ga0126379_11729706	Not Available	730	Open in IMG/M
3300010379\|Ga0136449_100960280	All Organisms → cellular organisms → Bacteria → Acidobacteria	1382	Open in IMG/M
3300011269\|Ga0137392_11643758	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300011270\|Ga0137391_10640144	Not Available	888	Open in IMG/M
3300012189\|Ga0137388_10073394	All Organisms → cellular organisms → Bacteria → Acidobacteria	2859	Open in IMG/M
3300012201\|Ga0137365_10237966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300012201\|Ga0137365_10392164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300012202\|Ga0137363_11724172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300012203\|Ga0137399_10371959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300012207\|Ga0137381_10192653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1766	Open in IMG/M
3300012209\|Ga0137379_11258562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300012350\|Ga0137372_10640299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300012361\|Ga0137360_10493996	Not Available	1041	Open in IMG/M
3300012362\|Ga0137361_11571528	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012685\|Ga0137397_10124020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1904	Open in IMG/M
3300012685\|Ga0137397_10294301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300012923\|Ga0137359_10675574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300012923\|Ga0137359_10710081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	875	Open in IMG/M
3300012923\|Ga0137359_10937697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012923\|Ga0137359_11620646	Not Available	535	Open in IMG/M
3300012930\|Ga0137407_10291893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1489	Open in IMG/M
3300012944\|Ga0137410_10767163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300012971\|Ga0126369_10703891	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius roseus	1087	Open in IMG/M
3300012971\|Ga0126369_10782747	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300014489\|Ga0182018_10085452	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300014489\|Ga0182018_10200427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	1117	Open in IMG/M
3300014494\|Ga0182017_10428801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300014495\|Ga0182015_10098980	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2026	Open in IMG/M
3300014501\|Ga0182024_10319680	All Organisms → cellular organisms → Bacteria	2042	Open in IMG/M
3300014501\|Ga0182024_10410417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1749	Open in IMG/M
3300014501\|Ga0182024_10738125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300015051\|Ga0137414_1006263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300015264\|Ga0137403_10440279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1179	Open in IMG/M
3300015371\|Ga0132258_10803491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2372	Open in IMG/M
3300017934\|Ga0187803_10009368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3909	Open in IMG/M
3300017943\|Ga0187819_10773837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300017961\|Ga0187778_10940119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	596	Open in IMG/M
3300017970\|Ga0187783_10490859	All Organisms → cellular organisms → Bacteria → Proteobacteria	890	Open in IMG/M
3300018062\|Ga0187784_10509241	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300018088\|Ga0187771_10040880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3575	Open in IMG/M
3300018088\|Ga0187771_10550709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300019883\|Ga0193725_1103787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300020022\|Ga0193733_1101064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300020140\|Ga0179590_1089782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300020580\|Ga0210403_10005165	All Organisms → cellular organisms → Bacteria → Acidobacteria	11131	Open in IMG/M
3300020580\|Ga0210403_10007964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8758	Open in IMG/M
3300020583\|Ga0210401_10337870	Not Available	1367	Open in IMG/M
3300020583\|Ga0210401_10895947	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300021046\|Ga0215015_10148558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300021171\|Ga0210405_10264439	Not Available	1360	Open in IMG/M
3300021401\|Ga0210393_10032798	All Organisms → cellular organisms → Bacteria	4061	Open in IMG/M
3300021403\|Ga0210397_10015160	All Organisms → cellular organisms → Bacteria → Acidobacteria	4679	Open in IMG/M
3300021405\|Ga0210387_10863476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300021406\|Ga0210386_11065366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300021407\|Ga0210383_10035460	All Organisms → cellular organisms → Bacteria	4165	Open in IMG/M
3300021407\|Ga0210383_10090417	All Organisms → cellular organisms → Bacteria → Acidobacteria	2571	Open in IMG/M
3300021407\|Ga0210383_10179587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1806	Open in IMG/M
3300021432\|Ga0210384_11866949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300021474\|Ga0210390_10061190	All Organisms → cellular organisms → Bacteria	3103	Open in IMG/M
3300021478\|Ga0210402_10289090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1516	Open in IMG/M
3300021479\|Ga0210410_11081436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300021559\|Ga0210409_10028149	All Organisms → cellular organisms → Bacteria → Acidobacteria	5420	Open in IMG/M
3300021559\|Ga0210409_10203072	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300021559\|Ga0210409_10206205	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300021559\|Ga0210409_11211460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300025906\|Ga0207699_10514560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	865	Open in IMG/M
3300026341\|Ga0257151_1008513	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300026551\|Ga0209648_10410683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	878	Open in IMG/M
3300027070\|Ga0208365_1038373	Not Available	637	Open in IMG/M
3300027590\|Ga0209116_1001232	All Organisms → cellular organisms → Bacteria → Acidobacteria	6357	Open in IMG/M
3300027645\|Ga0209117_1002280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6675	Open in IMG/M
3300027676\|Ga0209333_1060339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300027701\|Ga0209447_10090161	Not Available	842	Open in IMG/M
3300027874\|Ga0209465_10061781	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300027911\|Ga0209698_10192454	All Organisms → cellular organisms → Bacteria → Acidobacteria	1654	Open in IMG/M
3300028906\|Ga0308309_10543660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	1006	Open in IMG/M
3300029636\|Ga0222749_10006755	All Organisms → cellular organisms → Bacteria → Acidobacteria	4671	Open in IMG/M
3300029943\|Ga0311340_10355852	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300029943\|Ga0311340_10745068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300031231\|Ga0170824_110509811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300031234\|Ga0302325_10497004	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300031573\|Ga0310915_10125641	All Organisms → cellular organisms → Bacteria → Acidobacteria	1755	Open in IMG/M
3300031708\|Ga0310686_114741348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2801	Open in IMG/M
3300031715\|Ga0307476_11059717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300031719\|Ga0306917_10696819	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300031754\|Ga0307475_10959016	Not Available	673	Open in IMG/M
3300032160\|Ga0311301_10148328	All Organisms → cellular organisms → Bacteria → Acidobacteria	4256	Open in IMG/M
3300032160\|Ga0311301_12169492	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300032180\|Ga0307471_100052513	All Organisms → cellular organisms → Bacteria	3374	Open in IMG/M
3300032180\|Ga0307471_101942367	Not Available	737	Open in IMG/M
3300032180\|Ga0307471_103107451	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300032180\|Ga0307471_103682297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300032782\|Ga0335082_11190287	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300033829\|Ga0334854_016819	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300033982\|Ga0371487_0000758	All Organisms → cellular organisms → Bacteria	47878	Open in IMG/M
3300034070\|Ga0334822_093040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.29%
Host-Associated	Host-Associated	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.45%
Aquatic	Environmental → Aquatic	6.84%
Plants	Host-Associated → Plants	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.32%
Peat	Environmental → Terrestrial → Peat	5.13%
Sediment	Environmental → Aquatic → Sediment	3.42%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.12%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.27%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.56%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034070	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077673

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100589706	3300001593	Forest Soil	MSGSRGGLNGSTQHFLAVYSQESENLKFVVGVDLSA
JGI12635J15846_101029663	3300001593	Forest Soil	VIRIRVPDKRGGLNGSTQHFLGVYSQESENLKFLVGVDLGA
JGI12635J15846_104280371	3300001593	Forest Soil	MSDNPGGLNGSTQHFLEVYSQESENLKSLVGVDSS
JGI12635J15846_104480381	3300001593	Forest Soil	MSGKAGGLNGSTQHFLGVYSQESENLKFLVGVDLSAALLCSDPTGNSRLGL
JGI25617J43924_100979501	3300002914	Grasslands Soil	MTASTQMSDYLGGLNGWTQQLLEVYSRESENLRFFSGVDSSAVQ
Ga0066395_103380962	3300004633	Tropical Forest Soil	MPGKSGGLSRSTQHFLEVYSQESENLEFVVGVDLSAALLCSDPTGN
Ga0066388_1061009602	3300005332	Tropical Forest Soil	MSGNPGGLKGSPQHFVEVYSQESENPKFVVGVDLDAALLCSNPTGSSRL
Ga0070709_103698092	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VPDNSGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDLTG
Ga0070761_104210341	3300005591	Soil	MATLWLRPGKRGGLNGSKQHFLEVYSQESENLKFVVG
Ga0070763_105328662	3300005610	Soil	VPDKSGGLNGSTQHFLGVCSQESENLKFLVDVDLSAALLCSDPTG
Ga0080027_101958541	3300005993	Prmafrost Soil	MSGNPGGLNGSTQHFVEVYSRESENLKSLVGVDLSVALLCSDPT
Ga0075029_1001347062	3300006052	Watersheds	MSGKSGGLNGSTQHFLEVYSQESENLKFVVGVDSSA
Ga0075030_1001818112	3300006162	Watersheds	MSGKSGGLNGSTQHFLEVYSQESENLKFVVGVDSSAALLCSDPT
Ga0070716_1006227942	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VLRHLPGFAGGLNGSTQHFLEVYSQESENLKFVVGV
Ga0075014_1002316881	3300006174	Watersheds	MSGKSGGLNGSTQHFLEVYSQESENLKFVVGVDSSAALLCS
Ga0070765_1002661161	3300006176	Soil	VNFNLPDKSGGLNGSTQHFLEVYSQESENLKFLAGVDLSAAPLCSD
Ga0075425_1001619095	3300006854	Populus Rhizosphere	MCQRLVGSLNGSTQHFPEVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0073928_101568373	3300006893	Iron-Sulfur Acid Spring	LLLPGKSGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPTG
Ga0116225_11091252	3300009524	Peatlands Soil	MSDKAGGFNGSTQHLLEVYSQESESLRFFSGVDLSAVPLC
Ga0074045_102851513	3300010341	Bog Forest Soil	MSGLPGGLNGSTQHFPEVYSLASENPKFVVGVDLSAALLCSD
Ga0126378_123115252	3300010361	Tropical Forest Soil	LPDLRGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0126379_117297061	3300010366	Tropical Forest Soil	MHTGLTDSWAKVPDLSGGLNGSTQHFPAVYSPASETPKFVVGVDLSAA
Ga0136449_1009602801	3300010379	Peatlands Soil	MSGLRGGFNGSTQHLLEVYSQESESLRFFSGVDLSAVPLCPVPT
Ga0137392_116437582	3300011269	Vadose Zone Soil	MSGNPGGFNGSTQQLHEVYSQESESLRFFSGVDLSAVPLCPDP
Ga0137391_106401441	3300011270	Vadose Zone Soil	MSDNPGGLNGSTQHFPEVYSQESENLKFVVGVDLSATLLCSDPTGNSRLGLR
Ga0137388_100733941	3300012189	Vadose Zone Soil	MILFHLPGKSGGLNGSTQHFLEVYSQEFEILKFFLGADLTAAPLYPD
Ga0137365_102379661	3300012201	Vadose Zone Soil	MRPGMQVPGKSGGFNGSTQHWLEVYSQESESLRFFSGVDLSAALLCPDP
Ga0137365_103921643	3300012201	Vadose Zone Soil	MAAPDGTRSSPDKSGGFNGSTQHWLEVYSQESESLRFFSGVDLSAALLCPDP
Ga0137363_117241722	3300012202	Vadose Zone Soil	MSGYAGGFNGSTQHFLGVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0137399_103719593	3300012203	Vadose Zone Soil	MSGKVGGLNGSTQHFLEVYSQESENLKSLAGVDLSAAPLCSDPTG
Ga0137381_101926531	3300012207	Vadose Zone Soil	MGSVPDKRGGFNGSTQHWLEVYSQESESLRFFSGVDLSAALLCPDPTGH
Ga0137379_112585622	3300012209	Vadose Zone Soil	MGSVPDKRGGFNGSTQHWLEVYSQESESLRFFSGVDLSAALLCPDP
Ga0137372_106402992	3300012350	Vadose Zone Soil	MRPGMQVPGKSGGFNGSTQHWLEVYSQESESLRFFSGVDLSAALLCPDPTG
Ga0137360_104939961	3300012361	Vadose Zone Soil	MSGYAGGLNGSTQHFPEVYSQESENLKFVVGVDLS
Ga0137361_115715282	3300012362	Vadose Zone Soil	MSGNPGGLNGWTQHWLEVYSQESENLGFFSGVGLSAALLCRVPT
Ga0137397_101240204	3300012685	Vadose Zone Soil	VLGPGKSGGLNGSTQHLLAVYSPESENLKSLAGVDLSAAPLYSDPTG
Ga0137397_102943011	3300012685	Vadose Zone Soil	VLVLGKSGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0137359_106755741	3300012923	Vadose Zone Soil	MGWTQQLLEVYSRESENLRFFLGVGSSAVPLCPDPTGYSRTG
Ga0137359_107100811	3300012923	Vadose Zone Soil	MISKPWVLINAGGLNGSTQHFLGVYSQESENLKFVVGVDLSAALLCSDPT
Ga0137359_109376972	3300012923	Vadose Zone Soil	VPGKSGGLNGSTQHFPEVYSQESENLKFVVGVDLSAALLCSDP
Ga0137359_116206461	3300012923	Vadose Zone Soil	MSGKAGGLNGSTQHFLEVYSQESENLKSLAGVDLSAA
Ga0137407_102918931	3300012930	Vadose Zone Soil	VLGPGKSGGLNGSTQHFPEVYSQESENLKFVVGVDLSAALLCSDPTGNSRLGLRSSGS
Ga0137410_107671632	3300012944	Vadose Zone Soil	VESLIRHLSGFDGGLNGSTQHFLGVYSQESENLKFVVGVDLSAALLCSDPTG
Ga0126369_107038911	3300012971	Tropical Forest Soil	RGGLNGSTQHFLEVYSQESENLEFVAGVDLSAALLCSDPT*
Ga0126369_107827471	3300012971	Tropical Forest Soil	MPGKSGGLSRSTQHFLEVYSQESENLEFVVGVDLSAALLCSDP
Ga0182018_100854522	3300014489	Palsa	MSGNPGGLNGSTQHFLEVYSQESENLKFLVGVDLSAAPLCPDPTG
Ga0182018_102004271	3300014489	Palsa	MPDKSGGLNGSTQHFLEVYSQESENLKFLVGVDLGAALLCSDPTGNSRLGL
Ga0182017_104288011	3300014494	Fen	MGSTPGRRGGLNGSTQHFLEVYSQESENLKSFVGVDLSAALLCPDPT
Ga0182015_100989802	3300014495	Palsa	MCIVSDLRGGLNGSMRHGLGLYSQESESLAFFSGADLDAVLLCPDVIG*
Ga0182024_103196803	3300014501	Permafrost	MVRKMSGYPGGLNGSTQHFLEVYSQESENLKSLAGVDLSAAPLCS
Ga0182024_104104174	3300014501	Permafrost	MPVSDKSGGLNGSTQHQLEVYLQESQKLKSFASVDSD*
Ga0182024_107381251	3300014501	Permafrost	LSGGLNGSTQHFLEVYSQGSENLKFVVGVDLSAALL
Ga0137414_10062632	3300015051	Vadose Zone Soil	MTRPETPTSSHMSGKPGGLNGSTQHFVEVYSQESENLKSLAGVDLSAAPLCSDPTGNSRIGR
Ga0137403_104402792	3300015264	Vadose Zone Soil	MKSSRVPAKRGGLNGSTQHFLGVYSQESENLKFVVGVDLSAALL
Ga0132258_108034911	3300015371	Arabidopsis Rhizosphere	MCLVNGGGLNGSTQHFLGVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0187803_100093683	3300017934	Freshwater Sediment	MRFGGFNGSVQHSLEVYSQESRNLRFFSGVDLSAALLCRVQIENSRTGLFSWG
Ga0187819_107738373	3300017943	Freshwater Sediment	VSGYGGGLNGSTQHFLEVYSQESENLKFVVGVDLGAAL
Ga0187778_109401192	3300017961	Tropical Peatland	MSGYPGGLNGSTQHFLAVYSQGSENLKFVVGVDLSAALLCSDPTG
Ga0187783_104908592	3300017970	Tropical Peatland	MPGKSGGFNGSTQHFLEVYSQESENLKFVVGVDLSA
Ga0187784_105092413	3300018062	Tropical Peatland	MSGLPGGLNGSTQHFLEVYSRASENPKFVVGVDLGAAPLCSDPTG
Ga0187771_100408801	3300018088	Tropical Peatland	MACKLEIIQVPDKSGGFNGSTQHFLEVYSQGSENLKFVVGVDLSAGLLCSDPTGN
Ga0187771_105507091	3300018088	Tropical Peatland	MSGCPGGFNGSTQHFLEVYSQGSENLKFVVGVDLSAGLL
Ga0193725_11037872	3300019883	Soil	MCRNLPDWSGGLNGSTQHFLEVYSQESENLKSLAGVDLSAALLCSDPTGNS
Ga0193733_11010642	3300020022	Soil	MSGNAGGLNGSTQHFVEVYSQESENLKSLVGVDLSV
Ga0179590_10897822	3300020140	Vadose Zone Soil	VGFSTKMSGFPGGLNGSTQHFLEVYSQESENLKSLAGVDLSAAPLCSDPTG
Ga0210403_100051651	3300020580	Soil	MASASHVPDKSGGLNGSTQHFLEVYSQESENLKFVVGV
Ga0210403_100079641	3300020580	Soil	MIQMSGKAGGLNGSTQHFLEVYSQESENLKFVVGVDLSA
Ga0210401_103378701	3300020583	Soil	MSGKAGGLNGSTQHFLEVYSQESENLKFVVGVDLSAA
Ga0210401_108959471	3300020583	Soil	MSGNAGGLNGSTQHFLGVYSQASENLKFLVGVDLSAALLCSD
Ga0215015_101485582	3300021046	Soil	VPGKRGGLNGSTQHFPEVYSQESENLKFVVGVDLSAALLCSDPTGNSRLGLRSSGS
Ga0210405_102644393	3300021171	Soil	MSGNPGGLNGSTQHFLEVYSQESENLKFVVDVDLSAA
Ga0210393_100327989	3300021401	Soil	MREWSTPGLSGGLNGSTQHFPEVYSQASENPKFVVGVDLSAALL
Ga0210397_100151604	3300021403	Soil	VPGKSGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPTG
Ga0210387_108634761	3300021405	Soil	MSGNPGGLNGSTQHFLEVYSQESENLKFVVDVDLSAALLCSD
Ga0210386_110653661	3300021406	Soil	MSKLSDFVGGLNGSTQHFLEVYSQESENLKSLAGVDLSAAPLCPVPTGN
Ga0210383_100354601	3300021407	Soil	MSGYPGGLNGSTQHFLEVYSQESENLKFLVGVDLGAAPLC
Ga0210383_100904171	3300021407	Soil	MSGQRGGLNGSTQHFLDVYSQESENLKFLVGVDLGAA
Ga0210383_101795874	3300021407	Soil	VPDKSGGLNGSTQHFLEVYSQESENLKSLAGVDLSAAPLCP
Ga0210384_118669492	3300021432	Soil	MARRLSTYQCPISSGGLNGSTQHFLEVYSQESENLKSLAGVDLSAAPLC
Ga0210390_100611905	3300021474	Soil	VLVRDLSGSAGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSGPTGN
Ga0210402_102890904	3300021478	Soil	MSGKRGGLNGSTQHFLEVYSPEFENLKFGVGVDLSAAPLCSG
Ga0210410_110814361	3300021479	Soil	MVPEIGNISGNRGGLNGSTQHFPEVYSRASENPKFVVGVDLSAARLCSDPT
Ga0210409_100281491	3300021559	Soil	VPGKSGGLNGSTQHFPEVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0210409_102030723	3300021559	Soil	VESIARLAGQMSGKAGGLNGSTQHFPEVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0210409_102062054	3300021559	Soil	MSSKAGGLNGSTQHFLEVYSQESENLKFVVGVDLSA
Ga0210409_112114601	3300021559	Soil	MSGGLNGSTQHFPEVYSQESENLKFVVGVDLSAALLCSDLTGN
Ga0207699_105145602	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VPDNSGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDLTGNS
Ga0257151_10085131	3300026341	Soil	MWIQVSDYAGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0209648_104106832	3300026551	Grasslands Soil	MSDYLGGLNGWTQQLLEVYSRESENLRFFSGVDSSAVQLCPVPTGYSR
Ga0208365_10383731	3300027070	Forest Soil	VNTEFLLVRHLSGNPGGLNGSTQHFLEVYSQESENLKFVVDVDLSAAL
Ga0209116_100123212	3300027590	Forest Soil	MSDYAGGLNGSTQHFLEVYSQESENLKFLVGVDLSA
Ga0209117_10022808	3300027645	Forest Soil	MSDNPGGLNGSTQHFLEVYSQESENLKSLVGVDSSAA
Ga0209333_10603393	3300027676	Forest Soil	MSDYAGGLNGSTQHFLEVYSQESENLKFLVGVDLSAALLCSD
Ga0209447_100901611	3300027701	Bog Forest Soil	MSGKGGGLNGSTQHFLEVYSQESENLKFVVGVDLIAA
Ga0209465_100617811	3300027874	Tropical Forest Soil	MPGKSGGLSRSTQHFLEVYSQESENLEFVVGVDLSAALLCS
Ga0209698_101924541	3300027911	Watersheds	MSGKSGGLNGSTQHFLEVYSQESENLKFVVGVDSSAA
Ga0308309_105436601	3300028906	Soil	MPDKSGGLNGSTQHFLEVYSQESENLKFVAGVDLSAA
Ga0222749_100067551	3300029636	Soil	VPGKSGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPT
Ga0311340_103558522	3300029943	Palsa	MSGNPGGLNGSTQHFLEVYSQESENLKFLVGVDLSAAPL
Ga0311340_107450681	3300029943	Palsa	MSGNAGGLNGSTQHFLGVYSQESENLKFLVGVDLGAALL
Ga0170824_1105098112	3300031231	Forest Soil	MLPPGKSGGLNRSTQHFVAVYSQESENLKFVVGVDLSAALLCSGPIG
Ga0302325_104970041	3300031234	Palsa	MSGNPGGLNGSTQHFLEVYSQESENLKFLVGVDLSAAPLCPDPTGY
Ga0310915_101256414	3300031573	Soil	MSDYPGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPTGNSRLGLCS
Ga0310686_1147413484	3300031708	Soil	LSGNPGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPTGN
Ga0307476_110597171	3300031715	Hardwood Forest Soil	MSGYPGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDPTGNSRLGLRSSG
Ga0306917_106968192	3300031719	Soil	MSDYPGGLNGSTQHFLEVYSQESENLKFVVGVDLSAALLCSDP
Ga0307475_109590162	3300031754	Hardwood Forest Soil	MFSALDAFQVPGKSCQLNRSTQHFLEVYSQEFEILKFFLDADLSAAPL
Ga0311301_101483289	3300032160	Peatlands Soil	MILIASGGLSPDKSGGFNGSTQHLLEVYSQESESLRFFSGVDLSAVPLCPVPTG
Ga0311301_121694921	3300032160	Peatlands Soil	SDYRGGLRGSMQHFVGVYSQESESLRFFSGVDLGAALLCPDPLGRSQTGQFP
Ga0307471_1000525131	3300032180	Hardwood Forest Soil	MPDKRGGLNGSTQHFPEVYSQESENPKFVVGVDLSAALLCP
Ga0307471_1019423671	3300032180	Hardwood Forest Soil	MGTETDLSGFPGGLNGSTQHFPEVYSQESENLKFV
Ga0307471_1031074512	3300032180	Hardwood Forest Soil	MSGNPGGLNGSTQHFPEVYSQESENLKFVVGVDLSAAL
Ga0307471_1036822971	3300032180	Hardwood Forest Soil	MDFDFSDYPGGLNGSTQHFLEVYSQESENLKSLVGVDLSAAPLCSDPTGNSRSGLFSF
Ga0335082_111902871	3300032782	Soil	MSGFAGGLNGSTQHFPEVYSQESENLKSLAGVDLSAGLLCSDP
Ga0334854_016819_1663_1770	3300033829	Soil	MSGNPGGLNGSTQHFLEVYSQESENLKFLVGVDLSA
Ga0371487_0000758_47761_47877	3300033982	Peat Soil	MPDWRGGLNGSPQHFLEVYTQESENLKSFVGVGLSAALL
Ga0334822_093040_2_151	3300034070	Soil	MGSTPGRRGGLNGSTQHFLEVYSQESENLKSFVGVDLSAALLCPDPTGNS

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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