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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F077608 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 117 |
| Average Sequence Length | 46 residues |
| Representative Sequence | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNH |
| Number of Associated Samples | 104 |
| Number of Associated Scaffolds | 117 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 95.73 % |
| % of genes near scaffold ends (potentially truncated) | 93.16 % |
| % of genes from short scaffolds (< 2000 bps) | 90.60 % |
| Associated GOLD sequencing projects | 97 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.48 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (76.068 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.222 % of family members) |
| Environment Ontology (ENVO) | Unclassified (25.641 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (61.538 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 52.11% β-sheet: 0.00% Coil/Unstructured: 47.89% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.48 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 117 Family Scaffolds |
|---|---|---|
| PF14805 | THDPS_N_2 | 80.34 |
| PF01546 | Peptidase_M20 | 3.42 |
| PF02911 | Formyl_trans_C | 0.85 |
| PF00857 | Isochorismatase | 0.85 |
| PF00132 | Hexapep | 0.85 |
| PF05656 | DUF805 | 0.85 |
| PF04221 | RelB | 0.85 |
| PF07969 | Amidohydro_3 | 0.85 |
| COG ID | Name | Functional Category | % Frequency in 117 Family Scaffolds |
|---|---|---|---|
| COG0223 | Methionyl-tRNA formyltransferase | Translation, ribosomal structure and biogenesis [J] | 0.85 |
| COG1335 | Nicotinamidase-related amidase | Coenzyme transport and metabolism [H] | 0.85 |
| COG1535 | Isochorismate hydrolase | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.85 |
| COG3077 | Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module | Defense mechanisms [V] | 0.85 |
| COG3152 | Uncharacterized membrane protein YhaH, DUF805 family | Function unknown [S] | 0.85 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 76.07 % |
| All Organisms | root | All Organisms | 23.93 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 22.22% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 8.55% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 7.69% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 5.98% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 5.98% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 5.13% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.13% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.27% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.27% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 4.27% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 3.42% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.56% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 1.71% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.71% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.71% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.71% |
| Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 1.71% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.71% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 0.85% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.85% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.85% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.85% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.85% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.85% |
| Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 0.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.85% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.85% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.85% |
| Attine Ant Fungus Gardens | Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens | 0.85% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000567 | Peat soil microbial communities from Weissenstadt, Germany - SII-2010 | Environmental | Open in IMG/M |
| 3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
| 3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
| 3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
| 3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
| 3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009523 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG | Environmental | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300012181 | Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG | Host-Associated | Open in IMG/M |
| 3300014162 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG | Environmental | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014493 | Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG | Environmental | Open in IMG/M |
| 3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300017930 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5 | Environmental | Open in IMG/M |
| 3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
| 3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300017972 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300017973 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG | Environmental | Open in IMG/M |
| 3300017974 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG | Environmental | Open in IMG/M |
| 3300017975 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300018013 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100 | Environmental | Open in IMG/M |
| 3300018086 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG | Environmental | Open in IMG/M |
| 3300018088 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Host-Associated | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026308 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes) | Environmental | Open in IMG/M |
| 3300026810 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 16 (SPAdes) | Environmental | Open in IMG/M |
| 3300027010 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes) | Environmental | Open in IMG/M |
| 3300027635 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027703 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes) | Environmental | Open in IMG/M |
| 3300027775 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes) | Environmental | Open in IMG/M |
| 3300027853 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027855 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
| 3300027889 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029943 | I_Palsa_N3 coassembly | Environmental | Open in IMG/M |
| 3300029999 | I_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300030007 | I_Palsa_E1 coassembly | Environmental | Open in IMG/M |
| 3300030503 | III_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300030618 | II_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300030659 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2) | Environmental | Open in IMG/M |
| 3300030707 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2) | Environmental | Open in IMG/M |
| 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031469 | Fir Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
| 3300031546 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23 | Environmental | Open in IMG/M |
| 3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
| 3300031736 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21 | Environmental | Open in IMG/M |
| 3300031748 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22 | Environmental | Open in IMG/M |
| 3300031764 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27 | Environmental | Open in IMG/M |
| 3300031771 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19 | Environmental | Open in IMG/M |
| 3300031781 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20 | Environmental | Open in IMG/M |
| 3300031793 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21 | Environmental | Open in IMG/M |
| 3300031894 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18 | Environmental | Open in IMG/M |
| 3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
| 3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
| 3300031946 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172 | Environmental | Open in IMG/M |
| 3300032051 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26 | Environmental | Open in IMG/M |
| 3300032060 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18 | Environmental | Open in IMG/M |
| 3300032064 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17 | Environmental | Open in IMG/M |
| 3300032090 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22 | Environmental | Open in IMG/M |
| 3300032091 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25 | Environmental | Open in IMG/M |
| 3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
| 3300033134 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2 | Environmental | Open in IMG/M |
| 3300033289 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI12270J11330_102019011 | 3300000567 | Peatlands Soil | MITMAIGLGAGVFYWLGIYKLAFWILIYAIVYGGLS |
| Ga0062385_104901181 | 3300004080 | Bog Forest Soil | MIVMSTALCAGVFYWLGFYKLAFWILTYATVYGGLGVLRG |
| Ga0062384_1013013561 | 3300004082 | Bog Forest Soil | MITMSIALCAGVFYWLGSYKLAFWILTYAIVYGGLGVLRGDN |
| Ga0062387_1016893702 | 3300004091 | Bog Forest Soil | MITMGIGVCAGVFYWLGCYKLAFWILVYAIVYGALGVLRG |
| Ga0066395_100022809 | 3300004633 | Tropical Forest Soil | MIAMGIGLVAGVFYWLASYKLAFWILIYATVYGALGILRGDNHARPI* |
| Ga0062594_1021931842 | 3300005093 | Soil | MMTMAIGLVAGIFYWIAWYKLAFWILVYAIIYGGLGVLRGDNQAHALLRRDSALTIAI |
| Ga0066388_1016229171 | 3300005332 | Tropical Forest Soil | MITMAIGRVAGIFNWMAWYKLAFWILLYAIIYGGLALCAA |
| Ga0070710_105513472 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MMTMAIGLVAGIFYWIAWYKLAFWVLVYAIVYGGLGVLRGD |
| Ga0066705_103757992 | 3300005569 | Soil | MITMGIGLVAGVFYWLASYKLVFWILIYAIIYGGLGIL |
| Ga0066654_107325341 | 3300005587 | Soil | MITMGIGLLAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHIRPIF |
| Ga0070763_107689882 | 3300005610 | Soil | MITMAIGLGAGVFYWLGNYNLAFWILVYAIVYGGLSVL |
| Ga0066903_1003270851 | 3300005764 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHARPV |
| Ga0070766_107327622 | 3300005921 | Soil | MITMAIGLAAGIFYWLAWYKLAFWILIYAIIYGGLGALRGDNQ |
| Ga0066656_109793131 | 3300006034 | Soil | MITMGIGLLAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHIRPFFRGDSEF |
| Ga0070712_1000876504 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MITMGIGVVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHARPVFRGDSE |
| Ga0079222_123277712 | 3300006755 | Agricultural Soil | MITMGIGLVAGVFYWLASYKLAFWTVLYAIIYGGLGILRGDNHTR |
| Ga0066659_113686901 | 3300006797 | Soil | MITMGIGLAAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPIYRG |
| Ga0079221_116503531 | 3300006804 | Agricultural Soil | MITMGIGVVAGIFYWLASYKLAFWILVYAIIYGGLGILRGDNHARPLFRGDSE |
| Ga0079220_101554803 | 3300006806 | Agricultural Soil | MRIGLVAGVFYWLASYKLAFWLVVYAIIYGGLGILRGDNH |
| Ga0073928_110807582 | 3300006893 | Iron-Sulfur Acid Spring | MITMAIGLAAGIFSWLAWYKLAFWILIYAIIYGGLGALRGDNQTHALLR |
| Ga0105241_112734801 | 3300009174 | Corn Rhizosphere | MMTMAIGLVAGIFYWIAWYKLAFWVLVYAIIYGGLGVLRGDNQAHALL |
| Ga0116221_13112542 | 3300009523 | Peatlands Soil | MITMAIGLGAGVFYWLGIYKLAFWILIYAIVYGGLSVLRGHGQI |
| Ga0126374_110528562 | 3300009792 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRD |
| Ga0126370_103479262 | 3300010358 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFRILVYAIIYGGLGILRGDNHARPVFR |
| Ga0126370_122443462 | 3300010358 | Tropical Forest Soil | MITMAIGLAAGVFYWLAWYKLAFWILIYAIIFTGLGVLRGDNQRHALLTPL* |
| Ga0126376_122740991 | 3300010359 | Tropical Forest Soil | MITMAIGRVAGIFNWMAWYKLAFWILLYATIYGSLGALRGDNLAHALLRRDSATDDRGAH |
| Ga0126381_1026031201 | 3300010376 | Tropical Forest Soil | MITMAIGLTAGVFYWLAWYKLAFWILIYAIIYGGLGVLRGDNMLYCGATRL* |
| Ga0126381_1041759522 | 3300010376 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNQVRPVFRGDSEF |
| Ga0136449_1033739311 | 3300010379 | Peatlands Soil | MITMGIAFGAGVFYWLGCYKLAFWVLVYAIIYGGLGALRGDNQTQPVYRGGSGLT |
| Ga0134124_118223802 | 3300010397 | Terrestrial Soil | MMTMAIGLVAGIFYWIAWYKLAFWILVYAIIYGGL |
| Ga0126383_100215925 | 3300010398 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILIYATVYGALGILRGDNHARPI* |
| Ga0126383_125738221 | 3300010398 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHARPL |
| Ga0153922_10209491 | 3300012181 | Attine Ant Fungus Gardens | MTIGLAAGVFYWLACYKLAFWILIYAIIYGGLGALRGDNQAHALLRRDSALTIA |
| Ga0181538_103807321 | 3300014162 | Bog | MITMGIAVCAGLFYWLAWYKLAFWILIYAIVYGGLCVLRGNPTQLVHRRDS |
| Ga0163163_125850241 | 3300014325 | Switchgrass Rhizosphere | MMTMAIGLVAGIFYWIAWYKLAFWILVYAIIYGGLGVLRGDNQAHALLRRDSAL |
| Ga0182016_104631282 | 3300014493 | Bog | MITMTIAMAAGVSYWLGSYTLAFWILVYAIIYGVLGVLRGDERAQL |
| Ga0182024_111012221 | 3300014501 | Permafrost | MITMGIVVGAGLCYWLGCYKLAFWILAYAIVYGGLGALRGDNQTQ |
| Ga0182024_117380232 | 3300014501 | Permafrost | MITMGIGFGAGVFYWLADYKLAFWILVYAIIYGALGALR |
| Ga0182033_100266905 | 3300016319 | Soil | MITMEIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILR |
| Ga0182033_102295593 | 3300016319 | Soil | MITMGIALVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNH |
| Ga0182034_106061892 | 3300016371 | Soil | MITMAIRLVAGIFYWMAWYKLAFWILLYAIIYGGLGALRGDNQAHALLRRNSALTI |
| Ga0182034_111785101 | 3300016371 | Soil | MITMGIALVAGLFYWLGCYKLAFWILIYTIVYGGLGVLRGDNHT |
| Ga0187825_102548532 | 3300017930 | Freshwater Sediment | MITMGIGLVAGVFYWLASYKLAFWILVYAIIYGGLG |
| Ga0187817_109954891 | 3300017955 | Freshwater Sediment | MITMAIAVGAGVFYWLSLYKLAFWILIYAIIYGGLGA |
| Ga0187783_100852054 | 3300017970 | Tropical Peatland | MITMAIGLAAGIFYWLAWYKLAFWILIYAIIYGGLGVLRGDNQMHALLRRDSAL |
| Ga0187781_113867471 | 3300017972 | Tropical Peatland | MITMCIALGAGLFYWLGFYKLSFWVWTYAIIYGGLGVLR |
| Ga0187780_109387561 | 3300017973 | Tropical Peatland | MITMGIALGAAVFYWFGFYKLAFWILTYAIVYGGLGILRGDNHARLL |
| Ga0187780_113160182 | 3300017973 | Tropical Peatland | MITMGIGLVAGIFYWLACYKLAFWILVYAIIYGALGALRGDNH |
| Ga0187777_109987262 | 3300017974 | Tropical Peatland | MITMSIGVCAGLFYWLAWYKLAFWISIYAIVYGGLSVIR |
| Ga0187782_106597011 | 3300017975 | Tropical Peatland | MFTVGIALIAGVFYWLGIYKLAFWVLTYAIVYGALGALRGDNQ |
| Ga0187873_12382321 | 3300018013 | Peatland | MITMAIGLGAGVFYWLGIYKLAFWILIYAIVYGGLSALRGNGQIQPVY |
| Ga0187769_110224212 | 3300018086 | Tropical Peatland | MITMGIALGAAVFYWFGFYKLAFWILTYAIVYGGLGILRGDNHA |
| Ga0187769_111831741 | 3300018086 | Tropical Peatland | MITMGIAVLAGVFYWLGWYKLAFWILTYAIVYGGLGVLRGDNQAQL |
| Ga0187771_107010761 | 3300018088 | Tropical Peatland | MITMSIGVAAGVFYWLGVYKLAFWILVYAIIYGGLSALRGANQTQLVYRRDSGIAS |
| Ga0210403_105998481 | 3300020580 | Soil | MITMGIGVVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHARPVFRGDSEFT |
| Ga0210401_105595423 | 3300020583 | Soil | MITMGIGVLAGIFYWLAWYKLAFWILIYAIVYGGLSVMRGNGHMQPIYR |
| Ga0210408_103873792 | 3300021178 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARP |
| Ga0210396_107651342 | 3300021180 | Soil | MITMTIGLAAGVFYWLACYKLAFWILIYAIIYGGLGA |
| Ga0210398_100322901 | 3300021477 | Soil | MITMAIGLGAGVFYWLGNYNLAFWILVYAIVYGGLSVVRGNGRMQPIYR |
| Ga0126371_110975051 | 3300021560 | Tropical Forest Soil | MITMAIGLSGGVFYWLNDYKVAFWILIYAIVYGALG |
| Ga0126371_127817671 | 3300021560 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNH |
| Ga0228598_10566992 | 3300024227 | Rhizosphere | MITMGIAVCAGLFYWLAWYKLAFWILIYAIVYGGLC |
| Ga0207692_102886132 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MITMGIGLVAGVFYWLASYKLAFWIAVYAIIYGGLGIVRGDNHARPIFRGDNRA |
| Ga0207693_100977291 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MITMGIGVVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHARPVFRGDSEFTVVV |
| Ga0207663_115668242 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MITMGIGVVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNH |
| Ga0207700_111741831 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | MITMGIGLVAGVFYWLASYKLAFWIAVYAIIYGGLGIVRGDNH |
| Ga0209265_11841432 | 3300026308 | Soil | MITMGIGLLAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHIRPIFRRHSEFT |
| Ga0207801_1084422 | 3300026810 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYSGLGILRGDNHARPIF |
| Ga0207839_10052553 | 3300027010 | Tropical Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGL |
| Ga0209625_10540721 | 3300027635 | Forest Soil | MITMAIGLGAGVFYWLGIYKLAFWILVYAIVYGGLSVLRGHGHIQPIYRRD |
| Ga0207862_11956592 | 3300027703 | Tropical Forest Soil | MITMGIALVAGLFYWLGCYKLAFWILIYTIVYGGLGVLRGDNHTQT |
| Ga0209177_101171972 | 3300027775 | Agricultural Soil | MITMGIGLVAGVFYWLASYKLAFWTVLYAIIYGGLGILRGDNH |
| Ga0209274_104822672 | 3300027853 | Soil | MITMGIGVCAGVFYWLGCYKLAFWILIYGIVYGALGVLRGD |
| Ga0209693_102800602 | 3300027855 | Soil | MITMAIGLGAGVFYWLGIYKLAFWILVYAIVYGGLSVL |
| Ga0209693_102926912 | 3300027855 | Soil | MITMAIGLGAGVFYWLGNYNLAFWILVYAIVYGGLSVLRGNGR |
| Ga0209167_102272941 | 3300027867 | Surface Soil | MITIGIAVLAGMFYWLGWYKMAFWILTYAIVYGGWNVLRGDNQRQ |
| Ga0209465_1000001734 | 3300027874 | Tropical Forest Soil | MIAMGIGLVAGVFYWLASYKLAFWILIYATVYGALGILRGDNHARPI |
| Ga0209380_101943533 | 3300027889 | Soil | MITMAIGLAAGIFYWLAWYKLAFWILIYAIIYGGLGALRGDNQTHA |
| Ga0209526_107932611 | 3300028047 | Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILR |
| Ga0308309_106669442 | 3300028906 | Soil | MITMAIGLGAGVFYWLGIYKLAFWILIYAIVYGGLSVLRGHGHIQPI |
| Ga0311340_105818881 | 3300029943 | Palsa | MITMGIAVGAGVFYWLGLYQLAFWILIYAIIYGGLGALRGDNQSQLVYRRGSG |
| Ga0311339_101491071 | 3300029999 | Palsa | MITMAIAVGAGLFYWLGSYQLAFWILVYAIVYGGLVALRGHDQRRAVQRR |
| Ga0311338_110607382 | 3300030007 | Palsa | MITMGIALVAGVFYWLGVYKLAFWILIYAIIYGGL |
| Ga0311370_105022173 | 3300030503 | Palsa | MITMGIAVGAGVFYWLGLYQLAFWILIYAIIYGGLGALRGDNQ |
| Ga0311354_114682601 | 3300030618 | Palsa | MITMGIGFGAGVFYWLADYKLAFWILVYAIIYGALGALRDYNQ |
| Ga0316363_101716662 | 3300030659 | Peatlands Soil | MITMGIAVLAGVFYWLGWYKLAFWILTYAIVYGGLNVLRGDNQAQ |
| Ga0310038_103044922 | 3300030707 | Peatlands Soil | MITMAIGLGAGVFYWLGIYKLAFWILIYAIVYGGLSALRGNGQIQPV |
| Ga0265760_101319832 | 3300031090 | Soil | MITMGIAVCAGLFYWLAWYKLAFWILIYAIVYGGLCVLRGNP |
| Ga0170819_171851611 | 3300031469 | Forest Soil | MITMGIGLVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHAR |
| Ga0318516_104114961 | 3300031543 | Soil | MITMAIGLVAGIFYWMAWYKLAFWILLYAIIYGGLG |
| Ga0318538_103002282 | 3300031546 | Soil | MITMGIGLVAGVFYWMASYKLAFWILIYAIIYGGLGILRGDNHARPLFSRRFRVHCGPA |
| Ga0318561_104052162 | 3300031679 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPL |
| Ga0310686_1025943361 | 3300031708 | Soil | MITMGIVVGAGLCYWLGCYKLAFWILAYAIVYGGLGALRGDNQTQFAY |
| Ga0307474_105640231 | 3300031718 | Hardwood Forest Soil | MITMGIGVVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNHARPLFRGDS |
| Ga0307474_111443071 | 3300031718 | Hardwood Forest Soil | MITMAIGLGAGVFYWLGIYKLAFWILVYAIVYGGLS |
| Ga0318501_105882512 | 3300031736 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPLFSRRFRVHCGPA |
| Ga0318492_102282712 | 3300031748 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPLFSRRFRVH |
| Ga0318535_104614552 | 3300031764 | Soil | MITMGIGLIAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPLFSRRFRVHC |
| Ga0318546_101166141 | 3300031771 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPLFRGDSEFT |
| Ga0318546_101837641 | 3300031771 | Soil | MRAKGQVMITMAIGFSGGVFYWLNDYKLAFWILIYAIVYGALGV |
| Ga0318547_105368862 | 3300031781 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPLFSR |
| Ga0318548_101421642 | 3300031793 | Soil | MITMGIGLVAGVFYWLASYKLAFWILVYAIIYGGLGIL |
| Ga0318522_102056721 | 3300031894 | Soil | MITMGIGLVAGVFYWLASYKLAFWILVYAIIYGGLGILRGDNQVRPVFRG |
| Ga0318520_109208671 | 3300031897 | Soil | MFSMGIGLVAGVFYRLASYKLAFWILIYAIIYGGLGILRGENHA |
| Ga0310912_110553892 | 3300031941 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPLFRGVPSSLWPC |
| Ga0310910_107867281 | 3300031946 | Soil | MITMCIGVAAGVFYWLAWYKLAFWILVYAIIYGGLGAIRGDNQANALLRRDS |
| Ga0318532_101689012 | 3300032051 | Soil | MITMEIGLVAGVFYWLASYKLAFWILIYAIIYGGLGI |
| Ga0318505_104688222 | 3300032060 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGRGILRGDNHARPLFSR |
| Ga0318510_100834441 | 3300032064 | Soil | MITMGIGLVAGVFYWLASYKLAFWILIYAIIYGGLGILRGENHARPLFRGDSEFTV |
| Ga0318518_105150272 | 3300032090 | Soil | MITMGIGLIAGVFYWLASYKLAFWILIYAIIYGGLGILRGDNHARPLFRGDSEFTVALL |
| Ga0318577_103439832 | 3300032091 | Soil | MITMCIGVAAGVFYWLAWYKLAFWILVYAIIYGGLGAIRGDNQANAL |
| Ga0311301_109676721 | 3300032160 | Peatlands Soil | MITMSIAVGAGAFYWLAWYKLAFWILIYAIIYGGMDTLRGDSQ |
| Ga0306920_1036834101 | 3300032261 | Soil | MLTMAIGPVAGIFNWMAWYKLAFWILLYATIYGSLGALRGDNLAHALLR |
| Ga0335081_102765391 | 3300032892 | Soil | MITMAVVVAAGLCYGFSFYKLAFWILAYAIVYSGLGALRGDNQVQFLYRGSSGV |
| Ga0335073_104435611 | 3300033134 | Soil | MITMAIAVGAGLFYWLGSYQPAFWILVYAIVYGGLVALRGHDKRRAMQRRDSALTVAV |
| Ga0310914_105431021 | 3300033289 | Soil | MITMAIGFSGGVFYWLNDYKVAFWILIYAIVYGALGVLRGDNHLQPLY |
| Ga0310914_109224821 | 3300033289 | Soil | MITMAIGLAARVFYWLTWYKLAFWILIYAIIYGGLGVL |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |