Metagenome / Metatranscriptome Family F077653

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077653
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	147 residues
Representative Sequence	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEH
Number of Associated Samples	92
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.55 %
% of genes near scaffold ends (potentially truncated)	92.31 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.017 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.966 % of family members)
Environment Ontology (ENVO)	Unclassified (53.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.684 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.56% β-sheet: 10.11% Coil/Unstructured: 39.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13488	Gly-zipper_Omp	37.61
PF13441	Gly-zipper_YMGG	34.19
PF04519	Bactofilin	5.13
PF00353	HemolysinCabind	0.85
PF01590	GAF	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	5.13

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.02 %
Unclassified	root	N/A	5.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.02 %
Unclassified	root	N/A	5.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.02 %
Unclassified	root	N/A	5.98 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	78.63 %
Unclassified	root	N/A	5.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.71 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	78.63 %
Unclassified	root	N/A	5.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.71 %
Synergistia	class	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	17.95 %
Unclassified	root	N/A	5.98 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.71 %
Synergistales	order	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	17.95 %
Unclassified	root	N/A	5.98 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.71 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.85 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %
Synergistaceae	family	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	17.95 %
Unclassified	root	N/A	5.98 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.71 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Thermovirga	genus	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Thermovirga	0.85 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	17.95 %
Unclassified	root	N/A	5.98 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.71 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.85 %
Thermovirga lienii	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Thermovirga → Thermovirga lienii	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	17.95 %
Unclassified	root	N/A	5.98 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.71 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.85 %
Blastococcus saxobsidens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	0.85 %
Thermovirga lienii	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Thermovirga → Thermovirga lienii	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	17.95 %
Unclassified	root	N/A	5.98 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.71 %
Streptomyces sp. HGB0020	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. HGB0020	0.85 %
Blastococcus saxobsidens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	0.85 %
Thermovirga lienii	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Thermovirga → Thermovirga lienii	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_100980630	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1204	Open in IMG/M
3300004463\|Ga0063356_103247612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	701	Open in IMG/M
3300004480\|Ga0062592_101643026	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	622	Open in IMG/M
3300005327\|Ga0070658_10796575	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005328\|Ga0070676_10798760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	696	Open in IMG/M
3300005329\|Ga0070683_100216326	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300005331\|Ga0070670_101496545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	620	Open in IMG/M
3300005331\|Ga0070670_102168913	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	512	Open in IMG/M
3300005335\|Ga0070666_10238470	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300005335\|Ga0070666_11525402	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Thermovirga → Thermovirga lienii	500	Open in IMG/M
3300005339\|Ga0070660_100121942	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2081	Open in IMG/M
3300005344\|Ga0070661_100136256	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300005344\|Ga0070661_100919311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	723	Open in IMG/M
3300005345\|Ga0070692_10545574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	759	Open in IMG/M
3300005355\|Ga0070671_101066484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	709	Open in IMG/M
3300005364\|Ga0070673_100767031	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005364\|Ga0070673_101236465	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300005364\|Ga0070673_102163463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. HGB0020	528	Open in IMG/M
3300005457\|Ga0070662_101469536	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005457\|Ga0070662_101877853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	517	Open in IMG/M
3300005535\|Ga0070684_100721719	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005543\|Ga0070672_100097460	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300005564\|Ga0070664_100516191	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300005578\|Ga0068854_102135719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	517	Open in IMG/M
3300005616\|Ga0068852_100475593	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300005616\|Ga0068852_101206052	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005841\|Ga0068863_100438286	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300006173\|Ga0070716_101155556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	620	Open in IMG/M
3300006880\|Ga0075429_100679730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	902	Open in IMG/M
3300006881\|Ga0068865_101512443	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	602	Open in IMG/M
3300007004\|Ga0079218_10423734	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1144	Open in IMG/M
3300009098\|Ga0105245_11735248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	677	Open in IMG/M
3300009148\|Ga0105243_11682343	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	663	Open in IMG/M
3300009551\|Ga0105238_12493583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	553	Open in IMG/M
3300009789\|Ga0126307_11770070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	502	Open in IMG/M
3300009840\|Ga0126313_10099258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2138	Open in IMG/M
3300010036\|Ga0126305_10747700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	663	Open in IMG/M
3300010036\|Ga0126305_10792184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	644	Open in IMG/M
3300010037\|Ga0126304_11055350	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	555	Open in IMG/M
3300010039\|Ga0126309_10373428	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	846	Open in IMG/M
3300010039\|Ga0126309_11034457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	554	Open in IMG/M
3300010040\|Ga0126308_10345281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	985	Open in IMG/M
3300010041\|Ga0126312_10888505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	649	Open in IMG/M
3300010044\|Ga0126310_11104641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	631	Open in IMG/M
3300010044\|Ga0126310_11218955	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	605	Open in IMG/M
3300010154\|Ga0127503_10023732	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1079	Open in IMG/M
3300011119\|Ga0105246_11913179	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300011332\|Ga0126317_10087621	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	893	Open in IMG/M
3300011333\|Ga0127502_10929348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	640	Open in IMG/M
3300012212\|Ga0150985_113139977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1239	Open in IMG/M
3300012212\|Ga0150985_115364546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1046	Open in IMG/M
3300012212\|Ga0150985_120063616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	866	Open in IMG/M
3300012469\|Ga0150984_117720922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	920	Open in IMG/M
3300012469\|Ga0150984_119746941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1034	Open in IMG/M
3300012984\|Ga0164309_11747289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	534	Open in IMG/M
3300012985\|Ga0164308_11011375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	739	Open in IMG/M
3300012988\|Ga0164306_10905571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	719	Open in IMG/M
3300013105\|Ga0157369_10721653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1026	Open in IMG/M
3300013296\|Ga0157374_12379743	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	557	Open in IMG/M
3300015201\|Ga0173478_10797709	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	518	Open in IMG/M
3300018469\|Ga0190270_12110391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	623	Open in IMG/M
3300018476\|Ga0190274_11975502	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	679	Open in IMG/M
3300018476\|Ga0190274_13339270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	541	Open in IMG/M
3300018920\|Ga0190273_10920910	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	710	Open in IMG/M
3300019361\|Ga0173482_10584152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	558	Open in IMG/M
3300020081\|Ga0206354_11035922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	930	Open in IMG/M
3300021415\|Ga0193694_1039363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	661	Open in IMG/M
3300025899\|Ga0207642_10889414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300025901\|Ga0207688_10207505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1176	Open in IMG/M
3300025909\|Ga0207705_10138618	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300025925\|Ga0207650_10511891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1004	Open in IMG/M
3300025926\|Ga0207659_10092121	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2265	Open in IMG/M
3300025927\|Ga0207687_10911604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	752	Open in IMG/M
3300025930\|Ga0207701_11710313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	503	Open in IMG/M
3300025931\|Ga0207644_10108435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2096	Open in IMG/M
3300025932\|Ga0207690_10226639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1433	Open in IMG/M
3300025933\|Ga0207706_10988414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	708	Open in IMG/M
3300025934\|Ga0207686_10895363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	716	Open in IMG/M
3300025940\|Ga0207691_11030149	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	686	Open in IMG/M
3300025941\|Ga0207711_11073199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	746	Open in IMG/M
3300025941\|Ga0207711_11893676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	539	Open in IMG/M
3300025944\|Ga0207661_11042546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	753	Open in IMG/M
3300025960\|Ga0207651_10191011	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300025972\|Ga0207668_11862189	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	543	Open in IMG/M
3300026041\|Ga0207639_10334821	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1348	Open in IMG/M
3300026095\|Ga0207676_11987230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	580	Open in IMG/M
3300027691\|Ga0209485_1331107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300028379\|Ga0268266_11775663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	592	Open in IMG/M
3300028381\|Ga0268264_11008870	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	839	Open in IMG/M
3300028710\|Ga0307322_10152836	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	615	Open in IMG/M
3300028754\|Ga0307297_10296431	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300028754\|Ga0307297_10337224	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	549	Open in IMG/M
3300028778\|Ga0307288_10498270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300031548\|Ga0307408_102457572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	506	Open in IMG/M
3300031731\|Ga0307405_11105929	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	681	Open in IMG/M
3300031903\|Ga0307407_10084498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1928	Open in IMG/M
3300031938\|Ga0308175_101354044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	793	Open in IMG/M
3300031938\|Ga0308175_102527864	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	575	Open in IMG/M
3300031939\|Ga0308174_10067399	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2473	Open in IMG/M
3300031939\|Ga0308174_11001537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	709	Open in IMG/M
3300031995\|Ga0307409_101444669	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	714	Open in IMG/M
3300031996\|Ga0308176_10238511	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1736	Open in IMG/M
3300031996\|Ga0308176_11967238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	624	Open in IMG/M
3300032000\|Ga0310903_10694792	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	549	Open in IMG/M
3300032002\|Ga0307416_101618607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	753	Open in IMG/M
3300032002\|Ga0307416_102650030	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	598	Open in IMG/M
3300032005\|Ga0307411_10775705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	842	Open in IMG/M
3300032126\|Ga0307415_100480986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1081	Open in IMG/M
3300032126\|Ga0307415_102189110	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	541	Open in IMG/M
3300032211\|Ga0310896_10590107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	619	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.97%
Environmental	Environmental	41.03%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.97%
Terrestrial	Environmental → Terrestrial	38.46%
Aquatic	Environmental → Aquatic	2.56%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	45.30%
Soil	Environmental → Terrestrial → Soil	38.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.68%
Freshwater	Environmental → Aquatic → Freshwater	2.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	27.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	4.27%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.56%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	27.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.27%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	11.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	10.26%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.42%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1009806302	3300004463	Arabidopsis Thaliana Rhizosphere	MSAPPPRELGGGEERIPNRRPADLPAPEGQALVEHLVDRLARTERELGLAREEIAESERERASLRSTTKQVAGSERVDFPELIRPFLPALGHWCLFDQVFNGRGERRLITPDASLAQLARSVE
Ga0063356_1032476121	3300004463	Arabidopsis Thaliana Rhizosphere	MSVPPPREVGGGEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGLAREEIAESERERASLRSTTRQVAGSERVDVAELIRPFLPALGQWCLFDQVYNGRGERRLVTPDPSLAQLARSVEGELALDGDASLGIVRALR
Ga0062592_1016430261	3300004480	Soil	MHAPPPREQGSEERLPSRRPADAPAPEGAALVEHLVDRLSHTERELSQAQEVTTVAERERSLLRSAARVVASAERVEVTEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARPVEGELALDGDASLGLVRALRRRRTERLEHVV
Ga0070658_107965752	3300005327	Corn Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLF
Ga0070676_107987601	3300005328	Miscanthus Rhizosphere	MRVPPPREQGGEERLPSRRPADMPAPEGAALVEHLVDRLSRTERELHQARDAVAEAERERVLLHDAAHLVASGEHFDPADLVRPFLPVLGHWCLLDRVANGHGERRLISPDTALEQGARSVEGELPLDGDASLGL
Ga0070683_1002163261	3300005329	Corn Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASSERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDAHASSAW
Ga0070670_1014965451	3300005331	Switchgrass Rhizosphere	MSAPPPREHGGAEERIPNRRPADLPAPEGQALVEYLVDRLSLTERELGIARERIAESERERVALHNATRHVASHERVEVGELVRPFLPALGQWCLF
Ga0070670_1021689131	3300005331	Switchgrass Rhizosphere	RLSRTERELNQARDAVADAERERVLLHDAARLVASGEHFDHADLVRPFLPALGHWCLLDRVANGHGERRLISPDTALEQGARSVEGEIPLDGDASLGLVRALRRRRSERLEHVSPTRPAALREGDPAAMAWKALERLVAGPVLVVPIAARGRIVGALSFGRPADQPLFNE
Ga0070666_102384702	3300005335	Switchgrass Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEH
Ga0070666_115254021	3300005335	Switchgrass Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRAL
Ga0070660_1001219424	3300005339	Corn Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRALRRRRAERLDHVAPSRPATHREDERAEAARTALEL
Ga0070661_1001362564	3300005344	Corn Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASSERVDAVELVRPFLPALGQWCLFDQ
Ga0070661_1009193112	3300005344	Corn Rhizosphere	MSAPPPREHGGAEERIPNRRPADLPAPEGQALVEYLVDRLALTERELGTARETIAESERERAALRNATRHVASHDRVEVGELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGE
Ga0070692_105455741	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRSFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRALRRRRAERLDHVVPSRPATAPDEDRGEAARTALDLLVAGPVLVVPISARGRIIGALSFGRA
Ga0070671_1010664841	3300005355	Switchgrass Rhizosphere	RRRDRQQRRHREEACPLVAPRRSMSAPPPRELGGGEERVPNRRPADLPAPEGQALVEHLVDRLARTERELSLAREEIAESERERASLRSTTRQVAGSEFVDFAELIRPFLPALGHWCLFDQVFNGRGERRLITPDASLAQLARSVEGELPLDGDASLGIVRALRRRRAERLDHVSPARPATVRDDARAASAWDALEHLAAGPVLVVPIMGRGRIVGALSFGRTADRPLFNEREQR
Ga0070673_1007670311	3300005364	Switchgrass Rhizosphere	MSAPPPREHGGAEERIPNRRPADLPAPEGQALVEHLVDRLARTERELSLARDQIAESERERASLRHAARQVASSERVDAADLVRPFLPALGQWCLFDQVFSGHGERRLI
Ga0070673_1012364651	3300005364	Switchgrass Rhizosphere	MSVPPPREHGGGEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGLARERIADSERERLSLRDATRQIASGERIDAADLIRPFLPALGQWCLFDQVFSGHGERRLITPDESLARLARSVEGELALDGDASLGIVRALRRRRAERLDHVVPVRPADMRGDADAPSAWAALERLAAGPV
Ga0070673_1021634631	3300005364	Switchgrass Rhizosphere	RPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDAHASSAWAALEHLAAGPVLVVPIMARGRIIGA
Ga0070663_1006012601	3300005455	Corn Rhizosphere	MRVPPPREQGDEERVPSRRPADVPAPEGTALVEHLVDRLSRTERELSQARDVVAVAERERSLLRSAARVVASAERVDVTEVVRPFLPTLGNWCLIDQVANGHGERRLAASDSELERRARAVEGDLALDGD
Ga0070662_1014695362	3300005457	Corn Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRALRRR
Ga0070662_1018778531	3300005457	Corn Rhizosphere	HLVDRLSRTERELNQARDAVADAERERVLLHDAARLVASGEHFDHADLVRPFLPALGHWCLLDRVANGHGERRLISPDTALEQGARSVEGEIPLDGDASLGLVRALRRRRSERLEHVSPTRPAALREGDPAAMAWKALERLVAGPVLVVPIAARGRIVGALSFGRPADQPL
Ga0070684_1007217192	3300005535	Corn Rhizosphere	MSAPPPREHGGSEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASSERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAE
Ga0070672_1000974601	3300005543	Miscanthus Rhizosphere	MRVPPPREQGGEDRVPSRRPADVPAPEGAALVEHLVERLSRTERELNQARDVVAAAERERGLLRNAARLVASGERVDATDVVRPFLPTLGNWCLIDQVTNGHGDRRLAASDSALEQRARAVEGELALDGDASLGLVRALRRRRAERLDHVVASRPDAHGESGKTDTELSALELLVA
Ga0070664_1003272654	3300005564	Corn Rhizosphere	MRVPPPREQGDEERVPSRRPADVPAPEGTALVEHLVDRLSRTERELSQARDVVAVAERERSLLRSAARVVASAERVDVTEVVRPFLPTLGNWCLIDQVANGHGERRLAASDSELERRARAVEGDLALDGDA
Ga0070664_1005161911	3300005564	Corn Rhizosphere	MSAPPPREHGGAEERIPNRRPADLPAPEGQALVEYLVDRLSLTERELGIARETIAESERERAALRNATRHVASHDRVEVGELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRR
Ga0068854_1021357191	3300005578	Corn Rhizosphere	RSMSAPPPRELGGGEERIPNRRPADLPAPEGQALVEHLVDRLARTERELSLAREEIAESERERASLRSTTRQVAGSEPVDFAELIRPFLPALGHWCLFDQVFNGRGERRLITPDASLAQLARSVEGELALDGDASLGIVRALRRRRAERLDHVSPARPATVRDDARAASAW
Ga0068852_1004755932	3300005616	Corn Rhizosphere	MRVPPPREQGGEERVPSRRPADVPAPEGAALVEHLVERLSRTERELNQARDVVAAAERERGLLRNAARLVASGERVDATDVVRPFLPTLGNWCLIDQVTNGHGDRRLAASDSALEQRARAVEGQLALDGDASLGLVRALRRRRAERLEHAVASRPEAQGESGKTDAEWRALELLVAGPLLIVPISARG
Ga0068852_1012060522	3300005616	Corn Rhizosphere	MHAPPPREQGSEERLPSRRPADAPAPEGAALVEHLVDRLSRTERELSQAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRALRRRRAERLDHVVPSRPATAPDEDRGEAARTALDLLVAGPVLVVPISARGRIIGAL
Ga0068863_1004382862	3300005841	Switchgrass Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRALRRRRAERLDHVVP
Ga0070716_1011555561	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PMRVPPPREQGSEERVPSRRPADVPAPEGAALVEHVVDKLARTERELNQARDAAAAGERERALLRSAARLVASSEGVDPTEVVRSFLPTLGHWCLIDQITNGHADRRLAASDSALEQRARSVEGELALDGDASLGLVRALRRRRAERLEHGVASRTESHGESDKTDAARSALELLVAGPLLIVPISARARIIGALTFGRPADHPVF
Ga0075429_1006797301	3300006880	Populus Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASSERVDAVELVRPFLPTLGQWCLFDQVFSGHGERRLITPDPSLAQLARSVE
Ga0068865_1015124431	3300006881	Miscanthus Rhizosphere	MSAPPPRELGGGEERVPNRRPADLPGPEGQALVEHLVDRLARTERELGLARQEIAESERERASLRSTTRQVAGSEPVDFAELIRPFLPALGHWCLFDQVFNGRGERRLITPDASLAQLARSVEGELALDGDASLGIVRALRRRRAERLDHVSPARPATVRDDAPAAVAWEALEHLAA
Ga0079218_104237342	3300007004	Agricultural Soil	MSVPPPREHGGEEERIPNRRPADLPAPEGQALVEHLVDRLARAERELNHARDQIAESERERTFLRNATRQVASTDRVEPAELVRPFLPALGQWCLFDQVFNGHGERHLITPDAALAQHARSVEGMLALDGDASLG
Ga0105245_117352482	3300009098	Miscanthus Rhizosphere	LSHEREVVAGAERERTLLRSAARFVVSAERVNATDVVRPFLPTLGNWCLIDQVTNGHADRRLAASDSALEERARAVEGEIALDGDASLGLVRALRRRRAERLEHVVPSHRAAP
Ga0105243_116823432	3300009148	Miscanthus Rhizosphere	MPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSIAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAP
Ga0105238_124935831	3300009551	Corn Rhizosphere	LSHEREVVAGAERERTLLRSAARFVVSAERVNATDVVRPFLPTLGNWCLIDQVTNGHADRRLAASDSALEERARAVEGEIALDGDASLGLVRALRRRRAERLEHV
Ga0126307_117700701	3300009789	Serpentine Soil	VEHLVDRLARAERELNLARDVITESERERAFLRNATRQVASTEHVDAVELVRPFLPALGHWCLFDQVFNGIAERRLITADASLAQQARSVEGELALDGDASLGLVRALRRRRTERLEHVSPVRPATVRDDDHAAA
Ga0126313_100992581	3300009840	Serpentine Soil	MSVPPPQEYGGGEERIPNRRPADLPAPEGQTLVEHLVDRIASTERELNLARDLIAQSERERASLRNATRQVATNERTDAAELVRPFLPALGQWCLFDQVFNGRGERRLITPDPSLAQLARSVEGELALDGDASLGLVRALRRRRAERLEHVSPARPIAVRDDAQASSTWTALEHLAAGPVLVVPV
Ga0126305_107477002	3300010036	Serpentine Soil	MSAPPPRELGGGEERVPNRRPADLPAPEGQALVEHLVDRLARTERELSLAREEIAESERERASLRSTTRQVAGSERVDFAELIRPFLPALGQWCLFDQVYNGRGERRLITPDASLAQLARSVEGELALDRGEGAELIRRDVAEACI
Ga0126305_107921842	3300010036	Serpentine Soil	LPAPDGQALVEHLVDRLARAERELNLARDLVADSERDRAFLRNATRQVASTEQVDAGELVRPFLPALGQWCLFDQVFNGIAERRLITADASIAQQARSVEGELALDGDASLGLVRALRRRRT
Ga0126304_110553501	3300010037	Serpentine Soil	MPAPEGQALVEHLVDRLARTERELSLAREEIAESERERASLRSTTRQVAGSERVDFAELIRPFLPALGHWCLFDQVFNGRGERRLITPDASLAQLARSVEGELALDGDASLGIVRALRRRRAERLDHVSPARPATVRDDVRTSSTWDALELLAAG
Ga0126309_103734281	3300010039	Serpentine Soil	LPAPDGQALVEHLVERLARAERELNLARDVITESERERTFLRNATRQVASTEHVDAGELVRPFLPALGHWCLFDQVFNGIGERRLITADASLAQEARSVEGELALDGDASLGLVRALRRRRTERLEHVSPVRPATLRDDDHAAAAWAALEDLAAGPVLVVPI
Ga0126309_110344571	3300010039	Serpentine Soil	EQGGGEERASIRRPADLPAPDGQALVEHLVDRLARTERELNQARDTIAESERERAILHNATRQVASAERVDATELVRPFLPALGQWCLFDQVFNGIGERRLITADASLAREARSVEGELALDGDASLGLVRALRRRRAERLAHVSPLRPPALRDDDHAAAAWAALEHLAAGPVLVVPILARTRI
Ga0126308_103452812	3300010040	Serpentine Soil	MSAPPPRELGGGEERIPNRRPADLPAPEGQALVEHLVDRLARTERELSVAREEIAESERERASLRSTTRQVAGSERVDFVELIRPFLPALGQWCLFDQVHNGRG
Ga0126312_108885052	3300010041	Serpentine Soil	LPAPDGQALVEHLVDRLARAERELNLARDVITESERERTFLRNATRQVASTEHVDAGELVRPFLPALGHWCLFDQVFNGIAERRLVAADASLAQEARSVEGELALDGDASLGLVRALRRRRTERLEHVS
Ga0126310_111046411	3300010044	Serpentine Soil	MSVPPPREQGGEERAPARRPADLPAPDGQALVEHLVDRLARTERELSVAREIIAESERERVFLRQATRQVASGEHLDACELVRPFLPALGQWCLFDQVLNGVGERRL
Ga0126310_112189551	3300010044	Serpentine Soil	MPEPEGAALVEHLVDRLARTERELNQARDAVADAERERTLLRSATRIVSSAERVDPTDLVRPFLPALGHWCLFDQVANGHGERRLVSPDSSLASVAGSIEGELALDGDASLGLVRALRRRRAERLEHVTPMRPATIREGDPAAAAWAALERLAAGPVLVV
Ga0127503_100237322	3300010154	Soil	MRAPPPREQGNEERVPSRRPADTPAPEGAALVEHLVDRLSRTERELNQAWDEVAGAERERTMLLSAARTVVSADQVDAADVVRPFLPTLGLWCLVDQITNGHAERRLISSDAALTQGARSVDGDLALDGDASLGLVRALRRRRAERLDHVLLTRPATLRADDPAAAAWTALEQLVGGPVLVV
Ga0134121_106971492	3300010401	Terrestrial Soil	MRVPPPREQGGEERVPSRRPADVPAPEGAALVDHLVERLSRTERELSHEREAVAGAERERTLLRSAARFVVSAERVNATDVVRPFLPTLGNWCLIDQVTNGHADRRLAASDSALRLDENLPEAAFNRALV
Ga0105246_119131791	3300011119	Miscanthus Rhizosphere	MPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDAHASSAWAALEHLAAGPVLVVPIM
Ga0126317_100876212	3300011332	Soil	MSAPPPRELGGGEERVPNRRPADLPAPEGQALVEHLVDRLARTERELRLAREEIAESERERASLRSTTRQVAGSERVDFAELIRPFLPALGHWCLFDQVFNGRGERRLITPDASLAQLA
Ga0127502_109293481	3300011333	Soil	MSVPPPREHGGGEERVPNRRPADLPAPEGQALVEHLVDRLARAERELNVARDAIAESERERAFLRNAARHVASADRVDPLELLRPFLPALGQWCLFDQVFNGHGERHLVTPDPSLAHHAGAVEGVLALDGDASLGIVRALR
Ga0150985_1131399771	3300012212	Avena Fatua Rhizosphere	MPAPEGAALVEHLVDRLSRTERELNQARDAVAEAERERVLLHDAARLVASAEHFDPADLVRPFLPVLGDWCLLDRVANGHGERRLISPDTALEQGARSVEGDLPLDGDASLGLVRALRRRRSERLEHVSPTRPAALREGEPAAAAWRALER
Ga0150985_1153645462	3300012212	Avena Fatua Rhizosphere	MPAPEGAALVEHLVDRLARTERELSQARDAVAGAERERTLLRSATRFVASAERVDAADIVRPFLPTLGHWCLIDQIANGHGERRMVSSDSALEHGAHSVEGELALDGDASLGLVRALRRRRVERLD
Ga0150985_1200636162	3300012212	Avena Fatua Rhizosphere	MPAPEGAALVEHLVDRLSRTEREVSQAREVVAVAERERSLLRSASRLVASAERVEMTEVVRPFLPTLGNWCLIDQVSNGHGERRLAASDSALEDRARAVEGKLALDGDASLGLVRALRRRRSERLDHVELSHPVVHRDGEHADPALSALELLK
Ga0150984_1177209221	3300012469	Avena Fatua Rhizosphere	MSAPPPRELGGGEERVPIRRPADLPAPEGQALVEHLVDRLARTERELGFARDLIAEAESERVSLRKATRLVASGEPVDAAELIRPFLPALGQWCLFDQVFNGVGERRLVAADLSL
Ga0150984_1197469411	3300012469	Avena Fatua Rhizosphere	MHAPPPREQGSEERLPSRRPADAPAPEGAALVEHLVDRLSRTERELSQAQEVTTVAERERSLLRSAARVVASAQRVEVTEVVRSFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARPVEGELALDGDASLGLVRALRRRRTE
Ga0164309_117472891	3300012984	Soil	VPAPEGAALVEHLVERLSRTERELNQARDVVAAAERERGLLRNAARLVASGERVDATDVVRPFLPTLGNWCLIDQVTNGHGDRRLAASDSALEQRARAVEGELALDGDASLGLVRALRRRRAERLEHVVASRPDAHGESGKTDAEWS
Ga0164308_110113751	3300012985	Soil	LSHEREVVAGAERERTLLRSAARFVVSAERVNATDVVRPFLPTLGNWCLIDQVTNGHADRRLAASDSALEERARAVEGEIALDGDASLGLVRALRRRRAERLEH
Ga0164306_109055711	3300012988	Soil	VHAPPPREQGSEERLPSRRPADSPAPEGAALVEHLVDRLSRTERELSQAQEMTTVAERERSLLRSAARVVASADRVDVTEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGDLALDGDASLGL
Ga0157369_107216532	3300013105	Corn Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRALR
Ga0157374_123797431	3300013296	Miscanthus Rhizosphere	MSAPPPREHGGAEERIPNRRPADLPAPEGQALVEYLVDRLSLTERELGIARERIAESERERVALHNATRHVASHERVEVGELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGVVRALRRRRAERLEHVSPVRPANARDDSAAPSAWAAL
Ga0173478_107977091	3300015201	Soil	VEHLVDRLARTERELGIARETIAETERERASLRNATRQLASNERVDAVELVRPFLPSLGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGVVRALRRRRAERLEHVSPT
Ga0132256_1022184812	3300015372	Arabidopsis Rhizosphere	MRVPPPREQGGEERVPSRRPADVPAPEGAPLVDHLVDRLSRAERELSQEREEVAGAERERTLLRSAARFVVSAERVNATDVVRPFLPTLGNWCLIDQITNGHADRRLAASDSALEERARAVEGEIALDGDAS
Ga0190270_121103911	3300018469	Soil	MSVPPPREQGGEERVPHRRPADLPAPEGQALVEHLVDRLARTERELRHAREEIDESERERASLRNTTRQVASAERVDAVELVRPFLPALGQWCLFDQVFNGRGERRLITPDASLAQLARSVEGELALDGDASLGIVRALRRRRAERLDHVS
Ga0190274_119755021	3300018476	Soil	MRVPPPREQGGGEERVPSRRPADLPAPEGAALVEHLVERLARTERELNLARDAVAESERARALLRHAARQVAGAETIDPADLIRPFLPALGQWCLLDQVANGRGERRLVTPDASLAEVARSVEGGLSLDGDAS
Ga0190274_133392701	3300018476	Soil	MSAPPPRELGGGEERVPNRRPADLPAPEGQALVEHLVDRLARTERELSLAREEIAESERERASLRSTTRQVAGSEPVDFAELIRPFLPALGQWCLFDQ
Ga0190273_109209101	3300018920	Soil	MSAPPPREQGGGEERASIRRPADLPAPEGQALVEHLVDRLARTERELNHARDTIAESERERAILHNATRQVASAERVDATELVRPFLPALGQWCLFDQVFNGIGERRLITADA
Ga0173482_105841521	3300019361	Soil	VSAPPPREHGGAEERVSNRRPADLPAPEGQALVEHLVDRLARTERELGIARETIAETERERASLRNATRQLASNERVDPVELVRPFLPSLGQWCLFDQVFSGHGERRLITPDPSLAQLARSVE
Ga0206354_110359221	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPPPREQGDEERVPSRRPADVPAPEGTALVEHLVDRLSRTERELSQARDVVAVAERERSMLRSAARVVASAERVDVTEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARPVEGELAFDGDASLGLVQALRRRR
Ga0193694_10393631	3300021415	Soil	MSVPPPREFGGGEERIPTRRPAELSQARDQIAESERERASLGHATRQVALSERVDVADLVRPFLPALGQWCLFDQVFSGHGERRLITPDASLAQLAHSVEGELALDGDASLGIVRALRRRRAER
Ga0207642_108894141	3300025899	Miscanthus Rhizosphere	VSAPPPREHGGAEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARETIAETERERASLRNATRQLASNERVDAVELVRPFLPSLGQWCLFDQVFSGHGERRLITPDPSL
Ga0207688_102075051	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAELERERASLRNAARQVASSERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDAHASS
Ga0207705_101386183	3300025909	Corn Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARPVEGELALDGDASLGLVRALRRRRTERLEHVVPSRPATHREDDRIEAARTALELLVAGPVLVVPISARGRIIGALSFGRTADQPIFDDRE
Ga0207650_105118912	3300025925	Switchgrass Rhizosphere	MSAPPPREHGGAEERIPNRRPADLPAPEGQALVEYLVDRLSLTERELGIARETIAESERERAALRNATRHVASHDRVEVGELVRPFLPALGQWCLFDQVFSGHGERRLITPDS
Ga0207659_100921214	3300025926	Miscanthus Rhizosphere	MPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAA
Ga0207687_109116041	3300025927	Miscanthus Rhizosphere	MSAPPPREHGGSEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDAHASSAWAALEHLAAGPVLVVPIMARGRIIGA
Ga0207687_117642901	3300025927	Miscanthus Rhizosphere	MRVPPPREQGGEERVPSRRPADVPAPEGAALVDHLVERLSRTERELSHEREVVAGAERERTLLRSAARFVVSAERVNATDVVRPFLPTLGNWCLIDQVTNGHADRRLAASDSALEERARAVEGEIAL
Ga0207701_117103131	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPPPREHGGSEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLIT
Ga0207644_101084351	3300025931	Switchgrass Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEG
Ga0207690_102266392	3300025932	Corn Rhizosphere	MPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLARLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDAHASSAWAALEHLAAGPVLVVPIMARGRIIGALS
Ga0207706_109884142	3300025933	Corn Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRALRRRRAERL
Ga0207686_108953632	3300025934	Miscanthus Rhizosphere	VSAPPPREHGGAEERIPNRRPADLPAPEGQALVEHLVDRLARTERELGIARETIAETERERASLRNATRQLASNERVDAVELVRPFLPSLGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGVVRALR
Ga0207691_110301491	3300025940	Miscanthus Rhizosphere	MSAPPPRELGGGEERVPNRRPADLPAPEGQALVEHLVDRLARTERELSLAREEIAESERERASLRSTTRQVAGSEPVDFAELIRPFLPALGHW
Ga0207711_110731991	3300025941	Switchgrass Rhizosphere	MRVPPPREQGGEDRVPSRRPADVPAPEGAALVEHLVERLSRTERELNQARDVVAAAERERGLLRNAARLVASGERVDATDVVRPFLPTLGNWCLIDQVTNGHGDRRLAASDSALEQRARAVEGQLALDGDASLGLVRALRRRRAERLEHAVASRPEAQGESGKTDAERSALELLVAGPLLIVPISARILGRPEPETCLAYLLDSRDAPTTGSPLVPDVSQQRAVAGH
Ga0207711_118936762	3300025941	Switchgrass Rhizosphere	MSAPPPREHGGSEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGD
Ga0207661_110425462	3300025944	Corn Rhizosphere	MSAPPPREHGGSEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASSERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDAHASSAWSALEHLAAGPVLVVPIMTR
Ga0207651_101910111	3300025960	Switchgrass Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDAHASSAWAALEHLAAGPVLVVPIMARGRIIGALSFGRASD
Ga0207668_118621892	3300025972	Switchgrass Rhizosphere	MSAPPPRELGGGEERIPNRRPADLPAPEGQALVEHLVDRLARTERELGLAREEIAESERERASLRSTTRQVAGSEPVDFAELIRPFLPALGHWCLFDQVFNGRGERRLITPDASLAQLARSVEGELA
Ga0207639_103348213	3300026041	Corn Rhizosphere	MRVPPPREQGSEERLPSRRPADTPAPEGAALVEHLVDRLSRTERELSLAQEVTTVAERERSLLRSAARVVASAERVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELALDGDASLGLVRALRRRRAERLDHVAPSRPATHREDERAEAARTALEL
Ga0207676_119872302	3300026095	Switchgrass Rhizosphere	MSAPPPREHGGSEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHG
Ga0207698_121293082	3300026142	Corn Rhizosphere	MHAPPPREQGSEERLPSRRPADAPAPEGAALVEHLVDRLSRTERELSQAQEVTTVAERERSLLRSAARVVASADRVDVAEVVRPFLPTLGNWCLIDQVTNGHGERRLAASDSALEQRARSVEGELA
Ga0209485_13311071	3300027691	Agricultural Soil	MSVPPPREHGGEEERILNRRPADLPAPEGQALVEHLVDRLARAERELNHARDQIAESERERTFLRNATRQVASTDRVEPAELVRPFLPALGQWCLFDQVFNGHGERHLITPDAALAQHARSVEGMLALDGDASLGIVRALRRRRAERLEHVSPVRPATPRD
Ga0268266_117756631	3300028379	Switchgrass Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSIAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPAPPAAVRDDGITTPSTARGDHMGLLRNRGPAGTRYTMREKLFSI
Ga0268264_110088701	3300028381	Switchgrass Rhizosphere	MSAPPPREHGGSEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLAQLARSV
Ga0307322_101528361	3300028710	Soil	MSAPPPRELGGGEERVPNRRPADLPAPEGQALVEHLVDRLARTERELGLARDALAESERDRTSLRNTTRQVASGERVDAAELVRPFLPALGQWCLFDQVSNGRGERRLITADASLAELAHSVEGELALDGDASLGI
Ga0307297_102964311	3300028754	Soil	MSAPPPREHGGAEERIPNRRPADLPAPEGQALVEYLVDRLALTERELGTARETIAESERERAALRNATRHVASHERVEVGELVRPFLPALGHWCLFDQVFSGHGERRLITPDPSLAQLARSVEGELALDGDASLGIVRALRRRRAERLEHVSPV
Ga0307297_103372242	3300028754	Soil	MSAPPPRELGGGEERVSNRRPADLPAPEGQALVEHLVDRLARTERELGLARDALAESERDRTSLRNTTRQVASGERVDAAELVRPFLPALGQWCLFDQVSNGRGERRLITPDAS
Ga0307288_104982701	3300028778	Soil	MSAPPPREQGGGEERASIRRPADLPAPDGQALVEHLVDRLASTERELNHARDTIADSERERAILRNATRQVASAERLDATELVRPFLPALGEWCLFDQVF
Ga0307408_1024575721	3300031548	Rhizosphere	PPPREHGGGEERSPIRRPADLPAPEGQALVEHLVDRLARTEGELRAARDQIADAERERGILRQATRQLAGVEPVDPPELLRPFLPALGHWCLFDQVFNGHGERRLVTADASLAQQASLLEGELALDGDASLGIVRALRRRRAERLEHVEPTRPAALRGDEQGAAAWAA
Ga0307405_111059291	3300031731	Rhizosphere	MPAPEGQALVEHLVDRLARTERELSVAREQIAESERERTVLRNAARQVASAERVEPTELVRPFLPALGQWCLFDQVFGGQGERRLITSDPSLAQEARSVEGALALDGDASLGIVRALRRRRTESLEHVTPARPAAPRDDDRAASAWETLGHLAAGPVLVVPILARGRITGALSFGRPADHPLFGDREQRLAE
Ga0307407_100844984	3300031903	Rhizosphere	MSVPPPREHGGGEERVPNRRPADLPAPEGQALVEHLVDRLARAERELNVARDAIAESERERAFLRNAARHVASADRVDPLELLRPFLPALGQWCLFDQVFNGHGERHLVTPDPSLAHHAGVVEGVLALDGDASLGIVRALRRRRAERLDHASPERPKAQRDDDQASAAYEVLAQLAAGPVLVVPIMAR
Ga0308175_1013540441	3300031938	Soil	MRVPPPREQGEEERVPSRRPVDVPAPEGAALVEHLVDRLSRTERELTQARDGVAVAERERSLLRGAARLVASAERVDVTDVVRPFLPTLGNWCLVDQVANGHGERRLVASDAALARRARSVEGELALDGDASLGLVRALRRRG
Ga0308175_1025278641	3300031938	Soil	DRQQRRHPEEACSLAASTRSMSVPPPREHGGGEERIPNRRAADLPAPEGQALVEHLVDRLARTERELNLAREQIAESERERASLRHAARQVASSERVDVAELVRPFLPALGQWCLFDQVMSGHGERRLITPDASLAQLAHSLEGELALDGDASLGIVRALRRRRAERLEHVTPTRPAVERDDLHASSAWAA
Ga0308174_100673991	3300031939	Soil	MSVPPPREHGGGEERIPNRRPADMPTPDGQALVEHLVDRLARTERELSVARDQIAESERDRASLRHATRQVASSERVDAADLIRPFLPVLGQWCLFDQVFSGHGERRLITPDTSLAQLAHSLEGELALDGDASLGIVRALRRRRAERLEHVTPARPAVERDDLHASSAWAALEHLAAGPVLVVPVTARGRIVGALSFGRAADLPLFNEREQRL
Ga0308174_104909322	3300031939	Soil	MRVPPPREQGGEERVPSRRPADVPAPEGAALVEHLVDRLAHTERELSQTREVVAVAERERSLLRSAARTVASADRVDVTDVVRPFLPTLGNWCLIDQVTNGQGERRLAASDSALEQRARSVEGAFALDGDAS
Ga0308174_110015372	3300031939	Soil	MSVPPPREHGGGEERVSNRRPADMPAPDGQALVEHLVDRLARTERELSQARDQIAESERERASLRHATRQVAGSERVEAAELVRPFLPALGQWCLFDQVFSGHGERRLITPDASLAQLAHSVEGELALDGDASLGIVRALRRRRAERLEHVSPARPAAERDDLHETSAWAALEHLAAGPVLVVPVTARGRIVGALSFGR
Ga0307409_1014446691	3300031995	Rhizosphere	MSVPPPREHGGGEERVPNRRPADLPAPEGQALVEHLVDRLARAERELNVARDAIAESERERAFLRNAARHVASADRVDPIELLRPFLPALGQWCLFDQVFNGH
Ga0308176_102385113	3300031996	Soil	MRVPPPREQGGEERVPSRRPADVPAPEGAALVEHLVERLSRTERELNQARDVVAAAERERGLLRNAARVVASAERVDATDVVRPFLPTLGNWCLIDQITNGHGDRRLAASDSALEQRARAVEGELALDGDASLGLVRALRRRRAERLDHVVASRPDAHG
Ga0308176_119672381	3300031996	Soil	MRVPPPREQGEEERVPSRRPVDVPAPEGAALVEHLVDRLSRTERELTQARDGVAVAERERSLLRGAARLVASAERVDVTDVVRPFLPTLGNWCLVDQVANGHGERRLVASDAALERRARSVEGELALDGDASLGLVRALRRRGAERLEHVVSSHPAPPRDDEHVEAARRALDLLVAGPVLVVPISARGRIIGALS
Ga0310903_106947921	3300032000	Soil	MSAPPPREHGGSEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLARLARSVEGELALDGDASLGIVRALRRRRAERLEHV
Ga0307416_1016186072	3300032002	Rhizosphere	MSVPPPRELGGEERVPNRRPADLPAPEGQALVEHLVDRLARTERELSLAREEIAESERERVSLRNTTRQVASSERADPVELVRPFLPALGQWCLFDQVANGRGERRLITPDASIAQLARSVEGELALDGDASLGIVRALRRRRAERLDHVSPA
Ga0307416_1026500301	3300032002	Rhizosphere	MSVPPPREHGGGEERVPNRRPADLPAPEGQALVEHLVDRLARAERELNVARDAIAESERERAFLRNAARHVASADRVDPLELLRPFLPALGQWC
Ga0307411_107757052	3300032005	Rhizosphere	MPAPEGQALVEHLVDRLARTERELSVAREQIAESERERTVLRNAARQVASAERVEPTELVRPFLPALGQWCLFDQVFGGQGERRLITSDPSLAQEARSVEGALALDGDASLGIVRALRRRRTESLEHVTPARPAAPRDDDRAASAWETLGHLAAGPVLVVPILARGRITGALSFGRPADHPLFGDREQRLA
Ga0307415_1004809861	3300032126	Rhizosphere	MPAPEGQALVEHLVDRLARTERELSVAREQIAESERERTVLRNAARQVASAERVEPTELVRPFLPALGQWCLFDQVFGGQGERRLITSDPSLAQEARSVEGALALDGDASLGIVRALRRRRTESLEHVTPARPAAPRDDDRAASAWET
Ga0307415_1021891101	3300032126	Rhizosphere	MSVPPPREHGGGEERVPNRRPADLPAPEGQALVEHLVDRLARAERELNVARDAIAESERERAFLRNAARHVASADRVDPLELLRPFLPALGQWCLFDQVFNGHGERHLVTPDPSLAHHAGVVEGVLALDGDASLGIVRALRRR
Ga0310896_105901072	3300032211	Soil	MSAPPPREHGGSEERVPNRRPADMPAPEGQALVEHLVDRLARTERELGIARQTIAESERERASLRNAARQVASNERVDAVELVRPFLPALGQWCLFDQVFSGHGERRLITPDPSLARLARSVEGELALDGDASLGIVRALR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077653

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences