NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F077619

Metagenome / Metatranscriptome Family F077619

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077619
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 47 residues
Representative Sequence MPDLGNSRRKLKIAIGAMLAADVIAVAVLFSPLVGSADSRRL
Number of Associated Samples 108
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 94.87 %
% of genes from short scaffolds (< 2000 bps) 87.18 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.436 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(7.692 % of family members)
Environment Ontology (ENVO) Unclassified
(35.897 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.556 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 44.29%    β-sheet: 0.00%    Coil/Unstructured: 55.71%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF05137PilN 10.26
PF05157T2SSE_N 1.71
PF00437T2SSE 1.71
PF15919HicB_lk_antitox 1.71
PF14559TPR_19 0.85
PF03548LolA 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG3166Type IV pilus assembly protein PilNCell motility [N] 20.51
COG2834Outer membrane lipoprotein-sorting proteinCell wall/membrane/envelope biogenesis [M] 0.85


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.44 %
UnclassifiedrootN/A2.56 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10266167All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300001593|JGI12635J15846_10691131All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300001661|JGI12053J15887_10031777All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2968Open in IMG/M
3300004080|Ga0062385_10015742All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2717Open in IMG/M
3300004080|Ga0062385_10369547All Organisms → cellular organisms → Bacteria → Acidobacteria847Open in IMG/M
3300004082|Ga0062384_100002730All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter5637Open in IMG/M
3300004091|Ga0062387_101238868All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300004092|Ga0062389_102836914All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300004635|Ga0062388_100532579All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1060Open in IMG/M
3300005332|Ga0066388_101020318All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1389Open in IMG/M
3300005561|Ga0066699_10459708All Organisms → cellular organisms → Bacteria → Acidobacteria911Open in IMG/M
3300005602|Ga0070762_10193315All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1241Open in IMG/M
3300005602|Ga0070762_10746927All Organisms → cellular organisms → Bacteria → Acidobacteria659Open in IMG/M
3300006059|Ga0075017_100040077All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3115Open in IMG/M
3300006059|Ga0075017_100232742All Organisms → cellular organisms → Bacteria → Acidobacteria1342Open in IMG/M
3300006174|Ga0075014_100852525All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300006797|Ga0066659_10822956All Organisms → cellular organisms → Bacteria → Acidobacteria770Open in IMG/M
3300009520|Ga0116214_1007103All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3998Open in IMG/M
3300009524|Ga0116225_1069916All Organisms → cellular organisms → Bacteria → Acidobacteria1656Open in IMG/M
3300009631|Ga0116115_1057717All Organisms → cellular organisms → Bacteria → Acidobacteria1023Open in IMG/M
3300009634|Ga0116124_1180243All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300009636|Ga0116112_1115968All Organisms → cellular organisms → Bacteria → Acidobacteria751Open in IMG/M
3300009641|Ga0116120_1152651All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300009698|Ga0116216_10136344All Organisms → cellular organisms → Bacteria → Acidobacteria1509Open in IMG/M
3300009762|Ga0116130_1171941All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300009839|Ga0116223_10174904All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1323Open in IMG/M
3300011110|Ga0138578_1031237All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300011270|Ga0137391_11328172All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium566Open in IMG/M
3300012205|Ga0137362_10869548All Organisms → cellular organisms → Bacteria → Acidobacteria771Open in IMG/M
3300012363|Ga0137390_11544596All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300012918|Ga0137396_10886090All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300012971|Ga0126369_11775283All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300014155|Ga0181524_10457009All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium548Open in IMG/M
3300014159|Ga0181530_10047812All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2830Open in IMG/M
3300014164|Ga0181532_10248588All Organisms → cellular organisms → Bacteria → Acidobacteria1023Open in IMG/M
3300014169|Ga0181531_10770026All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300014199|Ga0181535_10855682All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium514Open in IMG/M
3300014200|Ga0181526_10706727All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300014492|Ga0182013_10133956All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1594Open in IMG/M
3300014638|Ga0181536_10429054All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium586Open in IMG/M
3300016702|Ga0181511_1064412All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300016702|Ga0181511_1224149All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300017823|Ga0187818_10124360All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1119Open in IMG/M
3300017934|Ga0187803_10379558All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300017935|Ga0187848_10328987All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300017972|Ga0187781_10189136All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1451Open in IMG/M
3300017975|Ga0187782_10942260All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300017988|Ga0181520_10382568All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1026Open in IMG/M
3300018001|Ga0187815_10454298All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300018012|Ga0187810_10025095All Organisms → cellular organisms → Bacteria → Acidobacteria2163Open in IMG/M
3300018019|Ga0187874_10134886All Organisms → cellular organisms → Bacteria → Acidobacteria1053Open in IMG/M
3300018021|Ga0187882_1421227All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300018030|Ga0187869_10110428All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1383Open in IMG/M
3300018043|Ga0187887_10959353Not Available506Open in IMG/M
3300018046|Ga0187851_10623505All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300018062|Ga0187784_10182063All Organisms → cellular organisms → Bacteria → Acidobacteria1717Open in IMG/M
3300018085|Ga0187772_10527598All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300018090|Ga0187770_10723777All Organisms → cellular organisms → Bacteria → Acidobacteria794Open in IMG/M
3300018090|Ga0187770_10962147All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300018468|Ga0066662_10353687All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1265Open in IMG/M
3300019275|Ga0187798_1212768All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1248Open in IMG/M
3300019787|Ga0182031_1340646All Organisms → cellular organisms → Bacteria → Acidobacteria2067Open in IMG/M
3300019787|Ga0182031_1445377All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4789Open in IMG/M
3300019787|Ga0182031_1518277All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1804Open in IMG/M
3300020581|Ga0210399_10009817All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7479Open in IMG/M
3300021407|Ga0210383_11524305All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300021432|Ga0210384_10329704All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1374Open in IMG/M
3300021477|Ga0210398_10486393All Organisms → cellular organisms → Bacteria → Acidobacteria1005Open in IMG/M
3300021479|Ga0210410_11753870All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium515Open in IMG/M
3300022881|Ga0224545_1023439All Organisms → cellular organisms → Bacteria → Acidobacteria887Open in IMG/M
3300023101|Ga0224557_1214197All Organisms → cellular organisms → Bacteria → Acidobacteria660Open in IMG/M
3300025419|Ga0208036_1046486All Organisms → cellular organisms → Bacteria → Acidobacteria752Open in IMG/M
3300025472|Ga0208692_1091948All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium613Open in IMG/M
3300025507|Ga0208188_1078625All Organisms → cellular organisms → Bacteria → Acidobacteria771Open in IMG/M
3300026514|Ga0257168_1017552All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1447Open in IMG/M
3300027110|Ga0208488_1042967All Organisms → cellular organisms → Bacteria → Acidobacteria800Open in IMG/M
3300027562|Ga0209735_1012381All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1670Open in IMG/M
3300027575|Ga0209525_1129542All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium586Open in IMG/M
3300027645|Ga0209117_1045436All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1317Open in IMG/M
3300027737|Ga0209038_10220855All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300027738|Ga0208989_10268665All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300027767|Ga0209655_10249019All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300027825|Ga0209039_10272775All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300027875|Ga0209283_10480046All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300027884|Ga0209275_10143360All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1261Open in IMG/M
3300027884|Ga0209275_10731029All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300027908|Ga0209006_10817055All Organisms → cellular organisms → Bacteria → Acidobacteria754Open in IMG/M
3300027908|Ga0209006_11182703All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium599Open in IMG/M
3300027911|Ga0209698_10133838All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2044Open in IMG/M
3300028552|Ga0302149_1121168All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300028560|Ga0302144_10151305All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300028565|Ga0302145_10197755All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300028746|Ga0302233_10041670All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1909Open in IMG/M
3300028759|Ga0302224_10044294All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1656Open in IMG/M
3300028772|Ga0302209_10237503All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300028775|Ga0302231_10410339All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300029817|Ga0247275_1084240All Organisms → cellular organisms → Bacteria → Acidobacteria857Open in IMG/M
3300029914|Ga0311359_10769903All Organisms → cellular organisms → Bacteria → Acidobacteria679Open in IMG/M
3300029916|Ga0302148_1240884All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300029919|Ga0302141_1045129All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1201Open in IMG/M
3300029944|Ga0311352_11190198All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300029954|Ga0311331_10197350All Organisms → cellular organisms → Bacteria2305Open in IMG/M
3300030020|Ga0311344_10242442All Organisms → cellular organisms → Bacteria → Acidobacteria1797Open in IMG/M
3300030057|Ga0302176_10333644All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300030737|Ga0302310_10267709All Organisms → cellular organisms → Bacteria → Acidobacteria972Open in IMG/M
3300030991|Ga0073994_10784776All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300031057|Ga0170834_102209549All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium555Open in IMG/M
3300031242|Ga0265329_10075466All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1067Open in IMG/M
3300031708|Ga0310686_112859163All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1294Open in IMG/M
3300031726|Ga0302321_102644422All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300031740|Ga0307468_101990246All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300031902|Ga0302322_102500091All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium636Open in IMG/M
3300032783|Ga0335079_10026068All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6699Open in IMG/M
3300033158|Ga0335077_11501017All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300033982|Ga0371487_0244838All Organisms → cellular organisms → Bacteria → Acidobacteria832Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil7.69%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.69%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland6.84%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog6.84%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland6.84%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog6.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.98%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.13%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.13%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.13%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.27%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.42%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.42%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog3.42%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.56%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.56%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.71%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.85%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.85%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300009634Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150EnvironmentalOpen in IMG/M
3300009636Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150EnvironmentalOpen in IMG/M
3300009641Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300011110Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300016702Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019275Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022881Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24EnvironmentalOpen in IMG/M
3300023101Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14EnvironmentalOpen in IMG/M
3300025419Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025472Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300027110Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028552Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1EnvironmentalOpen in IMG/M
3300028560Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2EnvironmentalOpen in IMG/M
3300028565Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3EnvironmentalOpen in IMG/M
3300028746Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028772Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_1EnvironmentalOpen in IMG/M
3300028775Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2EnvironmentalOpen in IMG/M
3300029817Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25EnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029916Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1EnvironmentalOpen in IMG/M
3300029919Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2EnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030020II_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031242Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaGHost-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033982Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10124367613300000955SoilMPDLSDARQKVKIAISALVAIDVIAVAVLLSPLVGSTESRK
JGI12269J14319_1026616723300001356Peatlands SoilMPDLRNSRRKLKIAIGAMLAVDVLAAAVLFSPLVGS
JGI12635J15846_1069113123300001593Forest SoilMPDFGNSRRKLKIAIGVMLAADVVAVAVLFSPLVGSADSRQLQLNQLR
JGI12053J15887_1003177713300001661Forest SoilMPDFGNSRRKLKIAIGVMLAADVVAAAVLFSPLVGS
Ga0062385_1001574213300004080Bog Forest SoilMPDLGNSRRKLKIAIGAMLAVDVIAIGVLLSPLVGSEDSR
Ga0062385_1036954723300004080Bog Forest SoilMPDFANSRRKLKIAIGAMVAVDVIAVGILFSPLVGSSESRTLQLNLLRVELQKKTKEVE
Ga0062384_10000273063300004082Bog Forest SoilMPDLGHSRRKMKIAIGAMVAVDVIAMAILLSPLVGSSESRRTQILELRAELTKKNKAVEP
Ga0062387_10123886823300004091Bog Forest SoilMPDLRNSRRKLKIAIGAMLAVDVVAVAVLFSPLVGSADSRQLQLNLLRVELT
Ga0062389_10283691423300004092Bog Forest SoilMPDFANSRRKLKIAIGAMLAADVVAVAVLFSPLVGSENSRRLQIGELSAE
Ga0062388_10053257933300004635Bog Forest SoilMPDLGNSRRKLKIAIGAMIAADVIAVGVLFSPLVGSADSR
Ga0066388_10102031813300005332Tropical Forest SoilMADLRKTRRNLKIAMAALIALDVAAVAVLFSPLVGSAQSRRFEKNSLAAELTKK
Ga0066699_1045970813300005561SoilMPDFGNSRRKLKIAIGVMLAADVVAAAVLFSPLVGSADSRQLQ
Ga0070762_1019331533300005602SoilMPDLGNSRRKLKIAIGAMLAADVIAVAVLFSPLVGS
Ga0070762_1074692713300005602SoilMPDLGKSRRKLKIAIGAMLVADIVAAGVLFSPLVGS
Ga0075017_10004007713300006059WatershedsMPDLGNSRRKLKIAIGAMLAADVVAMAVLFSPLVGSADSRQLQLNLL
Ga0075017_10023274213300006059WatershedsMPDLRNSRRKLKIAIGAMLAVDVIAGGVLFSPLVGSADSRQLQLVQLK
Ga0075014_10085252523300006174WatershedsMADLQHSRRTLKIAIAVMVAVDVLAAAVLLSPLVGSAQSRRLQM
Ga0066659_1082295613300006797SoilMPDFGNSRRKLKVAIGVMLAADVVALAVLFSPLVGSADSRQLQLNQLRVELYKKTRQVEP
Ga0116214_100710353300009520Peatlands SoilMPDFRNSRRKLKIAIGAMVAVDVVAVAVLFSPLVGSPESRRVQIYELKAEL
Ga0116225_106991633300009524Peatlands SoilMPDLRKSRRKLKFAIAAMLAADVIAVAVLFSPLVGSVDSRRLQI
Ga0116115_105771733300009631PeatlandMPDFRKSRRKLKIAIGAMLVADVVAVAVLFSPLVGSADSR
Ga0116124_118024313300009634PeatlandMPDLGNSRRKLKIAIGAMLAADIVAVAVLFSPLVG
Ga0116112_111596823300009636PeatlandMPDLGNSRRKLKIAIGAMLAADVVAVAVLFSPLVGSE
Ga0116120_115265133300009641PeatlandMPDLGNSRRKLKIAIGAMLAADVVAVAVLFSPLVGSEDSRRLQ
Ga0116216_1013634433300009698Peatlands SoilMPDLRKSRRKLKFAIAAMLAADVIAVAVLFSPLVGSVDSRRLQIL
Ga0116130_117194123300009762PeatlandMPDLRKSRRKLKFAIGAMLAADAIAVAVLFSPLVGSVDSRRL
Ga0116223_1017490433300009839Peatlands SoilMPDLRNSRRKLKVAIGVMLAADIVAAAVLFSPLVGSADSRRLQI
Ga0138578_103123723300011110Peatlands SoilMPDLRKSRRKLKIAIGAMLAADVIAVAVLLSPLVGSADSRKLQIYELKAEL
Ga0137391_1132817223300011270Vadose Zone SoilMPDFANSRRKLKIAIGVMLAADVVAVAVLFSPLVGSADSRQL
Ga0137362_1086954823300012205Vadose Zone SoilMPDFGNSRRKLKIAIGVMLAVDVVAAAVLFSPLVGSADSRQLQLNQLRVELYKKTRQVEP
Ga0137390_1154459623300012363Vadose Zone SoilMPDLGNSRRKLKIAIGAMIVADVIAVGVLFSPLVGSADSRQLQLNLLRAELIRKTREVEP
Ga0137396_1088609013300012918Vadose Zone SoilMPDFGNSRRKLKIAIGVMLAADVVAAAVLFSPLVG
Ga0126369_1177528323300012971Tropical Forest SoilMPELQDSRRKLKIAIVVMVVADVIAASVLFSPLVGS
Ga0181524_1045700923300014155BogMPDLGNSRRKLKIAMGAMLAADVVAVAVLFSPLVGSVDSRKLQLNQLRVELQ
Ga0181530_1004781253300014159BogMPDLRKSRRKLKFAIGAMLAADAIAVALLFSPLVGSVDSRRLQIYEL
Ga0181532_1024858813300014164BogMPDLGNSRRKLKIAIGAMLAADVVAVAVLFSPLVGS
Ga0181531_1077002613300014169BogMPDLGKSRRKLKIAIGAMLVADVVAAGVLFSPLVGSAD
Ga0181535_1085568223300014199BogMPDLRNSRRNLKIAIGAMLAADVVAVAVLFSPLVG
Ga0181526_1070672723300014200BogMPDLRDSRRKLKIAMGVMLAADVVAVAVLFSPLVGSADSRRLQINELRAELTK
Ga0182013_1013395613300014492BogMPDLGNSRRKLKIAMGAMLVADVMAVAVLFSPLVGSAGSRKLQL
Ga0181536_1042905423300014638BogMPDLGNSRRKLKIAMGAMLAADVIAAAVLFSPLVGSAGSRKLQLS
Ga0181511_106441223300016702PeatlandMPDLRNSRRNLKIAIGAMLAADVVAVAVLFSPLVGSAESRRLQINQLRVELQRKTNEV
Ga0181511_122414923300016702PeatlandMPDLGKSRRKLKFAIGAMLAADVIAVAVLFSPLVGSVESRRLQILELRAELTKK
Ga0187818_1012436033300017823Freshwater SedimentMPDLGRSRRKLKIAIGVMLAADAIAVAVLFSPLVGSVESRRLQILELKAELT
Ga0187803_1037955823300017934Freshwater SedimentMPDLGNSRRKLKIAIAAMLAADVVAMAVLFSPLVGSAGSRRQ
Ga0187848_1032898713300017935PeatlandMPDFRASRRNLKIAIGAMLAADVIAAAVLFSPLVGSADGRKLQINELKAE
Ga0187781_1018913613300017972Tropical PeatlandMPDLRNTRRKLKIAIGTMLAVDVVALGVLFSPLVGSAHSRNAEL
Ga0187782_1094226023300017975Tropical PeatlandMPDLRNTRRKLKIAIGTMLAVDVVALGVLFSPLVGSA
Ga0181520_1038256813300017988BogMPDLRSTRSKLKIAIAAMVVADIVAVGVYFSPLVG
Ga0187815_1045429823300018001Freshwater SedimentMPDLGKSRRKLKIAIGAMLVADAIAVAVLFSPLVGSVDSRRLQIYELRAGLTK
Ga0187810_1002509543300018012Freshwater SedimentMPDFGNSRRKLKIAIGAMLAVDVVAVAVLFSPLVGSADSRRLQLNQLAVELRKKTR
Ga0187874_1013488613300018019PeatlandMPDFRKSRRNLKIAIGAMLAADVVAAAVLFSPLVGSAESRRLQIYE
Ga0187882_142122713300018021PeatlandMPDLGKSRRKLKFAIGAMLAADVIAVAVLFSPLVGS
Ga0187869_1011042833300018030PeatlandMPDFQKSRRKLKIAIGAMLAVDVVAAAVLFSPLVGSPDSRRMQIYAQKAELTKK
Ga0187887_1095935313300018043PeatlandMPELGNSRRRLKVAIGAMLAADVVAVAVLFSPLVG
Ga0187851_1062350523300018046PeatlandMPDLQNTRRQLKVVIGAMVVADVIAIGVLFSPLVGSADSRRAEMRQLSVE
Ga0187784_1018206323300018062Tropical PeatlandMPDLGNTRRKLKVALAAMVVADVIALGVLFSPLVGSAASRQIQLNQLFA
Ga0187772_1052759813300018085Tropical PeatlandMPDLGKSRRKLKIAIGVMLAADAIAAAVLFSPLVGSVESRRLQIYELRAELTKK
Ga0187770_1072377713300018090Tropical PeatlandMPDLGNTRRKLKIAIAAMVVADALAAGVLFSPLVGSAESRRIQLS
Ga0187770_1096214713300018090Tropical PeatlandMPDLGNTRRKLRIAIVAMVAADVLAAGVLFSPLVGSAESRRMQLNQLS
Ga0066662_1035368733300018468Grasslands SoilMPDLRDARRKLKIAFIALGAVDIVAAAVLFSPLVGSQ
Ga0187798_121276833300019275PeatlandMPDLGNTRRKLKIALAAMVVADALAAAVLFSPLVGSAESRRI
Ga0182031_134064643300019787BogMPDLGNSRRKLKIAIGAMLAADIVAVAVLFSPLVGSADSRRTQILNLRPNLQKKPTRWRR
Ga0182031_144537773300019787BogMPDLGNSRRKLKIAIGAMLAADIVAVAVLFSPLVGSADSRRTQILELKAELTKKPTRWRR
Ga0182031_151827723300019787BogLKIAIGAMLAADIVAVAVLFSPLVGSADSRRTQILELKAELTKKPTRWRR
Ga0210399_1000981713300020581SoilMPDFRNSRRKLKIAIGVMLAADVVAAAVLFSPLVG
Ga0210383_1152430523300021407SoilMPDLGNSRRKLKIAIGAMLAVDVIAIGVLLSPLVGS
Ga0210384_1032970413300021432SoilMPDFANSRRKLKIAIGVMLAADVVAVAVLSSPLVGSA
Ga0210398_1048639313300021477SoilMPDLGNSRRKLKIAIGAMLAADVIAVAVLFSPLVGSADSRRLQISELKAE
Ga0210410_1175387013300021479SoilMPDFGNSRRKLKIAIGVMLAADVVAVAVLFSPLVGSADSRQLQLNQL
Ga0224545_102343913300022881SoilMPDLGNSRRKLKIAIGAMLAVDVIAAAVLFSPLVGSADSRRLQINELKAE
Ga0224557_121419723300023101SoilMPDFANSRRKLKVAIGTMLAVDVVAVAVLFSPLVGSASSRRLQINELRAELTKRTREVEP
Ga0208036_104648613300025419PeatlandMPDLGNSRRKLKIAIGAMLVADVVAVAVLFSPLVGSADSRQMQ
Ga0208692_109194823300025472PeatlandMPDFRKSRRKLKIAIGAMLAADVVAAAVLFSPLVGSADSRQFQINELKAERT
Ga0208188_107862513300025507PeatlandMPDLGKSRRKLKIAIAAMLAADVVAVAVLFSPLVGSADSRKLQIYELKAEL
Ga0207693_1034981933300025915Corn, Switchgrass And Miscanthus RhizosphereMPDLSDARQKVKIAISALVAIDVIAVAVLLSPLVGSTES
Ga0257168_101755233300026514SoilMPDFANSRRKLKIAIGVMLAADVVAAAVLFSPLVGSADSRQLQLNQLRVELYK
Ga0208488_104296713300027110Forest SoilMPELGNSRRKLKIAIGVMLAIDVVAMAVLFSPLVGSADSRQLQLSELRVE
Ga0209735_101238113300027562Forest SoilMPDFGNSRRKLKIAIGVMLAADVVAVAVLFSPLVGSADSRQLQLN
Ga0209525_112954213300027575Forest SoilMPDLTSSRRKLKIAIGAMLAADVIAAAVLFSPLVGSADSRRQ
Ga0209117_104543633300027645Forest SoilMPDFGNSRRKLKIAIGAMLAADVVAAAVLFSPLVGSADSRQLQLNQLRVELHKKTRE
Ga0209038_1022085513300027737Bog Forest SoilMPDLGNSRRKLKIAIGAMIAADVIAVGVLFSPLVGSADSRQL
Ga0208989_1026866513300027738Forest SoilMPDLGSSRRKLKIAIAAMVAADVIAIAVLFSPLVGSADSRHLQL
Ga0209655_1024901913300027767Bog Forest SoilMPDLGNSRRKLKIAIGAMLAVDVIAIGVLLSPLVGSEDSRRIELSQLRVELQRKTRD
Ga0209039_1027277513300027825Bog Forest SoilMPDLGNSRRKLKIAIGAMLAADLVAVAVLFSPLVGSADSRQLQLNQLRVELQKKN
Ga0209283_1048004613300027875Vadose Zone SoilMPDLGNSRRKLKIAIGAMLAADVVAMAVLFSPLVGSADSRQLQLNLLRVELTKKNREVEP
Ga0209275_1014336033300027884SoilMPDLGNSRRKLKIAIGAMLAADVIAVAVLFSPLVGSADSRRL
Ga0209275_1073102913300027884SoilMPDLGKSRRKLKIAIGAMLVADIVAAGVLFSPLVGSADSRRTQ
Ga0209006_1081705513300027908Forest SoilMPDLGNSRRKLKIAIGAMLAVDVIAAAVLFSPLVGSVDSRKAQLGQLHFELQKKTH
Ga0209006_1118270313300027908Forest SoilMPDLTSSRRKLKIAIGAMLAADVIAAAVLFSPLVGSADSRRQQLNLMRVELTKKNHE
Ga0209698_1013383843300027911WatershedsMPDFSQSRRKLKIAIGAMLAADVVAAGLLFSPLVGSADSRQMQLNLLRVDL
Ga0302149_112116813300028552BogMPDFQNSRRKLKIAIGAMLAADVIAVGVLFSPLVGSEDSRR
Ga0302144_1015130513300028560BogMPDFQNSRRKLKIAIGAMLAADVIAVGVLFSPLVGSEDS
Ga0302145_1019775513300028565BogMPDFQNSRRKLKIAIGAMLAADVIAVGVLFSPLVGSEDSRRTELSQLRIELQKKT
Ga0302233_1004167013300028746PalsaMPDLGKSRRKLKIAIGAMLVADVVAAGVLFSPLVGSADSRRT
Ga0302224_1004429433300028759PalsaMPDLGKSRRKLKIAIGAMLVADVVAAGVLFSPLVGSADSRRTQI
Ga0302209_1023750323300028772FenMPELQGSRHKLKIAIAAMVAADLVAAAILFSPLVGSADSRRQL
Ga0302231_1041033923300028775PalsaMPDLRDSRRKLKIAIGAMLAADVIAVAVLFSPLVGSADSRRQQLNLLRAELTKKNH
Ga0247275_108424023300029817SoilMPDLRKSRRKLKIAIGAMLAVDVIAAGVLFSPLVGSEESRNQQLNQLKIELLKKS
Ga0311359_1076990323300029914BogMPELGNSRRRLKVAIGAMLAADVVAVAVLFSPLVGSEDSRRLQINELRAELTKKTR
Ga0302148_124088413300029916BogMPDFQKSRRKLKIAIGAMVAADVIAVAVLFSPLVGSE
Ga0302141_104512933300029919BogMPDFQNSRRKLKIAIGAMLAADVIAVGVLFSPLVGSEDSRRTELSQLRI
Ga0311352_1119019813300029944PalsaMPDLGNSRRKLKIVIGTMLAVDVIAAAVLFSPLVGSADSRQLQLNLLR
Ga0311331_1019735013300029954BogMPDFQKSRRKLKIAIGAMVAADVIAVAVLFSPLVGSEDSRRLQLSQLRVELQKKT
Ga0311344_1024244213300030020BogMPDFQKSRRKLKIAIGAMVAADVIAVAVLFSPLVGSEDSRRLQ
Ga0302176_1033364413300030057PalsaMPDLGKSRRKLKIAIGAMLVADVVAAGVLFSPLVGSADSRRTQITELRVELVKKTRE
Ga0302310_1026770933300030737PalsaMPDLGKSRRKLKIAIGAMLVADVVAAGVLFSPLVGSADSRRTQITELRVELVKKTREA
Ga0073994_1078477623300030991SoilMPDLGNSRRKLKIAISAMLVTDIVAVAVLFSPLVGSADSRRMQLNLLRAELTKKTREV
Ga0170834_10220954923300031057Forest SoilMPDFANSRRKLKIAIGVMLATDVVAVAVLFSPLVGSADSRQLQLNQLRVELHKKT
Ga0265329_1007546633300031242RhizosphereMPDLQNTRRKLKIAIAAMVVADVIAAGVLFSPLVGSSD
Ga0310686_11285916313300031708SoilMPDFRDSRRKLKIAIGAMLAVDVIAAAVLFSPLVGSQESRRMQIYQLRAELTKKTREVEP
Ga0302321_10264442213300031726FenMPDLRNSRRKLKIAIGTMLAADVVAMAVLFSPLVGSADSRLL
Ga0307468_10199024613300031740Hardwood Forest SoilMPDLGNSRRKLKMAIGAMLAADVLAAAVLFSPLVGSADSR
Ga0302322_10250009123300031902FenMADLRVIRRKLKIAIAALAAVDVAAVALLFSPLVGSA
Ga0335079_1002606813300032783SoilMPDLGNTRRKLKIAIAAMVVVDVVAAGVLFSPLVGSTDSRQLQL
Ga0335077_1150101723300033158SoilMADLHSTRRKLKIAVVAMLVADMVAVGVLFSPLVGSAESRQ
Ga0371487_0244838_2_1873300033982Peat SoilMPDFGKSRRKLKIAIGAMLVADVAAVAVLFSPLVGSADSRKLEINELKAELTKKTREVEPLR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.