Metagenome Family F077489

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077489
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	48 residues
Representative Sequence	MTYYLLLSGDSEKDSIYETNVLGEESFETFYPSVGFMILNRIIN
Number of Associated Samples	101
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.89 %
% of genes near scaffold ends (potentially truncated)	91.45 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (45.299 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (43.590 % of family members)
Environment Ontology (ENVO)	Unclassified (89.744 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.744 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.22% β-sheet: 0.00% Coil/Unstructured: 77.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01370	Epimerase	14.53
PF00535	Glycos_transf_2	8.55
PF07883	Cupin_2	5.98
PF02562	PhoH	5.13
PF01048	PNP_UDP_1	4.27
PF00984	UDPG_MGDP_dh	2.56
PF02585	PIG-L	1.71
PF03721	UDPG_MGDP_dh_N	1.71
PF02719	Polysacc_synt_2	1.71
PF02709	Glyco_transf_7C	1.71
PF16363	GDP_Man_Dehyd	0.85
PF13640	2OG-FeII_Oxy_3	0.85
PF13661	2OG-FeII_Oxy_4	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	5.13
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	5.13
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	4.27
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	4.27
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	4.27
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	4.27
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	4.27
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	3.42
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	3.42
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	3.42
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.71
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.71
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.71
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	1.71
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.71
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	1.71
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.71
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
cellular organisms	root	All Organisms → cellular organisms	32.48 %
Viruses	superkingdom	All Organisms → Viruses	22.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	14.53 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.24 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	11.11 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	3.42 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.24 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	11.11 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.42 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.37 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	16.24 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	11.11 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.37 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	16.24 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	11.11 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.42 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.85 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.37 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	16.24 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	11.11 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.42 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.37 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	16.24 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	11.11 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.42 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000237\|SI34jun09_150mDRAFT_1030507	Not Available	580	Open in IMG/M
3300001589\|JGI24005J15628_10156402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	686	Open in IMG/M
3300001589\|JGI24005J15628_10177204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	619	Open in IMG/M
3300002484\|JGI25129J35166_1076190	Not Available	609	Open in IMG/M
3300004097\|Ga0055584_101698722	Not Available	652	Open in IMG/M
3300005430\|Ga0066849_10047609	All Organisms → Viruses → Predicted Viral	1729	Open in IMG/M
3300005605\|Ga0066850_10129286	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	939	Open in IMG/M
3300006090\|Ga0082015_1059719	Not Available	603	Open in IMG/M
3300006191\|Ga0075447_10119642	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	901	Open in IMG/M
3300006306\|Ga0068469_1251771	Not Available	506	Open in IMG/M
3300006309\|Ga0068479_1152938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	574	Open in IMG/M
3300006318\|Ga0068475_1416947	Not Available	680	Open in IMG/M
3300006325\|Ga0068501_1165213	Not Available	599	Open in IMG/M
3300006336\|Ga0068502_1870374	Not Available	606	Open in IMG/M
3300006565\|Ga0100228_1251108	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	802	Open in IMG/M
3300006750\|Ga0098058_1073301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	944	Open in IMG/M
3300006751\|Ga0098040_1190295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	601	Open in IMG/M
3300007276\|Ga0070747_1115826	Not Available	981	Open in IMG/M
3300007514\|Ga0105020_1289512	All Organisms → Viruses → Predicted Viral	1060	Open in IMG/M
3300008050\|Ga0098052_1063966	All Organisms → Viruses → Predicted Viral	1553	Open in IMG/M
3300008050\|Ga0098052_1169117	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	859	Open in IMG/M
3300008221\|Ga0114916_1127222	Not Available	590	Open in IMG/M
3300009193\|Ga0115551_1108076	All Organisms → Viruses → Predicted Viral	1300	Open in IMG/M
3300009409\|Ga0114993_10602409	All Organisms → Viruses → environmental samples → uncultured virus	808	Open in IMG/M
3300009497\|Ga0115569_10471502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	534	Open in IMG/M
3300009593\|Ga0115011_10193985	All Organisms → Viruses → Predicted Viral	1497	Open in IMG/M
3300009593\|Ga0115011_12102142	Not Available	518	Open in IMG/M
3300009703\|Ga0114933_10534106	Not Available	759	Open in IMG/M
3300009705\|Ga0115000_10016560	All Organisms → cellular organisms → Bacteria	5352	Open in IMG/M
3300009705\|Ga0115000_10430730	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	837	Open in IMG/M
3300009706\|Ga0115002_10730995	Not Available	696	Open in IMG/M
3300009785\|Ga0115001_10678454	Not Available	625	Open in IMG/M
3300009786\|Ga0114999_10465867	Not Available	981	Open in IMG/M
3300009790\|Ga0115012_10666190	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	831	Open in IMG/M
3300009790\|Ga0115012_11009176	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	688	Open in IMG/M
3300010150\|Ga0098056_1122159	Not Available	884	Open in IMG/M
3300010153\|Ga0098059_1015906	All Organisms → Viruses → Predicted Viral	3106	Open in IMG/M
3300010883\|Ga0133547_10188630	All Organisms → Viruses → Predicted Viral	4412	Open in IMG/M
3300012920\|Ga0160423_11221050	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	501	Open in IMG/M
3300012928\|Ga0163110_10803477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	740	Open in IMG/M
3300012928\|Ga0163110_11739893	Not Available	509	Open in IMG/M
3300017703\|Ga0181367_1051386	Not Available	726	Open in IMG/M
3300017705\|Ga0181372_1082874	Not Available	545	Open in IMG/M
3300017731\|Ga0181416_1126956	Not Available	613	Open in IMG/M
3300017731\|Ga0181416_1150900	Not Available	560	Open in IMG/M
3300017738\|Ga0181428_1150570	Not Available	544	Open in IMG/M
3300017744\|Ga0181397_1164712	Not Available	563	Open in IMG/M
3300017781\|Ga0181423_1131208	Not Available	971	Open in IMG/M
3300017783\|Ga0181379_1134932	Not Available	887	Open in IMG/M
3300020169\|Ga0206127_1197404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	733	Open in IMG/M
3300020333\|Ga0211661_1122516	Not Available	612	Open in IMG/M
3300020376\|Ga0211682_10020611	All Organisms → Viruses → Predicted Viral	2684	Open in IMG/M
3300020428\|Ga0211521_10027070	All Organisms → Viruses → Predicted Viral	3189	Open in IMG/M
3300020428\|Ga0211521_10484677	Not Available	532	Open in IMG/M
3300020435\|Ga0211639_10079924	All Organisms → Viruses → Predicted Viral	1397	Open in IMG/M
3300020441\|Ga0211695_10433265	Not Available	502	Open in IMG/M
3300020447\|Ga0211691_10166252	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	840	Open in IMG/M
3300020449\|Ga0211642_10067560	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1555	Open in IMG/M
3300020454\|Ga0211548_10180716	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300020463\|Ga0211676_10243124	All Organisms → Viruses → Predicted Viral	1059	Open in IMG/M
3300020470\|Ga0211543_10558029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	540	Open in IMG/M
3300020471\|Ga0211614_10189192	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	890	Open in IMG/M
3300020474\|Ga0211547_10206096	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1009	Open in IMG/M
3300020478\|Ga0211503_10656276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	541	Open in IMG/M
3300020478\|Ga0211503_10656781	Not Available	541	Open in IMG/M
3300020595\|Ga0206126_10129115	All Organisms → Viruses → Predicted Viral	1221	Open in IMG/M
3300021442\|Ga0206685_10255896	Not Available	593	Open in IMG/M
3300021959\|Ga0222716_10456835	Not Available	728	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10095631	All Organisms → Viruses → Predicted Viral	1571	Open in IMG/M
3300025072\|Ga0208920_1089402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	575	Open in IMG/M
3300025082\|Ga0208156_1038385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1001	Open in IMG/M
3300025086\|Ga0208157_1071071	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	887	Open in IMG/M
3300025096\|Ga0208011_1018753	All Organisms → Viruses → Predicted Viral	1801	Open in IMG/M
3300025102\|Ga0208666_1048102	All Organisms → Viruses → Predicted Viral	1205	Open in IMG/M
3300025109\|Ga0208553_1086826	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	735	Open in IMG/M
3300025122\|Ga0209434_1031201	Not Available	1742	Open in IMG/M
3300025125\|Ga0209644_1060878	Not Available	872	Open in IMG/M
3300025127\|Ga0209348_1225286	Not Available	510	Open in IMG/M
3300025133\|Ga0208299_1058071	All Organisms → Viruses → Predicted Viral	1441	Open in IMG/M
3300025830\|Ga0209832_1201831	Not Available	556	Open in IMG/M
3300025890\|Ga0209631_10361351	Not Available	683	Open in IMG/M
3300025892\|Ga0209630_10401546	Not Available	593	Open in IMG/M
3300026193\|Ga0208129_1104849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	552	Open in IMG/M
3300026259\|Ga0208896_1117825	Not Available	732	Open in IMG/M
3300026263\|Ga0207992_1127745	Not Available	651	Open in IMG/M
3300026267\|Ga0208278_1027738	All Organisms → Viruses → Predicted Viral	1481	Open in IMG/M
3300026267\|Ga0208278_1125963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	569	Open in IMG/M
3300026267\|Ga0208278_1132931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	548	Open in IMG/M
3300026279\|Ga0208411_1085431	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	904	Open in IMG/M
3300026279\|Ga0208411_1126217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	691	Open in IMG/M
3300026321\|Ga0208764_10267655	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	830	Open in IMG/M
3300027672\|Ga0209383_1011530	All Organisms → Viruses → Predicted Viral	4145	Open in IMG/M
3300027704\|Ga0209816_1178481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	727	Open in IMG/M
3300027771\|Ga0209279_10021334	Not Available	1982	Open in IMG/M
3300027779\|Ga0209709_10020368	All Organisms → Viruses → Predicted Viral	4363	Open in IMG/M
3300027779\|Ga0209709_10153658	All Organisms → Viruses → Predicted Viral	1125	Open in IMG/M
3300027779\|Ga0209709_10172713	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300027801\|Ga0209091_10019287	All Organisms → Viruses → Predicted Viral	4413	Open in IMG/M
3300027859\|Ga0209503_10072349	All Organisms → Viruses → Predicted Viral	1591	Open in IMG/M
3300028177\|Ga0257122_1158685	Not Available	586	Open in IMG/M
3300028189\|Ga0257127_1072125	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1071	Open in IMG/M
3300028190\|Ga0257108_1165397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	638	Open in IMG/M
3300028287\|Ga0257126_1195621	Not Available	635	Open in IMG/M
3300031644\|Ga0308001_10105601	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300031695\|Ga0308016_10257219	Not Available	654	Open in IMG/M
3300031696\|Ga0307995_1264622	Not Available	584	Open in IMG/M
3300031801\|Ga0310121_10299306	Not Available	943	Open in IMG/M
3300031801\|Ga0310121_10366765	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	826	Open in IMG/M
3300032019\|Ga0315324_10263344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	633	Open in IMG/M
3300032048\|Ga0315329_10691961	Not Available	538	Open in IMG/M
3300032278\|Ga0310345_11384315	Not Available	688	Open in IMG/M
3300032278\|Ga0310345_11512605	Not Available	656	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	56.41%
Unclassified	Environmental → Aquatic → Marine → Unclassified	20.51%
Strait	Environmental → Aquatic → Marine → Strait	5.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.27%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.27%
Inlet	Environmental → Aquatic → Marine → Inlet	3.42%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.56%
Coastal	Environmental → Aquatic → Marine → Coastal	1.71%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	48.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	20.51%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.98%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	5.13%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	3.42%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	2.56%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	43.59%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	17.09%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.98%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.56%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.56%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.56%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	2.56%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	2.56%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.56%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.56%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.56%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.71%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.71%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.85%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.85%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.85%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.85%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.85%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000237	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 150m	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental	Open in IMG/M
3300006309	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0500m	Environmental	Open in IMG/M
3300006318	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0200m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008221	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020333	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX556081-ERR598953)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025830	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300026193	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026263	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 (SPAdes)	Environmental	Open in IMG/M
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental	Open in IMG/M
3300026279	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028177	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_120	Environmental	Open in IMG/M
3300028189	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_135m	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032019	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI34jun09_150mDRAFT_10305072	3300000237	Marine	MTYYLLLDGDSEKDSLYETNVLGEVSFDTFYPSIGFMILSRII
JGI24005J15628_101564022	3300001589	Marine	MTYYLLLSGDSEKDALYETNVLGEESFNTFYPSVGFMIYIE*
JGI24005J15628_101772043	3300001589	Marine	MTYYLLLSGDSEKDTLYETNVLGEESFKTFYPSVGFIILNRIINQ
JGI25129J35166_10761902	3300002484	Marine	MTYYLLLKGDTEKDVIYETNVLGEESFETFYPSVGFMILQRILNQQPDIVKTIK
JGI25133J35611_100393643	3300002514	Marine	MMYYLLLDDDTEKDAIYDTNVLGEESFGVFYPSVGFTAFNNIIRKHPDLVDNVK
Ga0055584_1016987221	3300004097	Pelagic Marine	MTYYLLLNGDTEKDVIYETNVLGEESFGVFYPSIGFNIMSKIINDR
Ga0066849_100476093	3300005430	Marine	MTYYLLLSGDSEKDALYETNVLGEESFETFYPSVGFIILNRII
Ga0066850_101292861	3300005605	Marine	MTYYLLLSGDSEKDALYDTNVLGEESFETFYPSVGFIILNRIINQQP
Ga0082015_10597192	3300006090	Marine	MTYYLLLEGDTEEDALYDTNILGEESFGTFYPSVGFMMLN
Ga0075447_101196422	3300006191	Marine	MTYYLLLDGDTEKDALYDVNILGEESFETFYPSVGFIMLN
Ga0068469_12517711	3300006306	Marine	MTYYLLLKGDTEKDTLFETNVLGEESFETFYPSIGFTVLNKIINENP
Ga0068479_11529382	3300006309	Marine	MTYYLLLSGDSEKDALYETNVLGEESFETFYPSVGL*
Ga0068475_14169472	3300006318	Marine	MTYYLLLSGDSEKDALYETNVLGEESFETFYPSV*
Ga0068501_11652132	3300006325	Marine	MTYYLLLKGDTEKDVFYETNVLGEESFETFYPSVGFIILNRIIKILI
Ga0068502_18703742	3300006336	Marine	MTYYLLLDGDSEKDSLYETNVLGEESFETFYPSIGFIILNRIINDNPE
Ga0100228_12511082	3300006565	Marine	MTYYLLLKGDTEKDVLFETNVLGEESFETFYPSIGFMILQRILND
Ga0098058_10733012	3300006750	Marine	MTYYLLLENDTEEDALYDTNILGEESFGTFYPSVGFMMLNRI
Ga0098040_11902952	3300006751	Marine	MTYYLLLAGDTESDVIYDTNIMGEESFGVFYPSIGFHMFQRIVNQQPELVESIKILDEH
Ga0070747_11158261	3300007276	Aqueous	MTYYLLLSGDSEKDSIYETNVLGEESFGVFYPSIGFNIMSKIINDRPELL
Ga0105020_12895122	3300007514	Marine	MTYYLLLQGDTEKDVFYETNVLGEESFEMFYPSIGFIILQR
Ga0098052_10639663	3300008050	Marine	MTYYLLLSGDSEKDSIYETNVLGEESFETFYPSVGFMIL
Ga0098052_11691172	3300008050	Marine	MTYYLLLSGDSEKDALYETNVLGEVSFETFYPSVGFMIL
Ga0114916_11272221	3300008221	Deep Ocean	MTYYLLLSGDSEKDTLYETNVLGEESFKTFYPSVGFIILNRIINQQPELLES
Ga0115551_11080763	3300009193	Pelagic Marine	MTYYLLLSGDNEKDVIYETNVLGEESFGVFYPSIGFNIMSKIINDRP
Ga0114993_106024091	3300009409	Marine	MTYYLLLEGDSEKDVIYETNVLGEESFNTFYPSVGFMILQRILNQRPDLIETI
Ga0115569_104715022	3300009497	Pelagic Marine	MTYYLLLSGDSEKDSIYETNVLGEESFETFYPSVGFMILNRIINQKPELLESL
Ga0115011_101939853	3300009593	Marine	MTYYLLLSGDSEKDALYETNVLGEESFDTFYPSVGFMILSRIINQQPELLE
Ga0115011_121021422	3300009593	Marine	MTYYLLLSGDSEKDALYDTNVLGEESFETFYPSVGFIILNRIINQQPELLE
Ga0114933_105341062	3300009703	Deep Subsurface	MTYYLLLSGDSERDALYETNVLGEESFETFYPSVGFIILNRIINQEPELLESLQI
Ga0115000_100165607	3300009705	Marine	MTYYLLLSGDSEKDALYETNVLGEESFNTFYPSVGFMILHRI
Ga0115000_104307302	3300009705	Marine	MTYYLLLSGDSEKDTLYETNVLGEESFKTFYPSVGFIILNRI
Ga0115002_107309952	3300009706	Marine	MTYYLLLEGDTEKDALYDTNILGEESFETFYPSVGFMILHRI
Ga0115001_106784542	3300009785	Marine	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPSIGFNIMSNIINNRPELLEDIRILD
Ga0114999_104658672	3300009786	Marine	MTYYLLLDGDTEKDALYDVNILGEESFETFYPSAGFMILLRIINEKPELLE
Ga0115012_106661902	3300009790	Marine	MTYYLLLSGDSEQDALYDTNVLGEESFETFYPSVGFMILNRIINQQPELLESLQILDEQ
Ga0115012_110091761	3300009790	Marine	MTYYLLLEGDSEKDAIFETNVLGEESFGTFYTSVGFMILQRILNNNPEIIDRVKILDERK
Ga0098043_10433602	3300010148	Marine	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPAMGLGLLNKIIQDVEDDALLENIRI
Ga0098056_11221591	3300010150	Marine	MTYYLLLKGDTEKDVMYETNVLGEESFGVFYSSIGFKMLNMIINQRPELIEDIKILDEQKNY
Ga0098059_10159064	3300010153	Marine	MTYYLLLSGDTEKDSLYETNVLGEESFDTFYPSVGFMML
Ga0133547_101886301	3300010883	Marine	MTYYLLLSGDSEKDALYETNVLGEESFNTFYPSVGFMILHRIIND
Ga0160423_112210501	3300012920	Surface Seawater	MTYYLLLDGDSEQDTLYDTNVLGEESFGTFYTSVGFMILQRILDNNPEII
Ga0163110_108034772	3300012928	Surface Seawater	MTYYLLLKGDTEKDAMFETNVLGEESFGVFYPSMGFQLLNRIIQDVESDEFLDKLDKWRIKKA*
Ga0163110_117398932	3300012928	Surface Seawater	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPAMGLGLLNKIIQD
Ga0181367_10513861	3300017703	Marine	MTTYYLLLEGDTEEDSFYETNVLGEESLGTFYPGQGF
Ga0181372_10828742	3300017705	Marine	MTYYLLLSGDSEKDSLYDTNVLGEESFETFYPSVGFMILSRIVNQQPELLEFSCLQSNSTTI
Ga0181417_11594051	3300017730	Seawater	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPAMGLGLLNKIIQDVEDDALLEN
Ga0181416_11269562	3300017731	Seawater	MTYYLLLNGDTEKDVIYETNVLGEESFGVFYPSMGLGLLNKIIQDVED
Ga0181416_11509001	3300017731	Seawater	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPSMGLGLLNKIIQDVED
Ga0181428_11505701	3300017738	Seawater	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPSMGLGLLNKIIQDVEDDALLE
Ga0181397_11647122	3300017744	Seawater	MTYYLLLDGDTEKDVIYETNVLGEESFETFYPSVGFMILNRIVNQQPELLE
Ga0181423_11312082	3300017781	Seawater	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPSMGLGLLNKIIQDVEDDALLEDIRILD
Ga0181379_11349322	3300017783	Seawater	MTYYLLLNGDTEKDVIYETNVLGEESFGVFYPSIGFNIMSKIINDRPELLE
Ga0206127_11974043	3300020169	Seawater	MTYYLLLSGDSEKDSIYETNVLGEESFETFYPSVGFMILNRIINQKPELL
Ga0211661_11225162	3300020333	Marine	MKYYLLLSGATEKDSIYETNVLGDESFGTFYPSVGFMILQRIVDQTPDVVESVKII
Ga0211477_102252101	3300020374	Marine	MIYYLLLSGDEESDTIYEPNMIGEESFKVFYPALGFHLLNKIIN
Ga0211682_100206111	3300020376	Marine	MTYYLLLNGDSEKDSLYETNVLGEESFDTFYPSVGFMILSRII
Ga0211521_100270701	3300020428	Marine	MTYYLLLSGDSEKDTLYETNVLGEESFDTFYPSVGFMMLHRIINQQPELLESIQILDEQKKS
Ga0211521_104846771	3300020428	Marine	MTYYLLLSGDSEKDALYDTNVLGEESFETFYPSVGFMILHRIINQQPELLESL
Ga0211639_100799243	3300020435	Marine	MKYYLLLSGATEKDSIYETNVLGDESFGTFYPSVGFMILQRIVDQ
Ga0211695_104332651	3300020441	Marine	MTYYLLLSGDSEKDSIYETNVLGEESFETFYPSVGFMILNRIIN
Ga0211691_101662521	3300020447	Marine	MTYYLLLSGDSEEDALYDTNVLGEESFEMFYPEKGLVA
Ga0211642_100675601	3300020449	Marine	MKYYLLLSGATEKDSIYETNVLGDESFGTFYPSVGFMILQRIVDQTPDVVESV
Ga0211548_101807161	3300020454	Marine	MTYYLLLSGDSEKDSIYETNVLGEESFETFYPSVGFMILNRI
Ga0211676_102431242	3300020463	Marine	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPAMGL
Ga0211543_105580291	3300020470	Marine	MTYYLLLKGDTEKDVMFETNVLGEDSFGVFYPAMGFNVLHKIINQKPELME
Ga0211614_101891922	3300020471	Marine	MIYYLLLSGDTEKDLVNETNILGEESFKVFYPSLGFNMLHKIINTKPELLE
Ga0211547_102060963	3300020474	Marine	MTYYLLLKGDSEKDTMFETNVLGEESFGTFYTSVGFMILQR
Ga0211503_106562762	3300020478	Marine	MTYYLLLSGDSEKDSLYETNVLGEESFETFYPSVGFIILNRIINQQPELLESLKILDDHKKSY
Ga0211503_106567812	3300020478	Marine	MTYYLLLQGDTEKDVFYETNVLGEESFEMFYPSIGFIILQRIIDDKPEVLETVKILDERKNA
Ga0206126_101291152	3300020595	Seawater	MTYYLLLSGDSEEDALYETNVLGEESFKTFYPSVGFMILHRIINQQPELLESLQIIDEH
Ga0206685_102558962	3300021442	Seawater	MTYYLLLSGDSEKDALYDTNVLGEESFETFYPSVGFIILNRIINQQPEL
Ga0222716_104568351	3300021959	Estuarine Water	MTYYLLLDGDTEKDVIYETNVLGEESFGVFYPSMGLGLLNKIIQDVEDDAL
(restricted) Ga0233444_100956311	3300024264	Seawater	MTYYLLLDGDSEKDSLYETNVLGEVSFDTFYPSIGFMILSRIINQEPELLE
Ga0208920_10894022	3300025072	Marine	MTYYLLLEGDTEEDALYDTNILGEESFGTFYPSVGFMMLSRIIND
Ga0208156_10383852	3300025082	Marine	MTYYLLLEGDTEEDALYDTNILGEESFGTFYPSVGFMMLNRII
Ga0208157_10710711	3300025086	Marine	MTYYLLLSGDTEKDSLYETNVLGEESFDTFYPSVGFMMLHRIVNQKPELL
Ga0208011_10187531	3300025096	Marine	MTYYLLLKGDTEKDVFYETNVLGEESFETFYPSIGFIILN
Ga0208666_10481022	3300025102	Marine	MTYYLLLSGDTEKDSLYETNVLGEESFDTFYPSVGFM
Ga0208553_10868261	3300025109	Marine	MTYYLLLEGDTEEDALYDTNILGEESFGTFYPSVGFMMLSRIINDK
Ga0209434_10312011	3300025122	Marine	MTYYLLLEGDTEEDTLYDTNILGEVSFGTFYPSVGFMILQRIVDQTPDVVESVKIIDDQGNSHTIT
Ga0209644_10608782	3300025125	Marine	MTYYLLLKGDTEKDVFYETNVLGEESFETFYPSIGFIILNRIINDNPELVETIKILD
Ga0209348_12252862	3300025127	Marine	MTYYLLLKGDTEKDVIFDTNVLGEESFGVFYPSQGFNLLHKIINEKPELLEEIRIIDDHK
Ga0208299_10580712	3300025133	Marine	MTYYLLLSGDSEKDSIYETNVLGEESFETFYPSVGFMILNRIINQQPELL
Ga0209832_12018312	3300025830	Pelagic Marine	MTYYLLLNGDTEKDVIYETNVLGEESFGVFYPSIGFNIMSKIINDRPELLEDI
Ga0209631_103613512	3300025890	Pelagic Marine	MTYYLLLNGDTEKDVIYETNVLGEESFGVFYPSIGFNIMSKIIN
Ga0209630_104015461	3300025892	Pelagic Marine	MTYYLLLSGDNEKDVIYETNVLGEESFGVFYPSIGF
Ga0208129_11048492	3300026193	Marine	MTYYLLLENDTEEDALYDTNILGEESFGTFYPSVGF
Ga0208896_11178252	3300026259	Marine	MRYYLLLNNDSEKDTLYETNVLGEESFEVFYPEKGFIALRNIVHNQPELLESLQILD
Ga0207992_11277451	3300026263	Marine	MTYYLLLSGDSEKDSLYETNVLGEESFETFYPSVGFMIL
Ga0208278_10277381	3300026267	Marine	MIYYLLLKGDTEKDTIYETNVLGEESFEIFYPSIGFIMLNRIVKEKPEILET
Ga0208278_11259632	3300026267	Marine	MTYYLLLENDTEEDALYDTNILGEESFGTFYPSVGFMMLNR
Ga0208278_11329311	3300026267	Marine	MTYYLLLEGDTEEDALYDTNILGEESFGTFYPSVGFMMLNR
Ga0208411_10854311	3300026279	Marine	MTYYLLLSGDSEKDSLYETNVLGEESFETFYPSVGFMILSRIVNQQPELLESLQILDEQK
Ga0208411_11262172	3300026279	Marine	MTYYLLLEGDTEEDALYDTNILGEESFGTFYPSVGF
Ga0208764_102676551	3300026321	Marine	MTYYLLLNGDSEKDALYETNVLGEESFETFYPSVGFIILNRIINQQPE
Ga0209383_10115305	3300027672	Marine	MTYYLLLSGDSEKDTLYETNVLGEESFKTFYPSVGFMILSRIINQQPE
Ga0209816_11784811	3300027704	Marine	MTYYLLLSGDSEKDTLYETNVLGEESFKTFYPSVGFM
Ga0209279_100213344	3300027771	Marine	MTYYLLLSGDSEKDTLYETNVLGEESFKTFYPSVGFMILSRIINQQPELLESLQNKCFR
Ga0209709_100203681	3300027779	Marine	MTYYLLLSGDSEKDALYETNVLGEESFNTFYPSVGFM
Ga0209709_101536583	3300027779	Marine	MTYYLLLSGDSEKDTLYETNVLGEESFKTFYPSVGFIILNRIINQQ
Ga0209709_101727131	3300027779	Marine	MTYYLLLDGDTEKDVIYETNVLGEESFEVFYPSIGFNIMSNIINNRPEL
Ga0209091_100192877	3300027801	Marine	MTYYLLLSGDSEKDALYETNVLGEESFNTFYPSVGFMILHRIINDK
Ga0209503_100723491	3300027859	Marine	MTYYLLLKGDSEKDTMFETNVLGEESFGTFYTSVGFMILQRILNDK
Ga0257122_11586851	3300028177	Marine	MTYYLLLDGDSEKDSLYETNVLGEVSFDTFYPSIGFMILSRIINQEPELLESL
Ga0257127_10721251	3300028189	Marine	MTYYLLLDGDSEKDSLYETNVLGEVSFDTFYPSIGFMILSRIINQEPELLESLRI
Ga0257108_11653972	3300028190	Marine	MTYYLLLEGDTEEDALYDTNILGEVSFGTFYPSIGFIMLNRIINEKPELLETIQILDEHKNSY
Ga0257126_11956211	3300028287	Marine	MTYYLLLDGDSEKDSLYETNVLGEVSFDTFYPSIGFMILSR
Ga0308001_101056011	3300031644	Marine	MTYYLLLNGDSEKDSLYETNVLGEESFDTFYPSVGFMI
Ga0308016_102572192	3300031695	Marine	MTYYLLLSGDSEKDTMYETNVLGEESFKTFYPSVGFIILNRIINQ
Ga0307995_12646222	3300031696	Marine	MTYYLLLSGDSEKDTLYETNVLGEESFKTFYPSVGFIILNRIIN
Ga0310121_102993061	3300031801	Marine	MTYYLLLEGDTEEDALYDTNILGEESFGTFYPSAGFMILLRIIN
Ga0310121_103667652	3300031801	Marine	MTYYLLLSGDSEKDAIYETNALGEESFETFYPSVGFMILHRIINQQPEL
Ga0315318_102033283	3300031886	Seawater	MTYYLLLAGDTESDVIYDTNIMGEESFGVFYPSIGFHMFQRI
Ga0315324_102633442	3300032019	Seawater	MTYYLLLEGDTEEDAMYDTNILGEVSFGTFYPSVGFMMLNRIINDKPELLETIQIL
Ga0315329_106919612	3300032048	Seawater	MTYYLLLSGDSEKDALYDTNVLGEESFEMFYPEKGLVALKNIVN
Ga0310345_113843151	3300032278	Seawater	MTYYLLLSGDSEKDSLYETNVLGEESFETFYPSIGFIILNRIINNNP
Ga0310345_115126052	3300032278	Seawater	MTYYLLLSGDSEKDALYDTNVLGEESFEMFYPEKGLVALKNIVNNQPELMESIQILDDHK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters