Metagenome Family F077644

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077644
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	102 residues
Representative Sequence	REIAAQVKVATDEQSQAGRGITAALEKIADDARAMRDSLERQLRETDRIADASRTMLDIAQENDAIAREFNATVQNLVASGKEFESEVARFRLSVVK
Number of Associated Samples	102
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.71 %
% of genes near scaffold ends (potentially truncated)	98.29 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.581 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.094 % of family members)
Environment Ontology (ENVO)	Unclassified (35.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.137 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 76.00% β-sheet: 0.00% Coil/Unstructured: 24.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF12732	YtxH	5.13
PF14534	DUF4440	4.27
PF01833	TIG	3.42
PF02080	TrkA_C	2.56
PF03992	ABM	2.56
PF03807	F420_oxidored	2.56
PF01161	PBP	1.71
PF12281	NTP_transf_8	1.71
PF02254	TrkA_N	1.71
PF00831	Ribosomal_L29	0.85
PF12833	HTH_18	0.85
PF09650	PHA_gran_rgn	0.85
PF01551	Peptidase_M23	0.85
PF00076	RRM_1	0.85
PF08695	Coa1	0.85
PF00665	rve	0.85
PF13594	Obsolete Pfam Family	0.85
PF01609	DDE_Tnp_1	0.85
PF13186	SPASM	0.85
PF14367	DUF4411	0.85
PF13026	DUF3887	0.85
PF00072	Response_reg	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.71
COG0255	Ribosomal protein L29	Translation, ribosomal structure and biogenesis [J]	0.85
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.85
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.85
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.85
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.85
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.85
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.85
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.85
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.85
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	70.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.40 %
Unclassified	root	N/A	3.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	70.94 %
Unclassified	root	N/A	3.42 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.56 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.94 %
Unclassified	root	N/A	3.42 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.71 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.94 %
Unclassified	root	N/A	3.42 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	1.71 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	1.71 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.94 %
Unclassified	root	N/A	3.42 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	1.71 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	1.71 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.85 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.94 %
Unclassified	root	N/A	3.42 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1.71 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	1.71 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.85 %
Pseudorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Pseudorhizobium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.94 %
Unclassified	root	N/A	3.42 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	1.71 %
Pseudorhizobium marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Pseudorhizobium → Pseudorhizobium marinum	0.85 %
Geobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter soli	0.85 %
Actinomadura atramentaria	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura atramentaria	0.85 %
Geobacter sulfurreducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter sulfurreducens	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_3233969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300001991\|JGI24743J22301_10046232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300004071\|Ga0055486_10054871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300004081\|Ga0063454_100005692	All Organisms → cellular organisms → Bacteria → Proteobacteria	2888	Open in IMG/M
3300004156\|Ga0062589_102636852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter sulfurreducens	522	Open in IMG/M
3300005093\|Ga0062594_100822086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300005093\|Ga0062594_103218181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300005177\|Ga0066690_10010160	All Organisms → cellular organisms → Bacteria	4771	Open in IMG/M
3300005294\|Ga0065705_10396939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300005328\|Ga0070676_11344094	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005329\|Ga0070683_100553319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300005331\|Ga0070670_100265738	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300005333\|Ga0070677_10017407	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300005338\|Ga0068868_102194707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005439\|Ga0070711_101981921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300005446\|Ga0066686_10165770	All Organisms → cellular organisms → Bacteria → Proteobacteria	1467	Open in IMG/M
3300005459\|Ga0068867_102030921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005468\|Ga0070707_100836109	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005471\|Ga0070698_102200858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura atramentaria	505	Open in IMG/M
3300005536\|Ga0070697_100340717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300005536\|Ga0070697_100597685	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300005536\|Ga0070697_101697324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300005540\|Ga0066697_10206800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300005545\|Ga0070695_100736969	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300005549\|Ga0070704_100672946	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005557\|Ga0066704_10145685	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300005559\|Ga0066700_10426095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300005578\|Ga0068854_100659769	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300005842\|Ga0068858_100002125	All Organisms → cellular organisms → Bacteria	20087	Open in IMG/M
3300005897\|Ga0075281_1002808	Not Available	2033	Open in IMG/M
3300006028\|Ga0070717_11764448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300006028\|Ga0070717_11852719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Pseudorhizobium → Pseudorhizobium marinum	545	Open in IMG/M
3300006034\|Ga0066656_10753539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300006173\|Ga0070716_101460691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300006642\|Ga0075521_10494111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300006794\|Ga0066658_10482788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300006797\|Ga0066659_11068072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300006804\|Ga0079221_10684713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300006871\|Ga0075434_101211850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300006876\|Ga0079217_10449553	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300006881\|Ga0068865_101345005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300006894\|Ga0079215_11567804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300006904\|Ga0075424_102703676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300006918\|Ga0079216_11396664	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300007004\|Ga0079218_12008749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300007004\|Ga0079218_12890840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300007255\|Ga0099791_10616554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300009012\|Ga0066710_100413867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2013	Open in IMG/M
3300009012\|Ga0066710_103283413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	618	Open in IMG/M
3300009012\|Ga0066710_104881542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300009038\|Ga0099829_10286602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1348	Open in IMG/M
3300009088\|Ga0099830_11158218	Not Available	641	Open in IMG/M
3300009089\|Ga0099828_10309674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1421	Open in IMG/M
3300009090\|Ga0099827_11556249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300009090\|Ga0099827_11592379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter soli	569	Open in IMG/M
3300009100\|Ga0075418_10098133	All Organisms → cellular organisms → Bacteria	3112	Open in IMG/M
3300009137\|Ga0066709_102815683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300009147\|Ga0114129_11022922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300010400\|Ga0134122_12934757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010401\|Ga0134121_12903925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300011269\|Ga0137392_10250118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1459	Open in IMG/M
3300011270\|Ga0137391_11548293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300011427\|Ga0137448_1000225	All Organisms → cellular organisms → Bacteria	6951	Open in IMG/M
3300011442\|Ga0137437_1273599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300012096\|Ga0137389_10401759	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300012096\|Ga0137389_10933374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300012096\|Ga0137389_11224730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300012096\|Ga0137389_11650612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012200\|Ga0137382_11356527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300012207\|Ga0137381_10940303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300012212\|Ga0150985_104897363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300012285\|Ga0137370_11039719	Not Available	503	Open in IMG/M
3300012350\|Ga0137372_11004741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012351\|Ga0137386_11212824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012925\|Ga0137419_10138127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1744	Open in IMG/M
3300013297\|Ga0157378_10485055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1232	Open in IMG/M
3300013307\|Ga0157372_13262876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300013764\|Ga0120111_1161476	Not Available	507	Open in IMG/M
3300014487\|Ga0182000_10564497	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300014498\|Ga0182019_11251538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300015252\|Ga0180075_1025716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300015374\|Ga0132255_105378601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300018433\|Ga0066667_10533930	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300018466\|Ga0190268_11854071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300018466\|Ga0190268_12325074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300018468\|Ga0066662_10371466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300021088\|Ga0210404_10826916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300021384\|Ga0213876_10111326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1453	Open in IMG/M
3300023021\|Ga0233354_112338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300024219\|Ga0247665_1054101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300024275\|Ga0247674_1023978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300024330\|Ga0137417_1212945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	901	Open in IMG/M
3300025604\|Ga0207930_1132451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300025925\|Ga0207650_10075681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2541	Open in IMG/M
3300025932\|Ga0207690_11774296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300026088\|Ga0207641_12204650	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300026089\|Ga0207648_11318616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300026095\|Ga0207676_12622173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300026118\|Ga0207675_102470852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300026142\|Ga0207698_11107618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300026142\|Ga0207698_12464877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300026320\|Ga0209131_1174444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300026551\|Ga0209648_10582839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300026551\|Ga0209648_10836460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300026552\|Ga0209577_10644191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300026552\|Ga0209577_10713045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300027164\|Ga0208994_1061668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300027326\|Ga0209731_1024038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300027548\|Ga0209523_1130663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300027565\|Ga0209219_1161917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300027875\|Ga0209283_10308994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300027886\|Ga0209486_11102579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300028047\|Ga0209526_10123255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1821	Open in IMG/M
3300031720\|Ga0307469_12357385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300031824\|Ga0307413_12204619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300032205\|Ga0307472_102683320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300033814\|Ga0364930_0333962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.92%
Host-Associated	Host-Associated	23.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.50%
Plants	Host-Associated → Plants	23.08%
Aquatic	Environmental → Aquatic	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.26%
Sediment	Environmental → Aquatic → Sediment	2.56%
Marine	Environmental → Aquatic → Marine	0.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.56%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300023021	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-Q76	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0665.00007060	2162886013	Switchgrass Rhizosphere	KNATEEQSLAGKGITLALEKIADDARAMRDLLERQLQETDRIADASRVMLDIAQKNDAIAREFNATVQNIVRSGQEFESEVTRFRFKGADA
JGI24743J22301_100462322	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	EIAAQVRNATDEQSLAGRGITAALEKIAEDARAMRDSLDRQLQETDRIADASRTMLDIAQANDAIAREFNTTVQSLVTSGKDFESEVAKFRFTE*
Ga0055486_100548712	3300004071	Natural And Restored Wetlands	AGKGITTGLEKIAEDAHAMRDLLERQLQETDRIADAVRVMLDIATKNDAMAREFNSTLTNLVHSGQEFEAEVARFRYSGTDA*
Ga0063454_1000056926	3300004081	Soil	AQVKSATDEQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVSRFRV*
Ga0062589_1026368521	3300004156	Soil	HLHEVTSRMSDHIAEINRATREQASGTRLLAQEAERVREIAGQVKVATDEQSQAGRGITVALERIADDARAMRDSLDRQLRETDRIADASRTMLDIAQKNDAIAREFNATVQNLVRSGQEFESEVTRFRFKGADA*
Ga0062594_1008220862	3300005093	Soil	HIAEINRATREQARGTQMLAQESERVREIAAMVRTATDEQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVSRFRVG
Ga0062594_1032181812	3300005093	Soil	ARGTQLLAMEAERVREIAAQVRNATDEQSLAGGGITSALEKIAEDARAMRDSLDRQLQETDRIADASRTMLDIAQENEAVAREFNATMQNLVRSGQDFESEVKRFRFTAG*
Ga0066690_100101601	3300005177	Soil	MSDHIAEINRASREQARGTQLLAQEAERVREIAAQVRNATDEQSLAGRGITAALEKIAEDARAMRDSLDRQLRETDRIADASKTMLDIAQANDAIAREFNTTVQSLVTSGKDFESEVAKFRFEK*
Ga0065705_103969391	3300005294	Switchgrass Rhizosphere	DIAAQVKNATEEQSLAGKGITLALEKIADDARAMRDLLERQLQETDRIADASRVMLDIAQKNDAIAREFNATVQNIVRSGQEFESEVTRFRFKGADA*
Ga0070676_113440942	3300005328	Miscanthus Rhizosphere	TAALEKIADDARAMRDSLDRQLRETDRIADASKTMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVARFRVG*
Ga0070683_1005533192	3300005329	Corn Rhizosphere	TDEQSQAGRGISTALERIAEDARAMRDLLERQLHETDRIADASRTMLDIAQANDAVAREFDSTVQNLVTSGRNFENEVGRFRFSA*
Ga0070670_1002657381	3300005331	Switchgrass Rhizosphere	QVKNATEEQSSAGKGITSALEKIADDARAMRDSLDRQLRETDRIADASKTMLDIAQENDAIAREFDATVQSLVASGQEFESEVARFRLTVK*
Ga0070677_100174075	3300005333	Miscanthus Rhizosphere	HEVTSRMSDHISEINRATREQARGTQMLAQESERVREIAAMVRTATDEQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVSRFRVG*
Ga0068868_1021947072	3300005338	Miscanthus Rhizosphere	INRATREQARGTQLLAEESDRVREIAGQVKNATDEQSTAGRGITVALEKISEDARAMRDLLDRQLQETDSIADASRMMLDIAQSNDAIAREFNATVQNLVTSGRDFETEVARFRFTG*
Ga0070711_1019819211	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SRGTEMLAQEAERVRDIAAQVKKATDEQSQAGRGITAALENIAFDARAMRDLLERQLNETDRIAAASKTMLDIAQQNDSIAREFNATVQNLVQSGQDFEAEVKRFRIKV*
Ga0066686_101657701	3300005446	Soil	AQVKTATDEQSQAGRGITSAMEKIADDQRAMRDHLQRQMQETERIAQAARTMLDIAQENDAIAREFNATVQNLVLSGRDFETEVARFRYGGGEA*
Ga0068867_1020309211	3300005459	Miscanthus Rhizosphere	HLHEVTSRMSDHISEINRATREQARGTEMLAQESERVREIAAMVKTATDEQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVARFKVG*
Ga0070707_1008361092	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AERVREIAAQVKSATNEQSQAGHGITIALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAVAREFNATVQNLVLSGRDFESEVARFRYRGGEA*
Ga0070698_1022008581	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DEQSLAGRGITAALEKIAEDARAMRDSLDRQLRETDRIADASRTMLDIAQANDAIAREFNTTVQSLVTSGKDFESEVAKFRFQE*
Ga0070697_1003407171	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TQRLAEEAERVREIAEQVKNAADEQSQAGRGITAALEKIADDAKAMRDSLDRQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES*
Ga0070697_1005976851	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LAEEAERVREIAEQVKNAADEQSQAGLGITAALEKIADDAKAMRDSLERQMRESDRIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES*
Ga0070697_1016973241	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ERVREIAAQVKGATDEQSQAGRGITAALEKIADDARAMRDHLQRQMEETERIAEAARTMLDIAQANDAIAREFNATVQNLVISGRNFETEVARFRYSGGDA*
Ga0066697_102068002	3300005540	Soil	QARGTELLAQEAERVREIAAQVKSATNEQSQAGHGITVALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAVAREFNATVQNLVLSGRDFESEVARFRYRGGEA*
Ga0070695_1007369691	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	REIAAQVKVATDEQSQAGRGITAALEKIADDARAMRDSLERQLRETDRIADASRTMLDIAQENDAIAREFNATVQNLVASGKEFESEVARFRLSVVK*
Ga0070704_1006729461	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AAQVKNATEEQSLAGKGITLALEKIADDARAMRDLLERQLQETDRIADASRVMLDIAQKNDAIAREFNATVQNLVRSGHEFESEVTRFRFKGADA*
Ga0066704_101456851	3300005557	Soil	AQEADRVREIAAQVKKATEEQSQAGRGITVAAEKIAEDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAIAREFNATVQNLVLSGRDFESEVARFRYRGGEA*
Ga0066700_104260952	3300005559	Soil	RVREIAGQVKNAADEQSQAGRGITAALSKIADDARAMRDQLERQMRESERIAEASRTMLEIAQANDAIAREFDATVQSLVSSGRDFEAEVRRFRYSAGD*
Ga0068854_1006597691	3300005578	Corn Rhizosphere	LAQEAERVREIAAQVRNATDEQSLAGRGITAALEKIAEDARAMRDSLDRQLQETDRIADASRTMLDIAQANDAIAREFNTTVQSLVTSGKDFESEVAKFRFTE*
Ga0068858_10000212521	3300005842	Switchgrass Rhizosphere	ATDEQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVARFRVG*
Ga0075281_10028081	3300005897	Rice Paddy Soil	VKGAAGEQSQAGRGITAALEKIAEDARAMRDRLEAQMRETERIADAARGMLEIAQQNDAVAREFNTTVQNLVLSGRDFESEVARFRFSRAEDAGQKADG*
Ga0070717_117644482	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QEAERVREIAAQVRNATDEQSSAGRGITAALEKIADDARAMRDSLERQLRETDRIADASRTMLEIAQANDGIAREFNTTVQSLVTSGRDFESEVARFRFTGES*
Ga0070717_118527191	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RGITVALERIAEDARNMRDLLDRQLSETDRIADASRTMLDIAQQNDAVAREFNATVQNLVRSGQEFESEVSRFRG*
Ga0066656_107535391	3300006034	Soil	EIAAQVKKATEEQSQAGRGITVAAEKIAEDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAIAREFNATVQNLVLSGRDFESEVARFRYRGGEA*
Ga0070716_1014606912	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AERVREIAGQVKTATDEQSTAGRGITVALERIAEDARNMRDLLDRQLSETDRIADASRTMLDIAQQNDAVAREFNATVQNLVSSGQEFESEVSRFRG*
Ga0075521_104941111	3300006642	Arctic Peat Soil	EQARGTQLLAQEAERVREIAAQVKTATDEQSQAGRGISSALEKIAEDARAMRDSLDRQLKETDRIADASKTMLDIAQANDAIAREFNATVQSLVTSGRDFESEVSRFRYSD*
Ga0066658_104827882	3300006794	Soil	LHEVTSRMSDHIAEINRATREQARGTQLLAQEADKVREIAAQVKKATDEQSQAGAGITAALENIAFDSRAMRDQLQRQLNETDRIADASKTMLDIAQQNDSIAREFNATVQNLVRSGQDFETEVKRFRAK*
Ga0066659_110680722	3300006797	Soil	SDHIAEINRASREQARGTQLLAQEAERVREIAAQVRNATDEQSLAGRGITAALEKIAEDARAMRDSLDRQLRETDRIADASKTMLDIAQANDAIAREFNTTVQSLVTSGKDFESEVSKFRFEK*
Ga0079221_106847131	3300006804	Agricultural Soil	KTGRGITEALEKIANDARTMRDSLERQLRETDRIAEAARNMLDIAQENDALARQFNTTLQNIVVSGREFETEVARFRIGGDEN*
Ga0075434_1012118501	3300006871	Populus Rhizosphere	TREQASGTQMLAQEAERVREIAAQVKVATDEQSQAGRGITAALEKIADDARAMRDSLDRQLRETDRIADASRTMLDIAQENDAIAREFNATVQNLVASGKEFESEVARFRLTVK*
Ga0079217_104495531	3300006876	Agricultural Soil	STAGRGITTALERMASDSRAMRDLLERQLQETDRIADASRTMLSIAQQNDQIARDFSETVQNLVRSGQGFEAEVARFRIAKQ*
Ga0068865_1013450052	3300006881	Miscanthus Rhizosphere	TQLLAQEAEKVREIAGQVKKATDEQSQAGRGITAALEKIADDARAMRDSLDRQLRETDRIADASRTMLDIAQANDAIAREFNTTVQSLVASGQEFESEVARFRLVQT*
Ga0079215_115678041	3300006894	Agricultural Soil	IAAQVKNATEEQSLAGKGITLALEKIADDARAMRDLLERQLQETDRIADASRVMLDIAQKNDAIAREFNATVQNLVRSGNEFESEVTRFRFKGAE*
Ga0075424_1027036762	3300006904	Populus Rhizosphere	AGRGITSAVENIAFDTRAMRDLLERQLNETDRIAEASKTMLDIAQQNDSIAREFNATVQELVRSGQEFETEVKRFRIRTT*
Ga0079216_113966642	3300006918	Agricultural Soil	EQSTAGRGITSALEKIAEDARAMRDLLERQLEETDRIADASRVMLEIAQKNDAMAREFNATVQNLVRSGQEFESEVTRFRFRGADA*
Ga0079218_120087491	3300007004	Agricultural Soil	LMAQESERVRDIAAQVKNATQEQSTAGRGITSALEKIAEDARAMRDLLERQLEETNRIADASRTMLDIAQKNDAMAHEFNSTLQGLVRSGQDFENEVTRFRFSGSDQ*
Ga0079218_128908401	3300007004	Agricultural Soil	ARGTQLMAQESERVRDIAAQVKNATEEQSLAGKGITVALEKIADDARAMRDLLERQLQETDRIADASRVMLDIAQKNDAIAREFNATVQNLVRSGNEFESEVTRFRFKGADA*
Ga0099791_106165541	3300007255	Vadose Zone Soil	VKNAADEQSQAGRGITIALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAVAREFNATVQNLVLSGRDFESEVARFRYRGGEA*
Ga0066710_1004138671	3300009012	Grasslands Soil	IAEINRGTREQARGTELLAQEADRVREIAAQVKKATEEQSQAGRGITVAAEKIAEDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAIAHEFNATVQNLVLSGRDFESEVARFRYRGGEA
Ga0066710_1032834131	3300009012	Grasslands Soil	KNAADEQSQAGRGITAALEKIADDAKAMRDSLDRQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES
Ga0066710_1048815422	3300009012	Grasslands Soil	EIAEQVKNAADEQSQAGRGITAALEKIADDAKAMRDSLERQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES
Ga0099829_102866024	3300009038	Vadose Zone Soil	GLGITAALEKIADDAKAMRDSLERQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES*
Ga0099830_111582182	3300009088	Vadose Zone Soil	ALEKIADDAKAMRDSLERQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES*
Ga0099828_103096742	3300009089	Vadose Zone Soil	AERVREIAAQVKTATEEQSKTGRGITAAMEKIAEDARAMRDSLERQLRETDRIAEASRTMLGIAQENDAIAREFNATVQNLVSSGQDFESEVSRFRVTG*
Ga0099827_115562491	3300009090	Vadose Zone Soil	AQIHKAMREQAEGTQRLAEEAERVREIAEQVKNAADEQSQAGRGITAALEKIADDAKAMRDSLERQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES*
Ga0099827_115923791	3300009090	Vadose Zone Soil	EINRATREQARGTELLAQEADRVREIAAQVKSATDEQSQAGRGITAALEKIADDARAMRDHLQRQMQETERIAQAARTMLDIAQENDAIAREFNATVQNLVLSGRDFETEVARFRYGGEEA*
Ga0075418_100981334	3300009100	Populus Rhizosphere	VRDIAAQVKNATEEQSQAGRGITVALEKIAEDARAMRDLLERQLQETDRIADASRTMLDIATKNDAMAHEFNTTLQNLVRSGQEFESEVSRFRYSASE*
Ga0066709_1028156831	3300009137	Grasslands Soil	AGRGITVAAEKIAEDARNMRDHLQRQMSETERIAQAARTMLDIAQANDAIAREFNATVQNLVLSGRDFESEVARFRYRGGEA*
Ga0114129_110229221	3300009147	Populus Rhizosphere	AQVKSATNEQSQAGHGITIALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAVAREFNATVQNLVLSGRDFESEVSRFRYRGGEA*
Ga0134122_129347572	3300010400	Terrestrial Soil	SRMSDHISEINRATREQARGTQMLAQESERVREIAAMVRTATDEQSQAGRGITAALEKIADDARAMRDSLDRQLRETDRIADASKTMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVARFRLTVV*
Ga0134121_129039251	3300010401	Terrestrial Soil	HLHEVTSRMSDHISEINRATREQAAGTQLLAQEAERVREIAAQVRGATDEQSQAGRGITAGLEKIADDARAMRDSLDRQLRETDRIADASRTMLDIAQENDAIAREFNATVQNLVASGKEFESEVARFRLSVQ*
Ga0137392_102501183	3300011269	Vadose Zone Soil	ASREQARGTQLLAVEAERVREIAAQVRNATDEQSLAGRGITAALEKIAEDARAMRDSLDRQLRETDRIADASKTMLDIAQANDAIAREFNATVQSLVTSGKDFESEVARFRFTGES*
Ga0137391_115482931	3300011270	Vadose Zone Soil	AAQVKSATDEQSQAGRGITMALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAVAREFNATVQNLVLSGRDFESEVARFRYRGGEA*
Ga0137448_10002256	3300011427	Soil	VREIAAQVKVATDEQSKAGRGITAALEKMADDARAMRDSVDQQLRETDRIADASSTMLDIAQKNDAIARQFDATVQNLVASGKELESEVARFRLTVT*
Ga0137437_12735991	3300011442	Soil	AGRGITAALEKIADDARAMRDSLDRQLRETDRIADASRTMLDIAQKNDAIARQFDATVQNLVTSGKEFESEVARFRLTVT*
Ga0137389_104017591	3300012096	Vadose Zone Soil	RAMREQAEGTQRLAEEAERVREIAEQVKNAADEQSQAGLGITVALEKIADDAKAMRDSLERQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES*
Ga0137389_109333742	3300012096	Vadose Zone Soil	SDHIAEINRGSREQARGTQLLAQEAEKVREIAGQVKKATDEQSQAGRGITAALENIAFDARAMRDLLERQLNETDRIAAASKTMLDIAQQNDSIAREFNATVQNLVQSGQDFEAEVKRFRIRT*
Ga0137389_112247302	3300012096	Vadose Zone Soil	LAQEAERVREIAAQVKGATDEQSQAGRGITAALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQANDAIAREFNATVQDLVLSGRNFESEVARFRYSGDA*
Ga0137389_116506121	3300012096	Vadose Zone Soil	RGISSALEKIAEDARAMRDSLDRQLKETDRIADASRTMLDIAQANDAIAREFNATVQSLVTSGRDFESEVARFRYSD*
Ga0137382_113565271	3300012200	Vadose Zone Soil	DDQAKASRHLHEVTSRMSDHIVEINRATREQASGTQMLATEAERVREIAAQVKTATDEQSLAGRGISAALEKMAEDARAMRDLLDLQLSETDRIADASRTMLDIAQQNDAIAREFNSTVQNLVRSGQEFESEVARFRS*
Ga0137381_109403031	3300012207	Vadose Zone Soil	LAQEAERVREIAAQVKVATDEQSQAGRGITAAMEKIADDARAMRDSLERQLRETDRIADASRTMLDIAQENDAIAREFNATVQNLVASGKEFESEVARFRLSVK*
Ga0150985_1048973632	3300012212	Avena Fatua Rhizosphere	EMLAQEAELVRDIAAQVKKATDEQSQAGRGITTALEKIADDAKTMRDLLEGQLRETDRIADASRLMLDIAQENDSIAREFNSTVQNLARSGQEFDAEVAKFKVVEG*
Ga0137370_110397191	3300012285	Vadose Zone Soil	GITAALSKIADDARAMRDQLERQMRESERIAEASKTMLEIAQANDAIAREFDATVQSLVSSGRDFEAEVRRFRV*
Ga0137372_110047411	3300012350	Vadose Zone Soil	KSATNEQSQAGHGITIALEKIAEDARKMRDHLQRQMSETERIAQAARTMLDIAQQNDAVAREFNATVQNLVLSGRDFESEVARFRYRGGEA*
Ga0137386_112128242	3300012351	Vadose Zone Soil	IAAQVKVATDEQSQAGRGITAALEKIADDARAMRDSLERQLRETDRIADASRMMLDIAQENDAIAREFNATVQNLVASGKEFESEVARFRLSVK*
Ga0137419_101381271	3300012925	Vadose Zone Soil	ERVREIAAQVRNATDEQSSAGRGITSALEKISEDALAMRDSLDRQLRETDRIADASKTMLDIAQANDAIAREFNATVQSMVTSGREFESEVSKFKFTE*
Ga0157378_104850553	3300013297	Miscanthus Rhizosphere	EQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVARFRVG*
Ga0157372_132628761	3300013307	Corn Rhizosphere	VRESAGQVKTATDEQSTAGRGITVALERIAEDARNMRDLLDRQLSETDRIADASRTMLDIAQQNDAVAREFNATAQNLVRSGQEFESEVSRFRG*
Ga0120111_11614761	3300013764	Permafrost	VTSRMSDHIAEINRATTEQATGTELLAGESERVREIALQVRNATDEQSTAGRGITAALERISDDARGIRDLLQRQLDETDAIASASKMMLGIAQENDAIAREFNTAVQRLVTSGQQFEVEVGRFRLGEN*
Ga0182000_105644972	3300014487	Soil	ITSALEKIAEDARAMRDLLERQIEETDRIADASRVMLEIAQKNDAMAREFNATVQNLVRSGQEFESEVTRFRFRGADA*
Ga0182019_112515381	3300014498	Fen	REQARGTQLMAQESERVREIAAQVKGATDEQSQAGRGISTALERIAEDARAMRDLLERQLHETDRIADASRTMLDIALANDAVAREFDTTVQSLVTSGSNFEAEVARFRFRGGT*
Ga0180075_10257161	3300015252	Soil	AQESERVRDIAAQVKNATEEQSQAGRGITAALERMAEDARAMRDLLERQLQETDRIADASRVMLDIAQKNDDVAREFNTTMQRLVHSGQEFETEVTRFRFTGSES*
Ga0132255_1053786011	3300015374	Arabidopsis Rhizosphere	VREIAAQVKSATNEQSQAGHGITIALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAVAREFNATVQNLVMSGRDFESEVARFRYRGGEA*
Ga0066667_105339303	3300018433	Grasslands Soil	AEEAERVREIAEQVKNAADEQSQAGRGITAALEKIADDAKAMRDSLERQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES
Ga0190268_118540712	3300018466	Soil	AQVKSATEEQSLAGRGITTALERMSDDARAMRDLLERQMEETDRIADAALVMLSIAQQNDQIAREFSDTVANLVQSGQSFESEVARFRIRR
Ga0190268_123250741	3300018466	Soil	TEEQSLAGKGITLALEKIADDARAMRDLLERQLQETDRIADASRVMLEIAQKNDAMAREFNATVQNLVRSGQEFESEVTRFRFKGADA
Ga0066662_103714662	3300018468	Grasslands Soil	AAQVRNATDEQSLAGRGITAALEKIAEDARAMRDSLDRQLRETDRIADASKTMLDIAQANDAIAREFNTTVQSLVTSGSDFESEVSKFRFSE
Ga0210404_108269161	3300021088	Soil	INRGSREQARGTQLLAQEAERVREIAGQVKDATDEQSMAGRGISAAMEKIAEDAIAMRDSLDRQLKETDRIADASRTMLDIAKANDAIAREFNATVQSLVTSGSEFESEVARFRFTGEG
Ga0213876_101113261	3300021384	Plant Roots	QVKNATAEQSTAGRGITSALEKIAEDARAMRNLLEHQLQETDRIADASREMLDIAQKNDAVAREFTTTVQNLVRSGREFESEVTRFKFSADA
Ga0233354_1123382	3300023021	Soil	TDEQSLAGRGITSALEKIAEDARAMRDSLDRQLQETDRIADASKAMLEIAQVNDGIAREFNTTVQSLVTSGRDFESEVSKFRFTRDS
Ga0247665_10541011	3300024219	Soil	SALEKIAEDARAMRDSLDRQLQETDRIAEASKTMLEIAQVNDGIAREFNNTVQSLVTSGRDFETEVAKFRFTGES
Ga0247674_10239781	3300024275	Soil	LHEVASRMSDHIAEINRASREQASGTQLLAMEAERVREIAAQVRNATDEQSLAGRGITSALEKIAEDARAMRDSLDRQLQETDRIAEASKTMLEIAQVNDGIAREFNNTVQSLVTSGRDFETEVAKFRFTGES
Ga0137417_12129453	3300024330	Vadose Zone Soil	AEGTQRLAEEAERVREIAEQVKNAADEQSQAGLGITAALEKIADDAKAMRDSLERQMRESERIAEASRTMLEIAQANDAIAREFNTTVQNLVTSGRDFEAEVRRFRYSAES
Ga0207930_11324512	3300025604	Arctic Peat Soil	QAGRGISSALERIADDARAMRDLLERQLHETDRIADASRTMLDIALANDAVAREFNSTVQSLVSSGSNFEAEVAKFRFRGGSN
Ga0207650_100756811	3300025925	Switchgrass Rhizosphere	LLAQEAERVREIAAQVRNATDEQSLAGRGITSALEKIAEDARAMRDSLDRQLRETDRIADASKTMLDIAQANDAIAREFNTTVQSLVTSGKDFESEVAKFKFTE
Ga0207690_117742961	3300025932	Corn Rhizosphere	LATDEQSQAGRGITSALEKIADDARAMRDLLERQQHETDRIAEASKTMLDIAQQNDSIAREFNATVQNLVQSGQDFESEVKRFRIRS
Ga0207641_122046502	3300026088	Switchgrass Rhizosphere	VTSRMSDHISEINRATREQARGTQMLAQESDRVREIAAMVRTATDEQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVSRFRVG
Ga0207648_113186162	3300026089	Miscanthus Rhizosphere	AAQVKNATQEQSTAGRGITSALEKIAGDARAMRDLLERQLEETDRIADASRTMLDIAQKNDAMARDFNDTLQDLVRSGRDFESEVSRFRYSGSDA
Ga0207676_126221732	3300026095	Switchgrass Rhizosphere	AAQVKSATDEQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQENDAIAREFNRTVQNLVQSGKDFESEVARFRVG
Ga0207675_1024708521	3300026118	Switchgrass Rhizosphere	REQARGTQMMAQESERVRDIAAQVKNATQEQSTAGRGITTALEKIAEDARAMRDLLERQLQETDRIAEASRVMLDIAQKNDAMARDFNSTLQNLVRSGHEFESEVTRFRYSAKEQ
Ga0207698_111076182	3300026142	Corn Rhizosphere	AQVKGATDEQSQAGRGITSALEKIADDARAMRDLLERQQHETDRIAEASKTMLDIAQQNDSIAREFNATVQNLVQSGQDFESEVKRFRIRS
Ga0207698_124648771	3300026142	Corn Rhizosphere	QARGTQMLAQESERVREIAAQVKGATDEQSQAGRGITTALEKIAEDARAMRDLLERQLHETDRIADASRMMLDIAQANDAIAREFNRTVQNLVQSGKDFESEVSRFRVG
Ga0209131_11744442	3300026320	Grasslands Soil	IAEINRASREQARGTQLLAMEAERVREIAAQVRNATDEQSLAGRGITSALEKIAEDARAMRDSLDRQLQETDRIAEASKTMLEIAQVNDGIAREFNATVQSLVTSGRDFEAEVSKFRFTGES
Ga0209648_105828391	3300026551	Grasslands Soil	REIAAQVKSATDEQSQAGHGITMALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQENDAVAREFNATVQNLVLSGRDFESEVARFRYRGGEA
Ga0209648_108364602	3300026551	Grasslands Soil	KASRHLHEVTSRMSDHIAEINRGTREQARGTQLLAQESERVREIAAQVKNATDEQSVAGRGISAALEKIAEDARAMRDLLERQLRETDRIADASRMMLDIAQENDAIAREFSSTVQNLVQSGREFESEVGRFRFTGT
Ga0209577_106441911	3300026552	Soil	TQLLAQEAERVREIAAQVRNATDEQSLAGRGITAALEKIADDARAMRDSLDRQLRETDRIADASKTMLDIAQANDAIAREFNTTVQSLVTSGKDFEAEVAKFRFEK
Ga0209577_107130451	3300026552	Soil	QVKVATDEQSQAGRGITAALEKIADDARAMRDSLDRQLRETDRIADASKTMLDIAQENDAIAREFNATVQNLVASGKEFESEVARFRLTVK
Ga0208994_10616682	3300027164	Forest Soil	EIAAQVKNSTDEQSLAGRGIGTAMEKIAEDARAMRDSLDRQLRETDRIADASKTMLDIAQANDAIAREFNATVQSLVTSGRDFETEVARFRFQGE
Ga0209731_10240382	3300027326	Forest Soil	MHYAALAGKGITLALEKIADDARAMRDLLERQLQETDRIADASRVMLDIAQKNDAIAREFNATVQNLVRSGQDFESEVTRFRFKGADA
Ga0209523_11306632	3300027548	Forest Soil	IAEINRASREQARGTQLLAMEAERVREIAAQVRNATDEQSLAGRGITSALEKIAEDARAMRDSLDRQLRETDRIADASRTMLDIAQANDAIAREFNATVQNLVTSGREFEAEVSRFRFNE
Ga0209219_11619171	3300027565	Forest Soil	SRHLHEVTSKMSDHIAEIHRAMQEQANGTQLLAREAERVREIAGQVKNAADEQSQAGRGITAALEKIADDARAMRDQLERQMRESERIAEASRTMLEIAQANDAIAREFDATVQSLVSSGRDFEAEVRRFRYSADS
Ga0209283_103089941	3300027875	Vadose Zone Soil	DAIAEINRGTREQARGTELLAQEAERVREIAAQVKSATDEQSQAGRGITAALEKIADDARNMRDHLQRQMSETERIAQAARTMLDIAQANDAIAREFNATVQNLVLSGRNFESEVARFRYSGES
Ga0209486_111025791	3300027886	Agricultural Soil	TEEQSLAGKGITVALEKIADDARAMRDLLERQLQETDRIADASRVMLDIAQKNDAIAREFNATVQNLVRSGNEFESEVTRFRFKGADA
Ga0209526_101232552	3300028047	Forest Soil	VREIAGQVKNAADEQSQAGRGITAALEKIADDARAMRDQLERQMRESERIAEASRTMLEIAQANDAIAREFDATVQSLVSSGRDFEVQRLAPRRCEV
Ga0307469_123573851	3300031720	Hardwood Forest Soil	EIAGQVKTATDEQSMAGRGITAALEKIAEDARAMRDLLDRQLSETDRIADASRTMLDIAQQNDAIAREFNATVQNLVRSGQEFESEVGRFRG
Ga0307413_122046192	3300031824	Rhizosphere	NATEEQSLAGRGITAALERISEDARAMRDLLERQLEETERIADATRVMLDIAQKNDDVAREFNTTMQRLVSSNQEFESEVSRFRFRAGET
Ga0307472_1026833202	3300032205	Hardwood Forest Soil	SMREQANGTQLLAQEAERVREIAGQVKNAADEQSQAGRGITAALSKIADDARAMRDQLERQMRESERIAEASRTMLEIAQANDAIAREFDATVQSLVSSGRDFEAEVRRFRYSAGD
Ga0364930_0333962_227_508	3300033814	Sediment	DIAAQVKTATDEQSQAGRGITTALEKIADDARSMRDLLERQLRETDRIADASRLMLDIAQENDAIAREFNSTVQNLARSGQEFDDEVARFRTN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077644

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences