Metagenome / Metatranscriptome Family F077666

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F077666
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	59 residues
Representative Sequence	MGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIKVSPSM
Number of Associated Samples	86
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.90 %
% of genes near scaffold ends (potentially truncated)	62.39 %
% of genes from short scaffolds (< 2000 bps)	85.47 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (52.991 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (43.590 % of family members)
Environment Ontology (ENVO)	Unclassified (57.265 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.103 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.68% β-sheet: 40.91% Coil/Unstructured: 53.41%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04945	YHS	40.17
PF02405	MlaE	7.69
PF00072	Response_reg	4.27
PF01740	STAS	3.42
PF00005	ABC_tran	3.42
PF00563	EAL	2.56
PF00903	Glyoxalase	1.71
PF00196	GerE	0.85
PF00561	Abhydrolase_1	0.85
PF16793	RepB_primase	0.85
PF05491	RuvB_C	0.85
PF00723	Glyco_hydro_15	0.85
PF00571	CBS	0.85
PF06271	RDD	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	7.69
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	2.56
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	2.56
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	2.56
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	2.56
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.85
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.85
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.99 %
Unclassified	root	N/A	45.30 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.98 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.27 %
Candidatus Methanoliparia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Candidatus Methanoliparia	1.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.27 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.42 %
Candidatus Methanoliparales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Candidatus Methanoliparia → Candidatus Methanoliparales	1.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.71 %
Kangiellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	4.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.71 %
Candidatus Methanollivieraceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Candidatus Methanoliparia → Candidatus Methanoliparales → Candidatus Methanollivieraceae	1.71 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.71 %
Kangiellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.27 %
Candidatus Methanolliviera sp. GoM_asphalt	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Candidatus Methanoliparia → Candidatus Methanoliparales → Candidatus Methanollivieraceae → Candidatus Methanolliviera sp. GoM_asphalt	1.71 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	1.71 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.71 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Kangiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.27 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.71 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.71 %
Candidatus Methanolliviera sp. GoM_asphalt	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Candidatus Methanoliparia → Candidatus Methanoliparales → Candidatus Methanollivieraceae → Candidatus Methanolliviera sp. GoM_asphalt	1.71 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
unclassified Kangiella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → unclassified Kangiella	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.27 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.71 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.71 %
Candidatus Methanolliviera sp. GoM_asphalt	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Candidatus Methanoliparia → Candidatus Methanoliparales → Candidatus Methanollivieraceae → Candidatus Methanolliviera sp. GoM_asphalt	1.71 %
Kangiella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → unclassified Kangiella → Kangiella sp.	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10514531	Not Available	705	Open in IMG/M
3300002245\|JGIcombinedJ26739_100254054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1645	Open in IMG/M
3300002245\|JGIcombinedJ26739_100264572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1606	Open in IMG/M
3300004479\|Ga0062595_100022431	Not Available	2424	Open in IMG/M
3300005331\|Ga0070670_101324774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300005434\|Ga0070709_10709625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300005445\|Ga0070708_101549603	Not Available	617	Open in IMG/M
3300005468\|Ga0070707_101053174	Not Available	779	Open in IMG/M
3300005536\|Ga0070697_100112414	Not Available	2271	Open in IMG/M
3300005546\|Ga0070696_100180175	Not Available	1567	Open in IMG/M
3300005563\|Ga0068855_101038257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300005566\|Ga0066693_10217957	Not Available	748	Open in IMG/M
3300005587\|Ga0066654_10808860	Not Available	532	Open in IMG/M
3300005598\|Ga0066706_10628708	Not Available	852	Open in IMG/M
3300005614\|Ga0068856_102167034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300005995\|Ga0066790_10455785	All Organisms → cellular organisms → Archaea → Euryarchaeota → Candidatus Methanoliparia → Candidatus Methanoliparales → Candidatus Methanollivieraceae → Candidatus Methanolliviera sp. GoM_asphalt	546	Open in IMG/M
3300006173\|Ga0070716_100743248	Not Available	754	Open in IMG/M
3300006176\|Ga0070765_100422272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1247	Open in IMG/M
3300007788\|Ga0099795_10446366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300009038\|Ga0099829_10674157	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300009038\|Ga0099829_10958099	Not Available	710	Open in IMG/M
3300009038\|Ga0099829_11694169	Not Available	520	Open in IMG/M
3300009088\|Ga0099830_10010437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5645	Open in IMG/M
3300009088\|Ga0099830_10039827	All Organisms → cellular organisms → Bacteria → Acidobacteria	3249	Open in IMG/M
3300009088\|Ga0099830_10781775	Not Available	787	Open in IMG/M
3300009088\|Ga0099830_11514292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300009098\|Ga0105245_10100155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2680	Open in IMG/M
3300009098\|Ga0105245_10497737	Not Available	1234	Open in IMG/M
3300009101\|Ga0105247_10063744	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300009143\|Ga0099792_10474376	Not Available	779	Open in IMG/M
3300009148\|Ga0105243_10413529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300009174\|Ga0105241_10543142	Not Available	1042	Open in IMG/M
3300009177\|Ga0105248_11998050	Not Available	659	Open in IMG/M
3300011269\|Ga0137392_10232421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1515	Open in IMG/M
3300011269\|Ga0137392_10933320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300011269\|Ga0137392_11142541	Not Available	636	Open in IMG/M
3300011270\|Ga0137391_10282908	Not Available	1433	Open in IMG/M
3300011270\|Ga0137391_11555791	Not Available	505	Open in IMG/M
3300012189\|Ga0137388_10545909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300012189\|Ga0137388_11699626	Not Available	565	Open in IMG/M
3300012203\|Ga0137399_10087650	All Organisms → cellular organisms → Bacteria → Acidobacteria	2379	Open in IMG/M
3300012203\|Ga0137399_10903446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300012205\|Ga0137362_10069282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2917	Open in IMG/M
3300012205\|Ga0137362_10613548	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300012205\|Ga0137362_10773261	Not Available	823	Open in IMG/M
3300012205\|Ga0137362_11391012	Not Available	588	Open in IMG/M
3300012357\|Ga0137384_11580076	Not Available	506	Open in IMG/M
3300012361\|Ga0137360_10412043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300012362\|Ga0137361_10068031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3005	Open in IMG/M
3300012362\|Ga0137361_10925748	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300012362\|Ga0137361_11293358	Not Available	653	Open in IMG/M
3300012363\|Ga0137390_10047220	All Organisms → cellular organisms → Bacteria → Acidobacteria	4166	Open in IMG/M
3300012363\|Ga0137390_10473915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300012363\|Ga0137390_10519638	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300012363\|Ga0137390_10683023	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300012363\|Ga0137390_11599020	Not Available	589	Open in IMG/M
3300012363\|Ga0137390_11932598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300012917\|Ga0137395_10432716	Not Available	944	Open in IMG/M
3300012917\|Ga0137395_10984617	Not Available	605	Open in IMG/M
3300012917\|Ga0137395_11041501	Not Available	584	Open in IMG/M
3300012918\|Ga0137396_10035885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3319	Open in IMG/M
3300012922\|Ga0137394_10249171	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300012923\|Ga0137359_10540658	Not Available	1025	Open in IMG/M
3300012923\|Ga0137359_10823927	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300012925\|Ga0137419_10081724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2187	Open in IMG/M
3300012927\|Ga0137416_10033591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3448	Open in IMG/M
3300012927\|Ga0137416_10091313	All Organisms → cellular organisms → Bacteria	2267	Open in IMG/M
3300012927\|Ga0137416_11764149	Not Available	565	Open in IMG/M
3300012929\|Ga0137404_10829971	Not Available	841	Open in IMG/M
3300012929\|Ga0137404_11023608	Not Available	756	Open in IMG/M
3300012957\|Ga0164303_10984428	Not Available	599	Open in IMG/M
3300012961\|Ga0164302_10600464	Not Available	798	Open in IMG/M
3300012989\|Ga0164305_11775687	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300013297\|Ga0157378_12724615	Not Available	547	Open in IMG/M
3300013770\|Ga0120123_1138754	Not Available	573	Open in IMG/M
3300014969\|Ga0157376_11131646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → unclassified Kangiella → Kangiella sp.	809	Open in IMG/M
3300015245\|Ga0137409_10125453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2363	Open in IMG/M
3300015264\|Ga0137403_10734298	Not Available	846	Open in IMG/M
3300015374\|Ga0132255_105186423	All Organisms → cellular organisms → Archaea → Euryarchaeota → Candidatus Methanoliparia → Candidatus Methanoliparales → Candidatus Methanollivieraceae → Candidatus Methanolliviera sp. GoM_asphalt	551	Open in IMG/M
3300018433\|Ga0066667_11998749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	532	Open in IMG/M
3300019877\|Ga0193722_1080451	Not Available	800	Open in IMG/M
3300019878\|Ga0193715_1024612	All Organisms → cellular organisms → Bacteria → Acidobacteria	1307	Open in IMG/M
3300019879\|Ga0193723_1050298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1226	Open in IMG/M
3300019885\|Ga0193747_1069178	Not Available	871	Open in IMG/M
3300020583\|Ga0210401_10338634	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300020583\|Ga0210401_10698237	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300021086\|Ga0179596_10146249	Not Available	1120	Open in IMG/M
3300021420\|Ga0210394_10788107	Not Available	831	Open in IMG/M
3300021478\|Ga0210402_10219402	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300021559\|Ga0210409_10881703	Not Available	768	Open in IMG/M
3300025320\|Ga0209171_10318607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300025905\|Ga0207685_10782033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300025906\|Ga0207699_10928041	Not Available	643	Open in IMG/M
3300025915\|Ga0207693_10346465	Not Available	1163	Open in IMG/M
3300025922\|Ga0207646_10938707	Not Available	766	Open in IMG/M
3300026041\|Ga0207639_10980996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	791	Open in IMG/M
3300026078\|Ga0207702_11905442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	586	Open in IMG/M
3300027610\|Ga0209528_1013470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1774	Open in IMG/M
3300027846\|Ga0209180_10475649	Not Available	702	Open in IMG/M
3300027855\|Ga0209693_10610675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300027889\|Ga0209380_10111640	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300027903\|Ga0209488_10239037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1363	Open in IMG/M
3300028673\|Ga0257175_1018632	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300028828\|Ga0307312_11050468	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300028885\|Ga0307304_10490838	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300028906\|Ga0308309_11895044	Not Available	503	Open in IMG/M
3300031057\|Ga0170834_110986793	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300031058\|Ga0308189_10336957	Not Available	602	Open in IMG/M
3300031093\|Ga0308197_10229150	Not Available	648	Open in IMG/M
3300031128\|Ga0170823_11150266	Not Available	761	Open in IMG/M
3300031231\|Ga0170824_124965380	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300031421\|Ga0308194_10379648	Not Available	510	Open in IMG/M
3300031720\|Ga0307469_10095319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2070	Open in IMG/M
3300031962\|Ga0307479_11685366	Not Available	588	Open in IMG/M
3300032180\|Ga0307471_100028281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4265	Open in IMG/M
3300032180\|Ga0307471_100275880	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300032180\|Ga0307471_100450920	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.03%
Host-Associated	Host-Associated	11.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.18%
Plants	Host-Associated → Plants	11.97%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.94%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.42%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	43.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_105145311	3300001593	Forest Soil	KVYMGTIVTNGDAWVLKSGNEQYRLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM*
JGIcombinedJ26739_1002540543	3300002245	Forest Soil	MGTIVRDGDTYVLKAGNAKYLLDSQKKAKTYKGKDVNLTGTLDKAKSLIHVEKIKPSPSM
JGIcombinedJ26739_1002645723	3300002245	Forest Soil	LKSGNEQYRLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM*
Ga0062595_1000224313	3300004479	Soil	MGTIVTNGDACLLKSGNEQYLLDSQKKVRNYKGKDVEVTGTLDKEKHLIHVAKIKLSSSM
Ga0070670_1013247741	3300005331	Switchgrass Rhizosphere	PDQSGVKVYMGTILKDGDAYVLKTGNQTYLLDSQKKAKNYNGKDVQLTGRLDNDKKLIHVEKIKVSPAI*
Ga0070709_107096254	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RADVRVYMGTIVKDGDAYVLKAGNEKYLLDSQKKAQKYNGKDVKITGTLDNAKNLIHVEKIKSSPSM*
Ga0070708_1015496031	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DGDAYFLKAGNEKYLLDSQKKAKNYKGKDVKITGTLDKVKNLIHIEKIKPSPSM*
Ga0070707_1010531741	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	QSDRADVRVYMGTIVQDGDSYVLKAGNEQYLLDSQKKARKYKGKDVKITGTLERAKNLIHVEKITASPSM*
Ga0070697_1001124143	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGTIVQDGDSYVLKAGNEQYLLDSQKKARKYKGKDVKITGTLERAKNLIHVEKITASPSM
Ga0070696_1001801753	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LKSGNEQYLLDSQKKVRNYKGKDVEVTGTLDKEKHLIHVAKIKLSSSM*
Ga0068855_1010382571	3300005563	Corn Rhizosphere	ILKNGDAYVLKTGNQTYLLDNQKKAKNYNGKDVQLTGRLDNDKKLIHVEKIKVSPAI*
Ga0066693_102179571	3300005566	Soil	DAYVLKAANEKYLLDGQKKAKDYKGKDVKVTGTLDKTRNLIHVEKIELSPSM*
Ga0066654_108088602	3300005587	Soil	LKAANEKYLLDGQKKAKDYKGKDVKVTGTLDKTRNLIHVEKIELSPSM*
Ga0066706_106287083	3300005598	Soil	ANEKYLLDSQKKAKNYKGKDVKITGRLDKTRNLIHVEKIEVSPST*
Ga0068856_1021670342	3300005614	Corn Rhizosphere	SGVKVYMGTILKDGDAYVLKTGNQTYLLDNQKKAKNYNGKDVQLTGRLDNDKKLIHVEKIKVSPAI*
Ga0066790_104557851	3300005995	Soil	YLLDSQKKAKRYKGRHVQIMGTLDKETNVIHVEKIKVSSSM*
Ga0070716_1007432483	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGTIVTNGDNWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIKVSPSM
Ga0070765_1004222724	3300006176	Soil	LKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM*
Ga0099795_104463661	3300007788	Vadose Zone Soil	MGTIVTNGDAWVLQSGNEQYLLDSQKKARKYKGKDVKITGTLERAKNLIHVEKITASPSM
Ga0099829_106741572	3300009038	Vadose Zone Soil	DVKVYMGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM*
Ga0099829_109580992	3300009038	Vadose Zone Soil	MGTIVQDGDSYVLKPGNEQYLLDSQKKARKYKGKDVKITGTLERAKNLIHVEKITASPSM
Ga0099829_116941691	3300009038	Vadose Zone Soil	MGTIVTNGDAWVLKSGNEQYLMDNQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM
Ga0099830_100104378	3300009088	Vadose Zone Soil	SDRPDVRVYMGAIVQNGDSCVLKAGNQHYLLDSQKKARKYKGKDVKITGTLDKTKNLIHVEKIDASPSM*
Ga0099830_100398274	3300009088	Vadose Zone Soil	MGTIVKDGDAYYLKAGNEKYLLDSQKKAKNYKGKDVKITGTLDKVKNLIHIEKIKPSPSM
Ga0099830_107817752	3300009088	Vadose Zone Soil	AKVYMGTIVTNGDAWVLKSGNEQYLLDSQKNAKKYNGKDVEVTGTLDKEKHLIHVEKIRVSPSM*
Ga0099830_115142922	3300009088	Vadose Zone Soil	QSDRRDVRVYMGTIVKDGDAYILKSGNERYLLDSQKKAKNYKGKDVQITGTLDKDKNLIHVEKIKVSPSM*
Ga0105245_101001556	3300009098	Miscanthus Rhizosphere	AYVLKTGNQTYFLDNQKKAKNYSGKDVQLTGTLDNDKKLIHVEKIKVSPAM*
Ga0105245_104977372	3300009098	Miscanthus Rhizosphere	MGTIVTNGDACVLKSGNEKYLLDSQKKVKNYKGKDVEVTGTLDAEKHLIHVEKIRVAPSM
Ga0105247_100637442	3300009101	Switchgrass Rhizosphere	MGTIVTNGDACVLKSGNEKYLLDSQKKGKNYKGKDVEVTGTLDAEKHLIHVEKIRVAPSM
Ga0099792_104743761	3300009143	Vadose Zone Soil	KPGNEQYLLDSQKKARKYKGKDVKITGTLERAKNLIHVEKITASPSM*
Ga0105243_104135292	3300009148	Miscanthus Rhizosphere	MGTIVTNGDACVLKSGNEKYLLDSQKKVKNYKGKDVEVTGTLDTEKHLIHVEKIRVAPSM
Ga0105241_105431421	3300009174	Corn Rhizosphere	AKVYMGTIINTGDFYVLKSANEEYLLDSQTKAKKYQGKDVQVTGTLDKDKKLIHVKQIKVSPSM*
Ga0105248_119980501	3300009177	Switchgrass Rhizosphere	MGTIVTNGDACVLKSGNEKYLLDSQKKVKNYKGKDVEVTGTLDAEKHLIHVEKIR
Ga0137392_102324214	3300011269	Vadose Zone Soil	MGTIVTNGDVWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIKVSPSM
Ga0137392_109333202	3300011269	Vadose Zone Soil	KSGNEKYLLDSQKKAKNYKGKDVQITGTLDKDKNLIHVEKIKVSPSM*
Ga0137392_111425411	3300011269	Vadose Zone Soil	RPDRADVRVYMGTIVKDGDAYVLKTGNEKYLLDSQKKAKKYNGKDVKITGTLDKAKNLIHVEKIKPSSSM*
Ga0137391_102829082	3300011270	Vadose Zone Soil	MGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIKVSPSM
Ga0137391_115557912	3300011270	Vadose Zone Soil	GDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDESPSM*
Ga0137388_105459092	3300012189	Vadose Zone Soil	VKDGDAYILKSGNEKYLLDSQKKAKNYKGKDVQITGTLDKDKNLIHVEKIKVSPSM*
Ga0137388_116996261	3300012189	Vadose Zone Soil	YVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDASPSM*
Ga0137399_100876502	3300012203	Vadose Zone Soil	MGAIVQNGDSYVLKAGNQQYLLDSQKRARKYKGKDVKITGTLDKAKNLIHVEKIDASPSM
Ga0137399_109034461	3300012203	Vadose Zone Soil	MGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRV
Ga0137362_100692826	3300012205	Vadose Zone Soil	MGAIVQNGDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKTKNLIHVEKIDASPSM
Ga0137362_106135481	3300012205	Vadose Zone Soil	DVRVYMGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM*
Ga0137362_107732612	3300012205	Vadose Zone Soil	MGTIVQDGNAYILKSGNEEYLLDNQKKAKNYQGKDVKITGTLDKAKNLIHVEKIKPSPSM
Ga0137362_113910122	3300012205	Vadose Zone Soil	MGTIVKDGDSYVLKAGNEQYLLDSQKKAGKYKGQDVEIMGTLDKAKNLIHVEKINASPSM
Ga0137384_115800763	3300012357	Vadose Zone Soil	PDVRVYMGAIVQNGDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDESPSM*
Ga0137360_104120432	3300012361	Vadose Zone Soil	MGTIVQDGNGYILKSGNEEYLLDNQKKAKNYQGKDVKITGTLDKAKKLIHVEKIKPSPSM
Ga0137361_100680314	3300012362	Vadose Zone Soil	MGTIVTNGDAWVLKSGNEHYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM
Ga0137361_109257483	3300012362	Vadose Zone Soil	GAIVQNGDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGRLDKAKNLIHVEKIDASPSM*
Ga0137361_112933582	3300012362	Vadose Zone Soil	MGTIAQDGDSYVLKPGNEQYLLDSQKKARKYKGKDVKITGTLERAKNLIHVEKITASPSM
Ga0137390_100472205	3300012363	Vadose Zone Soil	MGTILKDGDAYFLKAGNEKYLLDSQKKAKNYKGKDVKITGTLDKVKNLIHIEKIKPSPSM
Ga0137390_104739152	3300012363	Vadose Zone Soil	MGAIVQNGDSCVLKAGNQHYLLDSQKKARKYKGKDVKITGTLDKTKNLIHVEKI
Ga0137390_105196383	3300012363	Vadose Zone Soil	EARAREGRPEVRVYMGTIVTNGDAWVLKSGNEQYLMDNQKKAKNYKGKDVEVTGTLDMEKHLIHVEKIKVSPSM*
Ga0137390_106830233	3300012363	Vadose Zone Soil	MGAIVQNGDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKTKNLIHVEK
Ga0137390_115990202	3300012363	Vadose Zone Soil	NQQYLLDSQKKARKYKGKDVKITGTLDKTKNLIHVEKIDASPSM*
Ga0137390_119325981	3300012363	Vadose Zone Soil	MGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHL
Ga0137395_104327163	3300012917	Vadose Zone Soil	DSQKKARKYKGKDVKITGTLDKTKNLIHVEKIDASPSM*
Ga0137395_109846172	3300012917	Vadose Zone Soil	MGSIVQNGNSYVLKACNQQYLLDSQKKARKYKGKDVKITGTLDKTKNLIHVEKI
Ga0137395_110415012	3300012917	Vadose Zone Soil	NQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDASPSM*
Ga0137396_100358854	3300012918	Vadose Zone Soil	MGSIVQNGNSYVLKAGNQQYLLDSQKRARKYKGKDVKITGTLDKAKNLIHVEKIDASPSM
Ga0137394_102491711	3300012922	Vadose Zone Soil	GRPDVRVYMDTIVTNGDGWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM*
Ga0137359_105406581	3300012923	Vadose Zone Soil	NQQYLLDSQKKARKYTGKDVKITGTLDKAKNLLHVEKIDESPSM*
Ga0137359_108239271	3300012923	Vadose Zone Soil	EMVYMGTIVKDGDAYVLQTGNEKYLLDSQKKAKKYKGKDVKITGTLDKAKNLIHVEKIKPSPSM*
Ga0137419_100817243	3300012925	Vadose Zone Soil	MGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM
Ga0137416_100335911	3300012927	Vadose Zone Soil	TSPTSEAKQQSDRPDVRVYMGSIVQNGNSYVLKAGNQQYLLDSQKRARKYKGKDVKITGTLDKAKNLIHVEKIDASPSM*
Ga0137416_100913131	3300012927	Vadose Zone Soil	MGTIVTNGDAWVLKSGNEQYLLDSQKKAKKYKGKDVEVTGTLDMEKHLIHVEKIKVSPSM
Ga0137416_117641491	3300012927	Vadose Zone Soil	KDGDAYVLQTGNEKYLLDSQKKAKKYKGKDVKITGTLDKAKNLIHVEKIKPSPSM*
Ga0137404_108299711	3300012929	Vadose Zone Soil	MGAIVQNGDSYVLKAGNQQYLLDSQKRARKYKGKDVKITGTLDKAKNLIHVENIDASPSM
Ga0137404_110236082	3300012929	Vadose Zone Soil	MGTIVQDGGAYVLKAGNERYLLDSQKKAKNYTGKDVKITGTLDKAKNLIHIEKIKSSPSM
Ga0164303_109844281	3300012957	Soil	MGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKEVQITGTLDKEKKLIHVEKIKVSPSM
Ga0164302_106004641	3300012961	Soil	KVYMGTIVNTGDSYVLKSANEEYLLDSQTKAKKYQGKDVQITGTLDKDNKLIHVKQIKLSPSM*
Ga0164305_117756872	3300012989	Soil	QKKARKYKGKDVTITGTLDKAKNLIHVEKIDESPSM*
Ga0157378_127246151	3300013297	Miscanthus Rhizosphere	DRPAVKVYMGTIVTNGDACVLKSGNEKYLLDSQKKVKNYKGKDVEVTGTLDAEKHLIHVEKIRVAPSM*
Ga0120123_11387542	3300013770	Permafrost	LKAGNEKYLPDSQKKAKNYKGKDVKIMGTLDKAKNLIHVEKITASPSI*
Ga0157376_111316462	3300014969	Miscanthus Rhizosphere	NRADAKVYMGTIVNTGDSYVLKSANEEYLLDSQTKAKKYQGKDVQITGTLDKDNKLIHVKQIKLSPSM*
Ga0137409_101254531	3300015245	Vadose Zone Soil	MGSIVQNGNSYVLKAGNQQYLLDSQKRARKYKGKDVKITGTLDKAKNLIHVENIDASPSM
Ga0137403_107342981	3300015264	Vadose Zone Soil	MGTIVQDGGAYVLKAANERYLLDSQKKAKNYTGKDVKITGTLDKAKNLIHIEKIKSSPSM
Ga0132255_1051864232	3300015374	Arabidopsis Rhizosphere	GTILKDGDAYVLKTGNQTYVLDSQKKAKNYNGKDVQLTGTLDNDKKVIYVEKIKVSPAM*
Ga0066667_119987491	3300018433	Grasslands Soil	SDRPDVRVYMGAIVQNGDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDESPSM
Ga0193722_10804512	3300019877	Soil	LKSGNEQYLLDSQKKAKNYKGKDVEVTGTLNKEKHLIHVEKIRVSPSM
Ga0193715_10246123	3300019878	Soil	QSDRPDVRVYMGAVVQNGDSYVLKSGNQQYLLDSQKKARKYKGKEVKITGTLDKAKNLIHVKKIDESPSM
Ga0193723_10502983	3300019879	Soil	PDLRVYIGTIVEDGDAYVLKAANEKYLLDSQKKAKNYKGKEVQITGTLDKEKKLIHVEKIKVSPSM
Ga0193747_10691783	3300019885	Soil	KQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDESPSM
Ga0210401_103386343	3300020583	Soil	LKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM
Ga0210401_106982371	3300020583	Soil	VTNGDAWVLKSGNEQYLLDNQKKARNYKGKDVEVTGTLDKEKHLIHVEKIKVSPSM
Ga0179596_101462491	3300021086	Vadose Zone Soil	QYLLDSQKKARKYKGKDVKITGTLERAKNLIHVEKITASPSM
Ga0210394_107881073	3300021420	Soil	DVRVYMGTIVQDGDSYVLKAGNEQYLLESQKKVQKYKGKDVKITGTLDKAKKLIHVEKINESPSM
Ga0210402_102194023	3300021478	Soil	MGTIVTNGDAWVLKSGNEQYLLDNQKKARNYKGKDVEVTGTLDKEKHLIHVEKIKVSPSM
Ga0210409_108817031	3300021559	Soil	VYIGTIVRDGDAYVLKAGNEKYLLDSQKKAKNYKGKDVKVTGTLEKTNNVIHVEKIEVSPSM
Ga0209171_103186073	3300025320	Iron-Sulfur Acid Spring	VRVYMGTIVRDGDTYVLKAGNAKYLLDSQKKAKTYKGKDVNVTSTLDKAKNLIHVEKIKPSPSM
Ga0207685_107820331	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MGTIVKDGDAYVLKAGNEKYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVAKIKLSSSM
Ga0207699_109280411	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PDRADVRVYMGTIVKDGDAYVLKAGNEKYLLDSQKKAQKYNGKDVKITGTLDNAKNLIHVEKIKSSPSM
Ga0207693_103464652	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGTIVTNGDACVLKSGNEKYLLDSQKKIKNYKGKDVEVTGTLDTEKHLIHVEKIRVAPSM
Ga0207646_109387073	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ADVRVYMGTIVQDGDSYVLKAGNEQYLLDSQKKARKYKGKDVKITGTLERAKNLIHVEKITASPSM
Ga0207639_109809962	3300026041	Corn Rhizosphere	MGTILKDGDAYVLKTGNQTYLLDNQKKAKNYNGKDVQLTGRLDNDKKLIHVEKIKVSPAI
Ga0207702_119054421	3300026078	Corn Rhizosphere	RQSDRPDVRVYMGTIVQDGDSYVLKAGNEQYLLESQKKVQKYKGKDVKITGTLDKAKNLIHVEKINLSPSI
Ga0209528_10134703	3300027610	Forest Soil	LKSGNEQYRLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM
Ga0209180_104756492	3300027846	Vadose Zone Soil	MGTIVKDGDAYFLKAGNEKYLLDSQKKAKNYKGKDVKITGTLDKVKNLIHIEKIKPSPSM
Ga0209693_106106752	3300027855	Soil	LKSGNEQYLLDSQKKAKKYKGKDVEVTGTLDMEKHLIHVDKIKVSPSM
Ga0209380_101116405	3300027889	Soil	EAKPHPDRADVRVYMGTIVKEGDVCVLKAGNEKYQLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIRVSPSM
Ga0209488_102390373	3300027903	Vadose Zone Soil	MGAIVQNGDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDESPSM
Ga0257175_10186321	3300028673	Soil	MGTIVKDGDAYFLKAGNEKYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIKVSPSM
Ga0307312_110504681	3300028828	Soil	LDSQKKARKYKGKEVKITGTLDKAKNLIHVKKIDESPSM
Ga0307304_104908383	3300028885	Soil	VRVYMGAIVQNGDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDESPSM
Ga0308309_118950441	3300028906	Soil	VKDGDVYVLRAGNEKYLLDSQKKAKNYKGKDVKITGTLNKTKNVIHVEKIEASPSM
Ga0170834_1109867931	3300031057	Forest Soil	YMGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIKVSPS
Ga0308189_103369571	3300031058	Soil	MGAIVQNGDSYVLKAGNQQFLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDEAPSM
Ga0308197_102291503	3300031093	Soil	EAKPQRDRPDVRVYMGTIIQDGGTYFLKAGNEKYLLDSQKKAKNYKGKEVQITGTLDKEKNLIHVEKIEASPSM
Ga0170823_111502663	3300031128	Forest Soil	EGRPDVKVYMGTIVTNGDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKEKHLIHVEKIKVSPSM
Ga0170824_1249653803	3300031231	Forest Soil	LKSGNEQYLLDSQKKAKNYKGRDVEVTGTLDKEKHLIHIEKIKVSPSM
Ga0308194_103796481	3300031421	Soil	SDVRVYMGAIVQNGDSYVLKAGNQQYLLDSQKKARKYKGKDVKITGTLDKAKNLIHVEKIDEAPSM
Ga0307469_100953193	3300031720	Hardwood Forest Soil	YMGTILKDGDAYVLKTGNQTYLLDSQKKAKNYNGKDVQLTGTLDNDKKLIHVEKIKVSPA
Ga0307479_116853662	3300031962	Hardwood Forest Soil	GDAWVLKSGNEQYLLDSQKKAKNYKGKDVEVTGTLDKERHLIHVEKIKVSPSM
Ga0307471_1000282811	3300032180	Hardwood Forest Soil	PPSEARAREGRPDVKVYMGTIVTNGDAWVLKSGNEQYLLDSQKKVKNYKGKDVEVTGTLDMEKHLIHVEKIKVSPSM
Ga0307471_1002758803	3300032180	Hardwood Forest Soil	ETKARVDRPAVKVYMGTIVTNGDACVLKSGNEKYLLDSQKKTKNYKGKDVEVTGTLDTEKHLIHVEKIRVSPSM
Ga0307471_1004509201	3300032180	Hardwood Forest Soil	VLKAANEKYRLDSQKKAKNYKGKDVKIMGTLDKTRNLIHVEKIEASPSI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077666

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences