Metagenome / Metatranscriptome Family F077602

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077602
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	88 residues
Representative Sequence	VSELEAIGGEIEDAIERVRVPAYVIDRHGIIRWLNPAAQKIVGDVRGRQLTSVVAPEETRRAQEIFTRNLFGPPAGSDNKGVVI
Number of Associated Samples	104
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.39 %
% of genes near scaffold ends (potentially truncated)	99.15 %
% of genes from short scaffolds (< 2000 bps)	97.44 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.436 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.239 % of family members)
Environment Ontology (ENVO)	Unclassified (35.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.009 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.04% β-sheet: 8.04% Coil/Unstructured: 58.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF02518	HATPase_c	7.69
PF13426	PAS_9	2.56
PF06772	LtrA	2.56
PF00989	PAS	1.71
PF02036	SCP2	1.71
PF05988	DUF899	1.71
PF13188	PAS_8	1.71
PF13185	GAF_2	0.85
PF02653	BPD_transp_2	0.85
PF00009	GTP_EFTU	0.85
PF10009	DUF2252	0.85
PF04116	FA_hydroxylase	0.85
PF11139	SfLAP	0.85
PF09723	Zn-ribbon_8	0.85
PF07676	PD40	0.85
PF02600	DsbB	0.85
PF14023	DUF4239	0.85
PF02656	DUF202	0.85
PF14742	GDE_N_bis	0.85
PF14561	TPR_20	0.85
PF00353	HemolysinCabind	0.85
PF13792	Obsolete Pfam Family	0.85
PF04075	F420H2_quin_red	0.85
PF13462	Thioredoxin_4	0.85
PF01384	PHO4	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	2.56
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	1.71
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.85
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.85
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	76.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.98 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.56 %
Unclassified	root	N/A	2.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.56 %
Unclassified	root	N/A	2.56 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.71 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.71 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.55 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	2.56 %
Unclassified	root	N/A	2.56 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.71 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.71 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.55 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	2.56 %
Unclassified	root	N/A	2.56 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.71 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.71 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.85 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.55 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	2.56 %
Unclassified	root	N/A	2.56 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.71 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.85 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.85 %
Pseudomonas gingeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas gingeri	0.85 %
Cupriavidus gilardii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus gilardii	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.55 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	2.56 %
Unclassified	root	N/A	2.56 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.71 %
Deinococcus maricopensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus maricopensis	0.85 %
Pseudomonas sp. GM84	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM84	0.85 %
Pseudomonas gingeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas gingeri	0.85 %
Cupriavidus gilardii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus gilardii	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573002\|GZIGXIF02G1GFR	Not Available	513	Open in IMG/M
3300000953\|JGI11615J12901_10175266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus maricopensis	526	Open in IMG/M
3300000956\|JGI10216J12902_100743348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300000956\|JGI10216J12902_107656766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300000956\|JGI10216J12902_108165331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300001686\|C688J18823_10107469	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300004114\|Ga0062593_100094269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2083	Open in IMG/M
3300004643\|Ga0062591_100132954	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300004643\|Ga0062591_101346003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300005162\|Ga0066814_10101381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300005169\|Ga0066810_10153650	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005294\|Ga0065705_10784832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas gingeri	616	Open in IMG/M
3300005332\|Ga0066388_104471943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300005338\|Ga0068868_100936693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	789	Open in IMG/M
3300005341\|Ga0070691_10378637	Not Available	792	Open in IMG/M
3300005343\|Ga0070687_100106121	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300005355\|Ga0070671_100058960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3195	Open in IMG/M
3300005435\|Ga0070714_100223109	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300005435\|Ga0070714_102086519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300005436\|Ga0070713_101520489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300005455\|Ga0070663_100647093	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005457\|Ga0070662_101302333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	625	Open in IMG/M
3300005526\|Ga0073909_10676858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005530\|Ga0070679_100626664	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300005616\|Ga0068852_100730602	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300005841\|Ga0068863_101787860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300005842\|Ga0068858_100214041	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300005843\|Ga0068860_102230583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300006028\|Ga0070717_11911940	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300006046\|Ga0066652_100742814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300006046\|Ga0066652_100956568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300006058\|Ga0075432_10376624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	607	Open in IMG/M
3300006058\|Ga0075432_10377307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300006175\|Ga0070712_100213970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300006196\|Ga0075422_10428804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	589	Open in IMG/M
3300006237\|Ga0097621_101377726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300006796\|Ga0066665_11564828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus gilardii	517	Open in IMG/M
3300006854\|Ga0075425_101023878	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300006854\|Ga0075425_102586279	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300006904\|Ga0075424_100713533	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300006953\|Ga0074063_11918190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM84	703	Open in IMG/M
3300009100\|Ga0075418_10842818	All Organisms → cellular organisms → Bacteria → Terrabacteria group	990	Open in IMG/M
3300009156\|Ga0111538_11491270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300010359\|Ga0126376_11705667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300010366\|Ga0126379_12023008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300010371\|Ga0134125_12344879	Not Available	580	Open in IMG/M
3300010375\|Ga0105239_10401782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1551	Open in IMG/M
3300010375\|Ga0105239_11368671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300010376\|Ga0126381_103125715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300010398\|Ga0126383_13357258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300012207\|Ga0137381_11119651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300012208\|Ga0137376_10834705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300012350\|Ga0137372_10819610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300012902\|Ga0157291_10343889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300012907\|Ga0157283_10302466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300012911\|Ga0157301_10089632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300012923\|Ga0137359_10682282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300012955\|Ga0164298_11399432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300012960\|Ga0164301_10506762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300012960\|Ga0164301_10538033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300012961\|Ga0164302_11045947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300012961\|Ga0164302_11599214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300012976\|Ga0134076_10051254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1557	Open in IMG/M
3300012984\|Ga0164309_10346938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1088	Open in IMG/M
3300012987\|Ga0164307_10154085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300012987\|Ga0164307_10820387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300012988\|Ga0164306_11506918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300013297\|Ga0157378_11151211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300013307\|Ga0157372_13070622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300013308\|Ga0157375_10420603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1502	Open in IMG/M
3300014157\|Ga0134078_10670143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300014325\|Ga0163163_12224407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300014745\|Ga0157377_10420572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300015245\|Ga0137409_10953148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300016371\|Ga0182034_11142308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300017966\|Ga0187776_11603921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300019361\|Ga0173482_10723887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300019362\|Ga0173479_10679279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300022756\|Ga0222622_10660136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300025899\|Ga0207642_10554505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	710	Open in IMG/M
3300025900\|Ga0207710_10048761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1896	Open in IMG/M
3300025905\|Ga0207685_10297386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300025928\|Ga0207700_11794474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300025929\|Ga0207664_11634886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300025931\|Ga0207644_10329501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300025933\|Ga0207706_11577958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300025935\|Ga0207709_10438872	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300025935\|Ga0207709_10625656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300025941\|Ga0207711_12087059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300025944\|Ga0207661_10495819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300025945\|Ga0207679_11622416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300025972\|Ga0207668_10700649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300026078\|Ga0207702_10477929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M
3300026088\|Ga0207641_11786449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300027821\|Ga0209811_10270233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300027821\|Ga0209811_10292265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300028379\|Ga0268266_12248393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300028380\|Ga0268265_12667407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300028787\|Ga0307323_10118340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300028793\|Ga0307299_10020977	All Organisms → cellular organisms → Bacteria	2344	Open in IMG/M
3300028811\|Ga0307292_10093678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1174	Open in IMG/M
3300028876\|Ga0307286_10028948	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300028884\|Ga0307308_10097627	All Organisms → cellular organisms → Bacteria → Proteobacteria	1397	Open in IMG/M
3300031770\|Ga0318521_10587581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	673	Open in IMG/M
3300031779\|Ga0318566_10540343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300031781\|Ga0318547_10926381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300031796\|Ga0318576_10524357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300031819\|Ga0318568_10881486	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031821\|Ga0318567_10481222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300031893\|Ga0318536_10430546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300031910\|Ga0306923_11089670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300031912\|Ga0306921_12160679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300032001\|Ga0306922_12318176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300032059\|Ga0318533_10709525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300032076\|Ga0306924_12493239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300032174\|Ga0307470_11914797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300032828\|Ga0335080_10983365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	860	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.38%
Host-Associated	Host-Associated	31.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.52%
Plants	Host-Associated → Plants	31.62%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.69%
Roots	Host-Associated → Plants → Roots	1.71%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	11.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE1_03120740	2189573002	Grass Soil	VAGLKSIEGDIESAIERVRVPAYVIDRHGVIRWVNQAAEKIVGDVRGLQMTSVLAPEERRRGREIFIRNLLGPPHGSDNRGVALSAEGERITIEVSAVPXKSGDRVI
JGI11615J12901_101752661	3300000953	Soil	VAGLKEIGGEVESALERVRVPAYMIDRHGIIRWINAAAERIVGDVRGRQMTSVLAPEERRRGREIFTRNLMGPPRGSDNRAVFLAADGERIT
JGI10216J12902_1007433483	3300000956	Soil	MTGLKKLGGDVEGALQRVRVPAYVIDRHGIIRWLNPAAKRLVGDAVGRQMTSVLAPEERRRGREIFTRNLLGPPEGSDNQAVF
JGI10216J12902_1076567661	3300000956	Soil	VEGTLERARVPAYVIDRTGLIRWLNPAAQRLVGDVRGRHLTSVLAPEEKRRGQEIFTRNLLGPPEGSDNRGVLLN
JGI10216J12902_1081653313	3300000956	Soil	LTSEAADPHTGLMVGLKDLGVDVEEALGRVRVPAYVIDRSGIIRWINPAAQRIVGDVRGRQMTSVLAPEERRRGREIFIRNLTGPPEGSDNRGVLLTAEGERIAVELS
C688J18823_101074691	3300001686	Soil	MSSPALDEGYPWLFCQTHGVSDLEAIGGDVTDAIERVRVPAYVIDAQGIIRWLNPAARKIVGDVRGRHLTSVVAPEETRRAQEIFTRNLIGPSAGSDHKGVVIGAD
Ga0062593_1000942693	3300004114	Soil	MEDVSELEAIGGDVEDAIERVRVPAYIIDAHGIIRWLNPAARKIVGDVRGRHLTSVVAPEETRRARAIFTRNLFGPPTGSDNRAVVIGADGER
Ga0062591_1001329543	3300004643	Soil	MSELKSFGSDVEDAVSRVRVPAYLIDKHGIIRWLNPAARKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLGPPDGSDNKGVLHDADGERVSVVGQIKDVEERPSRLRHLIRT*
Ga0062591_1013460032	3300004643	Soil	MSELEAIGGEVEDAIERVRVPAYVIDRHGIIRYLNPAARKLVGDVRGRQLTSVVAPEETRRAREIFARNLVGPRSGSDNKGVVLDANGERLSV
Ga0066814_101013812	3300005162	Soil	MSELESLGGEVEDAIDRVRVPAYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGADGERLSVELSAVP
Ga0066810_101536501	3300005169	Soil	MSELKSFGSDVEDAISRVRVPAYLIDRHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLGPPEGSDNKGVLLDADGERVSVE
Ga0065705_107848321	3300005294	Switchgrass Rhizosphere	MSELESLSGEVADAIDRVRVPAYVIDRHGIIRWLNPAARKLVGDVRRRHLTSVVAPEESRRAREIFTRNLFGPSAGSDNKAVVMGADGERLSV
Ga0066388_1044719431	3300005332	Tropical Forest Soil	MEGALERARVPAYAIDSFGIVRWVNPAAKRVVGDVRGRHLTSVLAPEERRRGQDIFMRNLLGPPEGADNRGVLLSAEGERIEAELSAIPLESGG
Ga0068868_1009366932	3300005338	Miscanthus Rhizosphere	MSELKSFGSDVEDAINRVRVPAYLIDKHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLGPPDGSDNKAVLLDADGERVSVELSAVPL
Ga0070691_103786372	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAGLGQIGADVEGALERVSVPAYVVDRHGVIRWINAAAERLVGDVRGKQMTTPLAPEERRRGREVFARNLLG
Ga0070687_1001061213	3300005343	Switchgrass Rhizosphere	VSELEAIGGEIEDAIERVRVPAYVIDRHGIIRWLNPAAQKIVGDVRGRQLTSVVAPEETRRAQEIFIRNI
Ga0070671_1000589606	3300005355	Switchgrass Rhizosphere	MPLRPPKGLRSDRPARETDRVAGLEDLGADVESAISRVRVPAYMIDSSGIIRWVNPAAEKIVGDVRGRQLTSVVAPEETRRAREIFTRNLQG
Ga0070714_1002231093	3300005435	Agricultural Soil	MAELDPIGGDVEDAIARVRVPAYMIDTHGVIRWLNPAAMKLVGDVRGRQISSVVAPEERRRAQEIFTRNLFGPPAGSDNRGVALDADGER
Ga0070714_1020865192	3300005435	Agricultural Soil	VTRLREIGGDVEGALERVGVPAYMIDRHGIIRWLNPAAKRLVGDAVGRQMTSVLAPEEGRRGRELFVRNLMGPPEGSDNRGVFVGPDGERFTMEV
Ga0070713_1015204892	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLEALGGDIEDAIARVRVPAYVIDRHGIIRWLNAAAVDLVGDARGRQFTSVIAPEETRRAKEIFTRNLHGPPEGSDNTIVGIDVNGERR
Ga0070663_1006470932	3300005455	Corn Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGADGERLSVELSAVP
Ga0070662_1013023331	3300005457	Corn Rhizosphere	VSELEAIGGEVEDAISRVRVPAYVIDAHGIIRWLNPAAEKIVGDVRGRQVTSVVAPEEARRVREIFTRNLFGPP
Ga0073909_106768582	3300005526	Surface Soil	MSELESLGGEVEDAIDRVRVPAYVIDRHGIIRWLNPAARELVGDARGRQFTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVM
Ga0070679_1006266641	3300005530	Corn Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGADGE
Ga0068852_1007306021	3300005616	Corn Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLH
Ga0068863_1017878601	3300005841	Switchgrass Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGADGERLSVELSAVPL
Ga0068858_1002140411	3300005842	Switchgrass Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRN
Ga0068860_1022305831	3300005843	Switchgrass Rhizosphere	MSELKSFGSDVEDAINRVRVPAYLIDKHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLGPPDGSDNK
Ga0070717_119119402	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MELNKLAGDVEDALERVAVPAYAIDRSGIIRWLNPAAQQLVGDARGHHMTSVLAPEERFRGHAIFTRNLTGPREGSVNRS
Ga0066652_1007428141	3300006046	Soil	LLAPWRLQRRGARIKLGAMSDLESIVGDVEGAIERVRVPAYVIDRHGIIRWQNPAGRKLVGDVRGRQFTSVAAPEEIRRVREIFTRNLFGPPSGSDNRVVVIDADGERITVEV
Ga0066652_1009565681	3300006046	Soil	MAGLKDLGVDVEEALGRVRVPAYVIDRSGVIRWINPAAKRIVGDVRGRHMTSVLAPEERRRGHEIFIRNLTGP
Ga0075432_103766241	3300006058	Populus Rhizosphere	VRLAGLESIGGNVESAVERVRVPSYVIDRHGIIRWLNPAAERLVGDARGRQIESVVGPEESRRAREIFVRNLTGPPEGSDNGGVVLGPAGERISLQVSAVPLER
Ga0075432_103773072	3300006058	Populus Rhizosphere	MAGLKQLGGDVEGALHRVGVPAYVIDRHGIIRWLNPAAKRLVGDAVGRQMTSVLAPEERRRGREIFTRNLFGPPEGSDNRGVFLGPNGERFTMEVSG
Ga0070712_1002139702	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MEGLKGIGGEVESALERVRVPAYMIDRHGIIRWINGAAERIVGDVRGRQMTSVLAPEERRRGREIFTRNLMGPPRGSDNRAVFL
Ga0075422_104288041	3300006196	Populus Rhizosphere	VRLAGLESIGGNVESAVERVRVPSYVIDRHGIIRWLNPAAERLVGDARGRQIESVVAPEESRRAREIFVRNLTGPPEGSDNEGVVLGPAGERISLQVSAV
Ga0097621_1013777262	3300006237	Miscanthus Rhizosphere	MPLRPPKGLRSDRPARETDRVAGLEDLGADVESAISRVRVPAYMIDSSGIIRWVNPAAEKIVGDVRGRQLTSVVAPEETRRAREIFTRNLQGPPQGSDNRGVLLSAE
Ga0066665_115648281	3300006796	Soil	MSDLGAIGGEVEDAIERVRVPAYVIDAHGIIRWLNPAARKRVGDVRGRQLTSVVAPEETRRAREIFARNLVGPRAGSDNKVVII
Ga0075425_1010238782	3300006854	Populus Rhizosphere	MPGLKEIDADVEDALARVRVPAYVIDRSGVIRWVNDAARRIVGDVRGRQLTSVLAPEERRRGREIFYRNLTGPREGSDNRGI
Ga0075425_1025862792	3300006854	Populus Rhizosphere	VSEFESIAPEIPGAIRRLRVPAYFIDRHGIIRWLNPAAEKIVGDVRGRHLTSVVAPEESRRAQEIFARNL
Ga0075424_1007135331	3300006904	Populus Rhizosphere	MAGLKQLGGDVEGALHRVGVPAYVIDRHGIIRWLNPAAKRLVGDAVGRQMTSVLAPEERRRGREIFTRNLFGPPEGSDNRGVFLGPDG
Ga0074063_119181901	3300006953	Soil	MSELESLTDEVADAIDRVRVPAYVIDRHGIIRWLNPAARKLVGDVRGRQFTSVVAPEFSRRAREIFSRNLHGPSAGSDNKALVMGA
Ga0075418_108428181	3300009100	Populus Rhizosphere	MAGLKQLGGDVEGALHRVGVPAYVIDRHGIIRWLNPAAKRLVGDAVGRQMTSVLAPEERRRGREIFTRNLF
Ga0111538_114912701	3300009156	Populus Rhizosphere	MAGLKQLGGDVEGALHRVGVPAYVIDRHGIIRWLNPAAKRLVGDAVGRQMTSVLAPEERRRGREIFTRNLFGPPEGSDNRGVFLGPDGERFTMEVS
Ga0126376_117056671	3300010359	Tropical Forest Soil	MGGDVEGALERVGCPAYVIDRYGIIRWINPAAERIVGDVRGKQMTSVLAPEERRRGREAFTRNLHGP
Ga0126379_120230081	3300010366	Tropical Forest Soil	VSAILAWLNLRGGCVIQQTRSQVSELDSLGGEVADAVDRVRVPAYVIDRHGIIRWLNPAARKLVGDVRGRHLTSVVAPEESRRAREIFARNLLGSSAGSDNKITVMGANGERLSV
Ga0134125_123448791	3300010371	Terrestrial Soil	MAGLGQIGADVEGALERVSVPAYVVDRHGVIRWINAAAERLVGDVRGKQMTTPLAPEERRRGREVFARNLLGPPGGSDNRAVLLNAE
Ga0105239_104017823	3300010375	Corn Rhizosphere	LQRITKLSRLQPVSTLEAIGGDVEDAINRVRVPAYVIDPHGIIRWLNPAARALVGDVRGRHFTSVVAPEEKRRAQEIFTRNLFGPAQGSDNKGVVIGVDGEHVEIEVS
Ga0105239_113686711	3300010375	Corn Rhizosphere	VSELEAIGGEVEDAISRVRVPAYVIDAHGIIRWLNPAAEKIVGDVRGRQVTSVVAPEEARRVREIFTRNLFGPPE
Ga0126381_1031257151	3300010376	Tropical Forest Soil	MMLAGMAAWHARSVPKLQEIGADVEDALERVRVPAYVIDRQGIVRWENKAALAVFGDVRGKQITSIVAPEERRRAREIFYRNLTGPPEGSDNK
Ga0126383_133572581	3300010398	Tropical Forest Soil	MEGALERARVPAYAIDSFGIVRWVNPAAQRVVGDVRGRHLTSVLAPEERRRGQEIFMRNLLGPPEGADNRGVLLNAEGERIEAE
Ga0137381_111196511	3300012207	Vadose Zone Soil	MSELEAIGGEIEDAIERVRVPAYVIDRHGIIRYLNPAARKIVGDVRGRQLTSVVAPEESRRAREIFARNLMGPRAG
Ga0137376_108347052	3300012208	Vadose Zone Soil	MSDLGAIGGEVEDAIERVRVPAYVIDAHGIIRWLNPAARKRVGDVRGRQFTSVVAPEETRRAREIFARNLVGP
Ga0137372_108196101	3300012350	Vadose Zone Soil	MSELEAIGGEIEDAIERVRVPAYVIDRHGIIRYLNPAARKIVGDVRGRQLTSVVAPEESRRAREIFARNLMGPRAGSDNKGVVIGADGERVS
Ga0157291_103438891	3300012902	Soil	MPELLTIEDALERVRVPAYFIDPHGIIRWLNPAAMKIVGDVRGRHLTSVVAPEESRRAQEIFARNLMGPPAGSDNKVVV
Ga0157283_103024661	3300012907	Soil	LSELEAIGGEIEDALERVRVPAYFIDPHGIIRWLNPAAMKIVGDVRGRHLTSVVAPEESRRAQEIFARNLMG
Ga0157301_100896321	3300012911	Soil	VSELEAIGGEVEDAISRVRVPAYVIDAHGIIRWLNPAAEKIVGDVRGRQVTSVVAPEEARRVREIFTRNLFGP
Ga0137359_106822822	3300012923	Vadose Zone Soil	VSDLKAISADVESALERVCVPAYVIDRHGIIRWINSAAEKFVGDVRGQQLTSVLAPEERRRGREIFTRNLYGPPQGSDNRAV
Ga0164298_113994321	3300012955	Soil	MSRLESIGVDVEDAIGRVRVPSYVIDRHGIIRWLIPAAMKLVGDVRGRQFTSVIVPEERRRAREIFTRNLFGPPSGSDNRAVGI
Ga0164301_105067621	3300012960	Soil	VSELEALGGEIEDAIDRLRVPSYVIDEHGVIRWLNPAARKLVGDVRGRQLTSVVAPEESRRAREIFTRNLFGPPAGSDNK
Ga0164301_105380332	3300012960	Soil	VSELEAIGGEIEDAIERVRVPAYVIDGHGIIRWLNPAAQKIVGDVRGRQLTSVVAPEETRRAQELFIRNIIGPPAGSDNK
Ga0164302_110459471	3300012961	Soil	LRWSRPEARLESVSELEALGGEIEDAIDRLRVPSYVIDEHGVIRWLNPAARKLVGDVRGRQLTSVVAPEESRRAREIFTRNLFGPP
Ga0164302_115992141	3300012961	Soil	MSNELKSFGSDVEDAIGRVRVPAYVIDKHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETRRAREIFTRNLSGPPDGSDNKVVLIGADGER
Ga0134076_100512544	3300012976	Grasslands Soil	MSHLRALDADVEGALEPINVPAYVIDKHGIIRWLNPAARKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLGPPSGSDNKAVVID
Ga0164309_103469384	3300012984	Soil	VSELEALGGEIEDAIDRLRVPSYVIDEHGVIRWLNPAARKLVGDVRGRQLTSVVAPEESRRAREIFTRNLFGPPA
Ga0164307_101540854	3300012987	Soil	MSGLESIGVDVEDAIGRVRVPAYVIDRHGIIRWLNPAAMKLVGDVRGRQFTSVIVPEERRRAREIFTRNLFGPPSGS
Ga0164307_108203871	3300012987	Soil	MSELETIGGEVEDAIERVRVPAYVIDAHGIIRWLNPAARKRVGDVRGRQLTSVVAPEETRRARELFARKILGNSEVTDAPMVVVDSDG
Ga0164306_115069181	3300012988	Soil	VSGLEELGGDVQGALERVRVPAYVVDRHGIIRWLNPAAKRLVGDVRGRQITTVVAPEERRRVREIFMRNLTGPLEGSDNKGIAIDASGKR
Ga0157378_111512111	3300013297	Miscanthus Rhizosphere	MSELEAIGGEVEDAIDRVRVPAYVFDRHGIIRYLNPAARNLVGDVRARQMTSVLAPEERRRGREIFTRNLMGRPRGSDNRAVFLAADGERITME
Ga0157372_130706221	3300013307	Corn Rhizosphere	LQRITKLSRLQPVSTLEAIGGDVEDAINRVRVPAYVIDPHGIIRWLNPAARALVGDVRGRHFTSVVAPEEKRRSQEIFTRNLFGPAQGSDNKG
Ga0157375_104206031	3300013308	Miscanthus Rhizosphere	VSELEAIGGEIEDAIERVRVPAYVIDGHGIIRWVNPAAQKIVGDVRGRQLTSVVAPEETRRAQEIFIRNIIGPPAGSD
Ga0134078_106701432	3300014157	Grasslands Soil	VPGLEDIDADVEDALERVRVPAYVVDRHGIVRWENRAALAIFGDVRGKQITSLVAPEERRRAREIFFRNLTGPPEGSDNKAVAHDAD
Ga0163163_122244072	3300014325	Switchgrass Rhizosphere	VSELEAIGGNVEDAIERVRVPAYIIDRHGIIRWLNPAARKIVGDVRGRQLTSVVAPEETRRAQEIFTRNLFGPPAGSDNKGVVIGADG
Ga0157377_104205721	3300014745	Miscanthus Rhizosphere	VSELEAIGGEVEDAISRVRVPAYVIDAHGIIRWLNPAAEKIVGDVRGRQVTSVVAPEEARRVREIFTRNLFGPPEGSDNTGVVI
Ga0137409_109531482	3300015245	Vadose Zone Soil	MSELETIGGEVEDAIERVRVPAYVIDAHGIIRWLNPAARKRVGDVRGRQFTSVVAPEETRRAREIFARNLVGPRAGSDNKVVVIDAN
Ga0182034_111423081	3300016371	Soil	MGPQTHWRVPRLEELDAEVEDALERVRVPAYMIDPHGIIRWLNAAAMNIVGDVRGKHFTSVVVPEETRRAKEIFYRNLTGPREGSDNRGIVIGADGE
Ga0187776_116039211	3300017966	Tropical Peatland	MSELRDFGVDADEAIGRVRVPAYLIDAHGIIRWLNPAAMKLVGDVRGRQITSVVAPEETVRARAIFTKNLLGPAEGSDNKGVLLDADGERVSVELSA
Ga0173482_107238872	3300019361	Soil	MEGLKGIGGEVESALERVRVPAYMIDRHGIIRWINGAAERIVGDVRGRQMTSVLAPGERRRGREIFTRNLIGPPKGSDNRAVFLAA
Ga0173479_106792791	3300019362	Soil	MAGLKQLGGDVEGALHRVGVPAYVIDRHGIIRWLNPAAKRLVGDAVGRQMTSVLAPEERRRGREIFTRNLFGPPEGSDNRGVFLGPDGERFTM
Ga0222622_106601361	3300022756	Groundwater Sediment	MSELKSFGSDVEDAISRVRVPAYLIDRHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETRRAREIFTRNLVGPPAGSDNKGVLL
Ga0207642_105545052	3300025899	Miscanthus Rhizosphere	MSELKSFGSDVEDAINRVRVPAYLIDKHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLGPPDGSDNKGVLLDADG
Ga0207710_100487612	3300025900	Switchgrass Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGADGERLS
Ga0207685_102973862	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSELGAIGGEVEDAIERVRVPAYVIDAHGIIRWLNPAARKRVGDVRGRQLTSVVAPEETRRAREIFARNLVGPRAG
Ga0207700_117944741	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LRPVRARSRLDGMSELEAIGGEVEDAIDRVRVPAYVIDRHGIIRYLNPAARKLVGDVRGRQMTSVLAPEERRRGREIFTRNLMGPPRGSDNRAVFLAAD
Ga0207664_116348861	3300025929	Agricultural Soil	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGVDGE
Ga0207644_103295012	3300025931	Switchgrass Rhizosphere	MPLRPPKGLRSDRPARETDRVAGLEDLGADVESAIARVRVPAYVIDSSGIIRWLNPAAEKIVGDVRGRQLTSVVAPEETRRAREIFTRNLQGPP
Ga0207706_115779581	3300025933	Corn Rhizosphere	VSELEAIGGEVEDAISRVRVPAYVIDAHGIIRWLNPAAEKIVGDVRGRQVTSVVAPEEARRVREIFTRNLFGPPEGSDNTGVVIGADGE
Ga0207709_104388721	3300025935	Miscanthus Rhizosphere	MSELKSFGSDVEDAISRVRVPAYLIDKHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLG
Ga0207709_106256562	3300025935	Miscanthus Rhizosphere	VSELEAIGGEIEDAIERVRVPAYVIDRHGIIRWLNPAAQKIVGDVRGRQLTSVVAPEETRRAQEIFTRNLFGPPAGSDNKGVVI
Ga0207711_120870592	3300025941	Switchgrass Rhizosphere	LRSGPARWTIEGVSELEAIGGNVEDAIERVRVPAYIIDRHGIIRWLNPAARKIVGDVRGRQLTSVVAPEETRRAQEIFTRNLFGPPAGSDNKGVVIGADGRRVSIEVSA
Ga0207661_104958193	3300025944	Corn Rhizosphere	VSELEAIGGEIEDAIERVRVPAYVIDGHGIIRWLNPAAQKIVGDVRGRQLTSVVAPEETRRAQEIFTRNLFGPPAGSDNKGVVIGADGRRVSIE
Ga0207679_116224162	3300025945	Corn Rhizosphere	LRSGPARWTIEGVSELEAIGGNVEDAIERVRVPAYIIDRHGIIRWLNPAARKIVGDVRGRQLTSVVAPEETRRAQEIFTRNLFGPPAGSDNKGVVIGADGRRVSIEVS
Ga0207668_107006492	3300025972	Switchgrass Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGVDGERLSVELS
Ga0207702_104779291	3300026078	Corn Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNK
Ga0207641_117864491	3300026088	Switchgrass Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGADGERLSV
Ga0209811_102702331	3300027821	Surface Soil	MSRLESIGVDVEDAIGRVRVPSYVIDRHGIIRWLNPAAMKLVGDVRGQQLTSVVAPEETRRAREIFTRNLHGPAEGSDNRAVVMSAEGE
Ga0209811_102922652	3300027821	Surface Soil	VSELQAIGGDVEDAIERLRVPAYFIDTHGIIRWLNPAAQKIVGDVRGRHLTSVVAPEETRRAQEIFARNLLGPP
Ga0268266_122483931	3300028379	Switchgrass Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVM
Ga0268265_126674071	3300028380	Switchgrass Rhizosphere	MSELESLGGEVEDAIDRVRVPSYVIDRHGIIRWLNPAARKLVGDVRGRQLTSVVAPEFSRRAREIFSRNLHGPSAGSDNKAVVMGADGERLSVELSAV
Ga0307323_101183401	3300028787	Soil	MSELKSFGSDVEDAISRVRVPAYLVDKHGVIRWLNPAARKLVGDAVGRQNTSVVAPEERRRARELFTRNLLGPPEGSDNKGVLLDADGERV
Ga0307299_100209773	3300028793	Soil	MSDLKSFGSDVEDAISRVRVPAYLIDKHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLGPPDGSDNKGVLLDADGERVS
Ga0307292_100936783	3300028811	Soil	MSELKSFGSDVEDAISRVRVPAYLIDKHGIIRWLNPAARKLVGDVRGRQLTSVVAPEETRRAREIFTRNLVGPPAGSDNKGVLIGAD
Ga0307286_100289483	3300028876	Soil	MSDLKSFGSDVEDAISRVRVPAYLIDKHGIIRWLNPAAQKLVGDVRGRQLTSVVAPEETLRARRIFTRNLLGPPDGSDNKGVLLDAD
Ga0307308_100976271	3300028884	Soil	MSDELKSLGSDVEDAIDRVRVPAYVIDKHGIIRWLNPAARKLVGDVRGRQLTSVVAPEETRRAREIFTRNLVG
Ga0318521_105875811	3300031770	Soil	MGPQTHWRVPRLEELDAEVEDALERVRVPAYMIDPHGIIRWLNAAAMNIVGDVRGKHFTSVVVPEETRRAKEIFYRNLTGPREVAIED
Ga0318566_105403431	3300031779	Soil	MGPQTHWRVPRLEELDAEVEDALERVRVPAYMIDPHGIIRWLNAAAMNIVGDVRGKHFTSVVVPEETRRAKEIFYRNLTGPREGSDN
Ga0318547_109263811	3300031781	Soil	MPDLDAIGGNVPSALERVRVPSYVIDRDGIVRRLNAAARAIVGDVRGQHLTSVVAPEEKRRALEIFIRNLTGSPLGSDNHVVV
Ga0318576_105243571	3300031796	Soil	MPDLDAIGGNVPSALERVRVPSYMIDRDGIVRWLNPAARAIVGDVRGQHLTSVVAPEEKRRALEIFIRNLTGSPLGSDNHVVVMGADGERIAV
Ga0318568_108814861	3300031819	Soil	VKRSDARVRETYGVAGLESLGADVESAISRVRVPAYVIDSHGIIRWLNAAAEAIVGDVRGQQLTSVVAPEETRRAREIFTRNLHGPPQGSD
Ga0318567_104812221	3300031821	Soil	MPDLDAIGGNVPSALERVRVPSYVIDRDGIVRWLNAAARAIVGDVRGQHLTSVVAPEEKRRALEIFIRNLTGSPLGS
Ga0318536_104305461	3300031893	Soil	MGPQTHWRVPRLEELDAEVEDALERVRVPAYMIDPHGIIRWLNAAAMNIVGDVRGKHFTSVVVPEETRRAKEIFYRNLT
Ga0306923_110896701	3300031910	Soil	MGPQTHWRVPRLEELDAEVEDALERVRVPAYMIDPHGIIRWLNAAAMNIVGDVRGKHFTSVVVPEETRRAKEIFYRNLTGPREGSDNRGIVIGADGERVSAELSAV
Ga0306921_121606791	3300031912	Soil	MEGALERARVPAYAIDRFGIIRWVNPAAQRVVGDVRGRHLTSVLAPKRRGQEIFMCNLLGPPEGSDNRGVL
Ga0306922_123181761	3300032001	Soil	MGPQTHWRVPRLEELDAEVEDALERVRVPAYMIDPHGIIRWLNAAAMNIVGDVRGKHFTSVVVPEETRRAKEIFYRNLTGPREGSDNRGIVI
Ga0318533_107095251	3300032059	Soil	MGPQTHWRVPRLEELDAEVEDALERVRVPAYMIDPHGIIRWLNAAAMNIVGDVRGKHFTSVVVPEETRRAKEIFYRNLTGPREGSDNRGIVIGADGERVSA
Ga0306924_124932391	3300032076	Soil	MALKAVAGDVESAIERVRVPAYVIDRHGIIRWLNAAAEAIVGDVRGRQFTSVLAPEDTRRGREVFTRNLFGPPEGSDNHLVVISADGERVAVELSGV
Ga0307470_119147971	3300032174	Hardwood Forest Soil	MTRLREIGGDVEGALHRVRVPAYVIDRHGIIRWLNPAAKRLVGDAVGRQMTSVLAPEEGRRGRELFVRNLMGPPEGSDNRGVFLGPDGERFTMEVSGVPL
Ga0335080_109833652	3300032828	Soil	VSRSSESKFEAMSGRESIPGDVEDAIGRVRVPAYVIDRQGIIRWLNPAARGLVGDVRGRQITSVVAPEETRRARDVFTRNLMGPSSGSDNSVVLID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077602

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences