Metagenome / Metatranscriptome Family F077623

Basic Information
Family ID	F077623
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	46 residues
Representative Sequence	KTVPLLEYYAGREWMFTVDGAQPPGAVHEEIVARLQKLTVFAAWS
Number of Associated Samples	104
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.27 %
% of genes near scaffold ends (potentially truncated)	94.02 %
% of genes from short scaffolds (< 2000 bps)	95.73 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (68.376 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.624 % of family members)
Environment Ontology (ENVO)	Unclassified (22.222 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.171 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.73% β-sheet: 0.00% Coil/Unstructured: 60.27%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00578	AhpC-TSA	5.13
PF02780	Transketolase_C	3.42
PF03706	LPG_synthase_TM	2.56
PF02786	CPSase_L_D2	2.56
PF07228	SpoIIE	2.56
PF00501	AMP-binding	1.71
PF00364	Biotin_lipoyl	1.71
PF04978	DUF664	1.71
PF11239	DUF3040	1.71
PF07690	MFS_1	1.71
PF03033	Glyco_transf_28	1.71
PF02452	PemK_toxin	0.85
PF00406	ADK	0.85
PF11272	DUF3072	0.85
PF02785	Biotin_carb_C	0.85
PF02518	HATPase_c	0.85
PF08240	ADH_N	0.85
PF01988	VIT1	0.85
PF13193	AMP-binding_C	0.85
PF07732	Cu-oxidase_3	0.85
PF00561	Abhydrolase_1	0.85
PF03610	EIIA-man	0.85
PF13560	HTH_31	0.85
PF06146	PsiE	0.85
PF01048	PNP_UDP_1	0.85
PF03814	KdpA	0.85
PF02583	Trns_repr_metal	0.85
PF05199	GMC_oxred_C	0.85
PF13302	Acetyltransf_3	0.85
PF03729	DUF308	0.85
PF13462	Thioredoxin_4	0.85
PF00929	RNase_T	0.85
PF13191	AAA_16	0.85
PF13672	PP2C_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	2.56
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.85
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.85
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.85
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.85
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.85
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	0.85
COG2060	K+-transporting ATPase, KdpA subunit	Inorganic ion transport and metabolism [P]	0.85
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.85
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.85
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.85
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.85
COG3223	Phosphate starvation-inducible membrane PsiE (function unknown)	General function prediction only [R]	0.85
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.38 %
Unclassified	root	N/A	31.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.38 %
Unclassified	root	N/A	31.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.38 %
Unclassified	root	N/A	31.62 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.15 %
Unclassified	root	N/A	31.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.44 %
Unclassified	root	N/A	31.62 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.17 %
Unclassified	root	N/A	31.62 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.40 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.85 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.40 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.84 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.42 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.71 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.85 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.85 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.40 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5.98 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.42 %
Marmoricola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola	0.85 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.85 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	0.85 %
Planobispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora	0.85 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.40 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	2.56 %
Marmoricola endophyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola endophyticus	0.85 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.85 %
Streptomyces longispororuber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longispororuber	0.85 %
Mycobacteroides abscessus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus	0.85 %
Planobispora longispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora longispora	0.85 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.40 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	2.56 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.85 %
Marmoricola endophyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola endophyticus	0.85 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.85 %
Streptomyces longispororuber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longispororuber	0.85 %
Planobispora longispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora longispora	0.85 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01EU4WR	Not Available	503	Open in IMG/M
3300004152\|Ga0062386_101707495	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300004633\|Ga0066395_10569284	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005435\|Ga0070714_100616831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1042	Open in IMG/M
3300005436\|Ga0070713_100922187	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005468\|Ga0070707_100618417	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300005610\|Ga0070763_10084604	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300005610\|Ga0070763_10132554	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300005610\|Ga0070763_10228098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300006174\|Ga0075014_100720766	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300006640\|Ga0075527_10094806	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300006804\|Ga0079221_10288924	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300006893\|Ga0073928_10393349	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300009646\|Ga0116132_1157303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	692	Open in IMG/M
3300009672\|Ga0116215_1270670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	741	Open in IMG/M
3300009683\|Ga0116224_10352400	Not Available	700	Open in IMG/M
3300009700\|Ga0116217_10977839	Not Available	518	Open in IMG/M
3300010048\|Ga0126373_11478507	Not Available	745	Open in IMG/M
3300010341\|Ga0074045_10598784	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300010880\|Ga0126350_11049806	Not Available	669	Open in IMG/M
3300012951\|Ga0164300_10859210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	569	Open in IMG/M
3300014654\|Ga0181525_10871907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	510	Open in IMG/M
3300016445\|Ga0182038_10330772	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300017928\|Ga0187806_1130345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300017932\|Ga0187814_10303417	Not Available	611	Open in IMG/M
3300017946\|Ga0187879_10536765	Not Available	649	Open in IMG/M
3300017970\|Ga0187783_10988513	Not Available	606	Open in IMG/M
3300017974\|Ga0187777_10651139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300017975\|Ga0187782_10230921	Not Available	1388	Open in IMG/M
3300018020\|Ga0187861_10046612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2293	Open in IMG/M
3300018033\|Ga0187867_10208918	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300018037\|Ga0187883_10130927	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300018038\|Ga0187855_10578443	Not Available	654	Open in IMG/M
3300018043\|Ga0187887_10767264	Not Available	570	Open in IMG/M
3300020582\|Ga0210395_10753412	All Organisms → cellular organisms → Bacteria → Terrabacteria group	727	Open in IMG/M
3300020583\|Ga0210401_11090958	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300020583\|Ga0210401_11482537	Not Available	536	Open in IMG/M
3300021170\|Ga0210400_11167467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300021181\|Ga0210388_10414259	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300021401\|Ga0210393_11093594	All Organisms → cellular organisms → Bacteria → Terrabacteria group	644	Open in IMG/M
3300021401\|Ga0210393_11677095	Not Available	503	Open in IMG/M
3300021402\|Ga0210385_11405857	Not Available	534	Open in IMG/M
3300021405\|Ga0210387_10171254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1870	Open in IMG/M
3300021407\|Ga0210383_11735813	Not Available	510	Open in IMG/M
3300021433\|Ga0210391_10088421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2445	Open in IMG/M
3300021433\|Ga0210391_10201792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1564	Open in IMG/M
3300021474\|Ga0210390_11417910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora longispora	553	Open in IMG/M
3300021475\|Ga0210392_11054820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	609	Open in IMG/M
3300021860\|Ga0213851_1554222	Not Available	601	Open in IMG/M
3300024288\|Ga0179589_10271288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	758	Open in IMG/M
3300025576\|Ga0208820_1030131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1660	Open in IMG/M
3300025588\|Ga0208586_1049942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola endophyticus	948	Open in IMG/M
3300025906\|Ga0207699_10514653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	865	Open in IMG/M
3300025910\|Ga0207684_10810205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	791	Open in IMG/M
3300025915\|Ga0207693_10220799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1489	Open in IMG/M
3300025915\|Ga0207693_10515121	Not Available	933	Open in IMG/M
3300025922\|Ga0207646_11196002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	666	Open in IMG/M
3300025928\|Ga0207700_10309344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1366	Open in IMG/M
3300025928\|Ga0207700_11769984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	544	Open in IMG/M
3300025929\|Ga0207664_11543140	Not Available	586	Open in IMG/M
3300026217\|Ga0209871_1040468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	880	Open in IMG/M
3300026557\|Ga0179587_10391649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	905	Open in IMG/M
3300027768\|Ga0209772_10034092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1487	Open in IMG/M
3300027857\|Ga0209166_10024114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3756	Open in IMG/M
3300027898\|Ga0209067_10644109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	611	Open in IMG/M
3300027905\|Ga0209415_11087486	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300029951\|Ga0311371_10727019	Not Available	1241	Open in IMG/M
3300029999\|Ga0311339_10013736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12496	Open in IMG/M
3300030007\|Ga0311338_10268387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1906	Open in IMG/M
3300030007\|Ga0311338_10410771	Not Available	1449	Open in IMG/M
3300030057\|Ga0302176_10308035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longispororuber	636	Open in IMG/M
3300030490\|Ga0302184_10145513	Not Available	1032	Open in IMG/M
3300030494\|Ga0310037_10287274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300030631\|Ga0210279_10264950	Not Available	644	Open in IMG/M
3300030741\|Ga0265459_10533901	Not Available	1046	Open in IMG/M
3300030743\|Ga0265461_11122241	Not Available	799	Open in IMG/M
3300031017\|Ga0265744_112461	Not Available	546	Open in IMG/M
3300031027\|Ga0302308_10681283	Not Available	585	Open in IMG/M
3300031234\|Ga0302325_10085972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5982	Open in IMG/M
3300031234\|Ga0302325_11637113	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031236\|Ga0302324_100741752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	1378	Open in IMG/M
3300031543\|Ga0318516_10635624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300031543\|Ga0318516_10681849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300031573\|Ga0310915_10426119	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300031681\|Ga0318572_10810932	Not Available	556	Open in IMG/M
3300031682\|Ga0318560_10649410	Not Available	571	Open in IMG/M
3300031708\|Ga0310686_107569688	Not Available	523	Open in IMG/M
3300031747\|Ga0318502_11000582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300031771\|Ga0318546_10175682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1454	Open in IMG/M
3300031778\|Ga0318498_10324391	Not Available	689	Open in IMG/M
3300031798\|Ga0318523_10366476	Not Available	717	Open in IMG/M
3300031805\|Ga0318497_10525057	Not Available	663	Open in IMG/M
3300031835\|Ga0318517_10193621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300031880\|Ga0318544_10268722	Not Available	661	Open in IMG/M
3300031890\|Ga0306925_10736688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1028	Open in IMG/M
3300031890\|Ga0306925_11844043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300031942\|Ga0310916_11487068	Not Available	553	Open in IMG/M
3300031945\|Ga0310913_11054452	Not Available	569	Open in IMG/M
3300031954\|Ga0306926_11045646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	969	Open in IMG/M
3300032010\|Ga0318569_10213547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	894	Open in IMG/M
3300032035\|Ga0310911_10812382	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032042\|Ga0318545_10337844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300032054\|Ga0318570_10369752	Not Available	653	Open in IMG/M
3300032064\|Ga0318510_10473125	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032076\|Ga0306924_11938299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300032089\|Ga0318525_10453432	Not Available	657	Open in IMG/M
3300032160\|Ga0311301_11053378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1066	Open in IMG/M
3300032261\|Ga0306920_101427930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	991	Open in IMG/M
3300032515\|Ga0348332_10443347	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300032783\|Ga0335079_10878538	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300032805\|Ga0335078_12234113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300032895\|Ga0335074_10609848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1086	Open in IMG/M
3300032895\|Ga0335074_10694610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	982	Open in IMG/M
3300032895\|Ga0335074_11010369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300032896\|Ga0335075_11073379	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300032898\|Ga0335072_10267831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1946	Open in IMG/M
3300032954\|Ga0335083_10282582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1467	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.47%
Aquatic	Environmental → Aquatic	14.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.07%
Freshwater	Environmental → Aquatic → Freshwater	11.97%
Peat	Environmental → Terrestrial → Peat	8.55%
Sediment	Environmental → Aquatic → Sediment	1.71%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.14%
Loam	Environmental → Terrestrial → Soil → Loam	12.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.13%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.71%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030631	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO086SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077623

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_4168660	2032320005	Soil	LQVYLDKTVPLLEYYAGREWMFAVDGARPADAVHEDIAGRIQRLAAFTTPT
Ga0062386_1017074952	3300004152	Bog Forest Soil	RTVPLLEYYAGREWMFTVDGAQPPDAVHEDIVERINKLAAFITR*
Ga0066395_105692841	3300004633	Tropical Forest Soil	VYMEKTVPLLEYYAGRELMFAVNGAQPPEAVHEEIVARLRKLAAFTAWDI*
Ga0070714_1006168311	3300005435	Agricultural Soil	RLQVYLEKTVPLLEYYAGREWMFTVDGARPADAVHEDIAGRIERLAAFTTPT*
Ga0070713_1009221872	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	IEHRLHVYQENTVPLLEYYAGREWMFAVDGSQPPQAVHEDIVSRLKKIAALAGQAW*
Ga0070707_1006184171	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TVPLLEYYAGREWMFTVDGAQPAEAVHSDIIGRLRRLAALAAEAW*
Ga0070763_100846042	3300005610	Soil	VIEHRLQVYLDKTVPLLEYYAGWEWMFTVDGAKPPDAVHAEILGRLQKLADFAPP*
Ga0070763_101325541	3300005610	Soil	YYANREWMFAVDGAQPPDAVHQEIVARLHRLSAFASEAG*
Ga0070763_102280981	3300005610	Soil	PLLDYYAGREWMFAVDGSQSPDGVHEEIVGRLKKLADFAGAW*
Ga0075014_1007207663	3300006174	Watersheds	VYLDKTVPLLEYYAGREWMFTVDGAQPPDTVHADILARLQKLADFAPGPRT*
Ga0075527_100948061	3300006640	Arctic Peat Soil	EKTVPLLAYYAGREWMSTVDGSRSADAVHDDIVRRIQRLAAFVTIAPA*
Ga0079221_102889241	3300006804	Agricultural Soil	YQENTVPLLEYYAGREQMFTVDGGRPVDAVHEDIVARIQKLASFTAST*
Ga0073928_103933491	3300006893	Iron-Sulfur Acid Spring	LLVYQENTVPLLEYYAGREWMFTVDGAQPPDVVHAEIVGRLQKLTAFTA*
Ga0116132_11573031	3300009646	Peatland	EYYAGREWMFVVDGAMPAEEVHADIVRRIQKLAAFAESAGF*
Ga0116215_12706702	3300009672	Peatlands Soil	FSDMTIPLLEYYAGREWMFVVDGAMPAEEVHADIVRRIQKLAAFAESAGS*
Ga0116224_103524003	3300009683	Peatlands Soil	LDKTVPLLEYYAGREWMFTVDGAQPPDAVHADILARLKKLADFVPPSQR*
Ga0116217_109778391	3300009700	Peatlands Soil	ENRLQVYLDKTVPLLEYYAGREWMFTVDGSQPPDAVHAGILARLQRLTDLAPGRLARICGT*
Ga0126373_114785072	3300010048	Tropical Forest Soil	AGREWMFAVDGTRSPDEVHEDIVDRLRKLAAFPL*
Ga0074045_105987841	3300010341	Bog Forest Soil	EWMFTVDGAQPPDAVHADILARLAKLADFVPPSHR*
Ga0126350_110498062	3300010880	Boreal Forest Soil	YLDNTVPLLEYYAGREWMFAVDGAQPPDAVHRDIVTRLNKLAAFALQTW*
Ga0164300_108592102	3300012951	Soil	PLLEYYAGREQMFTVDGARPADAVHEDIVARIQKLASFTAST*
Ga0181525_108719072	3300014654	Bog	TIPLLDYYAGREWMFTVDGTQSPDQVQQDIEERLRKLAAFDTSQGRNTGDD*
Ga0182038_103307721	3300016445	Soil	KTVPLLEYYAGREWMFTVDGAQPPGAVHEEIVARLQKLTVFAAWS
Ga0187806_11303452	3300017928	Freshwater Sediment	VPLLEYYAGREWMFTVDGAQPPDAVHADILARLKKLAELVP
Ga0187814_103034171	3300017932	Freshwater Sediment	EKTVPLLEYYAGREWMFTVDGTRLPDQVHQDIVGRLQKLAAFDTSEDSSITS
Ga0187879_105367651	3300017946	Peatland	PLLEYYAGREWMFTVDGAQPPDAVHAEILGRLQKLADFAPP
Ga0187783_109885132	3300017970	Tropical Peatland	LQVYLDKTVPLLEYYAGREWMFTVDGGQPPDAVHHDIVDGLHELADLAAWTRQGPPGR
Ga0187777_106511391	3300017974	Tropical Peatland	TVPLLAYYAGRELMFAVDGAQPPATVHEEIVARLRKLAAFTTWDI
Ga0187782_102309212	3300017975	Tropical Peatland	LDKTVPLLAYYADREWIFTVNGAQPPDAVHADIVAGLQDQADFAARTRQGPTAQ
Ga0187861_100466121	3300018020	Peatland	MTIPLLEYYAGREWMFVVDGAMPAEEVHADIVRRIQKLAAFAESAGS
Ga0187867_102089182	3300018033	Peatland	LEYYAGREWMFTVDGAQSPDAVHEDIVRRLRRLAAFTA
Ga0187883_101309271	3300018037	Peatland	RDKTVPLLEYYAGREWMFTVDGAQPPDAVHAEILGRLQKLADFAP
Ga0187855_105784432	3300018038	Peatland	DKTVPLLEYYAGREWMFTVDGSQPPDAVHAEILSRLQKLAAFGT
Ga0187887_107672641	3300018043	Peatland	VYQERTVPLLEYYAGREWMFTVDGAQSPDAVHEDIVRRLRRLAAFTA
Ga0210395_107534123	3300020582	Soil	EYYAGREWMFAVDGTQPPQDVHEDIVRRIRKLDTFSVPG
Ga0210401_110909581	3300020583	Soil	LLEYYAGREWMFTVNGDRPTDTVHEDIVGRIQKLSSFIAST
Ga0210401_114825372	3300020583	Soil	YYAGREWMFAVDGTRSPGQVHEDIVARLRKLAAFDIAQD
Ga0210400_111674671	3300021170	Soil	QTVPLLHYYAGREWLFTVDGSRPPDAVHEDIARRIQKLAALISGPT
Ga0210388_104142592	3300021181	Soil	YREKTIPLLEYYASREWMFAVDGTRPPSQVHEDIVTRLRKLAAFDIPD
Ga0210393_110935942	3300021401	Soil	YYAGREWMFAVDGTQPPPEVHEDIVRRIQKLKSFTAPG
Ga0210393_116770952	3300021401	Soil	TLPLLEYYAGREWMFTVNGDRPTDTVHEDIVGRIQKLSSFIAST
Ga0210385_114058571	3300021402	Soil	EYYAGREWMFTVDGAQPPDAVHAEILGRLKKLADFAPP
Ga0210387_101712541	3300021405	Soil	AGREWLFTVDGSRPPDAVHEDIARRIQKLAALISGPT
Ga0210383_117358132	3300021407	Soil	HRMQVYLDKTVPLLEYYAGREWMFTVDAAQPPDAVHEEIVVRLQKLAAFATWTRQGTVRP
Ga0210391_100884217	3300021433	Soil	ENRLKVYLDKTVPLLEYYAGREWMFTVDGAKPPDAVHADILARLQKLADLIP
Ga0210391_102017921	3300021433	Soil	PLLQYYAGREWMFVVDGARPPDAVHEDIARRIQKLADLIAGTT
Ga0210390_114179101	3300021474	Soil	VYLDETVPLLEYYANREWMFAVDGAQPPDAVHQEIVARLHKLSAFASEAG
Ga0210392_110548201	3300021475	Soil	TAPLLEYYAGREWMFTVDGAQPAEVVHSDIVGRLRRLAALAAEAW
Ga0213851_15542221	3300021860	Watersheds	IPLLEYYAGREWMFAVDGTRPPGQVHEDIVTRLRKLAAFDIPD
Ga0179589_102712881	3300024288	Vadose Zone Soil	NTVPLLEYYAGREWMFTVDGAQPPEAVHSDIVGRLRRLAALAAEAW
Ga0208820_10301311	3300025576	Peatland	GREWMFVVDGAMPAEEVHADIVRRIQKLAAFAESAGS
Ga0208586_10499422	3300025588	Arctic Peat Soil	RLQVFQENTLPLLEYYAGREWMFTVNGDRPTDTVHEDIVGRIQKLASFTT
Ga0207699_105146531	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PLLEYYAGREWMFTVDGARPADAVHEDIAGRIERLAAFTTPT
Ga0207684_108102051	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	REWMFTVDGAQPAEAVHSDIIGRLRRLAALAAEAW
Ga0207693_102207992	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	HRLQVYLEKTVPLLEYYAGREWMFTVDGARPADAVHEDIAGRIERLAAFTTPT
Ga0207693_105151212	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	HRLQVYLEKTVPLLEYYAGREWMFTVDGARPAVAVHEDIAGRIERLAAFTTPTR
Ga0207646_111960021	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TVPLLEYYAGREWMFTVDGAQPAEAVHSDIIGRLRRLAALAAEAW
Ga0207700_103093442	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PLLEYYAGREWMFTVDGARPAVAVHEDIAGRIERLAAFTTPT
Ga0207700_117699841	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LEYYAGREWMFTVDGAKPPKEVHSDIVGRLRRLAALAAEAW
Ga0207664_115431401	3300025929	Agricultural Soil	PLLEYYAGREWMFTVDGARSADAVHEDIVTRIQKLASFTAST
Ga0209871_10404682	3300026217	Permafrost Soil	VPLLEYYAGREWMFTVDGARPAEVVHEDIVQRIQKLATFTAPN
Ga0179587_103916491	3300026557	Vadose Zone Soil	YAGREWMFTVDGAQPPEVVHSDIVGRLRRLAALAAEAW
Ga0209772_100340921	3300027768	Bog Forest Soil	YLDKTVPLLEYYAGREWMFTVDGAKPPDAVHAEILGRLQKLADFAPP
Ga0209166_100241147	3300027857	Surface Soil	YAGREWMFSVDGTRPPQAVHEDIVTRIQKLADLAASL
Ga0209067_106441091	3300027898	Watersheds	RLQVYLDKTVPLLEYYAGREWMFTVDGAQPPDAVHADILARLKKLADLAR
Ga0209415_110874861	3300027905	Peatlands Soil	AVVEHRLQVYLDNTVPLLEYYAGREWMFTVDGGRPADAVHEDIVTRIQKLASFSAST
Ga0311371_107270192	3300029951	Palsa	QEMTIPLLDYYANREWMFAVDGTQPAQAVHEDIVGRLKKLADLADATR
Ga0311339_100137361	3300029999	Palsa	EHRLQVYREMTVPLLEYYAGREWMFVVDGALPAEAVHADIVRRIERLAAFSS
Ga0311338_102683874	3300030007	Palsa	VPLLEYYAGREWMFVVDGALPAEAVHADIVRRIERLAAFSS
Ga0311338_104107713	3300030007	Palsa	QVYLDKTVPLLEYYAGREWMFTVDGAQPPDAVHAEILGRLRKLADFAP
Ga0302176_103080352	3300030057	Palsa	LDKTVPLLEYYAGREWMFTVDGAQSPDAVHAEILGRLQKLADFAPP
Ga0302184_101455132	3300030490	Palsa	NREWMFAVDGTQPAQAVHEDIVGRLKKLADLADATR
Ga0310037_102872742	3300030494	Peatlands Soil	VPLLKYYAGREWMSTVNGARPADAVHEDIVSRIQKLAAFAGSA
Ga0210279_102649501	3300030631	Soil	LLEYYAGREWMFTVDGSQPPDAVHAEILSRLKKLADFALL
Ga0265459_105339011	3300030741	Soil	QVYQEKTVPLLEYYAGREWMFAVDGTQPAAAVHEDIVTRLKKLAAFTPWS
Ga0265461_111222411	3300030743	Soil	VYLDKTVPLLEYYAGREWMFTVDGSQPPDAVHAEILSRLKKLADFALL
Ga0265744_1124611	3300031017	Soil	YAGREWMFTVDGAKPPDAVHADILARLQKLADLTP
Ga0302308_106812832	3300031027	Palsa	HRQQVYQEKTIPLLDYYANREWMFAVDGTQPAQAVHEDIVGRLKKLADLADATR
Ga0302325_100859726	3300031234	Palsa	RLQVYLDKTVPLLEYYAGREWMFTVDGAQPPDAVHAEILGRLQKLADFAPP
Ga0302325_116371133	3300031234	Palsa	RLQVYLDKTVPLLEYYAGREWMFTVDGAQPPDAVHAEILGRLRKLADFAP
Ga0302324_1007417521	3300031236	Palsa	LDKTVPLLEYYAGREWMFTVDGAQPPDAVHAEILGRLKKLADFAAP
Ga0318516_106356241	3300031543	Soil	AKTVPLLAYYAGRELMFAVDGAQPPDAVHEEIVARLLKLAAFAAWDI
Ga0318516_106818492	3300031543	Soil	YYAGRELIFAVDGAQPPDAVHEEIVARLRKLAAFTTCGI
Ga0310915_104261192	3300031573	Soil	DKTVPLLEYYADREWMFTVDGAQSPDVVHEDIVAGLRKMTEFAT
Ga0318572_108109321	3300031681	Soil	HAGREWMFTVDGAQPPGAVHEEIVARLQKLTVFAAWS
Ga0318560_106494101	3300031682	Soil	HVYRGKTVPLLEYYAGREWMFTVDGAQPRDAVHEEIVARLQKLTVFAAWS
Ga0310686_1075696881	3300031708	Soil	TVPLLEYYADRERMFTVDGAQSPDAVQADIVAGLQKLADFAAWTTLGSWC
Ga0318502_110005821	3300031747	Soil	VYREKTVPLLEYHAGREWMFTVDGAQPPGAVHEEIVAHLQKLTVFAAWS
Ga0318546_101756821	3300031771	Soil	LHVYRGKTVPLLEYYAGREWMFTVDGAQPRDAVHEEIVARLQKLTVFAAWS
Ga0318498_103243911	3300031778	Soil	LHVYRGKTVPLLEYYAGREWMFTVDGAQPRGAVHEEIVARLQKLTVFAAWS
Ga0318523_103664761	3300031798	Soil	AAVTENRLHVYREKTVPLLEYHAGREWMFTVDGAQPPGAVHEEIVARLQKLTVFAAWS
Ga0318497_105250571	3300031805	Soil	PLLEYYAGREWMFTVDGAQPRGAVHEEIVARLQKLTVFAAWS
Ga0318517_101936211	3300031835	Soil	DKTVPLLEYYADREWIFTVDGAQPPDAVHGDIVAGLQDQADIAARTRQGLPRQ
Ga0318544_102687222	3300031880	Soil	HVYRGKTVPLLEYYAGREWMFTVDGAQPRGAVHEEIVARLQKLTVFAAWS
Ga0306925_107366881	3300031890	Soil	VYRGKTVPLLEYYAGREWMFTVDGAQPRDAVHEEIVARLQKLTVFAAWS
Ga0306925_118440431	3300031890	Soil	KTIPLLEYYAGREWMFAVDGTRSPDQVHQDIVTRLRKLAAFNTSEGRAESA
Ga0310916_114870681	3300031942	Soil	LEVYLEKTVPLLAYYAGRELIFAVDGAQPPDAVHEEIVARLQKLTVFAAWS
Ga0310913_110544522	3300031945	Soil	REPLARVPGKTVPLLEYYAGREWMFTVDGAQPPGAVHEEIVARLQKLTVFAAWS
Ga0306926_110456461	3300031954	Soil	VPLLEYYAGREWMFTVDGAQPPGAVHEEIVARLQKLTVFAAWS
Ga0318569_102135471	3300032010	Soil	VPLLEYYAGREWMFTVDGAQPRDAVHEEIVARLQKLTVFAAWS
Ga0310911_108123821	3300032035	Soil	VPLLEYYADREWMFTVDGAQSPDVVHEDIVAGLRKMTEFAT
Ga0318545_103378441	3300032042	Soil	VPLLAYYAGRELIFAVDGAQPPDAVHEEIVARLRKLAAFTTWDI
Ga0318570_103697521	3300032054	Soil	NRLHVYREKTVPLLEYHAGREWMFTVDGAQPPGAVHEEIVAHLQKLTVFAAWS
Ga0318510_104731251	3300032064	Soil	YLDKTVPLLEYYADREWMFTVDGAQSPDVVHEDIVAGLRKMTEFAT
Ga0306924_119382992	3300032076	Soil	YRDKTIPLLEYYAGREWMFAVDGTRSPDQVHQDIVTRLRKLAAFNTSEGRAESA
Ga0318525_104534321	3300032089	Soil	RLYVYRGKTVPLLEYYAGREWMFTVDGAQPPGAVHEEIVARLQKLTVFAAWS
Ga0311301_110533781	3300032160	Peatlands Soil	TVPLLEYYAGREWMFTVDGAQPPDVVHADILARLKKLADLAR
Ga0306920_1014279302	3300032261	Soil	YAGRELMFAVDGAQPPDAVHEEIVARLLKLAAFAAWDI
Ga0348332_104433471	3300032515	Plant Litter	VIERRLQVYLDMTVPLLEYYADREWMFAVDGTQAPYAVHEDIVAGLKRLALPG
Ga0335079_108785381	3300032783	Soil	LLEYYAGREWMFAVDGTRSPGQVHEDIVARLRKMAAFDISQD
Ga0335078_122341132	3300032805	Soil	YYAGREWMFAVDGAQPSQAVHEDIVARLKRISALAEQAW
Ga0335074_106098481	3300032895	Soil	TVPLLAYYAGREWMFTVDGAQPPDAVHADIVAGLQNRPAFEGWRADPVA
Ga0335074_106946101	3300032895	Soil	VYLDETVPLLEYYANREWMFAVDGAQPPDAVHQEIVARLHKLSAFASEAS
Ga0335074_110103692	3300032895	Soil	VPLLEYYAGREWMFAVDGTQAPGAVHEDIVAGLKRLALPG
Ga0335075_110733792	3300032896	Soil	PLLEYYAGREWMFAVDGTRSPDEVHEDIVDRLRKLATFSI
Ga0335072_102678313	3300032898	Soil	NREWMFAVDGAQPPDAVHQEIVARLHKLSAFASEAS
Ga0335083_102825821	3300032954	Soil	LEYYAGREWMFAVDGSQPPDAVHQEIVSRLHKLSAFASEAS

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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