Metagenome / Metatranscriptome Family F077667

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077667
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	88 residues
Representative Sequence	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQR
Number of Associated Samples	106
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.66 %
% of genes near scaffold ends (potentially truncated)	97.44 %
% of genes from short scaffolds (< 2000 bps)	94.02 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.521 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.949 % of family members)
Environment Ontology (ENVO)	Unclassified (26.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.590 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.98% β-sheet: 0.00% Coil/Unstructured: 33.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00730	HhH-GPD	19.66
PF00633	HHH	14.53
PF10576	EndIII_4Fe-2S	6.84
PF14520	HHH_5	0.85
PF00912	Transgly	0.85
PF02371	Transposase_20	0.85
PF08502	LeuA_dimer	0.85
PF13413	HTH_25	0.85
PF08281	Sigma70_r4_2	0.85
PF02274	ADI	0.85
PF02518	HATPase_c	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	19.66
COG0177	Endonuclease III	Replication, recombination and repair [L]	19.66
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	19.66
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	19.66
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	19.66
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.85
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.85
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.85
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.85
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.38 %
Unclassified	root	N/A	31.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.38 %
Unclassified	root	N/A	31.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.52 %
Unclassified	root	N/A	31.62 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.39 %
Unclassified	root	N/A	31.62 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.39 %
Unclassified	root	N/A	31.62 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	52.99 %
Unclassified	root	N/A	31.62 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.42 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	51.28 %
Unclassified	root	N/A	31.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.42 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.28 %
Unclassified	root	N/A	31.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.42 %
Taphrinomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → Taphrinomycotina	0.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.28 %
Unclassified	root	N/A	31.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.42 %
Schizosaccharomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → Taphrinomycotina → Schizosaccharomycetes	0.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.28 %
Unclassified	root	N/A	31.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.42 %
Schizosaccharomycetales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → Taphrinomycotina → Schizosaccharomycetes → Schizosaccharomycetales	0.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.28 %
Unclassified	root	N/A	31.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.42 %
Schizosaccharomycetaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → Taphrinomycotina → Schizosaccharomycetes → Schizosaccharomycetales → Schizosaccharomycetaceae	0.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.28 %
Unclassified	root	N/A	31.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.42 %
Schizosaccharomyces	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → Taphrinomycotina → Schizosaccharomycetes → Schizosaccharomycetales → Schizosaccharomycetaceae → Schizosaccharomyces	0.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.28 %
Unclassified	root	N/A	31.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.42 %
Schizosaccharomyces pombe	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → Taphrinomycotina → Schizosaccharomycetes → Schizosaccharomycetales → Schizosaccharomycetaceae → Schizosaccharomyces → Schizosaccharomyces pombe	0.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig105696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300004081\|Ga0063454_101719866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300004479\|Ga0062595_101656443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300004479\|Ga0062595_102183720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300005177\|Ga0066690_10307847	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300005179\|Ga0066684_10592910	Not Available	744	Open in IMG/M
3300005184\|Ga0066671_10151911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1350	Open in IMG/M
3300005186\|Ga0066676_10815432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300005339\|Ga0070660_101425452	Not Available	588	Open in IMG/M
3300005344\|Ga0070661_100540978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300005434\|Ga0070709_10852960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300005435\|Ga0070714_100471279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1195	Open in IMG/M
3300005435\|Ga0070714_101263338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	721	Open in IMG/M
3300005458\|Ga0070681_10278791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1582	Open in IMG/M
3300005529\|Ga0070741_10059859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4451	Open in IMG/M
3300005534\|Ga0070735_10379827	Not Available	847	Open in IMG/M
3300005542\|Ga0070732_10929255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300005545\|Ga0070695_101851461	Not Available	507	Open in IMG/M
3300005557\|Ga0066704_10999905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300005558\|Ga0066698_10586660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300005560\|Ga0066670_10407945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300005561\|Ga0066699_11024617	Not Available	571	Open in IMG/M
3300005574\|Ga0066694_10580885	Not Available	522	Open in IMG/M
3300005575\|Ga0066702_10981938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300005576\|Ga0066708_11001975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005577\|Ga0068857_101662359	Not Available	624	Open in IMG/M
3300005587\|Ga0066654_10363686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300005587\|Ga0066654_10887807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300006031\|Ga0066651_10223668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300006173\|Ga0070716_100731620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300006175\|Ga0070712_101429126	Not Available	604	Open in IMG/M
3300006175\|Ga0070712_101734052	Not Available	547	Open in IMG/M
3300006755\|Ga0079222_11635010	Not Available	613	Open in IMG/M
3300006791\|Ga0066653_10684202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300006800\|Ga0066660_10343037	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300006800\|Ga0066660_11575884	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → Taphrinomycotina → Schizosaccharomycetes → Schizosaccharomycetales → Schizosaccharomycetaceae → Schizosaccharomyces → Schizosaccharomyces pombe	519	Open in IMG/M
3300009012\|Ga0066710_100665695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1585	Open in IMG/M
3300009012\|Ga0066710_104699862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300009038\|Ga0099829_11410327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300009088\|Ga0099830_10845696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300009137\|Ga0066709_103401594	Not Available	578	Open in IMG/M
3300010396\|Ga0134126_12775587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300010396\|Ga0134126_12799354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300011120\|Ga0150983_13442232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300011994\|Ga0120157_1088392	Not Available	619	Open in IMG/M
3300012001\|Ga0120167_1114997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012008\|Ga0120174_1080572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300012011\|Ga0120152_1024074	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300012096\|Ga0137389_11376942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300012189\|Ga0137388_11446555	Not Available	625	Open in IMG/M
3300012201\|Ga0137365_10487541	Not Available	906	Open in IMG/M
3300012204\|Ga0137374_10083311	All Organisms → cellular organisms → Bacteria	3087	Open in IMG/M
3300012206\|Ga0137380_10814018	Not Available	806	Open in IMG/M
3300012207\|Ga0137381_11283138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300012363\|Ga0137390_10633006	Not Available	1035	Open in IMG/M
3300012532\|Ga0137373_10599782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300012923\|Ga0137359_10664817	Not Available	910	Open in IMG/M
3300012976\|Ga0134076_10096899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1166	Open in IMG/M
3300012986\|Ga0164304_10934586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300014497\|Ga0182008_10721609	Not Available	571	Open in IMG/M
3300015195\|Ga0167658_1035350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1294	Open in IMG/M
3300015261\|Ga0182006_1279314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300015356\|Ga0134073_10332640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300015359\|Ga0134085_10132235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1051	Open in IMG/M
3300017656\|Ga0134112_10381163	Not Available	580	Open in IMG/M
3300017659\|Ga0134083_10440588	Not Available	574	Open in IMG/M
3300017927\|Ga0187824_10378595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300017959\|Ga0187779_10329890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	982	Open in IMG/M
3300017993\|Ga0187823_10168185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300018027\|Ga0184605_10503678	Not Available	527	Open in IMG/M
3300018482\|Ga0066669_10078232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2215	Open in IMG/M
3300019873\|Ga0193700_1051813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300019887\|Ga0193729_1198523	Not Available	686	Open in IMG/M
3300019888\|Ga0193751_1164755	Not Available	780	Open in IMG/M
3300019999\|Ga0193718_1112965	Not Available	544	Open in IMG/M
3300020070\|Ga0206356_11373255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300020070\|Ga0206356_11484218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300025909\|Ga0207705_11488293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300025917\|Ga0207660_10990114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300025922\|Ga0207646_10961215	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300025924\|Ga0207694_10959220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300025928\|Ga0207700_11433266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300025929\|Ga0207664_11423081	Not Available	614	Open in IMG/M
3300025944\|Ga0207661_11618680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300025949\|Ga0207667_10843716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300025949\|Ga0207667_11831712	Not Available	570	Open in IMG/M
3300026022\|Ga0208649_1023259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300026078\|Ga0207702_11110559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300026325\|Ga0209152_10464788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300026542\|Ga0209805_1302579	Not Available	607	Open in IMG/M
3300026547\|Ga0209156_10083670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1612	Open in IMG/M
3300026550\|Ga0209474_10150407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1517	Open in IMG/M
3300027842\|Ga0209580_10166509	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300027986\|Ga0209168_10151747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1174	Open in IMG/M
3300028577\|Ga0265318_10183677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300028653\|Ga0265323_10104776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300028654\|Ga0265322_10203916	Not Available	566	Open in IMG/M
3300028709\|Ga0307279_10002169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1815	Open in IMG/M
3300028799\|Ga0307284_10455058	Not Available	524	Open in IMG/M
3300028884\|Ga0307308_10437420	Not Available	627	Open in IMG/M
3300031238\|Ga0265332_10382107	Not Available	582	Open in IMG/M
3300031242\|Ga0265329_10273825	Not Available	566	Open in IMG/M
3300031247\|Ga0265340_10322765	Not Available	683	Open in IMG/M
3300031247\|Ga0265340_10515336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300031251\|Ga0265327_10051255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2155	Open in IMG/M
3300031344\|Ga0265316_11132171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300031595\|Ga0265313_10164626	Not Available	940	Open in IMG/M
3300031938\|Ga0308175_101293268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300031962\|Ga0307479_10940030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300031996\|Ga0308176_12024349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300032008\|Ga0318562_10475542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300032089\|Ga0318525_10352676	Not Available	755	Open in IMG/M
3300032770\|Ga0335085_11032655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300032770\|Ga0335085_11083707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300032783\|Ga0335079_10049674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4806	Open in IMG/M
3300033806\|Ga0314865_080320	Not Available	849	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.05%
Host-Associated	Host-Associated	17.09%
Engineered	Engineered	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.49%
Plants	Host-Associated → Plants	17.09%
Aquatic	Environmental → Aquatic	2.56%
Modeled	Engineered → Modeled	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.42%
Freshwater	Environmental → Aquatic → Freshwater	1.71%
Sediment	Environmental → Aquatic → Sediment	0.85%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.68%
Loam	Environmental → Terrestrial → Soil → Loam	13.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026022	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0695.00006240	2166559005	Simulated	VIASLVTLLIPLWILLGLLFISAVLGLLGRIQNGRYLRPVITLISKVPLFNRWLQKASTRARALESRSSRAR
Ga0063454_1017198662	3300004081	Soil	MVVADIVTLLIPLWILLGLLVVLGVIALLGRIQNGRYLRPLILGLMKVPLLKKWIQKASNAAIEKQN
Ga0062595_1016564432	3300004479	Soil	VIASIVTLLIPLWILLGLLFLMGVLALLGRIQNGRFLRPLINLIAKVPLFRRWLQKASNAALERSNPELARAMKKLEPHAKHMHDPQ
Ga0062595_1021837201	3300004479	Soil	VIASIVTLLIPLWILLGLVFLMGVLALLGRIQNGRYLRPLITLIAKVPLFKRWLQKASNAALERSNPELARAMKKLEPHAKHMHDPQ
Ga0066690_103078472	3300005177	Soil	VIASIVTLLIPLWILLGLVVLMGVLALLGRIQNGRFLRPLITLIAKVPLFRRGLQKASNAALERSNPELARAMKKLEP
Ga0066684_105929102	3300005179	Soil	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQR
Ga0066671_101519113	3300005184	Soil	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQRTGALKDPMKA
Ga0066676_108154322	3300005186	Soil	MIASIVTLLIPVWILLGLVVLMGVLALLGRIQNGRFLRPLITLIAKVPLFRRGLQKASNAALERSNPELARAMKKLEPHAKHMH
Ga0070660_1014254521	3300005339	Corn Rhizosphere	MPLAMLGADIVTLLIPVYVLVGLLVLIGTFALLGRVQNGRYIRPIVLGAAKVPLLRRGMEKASNAALERSNPELASAMKKIQRHGSRLNDPQQAQRAMSQLTRNERRALM
Ga0070661_1005409782	3300005344	Corn Rhizosphere	MTAAVLGSIATLLIPLWILLFLVVLLGAVALLGRVQNGRYLRPVILVLMKVPFLKKWIEKASNAAIERSNPELASAMKKMQRTGALRDPMKAQAAMSQLTRDERRALL
Ga0070709_108529601	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTASIATLLIPLWILLGLLAVLGVLALLGRIQNGRYLRPVINLIAKVPLFRRWLQKASTAALERSNPELASAMRKMQ
Ga0070714_1004712791	3300005435	Agricultural Soil	MVASIATLLIPVWILLFLVLLLGVFALLGRIQNGRYLRPVITTMMKVPILKKWIEKGSQAAIERSNPELASAMKKMQRTGALRDPMKAQAAMSQLTRDERRA
Ga0070714_1012633381	3300005435	Agricultural Soil	VVVADITTLLIPVWILLFLVLLLGVFALLGRIQNGRYLRPVITTMMKVPILKKWIEKGSQAAIERSNPELASAMKKMQRTG
Ga0070681_102787914	3300005458	Corn Rhizosphere	MLLADIVTLLIPVWILVGLLVLLGIFALLGRIQNGRYLRPIVAGIAKVPLFRRWLQKASNAALERSNPELASAMKKM
Ga0070741_100598591	3300005529	Surface Soil	VIASIVTLLIPLWILLGLVVLLGVLALLGRIQNGRFLRPLITLIAKVPLFRRGLQKASNAALERSNP
Ga0070735_103798271	3300005534	Surface Soil	VLADIVTLLIPLWILLGLVFLLGVVALLGRIQNGRYLRPVITFLTKVPLFKRWLEKASNAALERSNPELASAMKKMQRS
Ga0070732_109292551	3300005542	Surface Soil	MAAMLVADIVTILIPLWILLGLVVLLGVLALVGRIQNGRYLRPIIGGMSKVPILKKWMQKASTAALERSNPELASAMRKMQRTGALRDPMKAQAAMSQLTREERRAVLDMQ
Ga0070695_1018514612	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLGSIVTLLIPLWILLGLLVLLGSVALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQR
Ga0066704_109999052	3300005557	Soil	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQRTGALKDPMKAQAAMSQLSREERR
Ga0066698_105866602	3300005558	Soil	MLVADITTLLIPLWILLGLLVLLGIFALLGRVQNGKYLRPIVATIAKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALKDPMKAQSAMSMLSRDERRALLDMQEQQ
Ga0066670_104079452	3300005560	Soil	VTASITTLLIPLWILLGILALLGVLALLGRMQNGRYLRPVINLIAKVPLFRRWLQKASTAALERSNPELASAMRKMQR
Ga0066699_110246172	3300005561	Soil	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQRT
Ga0066694_105808852	3300005574	Soil	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFSRWLQKASNAALERSNPELASAMKKMQRTG
Ga0066702_109819382	3300005575	Soil	VIASIATLLIPLWILLGLVALFGVVAVLGRVQGGRYLRPLITLISKVPLFKRWLEKASTAALERSNPELA
Ga0066708_110019751	3300005576	Soil	VTASIATLLIPLWILLGILALLGVLALLGRMQNGRYLRPVINLIAKVPLFRRWLQKASTAALERSNPELASAMKKMQRS
Ga0068857_1016623591	3300005577	Corn Rhizosphere	MGSMVLADIVTLLIPVWILLGLLVLFGIFALLGRIQGGRYLRPVVGTIAKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALK
Ga0066654_103636862	3300005587	Soil	VTASIATLLIPLWILLGILALLGVLALLGRMQNGRYLRPVINLIAKVPLFRRWLQKASTAALERSNPELASAMRKMQRSGALRDPQRAQQALSS
Ga0066654_108878071	3300005587	Soil	MLGSLVTLLIPVWILLFLVVLLGVVALLGRVQNGRYLRPVILVLMKVPFLKKWIEKASNAAIERSNPELASAMKKMQ
Ga0070717_112576592	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTVGHTTRGRGATFPAVIADIWLLLRPVWILLGALVVFGLLVLLGRFRGGKYLRPVFGAMAKVPFLRRFLQRASEAAMERSNPELASAMKK
Ga0066651_102236681	3300006031	Soil	VIASIVTLLIPVWILLGLLFLMAVLALLGRIQNGRFLRPLINLIAKVPLFRRWLQKASNAALERSNPELARAMKKLE
Ga0070716_1007316202	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTASIATLLIPLWILLGLLAVLGILALLGRIQNGRYLRPVINLIAKVPIFRRWLQKASTAALERSNPELASAMRKMQRSGALRDPQRAQQALSSLSAQERRALIDMQE
Ga0070712_1014291262	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSPMVVADIFTILIPVWILLGLVAMLGVLALLGRIQNGRYLRPIIKLISKVPILRRWMEKASNAALERSNPELASA
Ga0070712_1017340521	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTASIATLLIPLWILLGLLAVLGVLALLGRIQNGRYLRPVINLIAKVPLFRRWLQKASTAALERSNPELASAM
Ga0079222_116350101	3300006755	Agricultural Soil	MTLAVLGADLVTLLIPVWIILGLLVLLGTFALLGRVQNGRYIRPVVMGVAKVPILRRGMEKASSAALERSNPELASAMKKIQRHGSRLNDPQQAQRAM
Ga0066653_106842021	3300006791	Soil	MLADITTLLIPLWILLGLLVLLGIFALLGRVQNGKYLRPIVATIAKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALKDP
Ga0066660_103430371	3300006800	Soil	MLGSIVTLLIPVWILLGLLVLLGTFALLGRVQNGRYLRPVIGLITKVPILRRWLQKASNAALERSNPELASA
Ga0066660_115758841	3300006800	Soil	PPSTMAAMLVADIATLLIPLWILLGLVALLGVFALLGRVQNGRYLKPVIGAMAKVPILKKWMEKASNAALERSNPELASAMRKMQRSGALRDPQRAQAAMSSLNAQERRALSHVGRCRSRSRFRSR*
Ga0066710_1006656951	3300009012	Grasslands Soil	MLGSIVTLLIPLWILLGLLVLLGTFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQ
Ga0066710_1046998622	3300009012	Grasslands Soil	MAAMLVADIVTLLIPVWILVGLVTLLGVLALLGRIQNGRYLRPIINLITKVPILRRWMQKASNAALERSNPELASAMKKMQRTGALRDPMK
Ga0099829_114103272	3300009038	Vadose Zone Soil	VIASIVTLLIPLWILLGLLFLMGVLALLGRIQNGRYLRPVINLIAKVPLFRRWLQKASNAALERS
Ga0099830_108456962	3300009088	Vadose Zone Soil	MLVADIVTILIPLWILLGLVALLGVLALLGRIQNGRYLRPIIKLISKVPILRRWMEKASNAALERSNPELASAMKKMQR
Ga0066709_1034015942	3300009137	Grasslands Soil	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKK
Ga0134126_127755871	3300010396	Terrestrial Soil	MAAMLVADLVTLLIPVWVLLGIVALFGVLALLARVQNGRFVKPIFGLAAKVPILRKGMERASKAALERSNPELASAMKKMQRTGAWRDPAKAQAALSQLTRDERRAV
Ga0134126_127993542	3300010396	Terrestrial Soil	VIASIVTLLIPLWILLGLLFLMGVLALLGRIQNGRFLRPLINLIAKVPLFRRWLQKASNAALERSNPELARAMKKLEPHAKHMHDPQQAQRAMSKL
Ga0150983_134422321	3300011120	Forest Soil	MSPMLVADIFTILIPLWILLGLVALLGVLALLGRIQNGRYLRPIIKLITKVPILKRWMEKASNAALERSNP
Ga0120157_10883921	3300011994	Permafrost	MRPMLVADIVTLLIPVWILLGLILLLGVFALLGRIQNGRYLRPVIGLISKVPILRKWLQKASNAALERSNPELASAMKK
Ga0120167_11149971	3300012001	Permafrost	MLVADIVTLLIPVWILLGLILLLGVFALLGRIQNGRYLRPVIGLISKVPILRKWLQKASNAALERSNPELASAMKKMQRTGALRDPMKAQ
Ga0120174_10805721	3300012008	Permafrost	MRPMLVADIVTLLIPVWILLGLILLLGVFALLGRIQNGRYLRPIIGLISKVPILRKWLQKASNAALERSNPELASAMKKMQRTGALRDPMKAQAAMSQLT
Ga0120152_10240741	3300012011	Permafrost	MLGSIATLLIPVWILLGLLALLGAFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQRTGALKDPM
Ga0137389_113769421	3300012096	Vadose Zone Soil	MLGSIATLLIPLWILLGLVALLGVFALLGRIQNGRYLRPVVGLIAKVPLFRKWLQKASNAALERSNPELASAMKKMQRTGALKDPMKAQAAMSQLTRDERRALLDMQ
Ga0137388_114465552	3300012189	Vadose Zone Soil	MLGSISTLLIPLWILLGLVALLGVFALLGRIQNGRYLRPVVGLIAKVPLFRKWLQKASNAALERSNPELASAMKKMQR
Ga0137365_104875412	3300012201	Vadose Zone Soil	MLVADITTLLIPLWILLGLLVLLGIFALLGRVQNGKYLRPIVATIAKVPLFRRWLQKASNAALERSN
Ga0137374_100833113	3300012204	Vadose Zone Soil	MLGSIVTLLIPVWILLGLVLLLGVFALLGRIQGGRYLRPIIALVSKVPLLRRWLQKASTAALERS
Ga0137380_108140182	3300012206	Vadose Zone Soil	MTAMLVADIVTLLIPVWILLGLITLLGVLALLGRVQNGRYLRPIINLITKVPILRRWMQKASNAALERSNPELASAMKKMQRTGALRDPMK
Ga0137381_112831382	3300012207	Vadose Zone Soil	MVVSAIVTLLIPLWILLGLLVLIGIFALLGRVRGGRYLRPVVGVIAKVPLFRRGLQKASNAALERSNPELASAMKKMQRTGALRDPMKAQAAMSQLTREERRALLDMQEQ
Ga0137390_106330061	3300012363	Vadose Zone Soil	MLASSLYILLIPVWIALFILILVGMLSLLGRVKGGKYLRPLFTTMAKVPILKRWLQKASTSAMERSNPELASAMRKMQRTGAIRDPQKAQAAMS
Ga0137373_105997822	3300012532	Vadose Zone Soil	MLGSIVTLLIPVWILLGLVLLLGVFALLGRIQGGRYLRPIIALVSKVPLLRRWLQKASTAALERSNPELASAMKKMQRSGALRDPMRAQAAMSQLTPQERRALMEMQEE
Ga0137359_106648172	3300012923	Vadose Zone Soil	MLVADIVTLLIPVWILLGLILLLGVFALLGRVQNGRYLRPIIGLISKVPILRKWLQKASNAALERSNPELASAMKKMQRTGA
Ga0134076_100968991	3300012976	Grasslands Soil	MAAMLGGLTTLLIPVWILLGLVLVLGVFALLGRIQNGRYLRPVVGVIAKVPLFRKWMQKASNAALERSNPELASAMKKMQRTGALRDPMKAQAA
Ga0164304_109345862	3300012986	Soil	MGSMVLADIVTLLIPVWILLGLLVLLGIFALLGRIRGGRYLRPIVGAIAKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALKDPMKAQSAMSVLSREER
Ga0182008_107216092	3300014497	Rhizosphere	MTLAVPVADLVTLLIPLWILLGLLVLLGTFALLGRVQNGRYIRPIVLTVAKVPLLRRGMEKASNAALERSNPELASAMKKIQRHGSRLNDPQQAQRAMSQLTRNERRALMEMQEQQGT
Ga0167658_10353503	3300015195	Glacier Forefield Soil	MAAMLVADIVTLLIPVWILLGLILLLGVFALLGRIQNGRYLRPIIGLISKVPILRKWLQKASNAALERSNPELASAMKKMQRTGALRD
Ga0182006_12793142	3300015261	Rhizosphere	MVASLATILIPVWILLFLLVLLGAVALLGRIQNGRYLRPVILGLMKVPFLKKWIEKASNAAIERSNPELASAMKKMQRTGALRDPMKAQ
Ga0134073_103326402	3300015356	Grasslands Soil	VIASIVTLLIPLWILLGLVVLMGVLALLGRIQNGRFLRPVITLIAKVPLFRRWLQKASNAALERSNPE
Ga0134085_101322351	3300015359	Grasslands Soil	MAAMLGGLTTLLIPVWILLGLVLLLGVFALLGRIQNGRYLRPVVGVIAKVPLFRKWMQKASNAALERSNPELASAMKKMQRTGALRDPMKAQAAMSQLTRDERRALLEM
Ga0134112_103811631	3300017656	Grasslands Soil	MAAMLGGLTTLLIPVWILLGLVLVLGVFALLGRIQNGRYLRPVVGVIAKVPLFRKWMQKASNAALERSNPELASAMKKMQ
Ga0134083_104405881	3300017659	Grasslands Soil	MLVADITTLLIPLWILLGLLVLLGIFALLGRVQNGKYLRPIVATIAKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALKDP
Ga0187824_103785951	3300017927	Freshwater Sediment	VTASIATLLIPLWILLGLLAVLGILALLGRIQNGRYLRPVINLIAKVPLFRRWLQKASTAAMERSNPELASAVRKLNTVASNPNPQAVQKAMSRHTPAERRAY
Ga0187779_103298901	3300017959	Tropical Peatland	MLLASNWPVLLIPLWIALFVLVLFGMLALLGRVQNGRYLRPLFTTMAKVPILKRWLQKASTAAMERSNPELASAMRKMQRSGAINDPQKAQAAMSQMTREERRAL
Ga0187823_101681852	3300017993	Freshwater Sediment	VIASIVTLLIPLWILLGLVFLMGVLAILGRIQNGRYLRPLITGLAKVPLFKRWLQKASNAALERSNPELARAMKKLEP
Ga0184605_105036781	3300018027	Groundwater Sediment	MAAMVGSLTTLLIPVWILLGLLFLLGAVALLGRIQGGRYLRPLVALIAKVPLFRRWMQKASNAALERSNPELASAMKKMQRT
Ga0066669_100782321	3300018482	Grasslands Soil	VQMLADITTLLIPLWILLGLLVLLGVFALLGRIQGGRYLRPVIALISKVPLFKRWLQKASTAALERSNPELASAMKKMQRSGA
Ga0193700_10518131	3300019873	Soil	MVSMIVADIVTLLIPVWILLGLLFLLGVLALLGRFRGGRYLRPVIGTISKVPLFRRGLQKASNAALERSNPELASAMKKMQRSGALKDPMKAQSAMSV
Ga0193729_11985231	3300019887	Soil	MTAMLVADIVTILIPLWVLLGLIALLGVFALLGRVQNGRYLRPIIGGISKVPILKRWMQKASNAALERSNPELASAMKK
Ga0193751_11647551	3300019888	Soil	VIASIVTLLIPLWILLGLLFLMGVLALLGRIQNGRYLKPVITLIAKVPLFRRWLQKASNAALERSNPELARAMKKLEPHAKHMHDPQQAQ
Ga0193718_11129651	3300019999	Soil	MGPMLVADIVTILIPLWILLGLVAMLGVLALLGRIQNGRYLRPIIKLISKVPILRRWMEKASNAALERSNPELASAMKKMQRTG
Ga0206356_113732552	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTAAVLGSIATLLIPLWILLFLVVLLGVVALLGRVQNGRYLRPVILVLMKVPFLKKWIEKASNAAIERSNPELASAMKKMQRTGALRDPMKAQAAMSQLTRDERRALL
Ga0206356_114842182	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MGSMVLADIVTLLIPVWILLGLLVLFGIFALLGRIQGGRYLRPVVGTIAKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALKDPMKAQSAMSVLSREERRALLEMQE
Ga0207705_114882931	3300025909	Corn Rhizosphere	MLADIVTLLIPVWILLGLVALLGVVALLGRIQNGRYLRPVITLISKVPLFKRGLEKASNAALERSNPELASAMKKMQRSGALRDPKRAQAAMSSL
Ga0207660_109901141	3300025917	Corn Rhizosphere	MVVADIATLLIPLWILLFLLVVLGALALLGRWRNGRYLRPILLFLMKVPLLKKWIEKASNAAIERQNPELASAM
Ga0207646_109612153	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLAFSLWLLTPVWILLVLVILLGIFALLARIRGGRYLRPLFTFLAKVPLLKRWLQKASDAALERSNPELASAMKKVQRFGGTGRDPIKAQQAMSRLTA
Ga0207694_109592201	3300025924	Corn Rhizosphere	MVVSSIATLLIPVWILLGLLVLLGVLALLGRLQGGRYLKPIVGTIAKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALKDPMKAQSAMSILSR
Ga0207700_114332662	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VIASIFTLLIPLWILLGIVFLMGVLAILGRIQNGRYLRPIITGLAKVPLFKKWLQKASNAALERSNPELARAMKKLEPHAKHMHDPQQAQK
Ga0207664_114230812	3300025929	Agricultural Soil	MTPVLVADIVTLLIPVWVLLGLLVLLGAFALLGRVQNGRYIRPIVMALAKVPLFRRGMEKASNAALERTNPDLASAMKKMKRHGTRL
Ga0207661_116186802	3300025944	Corn Rhizosphere	MGSMVLADIVTLLIPVWILLGLLVLFGIFALLGRIQGGRYLRPVVGTIAKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALKDPMRAQSAMSVLSR
Ga0207667_108437162	3300025949	Corn Rhizosphere	MTAAVLGSIATLLIPLWILLFLVVLLGAVALLGRVQNGRYLRPVILVLMKVPFLKKWIEKASNAAIERSNPELASAMKKMQRTGALRDPMKAQAAMSQLTRDE
Ga0207667_118317122	3300025949	Corn Rhizosphere	MAAPMVVSSIATLLIPVWILLGLLVLLGVLALLGRLQGGRYLKPIVGTIAKVPLFRRWLQKASNAALERSNPELASAM
Ga0208649_10232592	3300026022	Rice Paddy Soil	VIASIGTLLIPLWILLGLLVLMGVLALLGRIQGGRYLRPLIQLIAKVPLFRRWLEKASNAALERSNPELASAMKKMQR
Ga0207702_111105591	3300026078	Corn Rhizosphere	MLGSIVTLLIPLWILLGLLVLLGSVALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQRSGALKDPMKAQSAMSMLSREERRALL
Ga0209152_104647881	3300026325	Soil	MASAVLVADIATLLIPLWILLGLLVLLGTFALLGRVQNGRYIRPLVVGMAKVPILRRGMERASNAALERTNPELASAMKKMQRTGALKDPMKAQAAMSQLSREERRALLDMQE
Ga0209805_13025791	3300026542	Soil	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQRTGALKDPMKAQAA
Ga0209156_100836701	3300026547	Soil	MLGSIVTLLIPVWILLGLLVLLGSFALLGRVQNGRYLRPVIGLITKVPLFRRWLQKASNAALERSNPELASAMKKMQRTGALKDPMKAQAAMSQLSRE
Ga0209474_101504073	3300026550	Soil	VIASIVTLLIPVWILLGLLFLMAVLALLGRIQNGRFLRPLINLIAKVPLFRRWLQKASNAALERSNPELARAMKKLEPHAKHMHDPQQAQ
Ga0209580_101665091	3300027842	Surface Soil	MAAMVVADIVTILIPLWILLGLVALLGVFALLGRVQNGRYLRPIIGGMAKVPILKKWMQKASTAALERSNPELASA
Ga0209168_101517471	3300027986	Surface Soil	VLADIVTLLIPLWILLGLVFLLGVVALLGRIQNGRYLRPVITFLTKVPLFKRWLEKASNAALERSNPELASAMKKMQRSGALRDPNRAQAAMST
Ga0265318_101836772	3300028577	Rhizosphere	VLADIFTLLIPVWILLGLVGLLGVVAVLGRIQNGRYLRPVITLISKVPIFKRGLEKASNAALERSNPELASAMKKMQRSGALRDPNRAQAAMSQLTAQERRAL
Ga0265323_101047761	3300028653	Rhizosphere	MLASIYELLIPVWIILGLLVLLAVTAVLGRVQNGRFLKPVITLLSKVPLFRRWLQKASTAALERSNPELASAMKKMQRSGAMRDPMKAQAALSNLSPPE
Ga0265322_102039162	3300028654	Rhizosphere	VLADIFTLLIPVWILLGLVALLGVVAVLGRIQNGRYLRPLITLISKVPIFKRGLEKASNAALERSNPELASAMKKMQRSGALRDPN
Ga0307279_100021694	3300028709	Soil	MVSMIVADIVTLLIPVWILLGLLFLLGVLALLGRFRGGRYLRPVIGTISKVPLFRRGLQKASNAALERSNPEL
Ga0307284_104550582	3300028799	Soil	MVSMIVADIVTLLIPVWILLGLLFLLGALALLGRFRGGRYLRPVIGTISKVPLFRRGLQKASNAALERSNPELASAMKKMQRSGAL
Ga0307308_104374202	3300028884	Soil	MAAMVVADILTLLIPVWILLGLVAMLGVLALLGRIQNGRYLRPVINLISKVPILRRWLQKASNAALERSNPELASAMKK
Ga0265332_103821072	3300031238	Rhizosphere	MLASIYELLIPVWIILGLLVLLAVTAVLGRVQNGRFLKPVITLLSKVPLFRRWLQKASTAALERSNPELASAMKKMQRSGAMR
Ga0265329_102738251	3300031242	Rhizosphere	VIASIVTLLIPLWILLGVVALMGVLILLGRIRGGRYLRPVINLIAKVPLFKRWLQKASTAALERSNPEL
Ga0265340_103227652	3300031247	Rhizosphere	MLASIYELLIPVWIILGLLVLLAVTAVLGRVQNGRFLKPVITLLSKVPLFRRWLQKASTAALERSNPELASAMKK
Ga0265340_105153361	3300031247	Rhizosphere	VLADIFTLLIPVWILLGLVALLGVVAVLGRIQNGRYLRPLITLISKVPIFKRGLEKASNAALERSNPELASAMKKMQRSGALRDPNRAQAAMSQL
Ga0265327_100512551	3300031251	Rhizosphere	VLADIYTLLIPVWILLGLVGLLGVVAVLGRIRNGRYLRPVITLISKVPIFKRGLEKASNAALERSNPE
Ga0265316_111321712	3300031344	Rhizosphere	VIASIVTLLIPLWILLGLVAFMGVLILLGRIRGGRYLRPVINLLAKVPLFKRWLQKASTAALERSNPELASAMRKMQRSGALRDPNRAQAAMSTLTRHERQALISMQEEQG
Ga0265313_101646262	3300031595	Rhizosphere	VIASIVTLLIPLWILLGVVALMGVLILLGRIRGGRYLRPVINLIAKVPLFKRWLQKASTAALERSNPELASAMRKMQRSGALRDP
Ga0308175_1012932681	3300031938	Soil	MVASLATILIPVWILLFLLVLLGAVALLGRVQNGRYLRPVILGLMKVPFLKKWIEKASNAAIERSNPELASAMKKMQR
Ga0307479_109400301	3300031962	Hardwood Forest Soil	MLASIVTLLIPLWVLLGLVLILGTFALLGRIQNGRYLRPLINLISKVPLFRRWLQKASTAALERSNPELASAMKKMQRSGALRDPTRAQAAMSQLTREERRALI
Ga0308176_120243492	3300031996	Soil	MVASLATILIPVWILLFLLVVLGLVALLGRVQNGRYLRPVILGLMKVPFLKKWIEKASNAAIERSNPELASAMKKMQRTGALRDPMKAQAAMS
Ga0318562_104755422	3300032008	Soil	MVLADFVVLLIPLWILLGLLVLLGIFGLLARVQNGKYVRPIFAWLAKVPLFRRWLQKASTAAMERSNPELASAMRKMQRTGAHRDPQKAQAAMSQLTTQE
Ga0318525_103526761	3300032089	Soil	MVLADFVVLLIPLWILLGLLVLLGIFGLLARVQNGKYVRPIFAWLAKVPLFRRWLQKASTAAMERSNPELASAMRKMQRT
Ga0335085_110326552	3300032770	Soil	VIASLVTLLIPLWILLGVLVLMGVLALLGRIQNGRYLRPLINLIAKVPLFKRWLMKASTAAMER
Ga0335085_110837071	3300032770	Soil	MLVASAWYVLLIPLWIALFVLVLVGMLALLGRVQNGRYLRPLFTTMAKVPLLRRWLQKASTAAMERSNPELASAMRKMQRSGAIKDPQKAQAAMSQMTREERRA
Ga0335079_100496747	3300032783	Soil	MLVASAWYVLLIPVWIALFVLVLVGMLALLGRVQNGRYLRPLFTTMAKVPLLRRWLQKASTAAMERSNPELASAMRKMQRSGAIKDPQKAQAAMSQMT
Ga0314865_080320_1_291	3300033806	Peatland	MLVATSFAVLLIPLWILLFLVVVLGTFALLGRIRGGKYLRPVFAAMSKVPILRRWLQKASTAAMERSNPELASAMRKMQRTGAIKDPQKAQAAMSQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077667

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences