Metagenome / Metatranscriptome Family F077635

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077635
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	53 residues
Representative Sequence	LTGADVRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPRERRGSR
Number of Associated Samples	94
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.62 %
% of genes near scaffold ends (potentially truncated)	81.20 %
% of genes from short scaffolds (< 2000 bps)	89.74 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.991 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (17.949 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.573 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.64% β-sheet: 25.30% Coil/Unstructured: 65.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01243	Putative_PNPOx	2.59
PF00501	AMP-binding	1.72
PF00196	GerE	1.72
PF13532	2OG-FeII_Oxy_2	1.72
PF00872	Transposase_mut	1.72
PF01471	PG_binding_1	1.72
PF00248	Aldo_ket_red	1.72
PF00132	Hexapep	1.72
PF12681	Glyoxalase_2	0.86
PF03466	LysR_substrate	0.86
PF00753	Lactamase_B	0.86
PF07883	Cupin_2	0.86
PF00931	NB-ARC	0.86
PF08386	Abhydrolase_4	0.86
PF07690	MFS_1	0.86
PF00441	Acyl-CoA_dh_1	0.86
PF01266	DAO	0.86
PF10009	DUF2252	0.86
PF04014	MazE_antitoxin	0.86
PF02899	Phage_int_SAM_1	0.86
PF04760	IF2_N	0.86
PF04672	Methyltransf_19	0.86
PF00296	Bac_luciferase	0.86
PF13546	DDE_5	0.86
PF13613	HTH_Tnp_4	0.86
PF03861	ANTAR	0.86
PF13830	DUF4192	0.86
PF00005	ABC_tran	0.86
PF02481	DNA_processg_A	0.86
PF13646	HEAT_2	0.86
PF00571	CBS	0.86
PF12680	SnoaL_2	0.86
PF01037	AsnC_trans_reg	0.86
PF00294	PfkB	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.72
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.72
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.86
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.86
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.86
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.86
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.59 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.62 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.42 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.56 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.71 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.71 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.85 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.42 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.71 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.71 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.85 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Embleya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya	3.42 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.71 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.85 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.85 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.85 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.85 %
unclassified Pseudonocardiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae	0.85 %
Intrasporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Embleya hyalina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya hyalina	3.42 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	1.71 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Pseudonocardiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	0.85 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	0.85 %
Nonomuraea turkmeniaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea turkmeniaca	0.85 %
Nocardia vinacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia vinacea	0.85 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.85 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Embleya hyalina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya hyalina	3.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Frankia sp. CiP3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CiP3	0.85 %
Frankia sp. BMG5.36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. BMG5.36	0.85 %
Pseudonocardiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	0.85 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	0.85 %
Nonomuraea turkmeniaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea turkmeniaca	0.85 %
Nocardia vinacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia vinacea	0.85 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.85 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100414831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300002568\|C688J35102_120949690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2866	Open in IMG/M
3300004092\|Ga0062389_100928232	Not Available	1054	Open in IMG/M
3300004152\|Ga0062386_100192399	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300004152\|Ga0062386_100999362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300005338\|Ga0068868_100055420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3127	Open in IMG/M
3300005436\|Ga0070713_100063023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3106	Open in IMG/M
3300005445\|Ga0070708_102205952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	509	Open in IMG/M
3300005610\|Ga0070763_10427247	Not Available	749	Open in IMG/M
3300005900\|Ga0075272_1010638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CiP3	1765	Open in IMG/M
3300006028\|Ga0070717_11983786	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006028\|Ga0070717_12129208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya hyalina	504	Open in IMG/M
3300006174\|Ga0075014_100153649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300006175\|Ga0070712_101332556	Not Available	626	Open in IMG/M
3300006176\|Ga0070765_100329293	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300006572\|Ga0074051_11534728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300006804\|Ga0079221_10275192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300006904\|Ga0075424_100470232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia vinacea	1342	Open in IMG/M
3300009038\|Ga0099829_10999263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300009137\|Ga0066709_101748742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300009148\|Ga0105243_10533959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1118	Open in IMG/M
3300009520\|Ga0116214_1163242	Not Available	832	Open in IMG/M
3300009524\|Ga0116225_1467417	Not Available	560	Open in IMG/M
3300009698\|Ga0116216_10927596	Not Available	521	Open in IMG/M
3300009700\|Ga0116217_10290457	Not Available	1053	Open in IMG/M
3300009700\|Ga0116217_10745473	Not Available	604	Open in IMG/M
3300009700\|Ga0116217_10851038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	560	Open in IMG/M
3300009824\|Ga0116219_10086503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	1833	Open in IMG/M
3300009839\|Ga0116223_10237093	Not Available	1104	Open in IMG/M
3300010343\|Ga0074044_10240338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1197	Open in IMG/M
3300010361\|Ga0126378_10883731	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1001	Open in IMG/M
3300010366\|Ga0126379_11973272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	686	Open in IMG/M
3300010371\|Ga0134125_12225561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya hyalina	596	Open in IMG/M
3300010373\|Ga0134128_11371659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	779	Open in IMG/M
3300010373\|Ga0134128_12412028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300010376\|Ga0126381_101797705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	885	Open in IMG/M
3300010376\|Ga0126381_102277506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300010379\|Ga0136449_100289600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2998	Open in IMG/M
3300010379\|Ga0136449_100542891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2002	Open in IMG/M
3300010379\|Ga0136449_101043460	Not Available	1309	Open in IMG/M
3300010379\|Ga0136449_101712400	Not Available	947	Open in IMG/M
3300010379\|Ga0136449_102141353	Not Available	819	Open in IMG/M
3300010379\|Ga0136449_103089399	Not Available	647	Open in IMG/M
3300010379\|Ga0136449_103840169	Not Available	564	Open in IMG/M
3300010379\|Ga0136449_104193195	Not Available	535	Open in IMG/M
3300010398\|Ga0126383_12532121	Not Available	597	Open in IMG/M
3300010880\|Ga0126350_10709640	Not Available	558	Open in IMG/M
3300012210\|Ga0137378_11282180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300012211\|Ga0137377_10591749	Not Available	1046	Open in IMG/M
3300012211\|Ga0137377_11331816	Not Available	648	Open in IMG/M
3300012359\|Ga0137385_11123913	Not Available	646	Open in IMG/M
3300012494\|Ga0157341_1024681	Not Available	615	Open in IMG/M
3300013296\|Ga0157374_12094339	Not Available	592	Open in IMG/M
3300013296\|Ga0157374_12094339	Not Available	592	Open in IMG/M
3300014969\|Ga0157376_11779139	Not Available	652	Open in IMG/M
3300017821\|Ga0187812_1258976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300017926\|Ga0187807_1041759	Not Available	1420	Open in IMG/M
3300017928\|Ga0187806_1243848	Not Available	620	Open in IMG/M
3300017928\|Ga0187806_1331600	Not Available	542	Open in IMG/M
3300017932\|Ga0187814_10204063	Not Available	743	Open in IMG/M
3300017933\|Ga0187801_10068614	Not Available	1309	Open in IMG/M
3300017937\|Ga0187809_10173664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea turkmeniaca	754	Open in IMG/M
3300017943\|Ga0187819_10259238	Not Available	1016	Open in IMG/M
3300017955\|Ga0187817_10256528	Not Available	1114	Open in IMG/M
3300018007\|Ga0187805_10259435	Not Available	797	Open in IMG/M
3300018043\|Ga0187887_10371966	Not Available	843	Open in IMG/M
3300018058\|Ga0187766_10626644	Not Available	736	Open in IMG/M
3300018086\|Ga0187769_10137025	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300018086\|Ga0187769_10312806	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300020581\|Ga0210399_10251543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1473	Open in IMG/M
3300020582\|Ga0210395_10982564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300020583\|Ga0210401_11367645	Not Available	566	Open in IMG/M
3300021403\|Ga0210397_10327234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1131	Open in IMG/M
3300021406\|Ga0210386_10120148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2172	Open in IMG/M
3300021407\|Ga0210383_10586814	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300021432\|Ga0210384_11736768	Not Available	529	Open in IMG/M
3300021474\|Ga0210390_10560528	Not Available	960	Open in IMG/M
3300021474\|Ga0210390_11379487	Not Available	562	Open in IMG/M
3300021479\|Ga0210410_11158815	Not Available	664	Open in IMG/M
3300025906\|Ga0207699_11200768	Not Available	562	Open in IMG/M
3300025939\|Ga0207665_10004216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. BMG5.36	9571	Open in IMG/M
3300025945\|Ga0207679_12002102	Not Available	527	Open in IMG/M
3300026294\|Ga0209839_10011286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3726	Open in IMG/M
3300026547\|Ga0209156_10342528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300027497\|Ga0208199_1016420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1678	Open in IMG/M
3300027696\|Ga0208696_1011203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3643	Open in IMG/M
3300027812\|Ga0209656_10202073	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300028906\|Ga0308309_10070896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2597	Open in IMG/M
3300031561\|Ga0318528_10181441	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300031681\|Ga0318572_10136243	Not Available	1412	Open in IMG/M
3300031747\|Ga0318502_10752815	Not Available	590	Open in IMG/M
3300031747\|Ga0318502_10917678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300031753\|Ga0307477_10549197	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031765\|Ga0318554_10705007	Not Available	566	Open in IMG/M
3300031770\|Ga0318521_10018325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3213	Open in IMG/M
3300031770\|Ga0318521_10204242	Not Available	1142	Open in IMG/M
3300031779\|Ga0318566_10085929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1533	Open in IMG/M
3300031798\|Ga0318523_10493488	Not Available	606	Open in IMG/M
3300031805\|Ga0318497_10698040	Not Available	569	Open in IMG/M
3300031831\|Ga0318564_10044366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1926	Open in IMG/M
3300031880\|Ga0318544_10198187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300031880\|Ga0318544_10288634	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031896\|Ga0318551_10435229	Not Available	748	Open in IMG/M
3300031910\|Ga0306923_10850222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300031959\|Ga0318530_10059634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300032055\|Ga0318575_10265644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300032261\|Ga0306920_103222695	Not Available	610	Open in IMG/M
3300032770\|Ga0335085_12112874	Not Available	568	Open in IMG/M
3300032782\|Ga0335082_10684554	Not Available	887	Open in IMG/M
3300032782\|Ga0335082_11476818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya hyalina	551	Open in IMG/M
3300032783\|Ga0335079_11474616	Not Available	673	Open in IMG/M
3300032805\|Ga0335078_11735781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya hyalina	683	Open in IMG/M
3300032805\|Ga0335078_12246837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300032892\|Ga0335081_12368871	Not Available	553	Open in IMG/M
3300033134\|Ga0335073_11391563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	686	Open in IMG/M
3300033158\|Ga0335077_12092777	Not Available	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.16%
Host-Associated	Host-Associated	6.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.63%
Aquatic	Environmental → Aquatic	14.53%
Plants	Host-Associated → Plants	6.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.63%
Freshwater	Environmental → Aquatic → Freshwater	13.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.71%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.22%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	15.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005900	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1004148312	3300002245	Forest Soil	WDIRGRWFGVVVAATPRLGELRRGETIPWRVIAAQIAPREGRDSG*
C688J35102_1209496904	3300002568	Soil	VIDVRIEGWDIRGRWFGVVVGATPWLGELRRGETIPWRVIAAQIAPHERRGSH*
Ga0062389_1009282324	3300004092	Bog Forest Soil	MKLTGLDVRIDGWEIRGRRFGVVVGATPRLGELRRGETIAWRVIAAQIAPGERRGSR*
Ga0062386_1001923992	3300004152	Bog Forest Soil	MNTGVDVRIDGWDMRGRWFGVVVGATARAGELRRGETIPWRAIAAQIAPREHSGLR*
Ga0062386_1009993621	3300004152	Bog Forest Soil	RAPPGDINSRWFGIVVGATPRLGELRRGETIPWRVIAAQIAPRERRGSR*
Ga0068868_1000554201	3300005338	Miscanthus Rhizosphere	RIDGWDIRGRWFGVVVGATPRTGELPRGQTIPWRVIAAQFAPRERRGSR*
Ga0070713_1000630231	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DGWDIRGRWFGVVVGAAPRLGELRRGETIPWRVIAAQIAPRERRGSP*
Ga0070708_1022059523	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTGVDVRVDGWDIHGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPREGCGSR*
Ga0070763_104272473	3300005610	Soil	IDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPGERRGSR*
Ga0075272_10106383	3300005900	Rice Paddy Soil	DVRIDGWDICGRWFGVVVGATPRTGELQRGETIPWRVIAAQIAPPERRSSR*
Ga0070717_119837861	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIASLIARRGRRGSR*
Ga0070717_121292081	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RGRWFGVVVGATPRLGELRRGETIPWRVIAAQLAPRGHRGSRSRDGT*
Ga0075014_1001536493	3300006174	Watersheds	GGDIRGRWFGGVAATPRLGELRRGETIPWCVIAAQIAPRERRGSR*
Ga0070712_1013325561	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQLAQRERRGSH*
Ga0070765_1003292931	3300006176	Soil	LCRDELTGADVRIDGWDIRGRWFGVVAGATPRTGELPRGQMIPWRVIAAHIAPREGRSSR
Ga0074051_115347282	3300006572	Soil	GWDIRGRWFGVVVGATPRIGELPRAETITWRVIATQIASHKRRDSR*
Ga0079221_102751923	3300006804	Agricultural Soil	VVGATPRLGELRRGETIPWRVIAAQIAPRGHRGSPSGDGTRP*
Ga0075424_1004702323	3300006904	Populus Rhizosphere	DIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQLAPRGHRGSRSRDGT*
Ga0099829_109992633	3300009038	Vadose Zone Soil	VRIDGWDIRGRWFGVVVGATPQLGELRRGETIPWRVIAAQIAPRERRGSR*
Ga0066709_1017487421	3300009137	Grasslands Soil	DGWDVRGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPPHRRGLR*
Ga0105243_105339591	3300009148	Miscanthus Rhizosphere	VRIDGWDIRGRWFGVVIAAVPRPGELPRGETIPWRVIAAHIAPRERRDSR*
Ga0116214_11632422	3300009520	Peatlands Soil	TGAEVRIGGWDIRGRWFGVVVGATPRLGKLRRGETIPWRVIAAQIAPCERRGSR*
Ga0116225_14674172	3300009524	Peatlands Soil	WDIRGRWFGVVVEATPRLGELRRSETIPWRVIAAQIAPPERRGLR*
Ga0116216_109275961	3300009698	Peatlands Soil	VVTEIGWDIRGRWFGVVVGATPRTGKLPRGETIPWRVIAAQIAPREGRGSR*
Ga0116217_102904572	3300009700	Peatlands Soil	MSSGVDVRIDGWDIRGRWFGVVVGATPRIGELRRGETIPWRVIAAQIAPRERRGPR*
Ga0116217_107454731	3300009700	Peatlands Soil	LDRRRPGGGVDIRTGGWDIRGRWFGVVVEATPRLGELRRGETISWRVIAAQIAPPERRGLH*
Ga0116217_108510382	3300009700	Peatlands Soil	RIDGWDIQGRWFGVIVGATPRTGELRRGETIPWRVIAVQIAPGERRGSR*
Ga0116219_100865031	3300009824	Peatlands Soil	RLDGWDIRGRWFGVVVGATPRTGEVARGETIPWRVIAAQIAPRERRGPR*
Ga0116223_102370932	3300009839	Peatlands Soil	AGGWDIRGRWFGVVVGATPRLGELRRGQTIPWRVIAAQIAPRERRGSR*
Ga0074044_102403381	3300010343	Bog Forest Soil	LTGADVRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPRERRGSR*
Ga0126378_108837311	3300010361	Tropical Forest Soil	RIDGWDIRGRWFGVVVGATPRLGELRRGETIPWSVIAAQITPPKRRGSR*
Ga0126379_119732721	3300010366	Tropical Forest Soil	ELTAVDGRAGGWDTRGRWFGVVVGATPRLGALRRGETIPWRVIAALIAPRERRGSR*
Ga0134125_122255612	3300010371	Terrestrial Soil	WDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQLEPRGHRGSRSRDGT*
Ga0134128_113716592	3300010373	Terrestrial Soil	WDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQFAPRERRGSR*
Ga0134128_124120281	3300010373	Terrestrial Soil	ISGGRWFGVVVGAMPRLGELRRGETIPWRVIAAQLAPRGRRSSR*
Ga0126381_1017977051	3300010376	Tropical Forest Soil	DVRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPRDRGGSR*
Ga0126381_1022775062	3300010376	Tropical Forest Soil	WDVRGRWFGVVVAATPRIGELSRGETIPWRVIAAQIAPGGPPGVR*
Ga0136449_1002896005	3300010379	Peatlands Soil	MSSGVGVRIDGWDIRGRWFGVVVGATPRTGELPRGETIPWRVIAAQIAPRERRSSR*
Ga0136449_1005428911	3300010379	Peatlands Soil	LTGVDVRIDGWDIRGRWFGVVVGATPRTGELPRGQTIPWRVIAAQIAPRECRGSR*
Ga0136449_1010434602	3300010379	Peatlands Soil	MSSGVDVRIDGWDIRGRWFGVVVGATPRLGELQRGQTIPWRVIAAQIAPGERRGPR*
Ga0136449_1017124002	3300010379	Peatlands Soil	VDVRIDGWDIRGRWFGVVVGATPRTGELRRGETIPWRMIAAQIAPRGRRGSR*
Ga0136449_1021413532	3300010379	Peatlands Soil	TGLDVRIDGWDIRGRWFGVVVGATPRLGKLRRGETIPWRVIAAQIAPGERRGSR*
Ga0136449_1030893992	3300010379	Peatlands Soil	MSSGVDVRIEGWDIRRRWFGVVVGVTPRLGELRRGETVSWRVIATLIAPRERRGSR*
Ga0136449_1038401692	3300010379	Peatlands Soil	GVDVRIDGWDIRGRWFGVVVGATPRTGELRRGETIPWRVIAAQLAPREHRGSR*
Ga0136449_1041931951	3300010379	Peatlands Soil	VRIDGWDIRGRWFGVVVGATPRLGELPRGETIPWRVIAAQLAPGERRGSR*
Ga0126383_125321211	3300010398	Tropical Forest Soil	RGRWFGVVVGATPRLGELRRGETITWRVIAAQIAPPERPALR*
Ga0126350_107096401	3300010880	Boreal Forest Soil	TGVDVRIDGWDIRGRWFGVVVGATPRTGELRRGQTIPWRVIAAQLAPRERRGSR*
Ga0137378_112821802	3300012210	Vadose Zone Soil	DELTGVDVRTDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPPHRRGFRRSR
Ga0137377_105917491	3300012211	Vadose Zone Soil	MSSITGVDVRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPRERRGSR*
Ga0137377_113318161	3300012211	Vadose Zone Soil	GGWDIRGRWFGSVVGATPRLGELRRGETIPRRVIAAQLAPRERRRSR*
Ga0137385_111239131	3300012359	Vadose Zone Soil	LTGVDVRADGWDIRGRWFGVVVGATPRLGALRRGETIPWRMIAALIAPPGRGGSR*
Ga0157341_10246811	3300012494	Arabidopsis Rhizosphere	ELTGSDVRVDGWDIRGRWFGVVVGATPRLGELPRGQTIPWRVIAAQIAPRERRGSR*
Ga0157374_120943391	3300013296	Miscanthus Rhizosphere	MNTGVDVRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQLASRGHRGSR*
Ga0157374_120943392	3300013296	Miscanthus Rhizosphere	VRIDGWDIPGRWFGVVVGATLRLGELPRGQTIPWRVIAAQLAPRDRRGSR*
Ga0157376_117791391	3300014969	Miscanthus Rhizosphere	LCREELTGVDIRVDGWDIRGRWFGVVVGATPRTGELPRGQTIPWRVIAAQFAPRERRGLR
Ga0187812_12589761	3300017821	Freshwater Sediment	DGWDIRGRWFGVVVGATPRLGELRRGETIPWRVFAAQLAPDQRRGSR
Ga0187807_10417591	3300017926	Freshwater Sediment	ELTGVDVRIDGWDIRGRWFGVVVGATPRTGELRRGETIPWHVIAAQLAPRERRGPR
Ga0187806_12438481	3300017928	Freshwater Sediment	GRWFGMVIGTTPRLGELRRGQTIPWRVFAAQIAPGEHRDPRWPDSPP
Ga0187806_13316002	3300017928	Freshwater Sediment	MSSGVDVRTGGWDIRARWFGVVVGATPRTGELPRGETIPWRMIAAQIAPREHRGPRSPD
Ga0187814_102040631	3300017932	Freshwater Sediment	MSSGVDVRTDGWDIRARWFGVVVGATPRTGELPRGETIPWRMIAAQIAPREHRGP
Ga0187801_100686144	3300017933	Freshwater Sediment	GVDVRIEGWDIRGRWFGVLVGATPRLGELRRGETISWRVIAAQVAPGERSGSR
Ga0187809_101736642	3300017937	Freshwater Sediment	DELTGVDIRVDGWDIRGRWFGVVVGATPRTGELPRAETIPWRIIAAQIAPGERRGSR
Ga0187819_102592381	3300017943	Freshwater Sediment	VDVRVDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQITPRERRGSHRPDGIPS
Ga0187817_102565282	3300017955	Freshwater Sediment	GWDIRGRWFGVVVGATPRTGELRRGETIPWRVIAAQIAPGERRGSR
Ga0187805_102594352	3300018007	Freshwater Sediment	LCRDELTGVDVRVDGWDIRGRWFGVVVGATPRTGELPRAETIPWRIIAAQIAPGERRGSR
Ga0187887_103719662	3300018043	Peatland	RDELTGADVRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQIAPCERRGSH
Ga0187766_106266442	3300018058	Tropical Peatland	VLVLSVDGWDIRGRWFGVVVATPRLGELRRGETIPWRVIAAQIAGSERRGSS
Ga0187769_101370253	3300018086	Tropical Peatland	CREELTGLDVRINGWDIRGRWFGVVVGATPRLGELRRAETIPWRVIAAQIAPRERRSSR
Ga0187769_103128064	3300018086	Tropical Peatland	HRSWDTRGRWFGVVVGATPRTGDLLRGETIPWRVIVAQIAPRERHSSR
Ga0210399_102515431	3300020581	Soil	VRTDGWNIRGRWFGVVIGATPRLGELRRGETISWRMIAAQIAPRERRGLR
Ga0210395_109825643	3300020582	Soil	DVRVDGWDIRGRWFGVVVGATPRLRELRRGETIPWRVIAAQIAPRERHDSR
Ga0210401_113676451	3300020583	Soil	ADVRTGGWDIRGRWFGVVVGATPRTGELPRGHTIPWRMIAAQIAPGERRGSR
Ga0210397_103272343	3300021403	Soil	RDELTGVDVRIDGWDIRGRWFGVVVGATPRLGELQRGETIRWRAIAAQIAPRERRDSR
Ga0210386_101201481	3300021406	Soil	CRDELSGIDVRGDGWDIRGRWFGVVVEATPRLGALPRGETVSWRMIASLIAPRERRGSR
Ga0210383_105868141	3300021407	Soil	LCRDELTGVDVRIDGWDIRGRWFGVVAGATPRTGELPRGQMIPWRVIAAHIAPREGRSSR
Ga0210384_117367682	3300021432	Soil	YRWDMRGRWFGVVVAATPRLGELRRGEMIPWRVIAAQIAPRERRGSR
Ga0210390_105605281	3300021474	Soil	FRDELTGVDVRTGGWDIRGRWFGVVVGATPRTGELPRGETIPWRVVAAQIAAIARYQR
Ga0210390_113794871	3300021474	Soil	MATGVDVRTGGWDIRGRWFGVVVGTTPRLGELRRGEVIPWRMVAAQLAPRERRGPR
Ga0210410_111588152	3300021479	Soil	DELTGVDVRIDGWDIRGRWFGVVVEATPRLGELRRGETIPWRVIAAQLAPCDRRGSR
Ga0207699_112007681	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GVDVCIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRAIAAQIAPRERRGSR
Ga0207665_100042161	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	IRGRWFGVVVGATPRLGELRRGETIPWRVIAAQLAPRGHLGSRSRDGT
Ga0207679_120021021	3300025945	Corn Rhizosphere	RVDGWDIRGRWFGVVVGATPRTGELPRGQTIPWRVIAAQFAPRERRGSR
Ga0209839_100112864	3300026294	Soil	VCRDELTGVDVRIDGWDIRGRWFGAVVGATPRLGELRRAETIPWRVIAAQIAPRERRGSC
Ga0209156_103425282	3300026547	Soil	TGADVRTGGWDIRGRWFGLVVAATPRLGERRRGETIPRRVIAAQIAPRERRGSR
Ga0208199_10164201	3300027497	Peatlands Soil	VRIDGWDIRGRWFGVVVGATPRLGELPRGQMIPWRVIAAQIAPGERRSSR
Ga0208696_10112031	3300027696	Peatlands Soil	NTGLDVRIDGWDIRGRWFGVVVGATPRLGKLRRGETIPWRVIAAQIAPGERRGSR
Ga0209448_102001461	3300027783	Bog Forest Soil	VDVRIGGWDIRGRWFGVVIQATPRLGALPRGETIPWRVIASLITPREHRGSR
Ga0209656_102020732	3300027812	Bog Forest Soil	MNTGVDVRIDGWDMRGRWFGVVVGATARAGELRRGETIPWRAIAAQIAPREHSGLR
Ga0308309_100708962	3300028906	Soil	DGWDIRGRWFGVVVGATPRIGELQRGETIPWRVIAAQIAPRERRGSR
Ga0318528_101814411	3300031561	Soil	LTGVDARDGWDTRARCFGVVVGATPRLGELRRGEPIPWRVIAAQIAPRERRSSR
Ga0318572_101362434	3300031681	Soil	WDIRGRWFGVVVVATPRLGQLRRGETIPWRVIAAQLAPRQGRGLR
Ga0318502_107528151	3300031747	Soil	DVRSDGWDIRGRWFGVVVVATPRLGQLRRGETIPWRVIAAQLAPRQGRGLR
Ga0318502_109176781	3300031747	Soil	DQLTGVDIRIDGWDIRGRWFGVIVGATPRLGELRRGETIPWRVIATQIAPPERRGPLR
Ga0307477_105491971	3300031753	Hardwood Forest Soil	TRTCGNCAATSSGVDARIDGWDIRSRWFGVVVGATPQTGELPHGETIPWQVISAQIALRERRSPR
Ga0318554_107050071	3300031765	Soil	DELTGVDVRIDGWDVRGRWFGVVVGATPRLGELRRGETIPWLVIAAQIAPREHRGSP
Ga0318521_100183251	3300031770	Soil	DVRVDGWDIRGRWFGVVVGATPRTGELRRGETISWRVIAAQIAPRERRS
Ga0318521_102042422	3300031770	Soil	IRGRWFGVVVGATPRTGELPRGQTIPWRVIAAQITPRERRGSHRPDGTSS
Ga0318566_100859291	3300031779	Soil	PDELTGVDARDGWDTRARCFGVVVGATPRLGELRRGEPIPWRVIAAQIAPRERRSSR
Ga0318523_104934881	3300031798	Soil	CRDELTGVDVRIEGWDIRGRWFGVVVGATPRTGELRPGETIPWRVIAAQIASRERRGFR
Ga0318497_106980401	3300031805	Soil	ELTGLDVHIDGWDIRGRWFGVVVGATPRLGELRRGQTIPWRVIAAQLAPGERRGSR
Ga0318564_100443663	3300031831	Soil	VDVRVDGWDIRGRWFGVVVGATPRTGELRRGETIPWRVIAAQIAPRERRSSR
Ga0318544_101981871	3300031880	Soil	DVRVDGWDIRGRWFGVVVGATPRTGELRRGETIPWRVIAAQIAPRERRSSR
Ga0318544_102886342	3300031880	Soil	DELTGVDIRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWSVIAAQIEPRERRSSS
Ga0318551_104352291	3300031896	Soil	VADGRDELTSVDIRTRGWDIRGHWFGVVVGATPRLGELRRGETTPCRVIAAPIAPRERHSPR
Ga0306923_108502223	3300031910	Soil	DVRVDGWDIRGRWFGVVVGATPRTGELRRGETISWRVIAAQIAPRERRSWR
Ga0318530_100596341	3300031959	Soil	QLCRDELTGVDVRVDGWDIRGRWFGVVVGATPRTGELRRGETIPWRVIAAQIAPRERRSS
Ga0318575_102656442	3300032055	Soil	GWDIRGRWFGVIVGATPRLGELRRGETIPWRVIATQIAPPERRGPLR
Ga0306920_1032226951	3300032261	Soil	DELTGVDVRAGGWDIRGRWFGVVIGATPRLGKLRRGETITWRVIAAQITPPERRGSR
Ga0335085_121128741	3300032770	Soil	VDVRIDGWDIRGRWFGVVVGATPRLGKLPRGQMIPWRVIAAQIAPRERRGSR
Ga0335082_106845542	3300032782	Soil	GVDVRLDGWDIRGRWFGLVVGATPRLGELRRGEAIPWQVIAAQLAPHARRGSR
Ga0335082_114768181	3300032782	Soil	WDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQLVPRGHRGSRSRDGT
Ga0335079_114746161	3300032783	Soil	VPRGAHRVDVHVDGWDIRGRWFGVVVAATPRLGELRRGETIPWRVIAAQMAQRERRGSR
Ga0335078_117357812	3300032805	Soil	DGWDIRGRWFGVVVGATPRLGELRRGETIPWRVIAAQLVPRGHRGSRSRDGT
Ga0335078_122468371	3300032805	Soil	RDELTGVDVRIDGWDIRGRWFGVVVEATPRLGELRRGETIPWRVIAAQIAPCERRGSR
Ga0335081_123688711	3300032892	Soil	EGWDIRGRWFGVVVAATPRLGELRRGETIPWRVIAAQLAPRERRSSR
Ga0335073_113915632	3300033134	Soil	GVDVRIDGWDIRGRWFGVVVGATPRLGELRRGETIPWRVVAAQIAPGELRGSR
Ga0335077_120927772	3300033158	Soil	RDNTGADVRTGGWDIRGRWFGVAVGATPRLGELRRGQTIPWRVIAAQIAPRECHGSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077635

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences