Metagenome / Metatranscriptome Family F077597

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077597
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	42 residues
Representative Sequence	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMR
Number of Associated Samples	78
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.02 %
% of genes near scaffold ends (potentially truncated)	91.45 %
% of genes from short scaffolds (< 2000 bps)	96.58 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.299 % of family members)
Environment Ontology (ENVO)	Unclassified (70.940 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.573 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.12% β-sheet: 0.00% Coil/Unstructured: 34.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00072	Response_reg	27.35
PF00912	Transgly	10.26
PF00550	PP-binding	2.56
PF13467	RHH_4	1.71
PF08028	Acyl-CoA_dh_2	1.71
PF02515	CoA_transf_3	1.71
PF03979	Sigma70_r1_1	1.71
PF13531	SBP_bac_11	0.85
PF13460	NAD_binding_10	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	10.26
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	10.26
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	10.26
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.71
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.71
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.74 %
Unclassified	root	N/A	37.61 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.19 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.26 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.26 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.26 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10109252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300004633\|Ga0066395_10776399	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300005332\|Ga0066388_101639595	Not Available	1134	Open in IMG/M
3300005332\|Ga0066388_105967609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300005332\|Ga0066388_106717667	Not Available	579	Open in IMG/M
3300005363\|Ga0008090_15834739	Not Available	509	Open in IMG/M
3300005536\|Ga0070697_100066765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2941	Open in IMG/M
3300005713\|Ga0066905_101191254	Not Available	680	Open in IMG/M
3300005764\|Ga0066903_101478126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1281	Open in IMG/M
3300005764\|Ga0066903_101566968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1247	Open in IMG/M
3300005764\|Ga0066903_104225383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300006175\|Ga0070712_100430111	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300009792\|Ga0126374_10455551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300010043\|Ga0126380_10690795	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300010043\|Ga0126380_11027477	Not Available	696	Open in IMG/M
3300010046\|Ga0126384_11513285	Not Available	629	Open in IMG/M
3300010046\|Ga0126384_11655411	Not Available	604	Open in IMG/M
3300010046\|Ga0126384_11738748	Not Available	591	Open in IMG/M
3300010046\|Ga0126384_12118686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300010047\|Ga0126382_12047999	Not Available	546	Open in IMG/M
3300010359\|Ga0126376_13038131	Not Available	519	Open in IMG/M
3300010361\|Ga0126378_10863909	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300010361\|Ga0126378_11653510	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300010362\|Ga0126377_10839362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	979	Open in IMG/M
3300011270\|Ga0137391_10626707	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012199\|Ga0137383_10148078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1718	Open in IMG/M
3300012205\|Ga0137362_11659701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300012211\|Ga0137377_10059129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3562	Open in IMG/M
3300012971\|Ga0126369_10993046	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300016270\|Ga0182036_10174440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1553	Open in IMG/M
3300016270\|Ga0182036_10718885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300016294\|Ga0182041_10354422	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1234	Open in IMG/M
3300016294\|Ga0182041_10465400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
3300016294\|Ga0182041_11258304	Not Available	676	Open in IMG/M
3300016341\|Ga0182035_10315302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1288	Open in IMG/M
3300016357\|Ga0182032_11590159	Not Available	569	Open in IMG/M
3300016371\|Ga0182034_10195423	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300016371\|Ga0182034_10606649	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300016371\|Ga0182034_11180598	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300016371\|Ga0182034_11841120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300016387\|Ga0182040_10914878	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300016404\|Ga0182037_10315517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1262	Open in IMG/M
3300016404\|Ga0182037_10482600	Not Available	1036	Open in IMG/M
3300016422\|Ga0182039_10686770	Not Available	902	Open in IMG/M
3300016445\|Ga0182038_11605114	Not Available	585	Open in IMG/M
3300016445\|Ga0182038_11738221	Not Available	562	Open in IMG/M
3300020579\|Ga0210407_10341182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1172	Open in IMG/M
3300021560\|Ga0126371_10857352	Not Available	1053	Open in IMG/M
3300021560\|Ga0126371_10896725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300025910\|Ga0207684_10234248	All Organisms → cellular organisms → Bacteria → Proteobacteria	1584	Open in IMG/M
3300026304\|Ga0209240_1219318	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300031543\|Ga0318516_10870729	Not Available	507	Open in IMG/M
3300031545\|Ga0318541_10431731	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031564\|Ga0318573_10013840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3490	Open in IMG/M
3300031564\|Ga0318573_10488032	Not Available	663	Open in IMG/M
3300031572\|Ga0318515_10363653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300031573\|Ga0310915_10322324	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300031573\|Ga0310915_10968603	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031668\|Ga0318542_10387374	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031668\|Ga0318542_10549781	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031681\|Ga0318572_10306197	Not Available	939	Open in IMG/M
3300031719\|Ga0306917_10621543	Not Available	849	Open in IMG/M
3300031719\|Ga0306917_10677278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300031719\|Ga0306917_11015344	Not Available	647	Open in IMG/M
3300031723\|Ga0318493_10506237	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300031748\|Ga0318492_10603887	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300031751\|Ga0318494_10044247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2332	Open in IMG/M
3300031768\|Ga0318509_10062174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1937	Open in IMG/M
3300031768\|Ga0318509_10366295	Not Available	806	Open in IMG/M
3300031778\|Ga0318498_10065553	All Organisms → cellular organisms → Bacteria → Proteobacteria	1626	Open in IMG/M
3300031778\|Ga0318498_10293724	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031779\|Ga0318566_10187587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300031793\|Ga0318548_10238690	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300031795\|Ga0318557_10195964	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300031796\|Ga0318576_10463252	Not Available	598	Open in IMG/M
3300031797\|Ga0318550_10281195	Not Available	807	Open in IMG/M
3300031797\|Ga0318550_10639256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300031821\|Ga0318567_10632802	Not Available	607	Open in IMG/M
3300031833\|Ga0310917_10191032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1366	Open in IMG/M
3300031833\|Ga0310917_10213876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1291	Open in IMG/M
3300031833\|Ga0310917_10719743	Not Available	675	Open in IMG/M
3300031833\|Ga0310917_11141626	Not Available	519	Open in IMG/M
3300031859\|Ga0318527_10141064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1007	Open in IMG/M
3300031879\|Ga0306919_10106285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1984	Open in IMG/M
3300031890\|Ga0306925_10480866	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300031890\|Ga0306925_11049951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300031890\|Ga0306925_11050942	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300031890\|Ga0306925_11338899	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300031893\|Ga0318536_10596948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300031910\|Ga0306923_10403901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1554	Open in IMG/M
3300031912\|Ga0306921_11478607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	743	Open in IMG/M
3300031912\|Ga0306921_12555805	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031941\|Ga0310912_11445412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031942\|Ga0310916_11483217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031945\|Ga0310913_10958777	Not Available	600	Open in IMG/M
3300031945\|Ga0310913_11058287	Not Available	567	Open in IMG/M
3300031946\|Ga0310910_10378432	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300031946\|Ga0310910_10659193	Not Available	828	Open in IMG/M
3300031946\|Ga0310910_10953840	Not Available	671	Open in IMG/M
3300032001\|Ga0306922_10840238	Not Available	957	Open in IMG/M
3300032010\|Ga0318569_10551970	Not Available	536	Open in IMG/M
3300032025\|Ga0318507_10085146	Not Available	1301	Open in IMG/M
3300032035\|Ga0310911_10149688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1312	Open in IMG/M
3300032039\|Ga0318559_10460121	Not Available	594	Open in IMG/M
3300032041\|Ga0318549_10073783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1452	Open in IMG/M
3300032042\|Ga0318545_10054511	Not Available	1357	Open in IMG/M
3300032044\|Ga0318558_10188610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1003	Open in IMG/M
3300032044\|Ga0318558_10434226	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300032044\|Ga0318558_10640203	Not Available	531	Open in IMG/M
3300032059\|Ga0318533_10471624	Not Available	919	Open in IMG/M
3300032063\|Ga0318504_10175865	Not Available	993	Open in IMG/M
3300032064\|Ga0318510_10250836	Not Available	727	Open in IMG/M
3300032064\|Ga0318510_10378033	Not Available	600	Open in IMG/M
3300032066\|Ga0318514_10207710	Not Available	1026	Open in IMG/M
3300032076\|Ga0306924_10319610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1780	Open in IMG/M
3300032261\|Ga0306920_101446629	Not Available	983	Open in IMG/M
3300033289\|Ga0310914_11050531	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.60%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101092521	3300000793	Forest Soil	ATRTVGPGEVRRSSAMRCLPAISLDPMKFLQALRPAEFADAACAPVPE*
Ga0066395_107763993	3300004633	Tropical Forest Soil	MRHLLAISLDPMRFLQAFAAGLRAEFADAACAPVPEYLAALM
Ga0066388_1016395952	3300005332	Tropical Forest Soil	MGMRRMPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYL
Ga0066388_1059676092	3300005332	Tropical Forest Soil	MRHLLAISLDPMRFLQAFAAGLRAEFADAACAPVPEYLAALMQQLDGGP*
Ga0066388_1067176671	3300005332	Tropical Forest Soil	MQMRHLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALM
Ga0008090_158347392	3300005363	Tropical Rainforest Soil	MRRLPAISLDPMKFVQAFAAGLRAEFADAACAPVPEYLAALMRE
Ga0070697_1000667651	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GEVRRSVGMRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPE*
Ga0066905_1011912541	3300005713	Tropical Forest Soil	MGMRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLA
Ga0066903_1014781261	3300005764	Tropical Forest Soil	MRSLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDGD
Ga0066903_1015669681	3300005764	Tropical Forest Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLD
Ga0066903_1042253832	3300005764	Tropical Forest Soil	MRHLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAA
Ga0070712_1004301111	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPE*
Ga0126374_104555511	3300009792	Tropical Forest Soil	MGMRRLPISLDPMKFLQAFAAGLRAEFADAACAPVPDYLAALMRQLDGDR
Ga0126380_106907952	3300010043	Tropical Forest Soil	MRRLPAISLDPMQFLQAFAAGLRAEFADAACAPVPEYLAA
Ga0126380_110274771	3300010043	Tropical Forest Soil	MGMRRLPISLDPMKFLQAFAAGLRAEFAEAAWAPVPEYLAALMRQL
Ga0126384_115132852	3300010046	Tropical Forest Soil	MRRLPAISLDPMKFVQAFAAGLRAEFADAACAPVPEYLAALMREL
Ga0126384_116554111	3300010046	Tropical Forest Soil	VSEQNRLPVISFDPMKFVQVFAAGLRAEFADAARAPLPEYSAALMRELED
Ga0126384_117387482	3300010046	Tropical Forest Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDGDR
Ga0126384_121186861	3300010046	Tropical Forest Soil	MPAISLNPMKFLQAFAAGLRAEFADAACAPVPEYLAAL
Ga0126382_120479993	3300010047	Tropical Forest Soil	MGMRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYL
Ga0126376_130381312	3300010359	Tropical Forest Soil	MGMRRLPAISLGPMKFAAGLRAEFADAACTPVREFLAALMR*
Ga0126378_108639091	3300010361	Tropical Forest Soil	MRCLPAISLDPMKLLQAFAAGLQAEFADAACAPVPE*
Ga0126378_116535101	3300010361	Tropical Forest Soil	MGMRRLPVISLDPMKFAAGLRAEFADAACTPVREYL
Ga0126377_108393621	3300010362	Tropical Forest Soil	MRRLPTILLDPMKFVQAFGAGLRAEFADAACAPVPEYL
Ga0137391_106267071	3300011270	Vadose Zone Soil	MRCLPAISLDPMKFLQAFAAGLQAEFADAACAPVPEYLAALMRQLDGD
Ga0137383_101480784	3300012199	Vadose Zone Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPMPEYLVALMQQLDGD
Ga0137362_116597011	3300012205	Vadose Zone Soil	MRCLPAISLDPMKFLQAFAAGLQAEFADAACAPVPEYLAALMRQL
Ga0137377_100591294	3300012211	Vadose Zone Soil	MRCLPAISLDPMKFLQAFAAGLQAEFADAACAPVPE*
Ga0126369_109930462	3300012971	Tropical Forest Soil	MRRLPAVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLAAL
Ga0182036_101744401	3300016270	Soil	MRRLPAISLDAMKFVQAFAAGLCAEFADAACAPVPEYLAALM
Ga0182036_107188852	3300016270	Soil	MRRLPVISLDPMKFVQAFAAGLRAEFADAARAPLPEYLAALMREL
Ga0182041_103544221	3300016294	Soil	MRRLPAVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLVALMRQLDGN
Ga0182041_104654002	3300016294	Soil	LPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDG
Ga0182041_112583042	3300016294	Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQ
Ga0182035_103153023	3300016341	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDG
Ga0182032_115901592	3300016357	Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPE
Ga0182034_101954231	3300016371	Soil	MRHLPAISLDPMKFLQAFAAGLRAEFADAACAPVPDYL
Ga0182034_106066492	3300016371	Soil	MRRVPVISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAAL
Ga0182034_111805981	3300016371	Soil	VRHLPAISLDLMKFLQVFAAGLRAEFADAACAPVPEYLAALMRQLDGD
Ga0182034_118411201	3300016371	Soil	MRRLPVISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLD
Ga0182040_109148781	3300016387	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQL
Ga0182037_103155173	3300016404	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAAL
Ga0182037_104826001	3300016404	Soil	MRRLPAISLDAMKFVQAFAAGLCAEFADAACAPVPEYLAALMRQLD
Ga0182039_106867701	3300016422	Soil	MRRLPAISLDAMKFVQAFAAGLCAEFADAACAPVPEYLAALMRQ
Ga0182038_116051142	3300016445	Soil	MRSLPAISLDPMTFLQAFAVGVRAEFADAACAPVPEYLAALMRQLDGDR
Ga0182038_117382212	3300016445	Soil	MRRLPAISLDPVKFLQAFAAGLRAEFADAACAPVPE
Ga0210407_103411821	3300020579	Soil	MCRLPIISLDPMKFVQTFAAGLRAEFADAASAPHS
Ga0126371_108573521	3300021560	Tropical Forest Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYVAALMQQLDGGP
Ga0126371_108967252	3300021560	Tropical Forest Soil	MRHLLAISLDPMRFLQAFAAGLRAEFADAACAPVPEYLAALMQQLDGGP
Ga0207684_102342482	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPE
Ga0209240_12193181	3300026304	Grasslands Soil	MRCLPAISLDPMKFLQAFAAGLQAEFADAACAPVS
Ga0318516_108707291	3300031543	Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLAA
Ga0318541_104317311	3300031545	Soil	MRRLPAISLDPIKFLQTFAAGLRAEFADAACAPVPEYLAALMRQ
Ga0318573_100138404	3300031564	Soil	MRRLPAISLDSMEFLQAFAAGLRAEFADAACAPVPEYLAALM
Ga0318573_104880321	3300031564	Soil	MRRLPAISLDPMKFLQAFAGGLRAEFADAACAPVPE
Ga0318515_103636531	3300031572	Soil	MRRLPAISLDSMKFVQAFAAGLRAEFVDAACAPVPEYLAALMRQL
Ga0310915_103223241	3300031573	Soil	MRRVPVISLDPMKFLQAFAAGLRAEFADAACAPVPE
Ga0310915_109686032	3300031573	Soil	MRHLPAISLDPMKFLQAFAAGLRAEFADAACAPVP
Ga0318542_103873742	3300031668	Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLA
Ga0318542_105497812	3300031668	Soil	MRRLPAISLDPMKFLQAFAAGLRAESADAVCTPVPEYLAALM
Ga0318572_103061973	3300031681	Soil	MRRLPAISLDPMKFVQAFAAGLRAAFADAACAPVPEY
Ga0306917_106215431	3300031719	Soil	MRSLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDG
Ga0306917_106772782	3300031719	Soil	MRRLPVISLDPMKFVQAFAAGLRAEFADAARAPLPEYLAAL
Ga0306917_110153441	3300031719	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPIPEYL
Ga0318493_105062372	3300031723	Soil	MRRLPAISLDPMTFLQAFAAGLRAEFADAACAPIPEYLAALMRQL
Ga0318492_106038873	3300031748	Soil	MRRVPVISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALM
Ga0318494_100442471	3300031751	Soil	MGMRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVP
Ga0318509_100621743	3300031768	Soil	MRRLPVISLDPMKFLQAFAAGLRAEFADAACAPVPEY
Ga0318509_103662952	3300031768	Soil	MGMRRLPAISLDPMTFLQAFAAGLRAEFADAACAPVPE
Ga0318498_100655533	3300031778	Soil	MRRLPVISLDPMKFLQAFAAGLRAEFADAACAPVPE
Ga0318498_102937242	3300031778	Soil	MRRLPVISLDPMEFLQAFTAGLRAEFADAACAPVPEYLAA
Ga0318566_101875873	3300031779	Soil	MGMRHLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQL
Ga0318548_102386901	3300031793	Soil	MRRLPVISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDGDRT
Ga0318557_101959641	3300031795	Soil	MRRLPAISLDPMKFLQAFAAGLRAESADAVCTPVPEY
Ga0318576_104632521	3300031796	Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDG
Ga0318550_102811951	3300031797	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACSPVPEY
Ga0318550_106392562	3300031797	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPLPEYLVALMQQLD
Ga0318567_106328022	3300031821	Soil	MGMRRLPAISLDPMTFLQAFAAGLRAEFADAACAPVPEYLSALMRQLDGD
Ga0310917_101910323	3300031833	Soil	MRRLPAISLDPMTFLQAFAAGLRAEFADAACAPIPE
Ga0310917_102138763	3300031833	Soil	LPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDGD
Ga0310917_107197431	3300031833	Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLD
Ga0310917_111416261	3300031833	Soil	MRRLPVISLDPMKFAAGLRAEFADAACTPVREYLAALMRQLEGGP
Ga0318527_101410643	3300031859	Soil	MGMRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDGD
Ga0306919_101062853	3300031879	Soil	MRRLPAISLDPMKLLQAFAAGLRAEFADAACAPVPEYL
Ga0306925_104808664	3300031890	Soil	MRRVPVISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQ
Ga0306925_110499511	3300031890	Soil	MRRPPVISLDPMKFVQAFAAGLRAEFADAARAPLPEYLAALMREL
Ga0306925_110509422	3300031890	Soil	MRCLPAISLDPMKFLQAFAARLQAEFADAACAPVPEYLAALMRQLDG
Ga0306925_113388992	3300031890	Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDGD
Ga0318536_105969481	3300031893	Soil	MRRLPAISLDSMKFVQAFAAGLRAEFVDAACAPVPE
Ga0306923_104039013	3300031910	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQLDGD
Ga0306921_114786071	3300031912	Soil	MRRLPISLDPMKFLQAFAAGLRAEFADAGCAPVPEYL
Ga0306921_125558052	3300031912	Soil	MRRLPAISLDPMKFLQAFAAGLRAELADAACAPVPEYLAALMRQLDG
Ga0310912_114454121	3300031941	Soil	MRRVPVISLDPMKFLQAFAAGLRAEFADAASAPVPEY
Ga0310916_114832171	3300031942	Soil	MGMRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAAL
Ga0310913_109587771	3300031945	Soil	MRHLPAISLDPMKFLQAFAAGLRAEFADAACAPVPDYLAVLMRQLD
Ga0310913_110582871	3300031945	Soil	MRSLPAISLDPMTFLQAFAVGVRAEFADAACAPVPEYLAALMR
Ga0310910_103784321	3300031946	Soil	MRRVPVISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRQL
Ga0310910_106591931	3300031946	Soil	MRSLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYL
Ga0310910_109538402	3300031946	Soil	MRRLPVVSLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALM
Ga0306922_108402382	3300032001	Soil	MRSLPAISLDPMKFLQAFAAGLRAEFADAACAPIPEYLAALMRQLDGDRTE
Ga0318569_105519703	3300032010	Soil	MRRLPAISLDPMKFVQTFAAGLRAAFADAACAPVP
Ga0318507_100851462	3300032025	Soil	MRRLPVISLDPMEFLQAFTAGLRAEFADAACAPVPEYLA
Ga0310911_101496882	3300032035	Soil	MRRLPAISLDPMKFLQAFAAGVRAEFADAACAPVP
Ga0318559_104601211	3300032039	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVP
Ga0318549_100737833	3300032041	Soil	MRRLPAISLDAMKFVQAFAAGLCAEFADAACAPVPEYL
Ga0318545_100545112	3300032042	Soil	MRRLPVISLDPMEFLQAFTAGLRAEFADAACAPVPEYLAALMRQLDGD
Ga0318558_101886101	3300032044	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMRHGDHN
Ga0318558_104342261	3300032044	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMR
Ga0318558_106402032	3300032044	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADACAPVPEYLAALMGQLD
Ga0318533_104716242	3300032059	Soil	MRRLPAISLDPMKFLQAFAGGLRAEFADAACAPVPEYLAALMR
Ga0318504_101758653	3300032063	Soil	MRRLPAISLDPMKFVQAFAAGLRAAFADAACAPVPEYLAALMRQLD
Ga0318510_102508361	3300032064	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADACAPVPEYLAALM
Ga0318510_103780331	3300032064	Soil	MGMRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAALMR
Ga0318514_102077102	3300032066	Soil	MRSLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLALMRQ
Ga0306924_103196103	3300032076	Soil	MRRLPVISLDPMKFLQAFAAGLRAEFADAACAPVPEYLAAL
Ga0306920_1014466293	3300032261	Soil	MRRLPAISLDPMKFLQAFAAGLRAEFADAACAPVPEYLA
Ga0310914_110505311	3300033289	Soil	MRRLPAISLDPMKFLRAFAAGLRAEFADAACAPVPKYLAALMRELDGDQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077597

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences