Metagenome / Metatranscriptome Family F077625

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077625
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	42 residues
Representative Sequence	GATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFA
Number of Associated Samples	104
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.87 %
% of genes near scaffold ends (potentially truncated)	95.73 %
% of genes from short scaffolds (< 2000 bps)	93.16 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.641 % of family members)
Environment Ontology (ENVO)	Unclassified (28.205 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.120 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00210	Ferritin	10.26
PF01068	DNA_ligase_A_M	7.69
PF01471	PG_binding_1	5.98
PF01035	DNA_binding_1	3.42
PF00890	FAD_binding_2	3.42
PF06627	DUF1153	1.71
PF02954	HTH_8	1.71
PF13193	AMP-binding_C	1.71
PF00754	F5_F8_type_C	0.85
PF03711	OKR_DC_1_C	0.85
PF00239	Resolvase	0.85
PF01594	AI-2E_transport	0.85
PF12085	DUF3562	0.85
PF04828	GFA	0.85
PF00593	TonB_dep_Rec	0.85
PF00990	GGDEF	0.85
PF04679	DNA_ligase_A_C	0.85
PF13340	DUF4096	0.85
PF07311	Dodecin	0.85
PF16518	GrlR	0.85
PF14259	Obsolete Pfam Family	0.85
PF12833	HTH_18	0.85
PF09361	Phasin_2	0.85
PF00355	Rieske	0.85
PF00872	Transposase_mut	0.85
PF04072	LCM	0.85
PF03473	MOSC	0.85
PF00011	HSP20	0.85
PF06628	Catalase-rel	0.85
PF05015	HigB-like_toxin	0.85
PF03050	DDE_Tnp_IS66	0.85
PF00440	TetR_N	0.85
PF05598	DUF772	0.85
PF10276	zf-CHCC	0.85
PF02812	ELFV_dehydrog_N	0.85
PF00196	GerE	0.85
PF00072	Response_reg	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	8.55
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	7.69
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	3.42
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	3.42
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.85
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.85
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.85
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.85
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.85
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.85
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.85
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.85
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.85
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.04 %
Unclassified	root	N/A	30.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.37 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.71 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	11.97 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.11 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.11 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.85 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.85 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.85 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.11 %
Prochlorotrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples	0.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.11 %
uncultured Sphingomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	0.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Prochlorothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Prochlorothrix	0.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.11 %
Prochlorothrix hollandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Prochlorothrix → Prochlorothrix hollandica	0.85 %
uncultured Sphingomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	0.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101054165	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300002245\|JGIcombinedJ26739_100577057	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300003505\|JGIcombinedJ51221_10180752	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300004139\|Ga0058897_11015172	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005187\|Ga0066675_10344609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1088	Open in IMG/M
3300005435\|Ga0070714_102495977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Prochlorothrix → Prochlorothrix hollandica	502	Open in IMG/M
3300005556\|Ga0066707_10001305	All Organisms → cellular organisms → Bacteria → Proteobacteria	9280	Open in IMG/M
3300005602\|Ga0070762_10648494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	705	Open in IMG/M
3300005764\|Ga0066903_104561102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300006032\|Ga0066696_10077270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1945	Open in IMG/M
3300006174\|Ga0075014_100619691	Not Available	621	Open in IMG/M
3300006175\|Ga0070712_100626360	Not Available	912	Open in IMG/M
3300006755\|Ga0079222_10972729	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300006796\|Ga0066665_10213943	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300006797\|Ga0066659_10776252	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300006806\|Ga0079220_11231996	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300006894\|Ga0079215_10070591	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300009143\|Ga0099792_10204222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1126	Open in IMG/M
3300009143\|Ga0099792_10913067	Not Available	582	Open in IMG/M
3300009147\|Ga0114129_13185891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300010046\|Ga0126384_10137250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1865	Open in IMG/M
3300010337\|Ga0134062_10684505	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300010361\|Ga0126378_10124918	All Organisms → cellular organisms → Bacteria	2584	Open in IMG/M
3300010376\|Ga0126381_103156275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300010403\|Ga0134123_11096419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300010868\|Ga0124844_1313805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	521	Open in IMG/M
3300011120\|Ga0150983_13210962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300012021\|Ga0120192_10109084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300012022\|Ga0120191_10171301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300012169\|Ga0153990_1019826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1494	Open in IMG/M
3300012203\|Ga0137399_10798030	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300012207\|Ga0137381_11354614	Not Available	604	Open in IMG/M
3300012208\|Ga0137376_10210784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300012212\|Ga0150985_116369070	Not Available	518	Open in IMG/M
3300012918\|Ga0137396_10712436	Not Available	740	Open in IMG/M
3300012925\|Ga0137419_10608114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300012987\|Ga0164307_11088677	Not Available	656	Open in IMG/M
3300016270\|Ga0182036_11223181	Not Available	625	Open in IMG/M
3300016294\|Ga0182041_10561173	Not Available	998	Open in IMG/M
3300016294\|Ga0182041_11110128	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300016357\|Ga0182032_11048420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300016357\|Ga0182032_11930050	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300016371\|Ga0182034_10329671	Not Available	1233	Open in IMG/M
3300016387\|Ga0182040_10045735	All Organisms → cellular organisms → Bacteria → Proteobacteria	2687	Open in IMG/M
3300016387\|Ga0182040_10742359	Not Available	805	Open in IMG/M
3300016422\|Ga0182039_10474144	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300018433\|Ga0066667_11155183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300018468\|Ga0066662_12818941	Not Available	516	Open in IMG/M
3300019882\|Ga0193713_1202154	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300020580\|Ga0210403_10300358	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300021086\|Ga0179596_10253951	Not Available	869	Open in IMG/M
3300021168\|Ga0210406_10087763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2654	Open in IMG/M
3300021168\|Ga0210406_10516239	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300021178\|Ga0210408_10303702	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300021178\|Ga0210408_10527023	Not Available	938	Open in IMG/M
3300021178\|Ga0210408_11126609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300021402\|Ga0210385_10325486	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300021403\|Ga0210397_10809565	Not Available	723	Open in IMG/M
3300021405\|Ga0210387_10978963	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300021420\|Ga0210394_11058177	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300021559\|Ga0210409_10426359	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300021559\|Ga0210409_10752748	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300021560\|Ga0126371_11152201	Not Available	913	Open in IMG/M
3300022557\|Ga0212123_10851170	Not Available	542	Open in IMG/M
3300025898\|Ga0207692_10222200	Not Available	1120	Open in IMG/M
3300025928\|Ga0207700_10831470	Not Available	826	Open in IMG/M
3300026369\|Ga0257152_1026974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300026529\|Ga0209806_1121587	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300026555\|Ga0179593_1106883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1941	Open in IMG/M
3300026984\|Ga0208732_1016538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	646	Open in IMG/M
3300027105\|Ga0207944_1009093	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300027173\|Ga0208097_1022713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300027173\|Ga0208097_1029720	Not Available	628	Open in IMG/M
3300027326\|Ga0209731_1048433	Not Available	641	Open in IMG/M
3300027651\|Ga0209217_1216274	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300027783\|Ga0209448_10042440	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300027855\|Ga0209693_10502224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300027882\|Ga0209590_10836815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300027889\|Ga0209380_10417325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300027907\|Ga0207428_11065340	Not Available	566	Open in IMG/M
3300030916\|Ga0075386_12127103	Not Available	893	Open in IMG/M
3300031122\|Ga0170822_11426360	Not Available	800	Open in IMG/M
3300031128\|Ga0170823_15456415	Not Available	1027	Open in IMG/M
3300031231\|Ga0170824_123882663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	793	Open in IMG/M
3300031446\|Ga0170820_17620854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300031572\|Ga0318515_10442729	Not Available	695	Open in IMG/M
3300031573\|Ga0310915_11197363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300031718\|Ga0307474_10873262	Not Available	712	Open in IMG/M
3300031723\|Ga0318493_10074680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1660	Open in IMG/M
3300031744\|Ga0306918_10964863	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300031753\|Ga0307477_10789435	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300031781\|Ga0318547_10007246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4858	Open in IMG/M
3300031805\|Ga0318497_10064822	Not Available	1910	Open in IMG/M
3300031819\|Ga0318568_10987916	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300031833\|Ga0310917_10189255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1373	Open in IMG/M
3300031908\|Ga0310900_10222704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1341	Open in IMG/M
3300031910\|Ga0306923_11174354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	822	Open in IMG/M
3300031912\|Ga0306921_12258699	Not Available	572	Open in IMG/M
3300031941\|Ga0310912_10348093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1151	Open in IMG/M
3300031942\|Ga0310916_10325908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1303	Open in IMG/M
3300031954\|Ga0306926_10701499	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300031981\|Ga0318531_10261266	Not Available	782	Open in IMG/M
3300032001\|Ga0306922_10537193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1244	Open in IMG/M
3300032043\|Ga0318556_10020826	Not Available	2931	Open in IMG/M
3300032043\|Ga0318556_10375621	Not Available	744	Open in IMG/M
3300032054\|Ga0318570_10548307	Not Available	527	Open in IMG/M
3300032091\|Ga0318577_10283416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300032091\|Ga0318577_10373563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	681	Open in IMG/M
3300032094\|Ga0318540_10311532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300032180\|Ga0307471_102129599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	705	Open in IMG/M
3300032205\|Ga0307472_101234229	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300032261\|Ga0306920_100822217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1362	Open in IMG/M
3300032261\|Ga0306920_101662004	Not Available	906	Open in IMG/M
3300032261\|Ga0306920_102150577	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300032828\|Ga0335080_11742253	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.73%
Host-Associated	Host-Associated	4.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.16%
Plants	Host-Associated → Plants	3.42%
Aquatic	Environmental → Aquatic	2.56%
Fungi	Host-Associated → Fungi	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%
Freshwater	Environmental → Aquatic → Freshwater	0.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Sediment	Environmental → Aquatic → Sediment	0.85%
Mycelium	Host-Associated → Fungi → Mycelium	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.21%
Loam	Environmental → Terrestrial → Soil → Loam	17.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027105	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1010541651	3300000956	Soil	EYTFSPRGATYQREEQRLNLHRVSHLRLTIVPNKNGSGTATLTALRLFA*
JGI12627J18819_100078323	3300001867	Forest Soil	LVQEYNFNPRGATFQREELRFNRLQASRLRFTIVPNKNGSGTATITALRLFA*
JGIcombinedJ26739_1005770571	3300002245	Forest Soil	SPRGATYQREEQRLDLDRVTHLRLAIVPNKNGSGTATLTALHLFA*
JGIcombinedJ51221_101807521	3300003505	Forest Soil	TYQREKQRFDLHGVTHLRLTIVPNKSGSGTATLTALRLFA*
Ga0058897_110151722	3300004139	Forest Soil	QDYTFSPRGATYQREEQSFTRVLATHLRLTIVPNKNGHGPATLTALRLFA*
Ga0066675_103446093	3300005187	Soil	TYQREDQRVNLRQVTHLRLTIVPNKSGSGTATLTTLRLFA*
Ga0070714_1024959771	3300005435	Agricultural Soil	GGATYQREEQRFNLRQVTHLRLTIVSNKRGSGTATLTALRLFG*
Ga0066707_100013051	3300005556	Soil	QHEELRLELPAITHLSLTIVPNKSGSGIASLTALRLFA*
Ga0070762_106484941	3300005602	Soil	REEQRFNLRQVTHLRLTIVPNKSGSGTASLTALRLFA*
Ga0066903_1045611021	3300005764	Tropical Forest Soil	RQEQRLNLSQVSRLRLTIVPNKNGSGTATLTTFRLYA*
Ga0068860_1024687192	3300005843	Switchgrass Rhizosphere	GSTFQREDLSFNLPKVTHVRLTIVPNKGGTGTASLTSLRLFS*
Ga0066696_100772701	3300006032	Soil	AIFQHEELRLELPAITHLSLTIVPNKSGSGIASLTALRLFA*
Ga0075014_1006196912	3300006174	Watersheds	TYQREEQRFNLRQVTHLRLTFVPNKSGSGTAPLTALRLFA*
Ga0070712_1006263604	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YQREEQRFDLHRVTHLRLTIVPNKNNSGTATLTALRLFA*
Ga0079222_109727291	3300006755	Agricultural Soil	SPRGATYQREEQRLNLRHVSRLRLTIVPNKNGSGTATLTALRLFA*
Ga0066665_102139431	3300006796	Soil	SPGGATYQREEQRLNLLQASHLRLTIVPNKNGSGTATLTALGLFA*
Ga0066659_107762521	3300006797	Soil	QRFNLHGVTHLRLTIVPNKNGPGTVTLTALRLFV*
Ga0079220_112319961	3300006806	Agricultural Soil	ATFQREQQRFNLRRATHLLLTIVPNKSGSGVATLTSLHLFA*
Ga0079215_100705911	3300006894	Agricultural Soil	GATYQREEQRLNLHQVSHLRLTIVPNKSGSGTATLTSLRLFG*
Ga0099792_102042223	3300009143	Vadose Zone Soil	YQREEQRFNLRQVTHLRLTIVPNKNGAGTATITAIRLFA*
Ga0099792_109130671	3300009143	Vadose Zone Soil	PGGATYQHEEQRFNLLQVTHLRFTIVPNKSGSGTATLTALRLFA*
Ga0114129_131858911	3300009147	Populus Rhizosphere	TFSPRGATYQREEQRLNLHQVSHLRLTIVPNKHGSGTATLTALRLFA*
Ga0126384_101372501	3300010046	Tropical Forest Soil	ATYQREEQRFNVRQVTHLHLTIVPNKSGSGTATLTALRLFRLGA*
Ga0134062_106845051	3300010337	Grasslands Soil	QQYTFSPQGAIFQHEELRLELPAITHLSLTIVPNKSGSGVATLTALRLFA*
Ga0126378_101249181	3300010361	Tropical Forest Soil	EQRFNLRQVTHLRLTIVPNKSGSGTATLISLRLFA*
Ga0126381_1031562751	3300010376	Tropical Forest Soil	NFSPGGATYQREEQRFNVRQVTHLHLTIVPNKSGSGTATLTALRLFRLGA*
Ga0134123_110964191	3300010403	Terrestrial Soil	QEQRFDLRRVTHLRLVIVPNKSGSGTATLTALRLFA*
Ga0124844_13138052	3300010868	Tropical Forest Soil	DQRFKLYQVSHLRLTIVPNKNGSGAASLTALRLFA*
Ga0150983_132109621	3300011120	Forest Soil	REEQRFNLRQVNHLRLTIVPNKSGSGTATLTALRLFA*
Ga0120192_101090842	3300012021	Terrestrial	ATYQREEQRLNLHQVSHLRLTIVPNKSGSGTATLTSLRLFA*
Ga0120191_101713011	3300012022	Terrestrial	TSPPRGAPYQREEQRLNVHQVSHLRLTIVPNKNGSGTATLTALRLFA*
Ga0153990_10198261	3300012169	Attine Ant Fungus Gardens	GATYQREEQRFNLHQVSHLRFTIVPNKNGSGTATLTALRLFA*
Ga0137399_107980302	3300012203	Vadose Zone Soil	ATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALLLFA*
Ga0137381_113546141	3300012207	Vadose Zone Soil	FSPGGATYQHEEQRFNLLQVTHLRFTIVPNKNGSGTATLTALRLFA*
Ga0137376_102107843	3300012208	Vadose Zone Soil	FSPRGATFQREEQRFNLHGVTHLRFTIVPNKSGSGAASLTALRVFA*
Ga0150985_1163690701	3300012212	Avena Fatua Rhizosphere	REDLRLALQGVTHLRLVIIPHLRGSGTATLTCLELFA*
Ga0137396_107124362	3300012918	Vadose Zone Soil	AQEYNLTPGGATYQRGSQRCKLIQFTHPLLTIVPNKSGSGTATLTALRLFA*
Ga0137419_106081143	3300012925	Vadose Zone Soil	LSPGGATYQHEEQRFNLLQVTHLRFTIVPNKNGSGTATLTALRLFA*
Ga0164307_110886771	3300012987	Soil	ATYQREEQRFDLHRVTHLRLTIVPNKNNSGTATLTALRLFA*
Ga0182036_112231811	3300016270	Soil	RGATYQREELRFNLLQVSRLRLTVVPNKNGSGTATLTTLRLFA
Ga0182041_105611731	3300016294	Soil	EQRLNLHQVSHLRLTIVPNKNGSGTATLTSLRLFA
Ga0182041_111101282	3300016294	Soil	REEQRFNLRQVTHLRLTIVPNKSGSGTATLTALSLFA
Ga0182032_110484202	3300016357	Soil	QREEQRFNLSRVSQLRLTIVPNKNGSGTATLTTLRLYA
Ga0182032_119300502	3300016357	Soil	TYQREEQRLDLDRVTHLRLTIVPNKNGSGTATLTALRLFA
Ga0182034_103296712	3300016371	Soil	EYNFSPRGATFQREEQRFNLHGVTHLRLTIVPNKNGSGTASLVPIHKE
Ga0182040_100457351	3300016387	Soil	FSPGGATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALSLFA
Ga0182040_107423592	3300016387	Soil	REDQRFNLPRASRLRLTIVPNKNGSGTATLTLLRLFA
Ga0182039_104741442	3300016422	Soil	GATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALSLFA
Ga0066667_111551832	3300018433	Grasslands Soil	FSPGGATYQREDQRVNLRQVTHLRLTIVPNKSGSGTATLTTLRLFA
Ga0066662_128189411	3300018468	Grasslands Soil	EEQRFDLHGVTHLRLTIVPNKNGSGTAILTALRLFA
Ga0193713_12021542	3300019882	Soil	AIFQHEELRLELPAVTHLSLIIVPNKSGSGVATLTALRLFA
Ga0210403_103003582	3300020580	Soil	MEDVVVLIDRPRGATYQREEQRFNLPQVTHLRLTIVPNKSGSGTVTLTRLRLFA
Ga0179596_102539511	3300021086	Vadose Zone Soil	GGATYQREEQRFNLRQVTHLRLTLVPNKSGSGTASLTALRLFA
Ga0210406_100877638	3300021168	Soil	GGATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFG
Ga0210406_105162391	3300021168	Soil	MKDLYQREELRFNLQGVTHLRLTIVPNKSGSGTATLTALRLFA
Ga0210408_103037021	3300021178	Soil	NFSPGGATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFA
Ga0210408_105270233	3300021178	Soil	PGGATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFG
Ga0210408_111266091	3300021178	Soil	NFSPGGATYQREEQRFNLRQVNHLRLTIVPNKSGSGTATLTALRLFA
Ga0210385_103254861	3300021402	Soil	FQHEELRLELPAITHLSLTIVPNKSGSGVATLTALRLFN
Ga0210397_108095651	3300021403	Soil	ATYQREEQSFTRVLATHLRLTIVPNKNGHGPATLTALRLFP
Ga0210387_109789632	3300021405	Soil	YNFRPGGATYQREELRFNLRGVTHLRLTIVPHKSGSGTATLTALRLFA
Ga0210394_110581771	3300021420	Soil	QREKQRLDLHRVNHLRLTIVPNKNGSGTATLTALRLLA
Ga0210409_104263593	3300021559	Soil	ATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFG
Ga0210409_107527482	3300021559	Soil	RGATYQREEQRLDLDWVTHLRLIIVPNKNGSSTATLTALRLFA
Ga0126371_111522012	3300021560	Tropical Forest Soil	GATYQREEQRFNLRQVTHLRLTIVPNRGGSGTATLTALRLFA
Ga0212123_108511701	3300022557	Iron-Sulfur Acid Spring	QREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFA
Ga0207692_102222001	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EQRLNLRQVTHLRLTIVPNKSGSGTATLTALRLFA
Ga0207700_108314703	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ATYQREEQRFDLHRVTHLRLTIVPNKNNSGTATLTALRLFA
Ga0257152_10269741	3300026369	Soil	PGGATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALLLFA
Ga0209806_11215871	3300026529	Soil	EELRLELPAITHLSSAIVPNKSGSGIASLTALRLFA
Ga0179593_11068834	3300026555	Vadose Zone Soil	FSPGGATYQREEQRVNLRQVTHLRLTIVPNKSGSGTATLTTLRLFA
Ga0208732_10165382	3300026984	Forest Soil	LVQEYTFSPRGATYQREEQRFNLHQVSHLRFTIVPNKNGSGTATLTALRLFA
Ga0207944_10090932	3300027105	Forest Soil	TYQREEQRLDLDRVTHLRLTIVPNKNGSGTATLTALRLSA
Ga0208097_10227131	3300027173	Forest Soil	EQRFNLHQVSHLRFTIVPNKNGSGTATLTALRLFA
Ga0208097_10297201	3300027173	Forest Soil	QREEQRFNLRQVSHLRLSIVPNKNGSGTSTLTALRLFA
Ga0209731_10484332	3300027326	Forest Soil	GGATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFA
Ga0209217_12162742	3300027651	Forest Soil	SPRGATYQREEQRLDLDRVTHLRLAIVPNKNGSGTATLTALHLFA
Ga0209448_100424403	3300027783	Bog Forest Soil	LVQEYTFSPGGGYQREEQRFNLLQASRLRLTIVPNKDGSGMATLTALRLFA
Ga0209693_105022242	3300027855	Soil	QREEQRFNLRQVNHLRLTIVPNKSGSGTATLTALRLFA
Ga0209590_108368151	3300027882	Vadose Zone Soil	FNPGGATYQREEQRFNLRQVTHLRLTIVPNKSGSGTAMLTALRLFA
Ga0209380_104173251	3300027889	Soil	YQREEQRFNLRQVNHLRLTIVPNKSGSGTATLTALRLFA
Ga0207428_110653401	3300027907	Populus Rhizosphere	TYQREEQRLNLHQVSHLRLTIVPNKNGSGTATLTALRLFA
Ga0075386_121271031	3300030916	Soil	GATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFA
Ga0170822_114263603	3300031122	Forest Soil	EEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRFFA
Ga0170823_154564151	3300031128	Forest Soil	YNFSPGGATYQREEQRFNLRQVTRLRLTIVPNRSGSGTATLTALCLFA
Ga0170824_1238826631	3300031231	Forest Soil	QREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFG
Ga0170820_176208541	3300031446	Forest Soil	ATYQGEEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFG
Ga0318515_104427291	3300031572	Soil	ELRFSRLQASCLRLTIVPNKNGSGTATLTTLRLFA
Ga0310915_111973633	3300031573	Soil	EQRFHLRQVSHLRLTIVPNKNGSGTATLTALRLFA
Ga0307474_108732622	3300031718	Hardwood Forest Soil	GGATYQREDQRFNLHQISHLRFTISPNKSGSGTATLTALRHFA
Ga0318493_100746803	3300031723	Soil	YQREDQRFNLHQISHLHFTISPNKGGSGTATLTALRLFA
Ga0306918_109648631	3300031744	Soil	QREDQRFDLRQVTHLRLTIVPNKSGSGPATLTALRLFA
Ga0307477_107894351	3300031753	Hardwood Forest Soil	YQREEQRFDLHGVTHLRLTIVPNKSGSGTATLTALRLFA
Ga0318547_100072467	3300031781	Soil	QREDLRFNLLQVNRLRLTIVPNKNGSGNATLTTLRLFA
Ga0318497_100648224	3300031805	Soil	HQLEDLRFNLLQVHRLRLTIVPNKNGSGNATLTTLRLFA
Ga0318568_109879161	3300031819	Soil	EYTFSPRGATYQREEQRFNLSQVSQLRLTIVPNKNGSGTATLTTLRLYA
Ga0310917_101892552	3300031833	Soil	TYQREEQRFNLSRVSHLRLTIVPNKNGSGTATLTTLRLYA
Ga0310900_102227043	3300031908	Soil	WRQVWYPRGATYQREEQGLNLHQVSHLRLTIVLNKNDSGTATLTALRLFA
Ga0306923_111743541	3300031910	Soil	PAGATYQREEQRLNFHQASHLRLTIVPNKNGSGTATLTSLRLFA
Ga0306921_122586992	3300031912	Soil	EDQRFNLPRASRLRLTIVPNKNGSGTATLTLLRLFA
Ga0310912_103480931	3300031941	Soil	GATYQREEQRFNLNRVSQLRLTIVPNKNGSGTATLTTLRLYA
Ga0310916_103259081	3300031942	Soil	ATYQREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALLLFA
Ga0306926_107014991	3300031954	Soil	PGGATYQREEHRFNLRQVTHLRLTIVPNKSGSGTATLTALSLFA
Ga0318531_102612661	3300031981	Soil	FSPRGATYQREELRFDRLQTSRLRLTIVPNKSGSGTATLTTLRLFA
Ga0306922_105371931	3300032001	Soil	RGATYQREEQRVNLRNVTHLRLTIVPNKNGSGTATLTAFRLYA
Ga0318556_100208265	3300032043	Soil	QILVQGYNFSPAGATHQREDLRFNLLQVNRLRLTIVPNKNGSGNATLTTLRLFA
Ga0318556_103756211	3300032043	Soil	GGATYQREEQRFNLRQVSHLRLTIVPNKNGSGTATLTALRLCA
Ga0318570_105483072	3300032054	Soil	ATYHREEQRFNLRQVTHLRLTIVPNKSGSGTATLTALRLFA
Ga0318577_102834162	3300032091	Soil	FSPGGATYQREDQRFNLPRASRLRLTIVPNKNGSGTAPLTALRLFA
Ga0318577_103735631	3300032091	Soil	FSPGGATYQREEQRLNLRQVTHLRLTIVPNKSGSGTATLTALLLFA
Ga0318540_103115322	3300032094	Soil	REEQRFNLSRVSQLRLTIVPNKNGSGTATLTTLRLYA
Ga0307471_1021295992	3300032180	Hardwood Forest Soil	VQEYTFSPQGAMFQHEELRLELPAVTHLSLIIVPNKSGSGVATLTALRLFA
Ga0307472_1012342291	3300032205	Hardwood Forest Soil	EQRLDLDRVTHLRLTIVPNKNGSDTATLTALRLFA
Ga0306920_1008222171	3300032261	Soil	FNPGGATYQREEQHFNLRQVSHLCLTIAPNKNGSGTATLTTFRLYA
Ga0306920_1016620041	3300032261	Soil	RGATYQHEEQRFNLRRVSHLRLTIVPNKNGSGTATLTALRLYA
Ga0306920_1021505772	3300032261	Soil	HGATFQREEQRVNLHRVTHLRLTIVPNKNGSGTASLTALRLFA
Ga0335080_117422531	3300032828	Soil	QGATFQHEDLRLDLPPITHLRLTIVPNKDGSGEATLTSLRLFA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077625

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences