Metagenome / Metatranscriptome Family F077493

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077493
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	77 residues
Representative Sequence	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Number of Associated Samples	95
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.50 %
% of genes near scaffold ends (potentially truncated)	34.19 %
% of genes from short scaffolds (< 2000 bps)	80.34 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.744 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (19.658 % of family members)
Environment Ontology (ENVO)	Unclassified (39.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.085 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.16% β-sheet: 17.48% Coil/Unstructured: 54.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.41.5.0: automated matches	d5mpoc_	5mpo	0.6829
d.41.5.1: Molybdopterin synthase subunit MoaE	d1fm0e_	1fm0	0.66781
d.41.5.0: automated matches	d2wp4a_	2wp4	0.63827
d.41.5.0: automated matches	d2q5we1	2q5w	0.63374
d.41.5.0: automated matches	d6jc0b_	6jc0	0.63122

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13472	Lipase_GDSL_2	21.37
PF00005	ABC_tran	15.38
PF01522	Polysacc_deac_1	2.56
PF08240	ADH_N	2.56
PF13732	DUF4162	2.56
PF13564	DoxX_2	1.71
PF13709	DUF4159	1.71
PF00107	ADH_zinc_N	1.71
PF00903	Glyoxalase	1.71
PF02585	PIG-L	0.85
PF13280	WYL	0.85
PF02016	Peptidase_S66	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	2.56
COG1619	Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)	Cell wall/membrane/envelope biogenesis [M]	0.85
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.74 %
Unclassified	root	N/A	10.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.74 %
Unclassified	root	N/A	10.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.74 %
Unclassified	root	N/A	10.26 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.28 %
Unclassified	root	N/A	10.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	51.28 %
Unclassified	root	N/A	10.26 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.28 %
Unclassified	root	N/A	10.26 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.28 %
Unclassified	root	N/A	10.26 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.28 %
Unclassified	root	N/A	10.26 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.28 %
Unclassified	root	N/A	10.26 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.28 %
Unclassified	root	N/A	10.26 %
Streptomyces longwoodensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	6.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100687171	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300000956\|JGI10216J12902_108298729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300003324\|soilH2_10337921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1300	Open in IMG/M
3300004114\|Ga0062593_102476857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	587	Open in IMG/M
3300004157\|Ga0062590_102858504	Not Available	516	Open in IMG/M
3300004480\|Ga0062592_101735681	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300004480\|Ga0062592_101753340	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300004480\|Ga0062592_102133165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005174\|Ga0066680_10089747	Not Available	1865	Open in IMG/M
3300005330\|Ga0070690_100066082	All Organisms → cellular organisms → Bacteria	2340	Open in IMG/M
3300005341\|Ga0070691_10720292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	601	Open in IMG/M
3300005353\|Ga0070669_100541510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300005355\|Ga0070671_100666186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300005355\|Ga0070671_101631301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005406\|Ga0070703_10063629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300005444\|Ga0070694_100456931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300005445\|Ga0070708_100007515	All Organisms → cellular organisms → Bacteria	8726	Open in IMG/M
3300005455\|Ga0070663_100932393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	752	Open in IMG/M
3300005457\|Ga0070662_101920387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005467\|Ga0070706_100262320	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300005467\|Ga0070706_100352940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1371	Open in IMG/M
3300005468\|Ga0070707_100214764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1874	Open in IMG/M
3300005468\|Ga0070707_102027134	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005471\|Ga0070698_100672966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300005518\|Ga0070699_101948779	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005536\|Ga0070697_100750913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300005547\|Ga0070693_100081376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1931	Open in IMG/M
3300005555\|Ga0066692_10060334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2141	Open in IMG/M
3300005556\|Ga0066707_10493938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300005569\|Ga0066705_10225150	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300005598\|Ga0066706_10135859	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300005618\|Ga0068864_100755455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300005719\|Ga0068861_101752869	Not Available	615	Open in IMG/M
3300005764\|Ga0066903_107214820	Not Available	575	Open in IMG/M
3300005844\|Ga0068862_100076428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2898	Open in IMG/M
3300005844\|Ga0068862_100123931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2280	Open in IMG/M
3300006038\|Ga0075365_10058687	All Organisms → cellular organisms → Bacteria	2562	Open in IMG/M
3300006051\|Ga0075364_10913316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300006186\|Ga0075369_10565306	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006237\|Ga0097621_101601755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300006353\|Ga0075370_10899393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300006573\|Ga0074055_11200091	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300006581\|Ga0074048_11851130	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006845\|Ga0075421_100000294	All Organisms → cellular organisms → Bacteria	49609	Open in IMG/M
3300006845\|Ga0075421_100184269	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300006845\|Ga0075421_100766616	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300006845\|Ga0075421_101119139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300006852\|Ga0075433_10104114	Not Available	2514	Open in IMG/M
3300006852\|Ga0075433_11450327	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006854\|Ga0075425_100111471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3119	Open in IMG/M
3300006854\|Ga0075425_101224377	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300006903\|Ga0075426_11421119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300006904\|Ga0075424_101891213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300006914\|Ga0075436_100521518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300006914\|Ga0075436_101258805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300006914\|Ga0075436_101511348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009038\|Ga0099829_11296845	Not Available	602	Open in IMG/M
3300009088\|Ga0099830_11240438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300009089\|Ga0099828_11123129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300009089\|Ga0099828_11920784	Not Available	519	Open in IMG/M
3300009090\|Ga0099827_10071245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2684	Open in IMG/M
3300009100\|Ga0075418_12887341	Not Available	524	Open in IMG/M
3300009147\|Ga0114129_10127586	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300009162\|Ga0075423_10225824	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300009162\|Ga0075423_10231509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1936	Open in IMG/M
3300010399\|Ga0134127_11381429	Not Available	775	Open in IMG/M
3300010401\|Ga0134121_10022517	All Organisms → cellular organisms → Bacteria	5051	Open in IMG/M
3300010403\|Ga0134123_12200209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012198\|Ga0137364_11132310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012202\|Ga0137363_10826300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300012204\|Ga0137374_10060173	All Organisms → cellular organisms → Bacteria	3821	Open in IMG/M
3300012353\|Ga0137367_10749295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300012360\|Ga0137375_10027968	All Organisms → cellular organisms → Bacteria	6440	Open in IMG/M
3300012532\|Ga0137373_10951583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300012685\|Ga0137397_10096699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2161	Open in IMG/M
3300012922\|Ga0137394_11184900	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012930\|Ga0137407_11543832	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300014325\|Ga0163163_12057077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300014969\|Ga0157376_12749331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300015241\|Ga0137418_11254520	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300017792\|Ga0163161_10967830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300018083\|Ga0184628_10080148	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300021082\|Ga0210380_10498887	Not Available	558	Open in IMG/M
3300022756\|Ga0222622_10062458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2157	Open in IMG/M
3300025899\|Ga0207642_10030886	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300025908\|Ga0207643_10394531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	874	Open in IMG/M
3300025910\|Ga0207684_10278055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1444	Open in IMG/M
3300025910\|Ga0207684_11647995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300025921\|Ga0207652_11067314	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300025922\|Ga0207646_10072355	All Organisms → cellular organisms → Bacteria	3079	Open in IMG/M
3300025927\|Ga0207687_10417141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	1107	Open in IMG/M
3300025931\|Ga0207644_10515754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300025933\|Ga0207706_10295602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	1411	Open in IMG/M
3300025941\|Ga0207711_11261710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	681	Open in IMG/M
3300025986\|Ga0207658_11007152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300026118\|Ga0207675_101532080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300026304\|Ga0209240_1008184	All Organisms → cellular organisms → Bacteria	3946	Open in IMG/M
3300026319\|Ga0209647_1009584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6602	Open in IMG/M
3300026328\|Ga0209802_1182805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300027880\|Ga0209481_10480201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300027882\|Ga0209590_10106142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1686	Open in IMG/M
3300027909\|Ga0209382_10000404	All Organisms → cellular organisms → Bacteria	71120	Open in IMG/M
3300027909\|Ga0209382_10431104	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300027909\|Ga0209382_10510056	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300027909\|Ga0209382_10971226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300027909\|Ga0209382_11555900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300028380\|Ga0268265_10046831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3235	Open in IMG/M
3300028802\|Ga0307503_10303140	Not Available	802	Open in IMG/M
3300028819\|Ga0307296_10409679	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300028819\|Ga0307296_10745112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300028885\|Ga0307304_10454485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300031170\|Ga0307498_10356311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300031226\|Ga0307497_10374942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces longwoodensis	673	Open in IMG/M
3300031226\|Ga0307497_10743684	Not Available	510	Open in IMG/M
3300031740\|Ga0307468_101959524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300031847\|Ga0310907_10693949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300031943\|Ga0310885_10167154	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.12%
Host-Associated	Host-Associated	41.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.56%
Plants	Host-Associated → Plants	41.88%
Aquatic	Environmental → Aquatic	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.69%
Roots	Host-Associated → Plants → Roots	5.13%
Sediment	Environmental → Aquatic → Sediment	1.71%
Freshwater	Environmental → Aquatic → Freshwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.22%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.84%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.13%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	19.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.27%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1006871711	3300000955	Soil	DTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDDELVVAIRRALSTAEHH*
JGI10216J12902_1082987292	3300000956	Soil	VTHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELVEAIRRALSTAEHE*
soilH2_103379212	3300003324	Sugarcane Root And Bulk Soil	LETVITIDETVPTSIRPSVQGLVARLLGAYPHVRRVHVSFGESWIVTAWDGMGTAVVDRELIEAIRRALATAEHH*
Ga0062593_1024768571	3300004114	Soil	RVVRRDPWGGPSAPREMVVPDITVDDTVPVSVRPNVHGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0062590_1028585041	3300004157	Soil	MPDITVDDTVPISIRPSIHGLVARLLPAYPHVRRVHVAFDDSWIATAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0062592_1017356812	3300004480	Soil	VPHEITVDDTVPTSIRPSVHGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDDELLVAIQRALSTAEHE*
Ga0062592_1017533401	3300004480	Soil	VSHDITVDDTVPVSIRPSVKGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0062592_1021331652	3300004480	Soil	MPDITVDDTVPISIRPSIHGLVARLLPAYPHVRRVHVAFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0066680_100897471	3300005174	Soil	QGQGASLAVDHEITIDPTVPVSIRPAIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALATADDH*
Ga0070690_1000660823	3300005330	Switchgrass Rhizosphere	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0070691_107202922	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	IDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0070669_1005415102	3300005353	Switchgrass Rhizosphere	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDAELVQAIR
Ga0070671_1006661862	3300005355	Switchgrass Rhizosphere	VPDITVDDTVPVSVRPNVHGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRRALSTAEHH*
Ga0070671_1016313011	3300005355	Switchgrass Rhizosphere	VPDITVDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDEELVVAIRRALSTAEHH*
Ga0070703_100636292	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	LTAGVPSRQGRHFVPHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE*
Ga0070694_1004569312	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRRALSTAE
Ga0070708_10000751512	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	HFVPHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE*
Ga0070663_1009323932	3300005455	Corn Rhizosphere	AENVVPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0070662_1019203872	3300005457	Corn Rhizosphere	VAQDITIDDTVPISIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRA
Ga0070706_1002623202	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VQHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE*
Ga0070706_1003529402	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAGAQGQGASLAVDHEITIDPTVPASIRPAIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALATADDH*
Ga0070707_1002147642	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE*
Ga0070707_1020271341	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DHEITIDPTVPASVRPAIEGLIARLLPTYPHVRKVHIALDDRSWIVTAWDGTGTAVVDRELIEAILRALSTAENH*
Ga0070698_1006729662	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LTAGVPSRQGRHFVQHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE*
Ga0070699_1019487792	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VAHDITIDDTVPASVRPSIQGLVARLLPAYPHVRRVHVSFDNSWIVTAWDGMGTAVVDDELLEAIRRALSTAEHH*
Ga0070697_1007509132	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAGAQGQGASLAVDHEITIDPTVPVSIRPAIEGLVARLLPTYPHVRKVHIALDDRSWIVTAWDGTGTAVVDRELIEAILRALSTAENH*
Ga0070693_1000813763	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIR
Ga0066692_100603342	3300005555	Soil	MRRLAGAQGQGASLAVDHEITIDPTVPVSIRPAIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALATADDH*
Ga0066707_104939381	3300005556	Soil	MTAGVTVDDTVPTSIRPSVQGLVARLLPAYPHVRRVHVSFDERWIVTAWDGKGTAVVDPELIEAIR
Ga0066705_102251504	3300005569	Soil	RPEVGCTVLPAVENQVTVDDTVPASVRPAVQGLVARLLSAYPHVRRVHVAFDERSWIVTAWDGTGTAVVDRELIEAIQRALATAESH*
Ga0066706_101358595	3300005598	Soil	VENQVTVDDTVPASVRPAVQGLVARLLSAYPHVRRVHVAFDERSWIVTAWDGTGTAVVDRELIEAIQRALATAESH*
Ga0068864_1007554552	3300005618	Switchgrass Rhizosphere	VPDITVDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVVAIRRALSTAEHH*
Ga0068861_1017528692	3300005719	Switchgrass Rhizosphere	VPDITIDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRRALSTAEHH*
Ga0066903_1072148202	3300005764	Tropical Forest Soil	MLRRSTGPHDREVAAQGQGASLAVDHEITIDPTVPVSIRPSIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALSTAEDR*
Ga0068862_1000764284	3300005844	Switchgrass Rhizosphere	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRA
Ga0068862_1001239312	3300005844	Switchgrass Rhizosphere	VAQDITIDDTVPISIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0075365_100586872	3300006038	Populus Endosphere	VAQDITIDDTVPVSIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0075364_109133162	3300006051	Populus Endosphere	MPDITVDDTVPVSIRPSIQGLVARLLPAYPHVRRVHVAFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0075369_105653062	3300006186	Populus Endosphere	IRPSVKGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0097621_1016017551	3300006237	Miscanthus Rhizosphere	VPDITVDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVIAIRRALSTAEHH*
Ga0075370_108993931	3300006353	Populus Endosphere	VDHEITVDDTVPISVRPGIQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDHELIQAIRRALSTAEHH*
Ga0074055_112000911	3300006573	Soil	GSNVVAHDITIDDTVPVSVRPSVQGLVARLMPAYPHVRRVHVSFDNSWIVTAWDGMGTAVVDDELLEAIRRALSTAEHH*
Ga0074048_118511302	3300006581	Soil	VPDITVDDTVPVSVRPNIHGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDDELVVAIRRALSTAEHH*
Ga0075421_10000029416	3300006845	Populus Rhizosphere	VTREDLVPQDITVDDTVPASIRPSIHGLVARLLPAYPHVRRVHVSFGESWVVTAWDGMGTSVADDELLAAIRRALSTAEHH*
Ga0075421_1001842691	3300006845	Populus Rhizosphere	VPDITVDDTVPVSVRPSIQGLVARLLPAYPHVRRIHVSFDDSWIVTAWDGMGTSVVDDELIAAIRRALSTAEHH*
Ga0075421_1007666162	3300006845	Populus Rhizosphere	QVTLGVPSRQGTHFVTREITVDATVPTSIRPSVHGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDSELIVAIQRALSTAEHE*
Ga0075421_1011191392	3300006845	Populus Rhizosphere	MPDITVDDTVPVSIRPSIQGLVARLLPAYPHVRRVHVAFDDSWIVTAWDGMGTAVVDHELAAAIRRALSTAEHH*
Ga0075433_101041145	3300006852	Populus Rhizosphere	TVVRTSRRAPWGGTSAPQENVVAQDITIDDTVPISIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0075433_114503272	3300006852	Populus Rhizosphere	VPHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRRALSTAEHE*
Ga0075425_1001114713	3300006854	Populus Rhizosphere	VPDITIDDTVPISVRPNVQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRGALSTAEHH*
Ga0075425_1012243772	3300006854	Populus Rhizosphere	VPDITVDDTVPVSVRPNVHGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH*
Ga0075426_114211192	3300006903	Populus Rhizosphere	VPDITIDDTVPISVRPNVQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVA
Ga0075424_1018912132	3300006904	Populus Rhizosphere	VAQDITIDDTVPISIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRRALSTAEHH*
Ga0075436_1005215183	3300006914	Populus Rhizosphere	MPDITVDDTVPVSIRPSIQGLVARLLPAYPHVRRVHVAFDDSWIVTAWDGLGTAVVDHELVAAIRRALSSAEHH*
Ga0075436_1012588051	3300006914	Populus Rhizosphere	VPDITVDDTVPVSVRPNVHGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIR
Ga0075436_1015113482	3300006914	Populus Rhizosphere	VPDITIDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRGALSTAEHH*
Ga0099829_112968452	3300009038	Vadose Zone Soil	MTGAQGQRASLAVDHEITVDPTVPVSVRPGIEGLVARLLATYPHVRKVHIALDDRSWIVTAWDGTGTAVVDRELIEAIRRALSTAENH*
Ga0099830_112404382	3300009088	Vadose Zone Soil	VPHEITVDDTVPSSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHA*
Ga0099828_111231292	3300009089	Vadose Zone Soil	VPHEITVDDTVPSSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE*
Ga0099828_119207842	3300009089	Vadose Zone Soil	LAVDHEISIDPTVPASVRPTIEGLVARLLPTYPHVRKVHVALDDRSWVVTAWDGTGTAVVDRELIEAIRRALATADDH*
Ga0099827_100712452	3300009090	Vadose Zone Soil	LAVDHEISIDPTVPASVRPTIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALATADDH*
Ga0075418_128873412	3300009100	Populus Rhizosphere	LVTREDLVPQDITVDDTVPASIRPSIHGLVARLLPAYPHVRRVHVSFGESWVVTAWDGMGTSVADDELLAAIRRALSTAEHH*
Ga0114129_101275862	3300009147	Populus Rhizosphere	VAQDITIDDTVPASIRPSIQGLVARLLPAYPHVRRVHVSFGESWVVTAWDGMGTSVADDELLAAIRRALSTAEHH*
Ga0075423_102258242	3300009162	Populus Rhizosphere	VVPDITIDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRGALSTAEHH*
Ga0075423_102315092	3300009162	Populus Rhizosphere	VQHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRRALSTAEHE*
Ga0134127_113814293	3300010399	Terrestrial Soil	SRQDSGASLGGPSAPWEDVVPHEITVDETVPASIRPSVKGLVARLMPAYPHVRRVHVAFDDSWIVTAWDGLGTAVVDHELVAAIRRALSTAEHH*
Ga0134121_100225177	3300010401	Terrestrial Soil	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMETAVVDEELVVAIRRALSTAEHH*
Ga0134123_122002092	3300010403	Terrestrial Soil	VPHATTVDDTVPTSIRPSVQGLVARLMPAYPHVRKVHVAFDESWIVTAWDGTGTVVVDHGLVEAIRRALATAERD*
Ga0137364_111323101	3300012198	Vadose Zone Soil	LAVDHDISIDPTVPASVRPTIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALATADDH*
Ga0137363_108263002	3300012202	Vadose Zone Soil	MLRRMTGAQGQGASLAVDHEITVDPTVPVSIRPGIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALSTAEAH*
Ga0137374_100601733	3300012204	Vadose Zone Soil	LPHEITVDDTVPTSIRPSVQGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRRALSTAEHE*
Ga0137367_107492952	3300012353	Vadose Zone Soil	LVPHEITVDDTVPTSIRPSVQGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIQRALSTAEHEERAEKSPRKGSS
Ga0137375_100279688	3300012360	Vadose Zone Soil	VVPDITVDDTVPVSVRPSIQGLVARLLPAYPHVRRVHVSFDESWIVTAWDGRGTAVVDEELVAAIRQALSTAEHH*
Ga0137373_109515832	3300012532	Vadose Zone Soil	VPHEITVDDTVPSSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKA
Ga0137397_100966992	3300012685	Vadose Zone Soil	MPDITVDDTVPVSVRPSVQGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDEELVVAIRKALSTAEHH*
Ga0137394_111849001	3300012922	Vadose Zone Soil	RSRSIDRGCTVDSGSHFVPHEITIDDTVPTSIRPSVQGLVARLLPAYPHVRRVHVAFDESWIVTAWDGMGTAVVDAELIEAIQRALATAEHH*
Ga0137407_115438322	3300012930	Vadose Zone Soil	VPHQITVDDTVPTSIRPSVQGLVARLLPAYPHVRRVHVSFDESWIVTAWDGRGTAVVDRELIEAIRKALSTAEYE*
Ga0163163_120570771	3300014325	Switchgrass Rhizosphere	VVPDITVDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVVAIRRALSTAEHH*
Ga0157376_127493312	3300014969	Miscanthus Rhizosphere	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVVAIRRALSTAEHH*
Ga0137418_112545202	3300015241	Vadose Zone Soil	VPHEITVDDTVPTSIRPSIQGLVARLLPTYPHVRRVHVSFDESWIVTAWDGMGTAVVDAELIEAIKRALSTAEHH*
Ga0163161_109678302	3300017792	Switchgrass Rhizosphere	VPHDITIDETVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Ga0184628_100801483	3300018083	Groundwater Sediment	AGVDHEITVDDTVPVSVRPGIEGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDHELLQAIRRALSTAEHH
Ga0210380_104988871	3300021082	Groundwater Sediment	KEAGVDHEITVDDTVPVSVRPGIEGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDHELLQAIRRALSTAEHH
Ga0222622_100624583	3300022756	Groundwater Sediment	VPHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFAESWIVTAWDGMGTAVVDDELIVAIQRALSTAEHE
Ga0207642_100308862	3300025899	Miscanthus Rhizosphere	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Ga0207643_103945311	3300025908	Miscanthus Rhizosphere	WGRTLRAAENVVPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Ga0207684_102780552	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAGAQGQGASLAVDHEITIDPTVPASIRPAIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALATADDH
Ga0207684_116479951	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LTAGVPSRQGRHFVQHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE
Ga0207652_110673142	3300025921	Corn Rhizosphere	VPDITVDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Ga0207646_100723555	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE
Ga0207687_104171411	3300025927	Miscanthus Rhizosphere	ITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Ga0207644_105157542	3300025931	Switchgrass Rhizosphere	VPDITVDDTVPVSVRPNVHGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRRALSTAEHH
Ga0207706_102956023	3300025933	Corn Rhizosphere	VAQDITIDDTVPISIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Ga0207711_112617101	3300025941	Switchgrass Rhizosphere	AAENVVPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Ga0207658_110071522	3300025986	Switchgrass Rhizosphere	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAA
Ga0207675_1015320802	3300026118	Switchgrass Rhizosphere	VPDITIDDTVPVSVRPNIQGLVARLLPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDDELVAAIRRALSTAEHH
Ga0209240_10081846	3300026304	Grasslands Soil	VPHEITVDDTVPTSIRPSVQGLVARLLPAYPHVRRVHVSFDESWIVTAWDGKGTAVVDPELIEAIRKALSTAEHE
Ga0209647_10095849	3300026319	Grasslands Soil	VPHEITVDDSVPTSIRPSVQGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIDAIQRALSTAEHE
Ga0209802_11828051	3300026328	Soil	GQGASLAVDHEITIDPTVPVSIRPAIEGLVARLLPTYPHVRKVHVALDDRSWIVTAWDGTGTAVVDRELIEAIRRALATADDH
Ga0209481_104802012	3300027880	Populus Rhizosphere	VAQDITIDDTVPVSIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAI
Ga0209590_101061423	3300027882	Vadose Zone Soil	MLRRSTGAHGQGASLAVDHEISIDPTVPASVRPTIEGLVARLLPTYPHVRKVHVALDDRSWVVTAWDGTGTAVVDRELIEAIRRALATADDH
Ga0209382_1000040416	3300027909	Populus Rhizosphere	VTREDLVPQDITVDDTVPASIRPSIHGLVARLLPAYPHVRRVHVSFGESWVVTAWDGMGTSVADDELLAAIRRALSTAEHH
Ga0209382_104311042	3300027909	Populus Rhizosphere	VAQDITIDDTVPVSIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH
Ga0209382_105100562	3300027909	Populus Rhizosphere	VTLGVPSRQGTHFVTREITVDATVPTSIRPSVHGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDSELIVAIQRALSTAEHE
Ga0209382_109712262	3300027909	Populus Rhizosphere	MPDITVDDTVPVSIRPSIQGLVARLLPAYPHVRRVHVAFDDSWIVTAWDGMGTAVVDHELAAAIRRALSTAEHH
Ga0209382_115559002	3300027909	Populus Rhizosphere	VPDITVDDTVPVSVRPSIQGLVARLLPAYPHVRRIHVSFDDSWIVTAWDGMGTSVVDDELIAAIRRALSTAEHH
Ga0268265_100468314	3300028380	Switchgrass Rhizosphere	VAQDITIDDTVPISIRPSIQGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAA
Ga0307503_103031402	3300028802	Soil	VDHEITVDDTVPVSVRPGIEGLVARLMPAYPHVRRVHVSFDESWIVTAWDGLGTAVVDHELIQAIRRALSTAEHH
Ga0307296_104096791	3300028819	Soil	VDRGCTVEAGTHFVRHEITVDDTVPSSIRPSVHGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDRELIEAIRKALSTAEHE
Ga0307296_107451122	3300028819	Soil	VPHEITVDDTVPTSIRPSVQGLVARLMPAYPHVRRVHVSFAESWIVTAWDGMGTAVVDDELIVAIQRALS
Ga0307304_104544852	3300028885	Soil	VPNITVDDTVPVSVRPSVQGLVAQLLHAYPHVRRVHVSFDESWIVTAWDGLGTAVVDDELVAAIRRALSAAEHH
Ga0307498_103563112	3300031170	Soil	VPDITVDDTVPVSVRPNIHGLVARLLPAYPHVRRVHVSFDESWIVTAWDGMGTAVVDHELVEAIRRALSTAEHH
Ga0307497_103749421	3300031226	Soil	SIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVEAIRRALSTAEHH
Ga0307497_107436842	3300031226	Soil	PVSIRPSIQGLVARLMPAYPHVRRVHVSFDESWIVTAWDGMGTSVVDEELVAAIRRALSTAEHH
Ga0307468_1019595242	3300031740	Hardwood Forest Soil	VSFEITIDETVPASIRPSVHGLVARLGHAYPHIRRVQVSYDESWIVTAWDGSGAAVVDRELVEAIRRALAGAEYH
Ga0310907_106939492	3300031847	Soil	VPHDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTA
Ga0310885_101671542	3300031943	Soil	HDITIDDTVPVSIRPSIKGLVARLMPAYPHVRRVHVSFDDSWIVTAWDGMGTAVVDHELVAAIRRALSTAEHH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077493

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences