Metagenome / Metatranscriptome Family F077474

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077474
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	91 residues
Representative Sequence	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL
Number of Associated Samples	97
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.68 %
% of genes near scaffold ends (potentially truncated)	41.03 %
% of genes from short scaffolds (< 2000 bps)	81.20 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.957 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.239 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.137 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 28.89% Coil/Unstructured: 37.78%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01406	tRNA-synt_1e	47.01
PF01687	Flavokinase	26.50
PF06574	FAD_syn	10.26
PF09190	DALR_2	4.27
PF00202	Aminotran_3	2.56
PF08899	DUF1844	2.56
PF12706	Lactamase_B_2	1.71
PF13478	XdhC_C	0.85
PF01025	GrpE	0.85
PF01087	GalP_UDP_transf	0.85
PF14534	DUF4440	0.85
PF00753	Lactamase_B	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	51.28
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	47.01
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	47.01
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	36.75
COG0576	Molecular chaperone GrpE (heat shock protein HSP-70)	Posttranslational modification, protein turnover, chaperones [O]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.96 %
Unclassified	root	N/A	35.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.96 %
Unclassified	root	N/A	35.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.96 %
Unclassified	root	N/A	35.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.71 %
Aquificae	phylum	All Organisms → cellular organisms → Bacteria → Aquificae	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	17.09 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %
Aquificae	class	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	17.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %
Aquificales	order	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	17.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Aquificales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificales genera incertae sedis	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	17.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %
Thermosulfidibacter	genus	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificales genera incertae sedis → Thermosulfidibacter	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	17.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %
Thermosulfidibacter takaii	species	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificales genera incertae sedis → Thermosulfidibacter → Thermosulfidibacter takaii	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	17.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %
Thermosulfidibacter takaii ABI70S6	strain	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificales genera incertae sedis → Thermosulfidibacter → Thermosulfidibacter takaii → Thermosulfidibacter takaii ABI70S6	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9070719	Not Available	1019	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2129842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13723641	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300000443\|F12B_10851333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	508	Open in IMG/M
3300000559\|F14TC_100162589	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300000891\|JGI10214J12806_11254564	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300001431\|F14TB_101775879	Not Available	764	Open in IMG/M
3300003997\|Ga0055466_10265560	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300004114\|Ga0062593_101331932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300004114\|Ga0062593_101629671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300004157\|Ga0062590_100677360	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300004463\|Ga0063356_101283531	Not Available	1070	Open in IMG/M
3300004479\|Ga0062595_100978533	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300004480\|Ga0062592_100258432	Not Available	1284	Open in IMG/M
3300005288\|Ga0065714_10276920	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificales genera incertae sedis → Thermosulfidibacter → Thermosulfidibacter takaii → Thermosulfidibacter takaii ABI70S6	729	Open in IMG/M
3300005294\|Ga0065705_10142788	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300005333\|Ga0070677_10809377	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005336\|Ga0070680_100280584	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300005339\|Ga0070660_101629111	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005340\|Ga0070689_102198978	Not Available	506	Open in IMG/M
3300005343\|Ga0070687_100182856	Not Available	1257	Open in IMG/M
3300005353\|Ga0070669_101165797	Not Available	665	Open in IMG/M
3300005354\|Ga0070675_100021693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5131	Open in IMG/M
3300005354\|Ga0070675_100275150	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300005366\|Ga0070659_100840864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300005367\|Ga0070667_100232582	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300005406\|Ga0070703_10226733	Not Available	747	Open in IMG/M
3300005444\|Ga0070694_100125539	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300005535\|Ga0070684_100153992	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300005563\|Ga0068855_102324218	Not Available	536	Open in IMG/M
3300005718\|Ga0068866_11473113	Not Available	500	Open in IMG/M
3300005719\|Ga0068861_101466042	Not Available	668	Open in IMG/M
3300005844\|Ga0068862_100292838	Not Available	1495	Open in IMG/M
3300005844\|Ga0068862_102378398	Not Available	541	Open in IMG/M
3300006196\|Ga0075422_10074986	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300006844\|Ga0075428_102675521	Not Available	509	Open in IMG/M
3300006845\|Ga0075421_100036527	All Organisms → cellular organisms → Bacteria	6224	Open in IMG/M
3300006845\|Ga0075421_100211410	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300006845\|Ga0075421_101509723	Not Available	734	Open in IMG/M
3300006845\|Ga0075421_102010057	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300006845\|Ga0075421_102244977	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006846\|Ga0075430_100024430	All Organisms → cellular organisms → Bacteria → Acidobacteria	5142	Open in IMG/M
3300006854\|Ga0075425_102812493	Not Available	535	Open in IMG/M
3300006865\|Ga0073934_10002810	All Organisms → cellular organisms → Bacteria	34379	Open in IMG/M
3300006880\|Ga0075429_100278479	Not Available	1465	Open in IMG/M
3300006918\|Ga0079216_10890786	Not Available	669	Open in IMG/M
3300006931\|Ga0097620_102656737	Not Available	550	Open in IMG/M
3300006969\|Ga0075419_10711396	Not Available	713	Open in IMG/M
3300007004\|Ga0079218_10057757	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300007004\|Ga0079218_10154192	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300007004\|Ga0079218_10411507	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300009100\|Ga0075418_12006539	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009156\|Ga0111538_10166667	All Organisms → cellular organisms → Bacteria	2798	Open in IMG/M
3300009156\|Ga0111538_11062267	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300009156\|Ga0111538_12154029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300009177\|Ga0105248_10670952	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300009678\|Ga0105252_10506584	Not Available	557	Open in IMG/M
3300010036\|Ga0126305_10108998	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300010037\|Ga0126304_10002849	All Organisms → cellular organisms → Bacteria	8631	Open in IMG/M
3300010397\|Ga0134124_12055313	Not Available	609	Open in IMG/M
3300010399\|Ga0134127_10013230	All Organisms → cellular organisms → Bacteria	6195	Open in IMG/M
3300010401\|Ga0134121_11775857	Not Available	642	Open in IMG/M
3300010403\|Ga0134123_10341376	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300010403\|Ga0134123_10424016	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300011423\|Ga0137436_1191715	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300011430\|Ga0137423_1117675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300011445\|Ga0137427_10048847	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300014326\|Ga0157380_10495511	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300015371\|Ga0132258_13441772	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300015372\|Ga0132256_102441327	Not Available	625	Open in IMG/M
3300018083\|Ga0184628_10026884	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2858	Open in IMG/M
3300018469\|Ga0190270_10025652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3741	Open in IMG/M
3300025310\|Ga0209172_10002287	All Organisms → cellular organisms → Bacteria	34670	Open in IMG/M
3300025315\|Ga0207697_10079232	Not Available	1383	Open in IMG/M
3300025559\|Ga0210087_1027275	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300025893\|Ga0207682_10073019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1456	Open in IMG/M
3300025903\|Ga0207680_10232285	Not Available	1268	Open in IMG/M
3300025908\|Ga0207643_10069505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2024	Open in IMG/M
3300025917\|Ga0207660_10069021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2565	Open in IMG/M
3300025921\|Ga0207652_10483936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1115	Open in IMG/M
3300025923\|Ga0207681_10372003	Not Available	1148	Open in IMG/M
3300025925\|Ga0207650_10283885	Not Available	1349	Open in IMG/M
3300025926\|Ga0207659_11864997	Not Available	510	Open in IMG/M
3300025932\|Ga0207690_11489120	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300025933\|Ga0207706_10352421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1280	Open in IMG/M
3300025936\|Ga0207670_11461502	Not Available	581	Open in IMG/M
3300026118\|Ga0207675_101480992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300026121\|Ga0207683_10730695	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	918	Open in IMG/M
3300026142\|Ga0207698_11171125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	782	Open in IMG/M
3300027886\|Ga0209486_10051072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2070	Open in IMG/M
3300027886\|Ga0209486_10090928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1604	Open in IMG/M
3300027886\|Ga0209486_10157490	Not Available	1256	Open in IMG/M
3300027907\|Ga0207428_10082514	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300027909\|Ga0209382_10121013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3052	Open in IMG/M
3300027909\|Ga0209382_10209515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2230	Open in IMG/M
3300027909\|Ga0209382_12268806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	511	Open in IMG/M
3300028812\|Ga0247825_10178215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1465	Open in IMG/M
3300031538\|Ga0310888_10058485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1833	Open in IMG/M
3300031538\|Ga0310888_10124429	Not Available	1344	Open in IMG/M
3300031538\|Ga0310888_10825351	Not Available	575	Open in IMG/M
3300031547\|Ga0310887_10162942	Not Available	1180	Open in IMG/M
3300031716\|Ga0310813_10076371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2544	Open in IMG/M
3300031740\|Ga0307468_100024909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2731	Open in IMG/M
3300031854\|Ga0310904_11074595	Not Available	576	Open in IMG/M
3300031858\|Ga0310892_10142795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1377	Open in IMG/M
3300031858\|Ga0310892_11310988	Not Available	518	Open in IMG/M
3300031892\|Ga0310893_10084146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1136	Open in IMG/M
3300031913\|Ga0310891_10209905	Not Available	658	Open in IMG/M
3300032003\|Ga0310897_10181187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300032005\|Ga0307411_12313782	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032013\|Ga0310906_10431302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300032144\|Ga0315910_10152518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1720	Open in IMG/M
3300032179\|Ga0310889_10103534	Not Available	1215	Open in IMG/M
3300032180\|Ga0307471_103313590	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300032211\|Ga0310896_10584993	Not Available	621	Open in IMG/M
3300032211\|Ga0310896_10897178	Not Available	513	Open in IMG/M
3300034667\|Ga0314792_213544	Not Available	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.41%
Host-Associated	Host-Associated	43.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.72%
Plants	Host-Associated → Plants	43.59%
Aquatic	Environmental → Aquatic	7.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.97%
Sediment	Environmental → Aquatic → Sediment	4.27%
Marine	Environmental → Aquatic → Marine	1.71%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.27%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.71%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.56%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.27%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.56%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.71%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00768120	2088090015	Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYVGCNEPSAAAFGERVAEAVGAHMNGSIAHTSSSIAVVVRRSTGPLEVQVATRTIALDL
ICChiseqgaiiDRAFT_21298421	3300000033	Soil	VDATTFEFQLSVPRDAQIAAIVRMMAEQAARYAGCTEPNAAAFGERVAEAVRAHVNGSSGPGAIPIVVRRSTGPLEVQVDTHTVALEL*
ICChiseqgaiiFebDRAFT_137236412	3300000363	Soil	VDATTFYFQLLVPRNAEVAALVRMLAEQAARYAGCNEPGAAAFGEQVAEAVRAQLNGSFDPTTNSIPVVVRRSTGPLEVQVDTRTIALEL*
F12B_108513331	3300000443	Soil	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARFVGCNEPSAAEFGERVAEAVGAHLNGSIVHTSNSIAVVVRRSTGPLEVQIATRTVAL
F14TC_1001625892	3300000559	Soil	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNQPSAAAFGERVAEAVGAHLNGSIVHASSSIAVVVRRSTGPLEVQVATRTIALEL*
JGI10214J12806_112545642	3300000891	Soil	VDATTFEFQLSVPRDAQIAAIVRMMAEQAARYAGCTEPNAAAFGERVAEAVRAHVNGSPGHGVIPIVVRRSTGPLEVQVDTHTVALEL*
F14TB_1017758792	3300001431	Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNQPSAAAFGERVAEAVGAHLNGSIVHASSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0055466_102655602	3300003997	Natural And Restored Wetlands	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYVGCNEPSAAAFGERVAEAGGAHLNGSIAHGSNSIAVVVRRSTGPL
Ga0062593_1013319321	3300004114	Soil	QPDFGVVVDATTFEFQVSVPHNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0062593_1016296711	3300004114	Soil	TTFEFQVSVPRNAEVAAVVRMLAEQAARYVGCNEPSAAAFGERVAEAVGAHVNGSIAHTSSSIAVVVRRSTGPLEVQVATRTIALDL*
Ga0062590_1006773602	3300004157	Soil	VDATTFEFQVSVPHNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0063356_1012835311	3300004463	Arabidopsis Thaliana Rhizosphere	QPDFGVVVDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0062595_1009785332	3300004479	Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL*
Ga0062592_1002584321	3300004480	Soil	PRRPSLQPDFGVVVDATTFEFQVSVPHNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0065714_102769202	3300005288	Miscanthus Rhizosphere	VDATTFEFQVSVPRNAEVAAVGRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL*
Ga0065705_101427882	3300005294	Switchgrass Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0070677_108093771	3300005333	Miscanthus Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRT
Ga0070680_1002805841	3300005336	Corn Rhizosphere	VPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGTIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0070660_1016291111	3300005339	Corn Rhizosphere	VPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSTSIAVVVRRSTGPLEVQVGTRTIALE
Ga0070689_1021989781	3300005340	Switchgrass Rhizosphere	PSLQPDFGVVVDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0070687_1001828562	3300005343	Switchgrass Rhizosphere	AAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0070669_1011657971	3300005353	Switchgrass Rhizosphere	RADRSRRAARHSPVQPHHCLVVDATTFEFQLSVPRDAEVAAIVRMMAEQAARYAGCNEPSAAAFGEKVAEAVRAHLNGSPGHHAIPVVVRRSTGPLEVQVDTRTVALEL*
Ga0070675_1000216931	3300005354	Miscanthus Rhizosphere	QVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0070675_1002751502	3300005354	Miscanthus Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL*
Ga0070659_1008408642	3300005366	Corn Rhizosphere	DFGVVVDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAAFGERVAEAVGAHVNGSIAHTSSSIAVVVRRSTGPLEVQVATRTIALDL*
Ga0070667_1002325823	3300005367	Switchgrass Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCDELSAAAFGERVAEAVGAHLNGSIVQTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0070703_102267332	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGTIVHTSSSIAVVVRRST
Ga0070694_1001255392	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL*
Ga0070684_1001539922	3300005535	Corn Rhizosphere	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYVGCNEPSAAAFGERVAEAVGAHVNGSIAHTSSSIAVVVRRSTGPLEVQVATRTIALDL*
Ga0068855_1023242182	3300005563	Corn Rhizosphere	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSVAHTSGSIAVVVRRYTGPLEVQVATRTIALDL*
Ga0068866_114731131	3300005718	Miscanthus Rhizosphere	ADRSGPAPRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCDELSAAAFGERVAEAVGAHLNGSIVQTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0068861_1014660422	3300005719	Switchgrass Rhizosphere	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVAL
Ga0068862_1002928381	3300005844	Switchgrass Rhizosphere	RGCAARADRSGPAPRRPSLQPDFGVVVDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL*
Ga0068862_1023783982	3300005844	Switchgrass Rhizosphere	ADRSGPAPRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL*
Ga0075422_100749862	3300006196	Populus Rhizosphere	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSNSIAVVVRRSTGPLEVQIATRTVALEL*
Ga0075428_1026755211	3300006844	Populus Rhizosphere	DATTFYFQLLVPRNAEVAALVRMMAEQAARYAGCNEPGAAAFGEQVAEAIRAQLNGSLAPTTSCIPVVVRRSTGPLEVQVDTRTIALEL*
Ga0075421_1000365273	3300006845	Populus Rhizosphere	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYAGCNELGAAAFGERVAEAVGAQLNGAGAHTSGLIPVVVRRSTGPLEVRVDTRTIALEL*
Ga0075421_1002114102	3300006845	Populus Rhizosphere	VDATTFYFQLLVPRNAEVAALVRMMAEQAARYAGCNEPGAAAFGEQVAEAIRAQLNGSLAPTTSCIPVVVRRSTGPLEVQVDTRTIALEL*
Ga0075421_1015097231	3300006845	Populus Rhizosphere	PRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSNSIAVVVRRSTGPLEVQIATRTVALEL*
Ga0075421_1020100572	3300006845	Populus Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGTIVHTSSSIAVVVRRSTGPLEVQVATRTIALDL*
Ga0075421_1022449771	3300006845	Populus Rhizosphere	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSASAFGERVAEAVRAQLNGAVAPTSAPIPVVVRRSTGPLEVRVDTRTI
Ga0075430_1000244302	3300006846	Populus Rhizosphere	VDATTFYFQLLVPRNAEVAALVRMMAEQAARYAGCNEPGAAAFGEQVAEAIRAQLNGSLAPTTSSIPVVVRRSTGPLEVQVDTRTIALEL*
Ga0075425_1028124932	3300006854	Populus Rhizosphere	VSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL*
Ga0073934_1000281022	3300006865	Hot Spring Sediment	VDATTFHFEVSVPCDAEVAGVIRMLAEHAARYAGCSERGAAAFGERVAEVVRAQLNGSAAQNSSSIPVVVRRATGPLEVQVASRTVALEL*
Ga0075429_1002784792	3300006880	Populus Rhizosphere	SLQPDFGVVVDATTFEFQVSVPRDAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL*
Ga0079216_108907861	3300006918	Agricultural Soil	SGPAPRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCDEPSAAAFGEQVAEAVRAHLNGSIAHTSTSIPVVVRRSTGPLEVQVATRTVALKL*
Ga0097620_1026567371	3300006931	Switchgrass Rhizosphere	ADRSGPAPRRPSLQPDFGVVVDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL*
Ga0075419_107113962	3300006969	Populus Rhizosphere	PRRPSLQPDFGVVVDATTFEFQVSVPRDAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL*
Ga0079218_100577573	3300007004	Agricultural Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCDEPSAAAFGEQVAEAVRAHLNGSIAHTATSIPVVVRRSTGPLEVQVATRTVALKL*
Ga0079218_101541922	3300007004	Agricultural Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYVGCNEPSAAEFGDRVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTVALEL*
Ga0079218_104115072	3300007004	Agricultural Soil	VPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEALRAHLNGSVAPTSSSISVVVRRSTGPLEVQVATRTVALEL*
Ga0075418_120065391	3300009100	Populus Rhizosphere	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSASAFGERVAEAVRAQLNGAVAPTSAPIPVVVRRSTGPLEVRVDTRTIALEL*
Ga0111538_101666672	3300009156	Populus Rhizosphere	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVIVRRSTGPLEVLVATRTVALDL*
Ga0111538_110622672	3300009156	Populus Rhizosphere	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL*
Ga0111538_121540291	3300009156	Populus Rhizosphere	LLVPRNAEVAALVRMLAEQAARYAGCNEPGAAAFGEQVAEAVRAQLNGSLDPATNSIPVVVRRSTGPLEVQVDTRTIALEL*
Ga0105248_106709522	3300009177	Switchgrass Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRPSTAPLEVQVATRTIALEL*
Ga0105252_105065841	3300009678	Soil	RAPRQSSVQPHYRITVDATRFEFQVSVPRDAEIAAVVRMLAEQAAKYAGCNESGAAAFGEQVAEAVRAHLNGSHGHTAIPVIVRRSTGPLEVQVENRTVALDL*
Ga0126305_101089982	3300010036	Serpentine Soil	VDATTFEFQVSVPRNAEVAVVVRMLAEQAARYVGCNEPSAAAFGDRVAEVVGAHLNGSVAHTSSSIAVVVRRSTGPLEVQIATRTVALDL*
Ga0126304_100028495	3300010037	Serpentine Soil	VDATTFEFQVSVPRNAEVAVVVRMLAEQAARYVGCNEPSAAAFGERVAEVVGAHLNGSVAHTSSSIAVVVRRSTGPLEVQIATRTVALDL*
Ga0134124_120553132	3300010397	Terrestrial Soil	DFGVVVDATTFEFQVSVPGVAEMAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL*
Ga0134127_100132305	3300010399	Terrestrial Soil	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGTIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0134121_117758571	3300010401	Terrestrial Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIAL
Ga0134123_103413763	3300010403	Terrestrial Soil	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIAI
Ga0134123_104240161	3300010403	Terrestrial Soil	QLSVPRDAEVAAIVRMMAEQAARYAGCNEPSAAAFGEKVAEAVRAHLNGSPGHHAIPVVVRRSTGPLEVQVDTRTVALEL*
Ga0137436_11917152	3300011423	Soil	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLSGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0137423_11176752	3300011430	Soil	VDATRFEFQVSVPRDAEIAAVVRMLAEQAAKYAGCNESGAAAFGEQVAEAVRAHLNGSHGHTAIPVIVRRSTGPLEVQVENRTVALDL*
Ga0137427_100488472	3300011445	Soil	VDATRFEFQVSVPRDAEVAAVVRMLAEQAAKYAGCNESGAAAFGEQVAEAVRAHLNGSHGHTAIPVIVRRSTGPLEVQVENRTVALDL*
Ga0157380_104955112	3300014326	Switchgrass Rhizosphere	VPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL*
Ga0132258_134417722	3300015371	Arabidopsis Rhizosphere	VDATTFYFQLLVPRNAEVAALVRMLAEQAARYAGCNEPGAAAFGEQVAEAVRAQLNGSLDPTTNSIPVVVRRSTGPLEVQVDTRTIALEL*
Ga0132256_1024413272	3300015372	Arabidopsis Rhizosphere	VPRNAEVAALVRMLAEQAARFAGCNEPGAAAFGEQVAEAVRAQLNGSLDPTTNSIPVVVRRSTGPLEVQVDTRTIALEL*
Ga0184628_100268842	3300018083	Groundwater Sediment	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLSGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0190270_100256522	3300018469	Soil	VDATRFEFQVSVPRDAEVAAVVRMLAEQAAKYAGCNESGAAAFGEQVAEAVRAHLNGSHGHTAIPVIVRRSTGPLEVQVDNRTVALDL
Ga0209172_1000228722	3300025310	Hot Spring Sediment	VDATTFHFEVSVPCDAEVAGVIRMLAEHAARYAGCSERGAAAFGERVAEVVRAQLNGSAAQNSSSIPVVVRRATGPLEVQVASRTVALEL
Ga0207697_100792322	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0210087_10272752	3300025559	Natural And Restored Wetlands	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAAFGERVAEAVGAHLNGSIAHGSSSIAVVVRRSTGPLEVQVATRTVALDL
Ga0207682_100730192	3300025893	Miscanthus Rhizosphere	VDATTFEFQVSVPRNAEIAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0207680_102322851	3300025903	Switchgrass Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTI
Ga0207643_100695052	3300025908	Miscanthus Rhizosphere	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL
Ga0207660_100690212	3300025917	Corn Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGTIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0207652_104839362	3300025921	Corn Rhizosphere	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL
Ga0207681_103720032	3300025923	Switchgrass Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCDELSAAAFGERVAEAVGAHLNGSIVQTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0207650_102838851	3300025925	Switchgrass Rhizosphere	VDATTFEFQVSVPHNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0207659_118649972	3300025926	Miscanthus Rhizosphere	SVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL
Ga0207690_114891201	3300025932	Corn Rhizosphere	VPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL
Ga0207706_103524212	3300025933	Corn Rhizosphere	VDATTFEFQLSVPRDAEVAAIVRMMAEQAARYAGCNEPSAAAFGEKVAEAVRAHLNGSPGHHAIPVVVRRSTGPLEVQVDTRTVALEL
Ga0207670_114615022	3300025936	Switchgrass Rhizosphere	PSLQPDFGVVVDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0207675_1014809922	3300026118	Switchgrass Rhizosphere	PRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0207683_107306952	3300026121	Miscanthus Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVQTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0207698_111711252	3300026142	Corn Rhizosphere	VDATTFEFQVSVPGDAVMTAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL
Ga0209486_100510722	3300027886	Agricultural Soil	VPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEALRAHLNGSVAPTSSSISVVVRRSTGPLEVQVATRTVALEL
Ga0209486_100909282	3300027886	Agricultural Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYVGCNEPSAAEFGDRVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVATRTVALEL
Ga0209486_101574902	3300027886	Agricultural Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCDEPSAAAFGEQVAEAVRAHLNGSIAHTATSIPVVVRRSTGPLEVQVATRTVALKL
Ga0207428_100825141	3300027907	Populus Rhizosphere	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSNSIAVVVRRSTGPLEVQIATRTVALEL
Ga0209382_101210132	3300027909	Populus Rhizosphere	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYAGCNELGAAAFGERVAEAVGAQLNGAGAHTSGLIPVVVRRSTGPLEVRVDTRTIALEL
Ga0209382_102095153	3300027909	Populus Rhizosphere	VDATTFYFQLLVPRNAEVAALVRMMAEQAARYAGCNEPGAAAFGEQVAEAIRAQLNGSLAPTTSCIPVVVRRSTGPLEVQVDTRTIALEL
Ga0209382_122688062	3300027909	Populus Rhizosphere	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGTIVHTSSSIAVVVRRSTGPLEVQVATRTIALDL
Ga0247825_101782152	3300028812	Soil	VDATKFEFQLSVPRDAQVADVVRMLAEQAARYAGCNEPGAAAFGEKVAEAVLAQLNGSSGHGSIPVVVRRSTGPLEVQVDNRTVALDL
Ga0310888_100584852	3300031538	Soil	VDATTFEFQLSVPRDAQIAAIVRMMAEQAARYAGCTEPNAAAFGERVAEAVRAHVNGSPGHGVIPIVVRRSTGPLEVQVDTHTVALEL
Ga0310888_101244291	3300031538	Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQIATRTIALEL
Ga0310888_108253512	3300031538	Soil	RSGPAPRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCDELSAAAFGERVAEAVGAHLNGSIVQTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0310887_101629421	3300031547	Soil	FEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQIATRTIALEL
Ga0310813_100763712	3300031716	Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCKEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL
Ga0307468_1000249092	3300031740	Hardwood Forest Soil	VDATTFEFQLSVPRDAQIAAVVRMMAEQAAKYAGCTEPNAAAFGERVAEAVRAHVNGSPGHGAIPIVVRRSTGPLEVQVDTRTVALEL
Ga0310904_110745952	3300031854	Soil	PRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRSTGPLEVQVATRTIALDL
Ga0310892_101427952	3300031858	Soil	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGHLEVQVATRTVALDL
Ga0310892_113109882	3300031858	Soil	ADRSGPAPRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCDELSAAAFGERVAEAVGAHLNGSIVQTSSSIAVVVRRSTGPLEVQVATRTIALEL
Ga0310893_100841462	3300031892	Soil	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQIATRTIALEL
Ga0310891_102099051	3300031913	Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQVAT
Ga0310897_101811871	3300032003	Soil	ACADRSGPAPRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQIATRTIALEL
Ga0307411_123137822	3300032005	Rhizosphere	VDATTFEFQVSVPRDAEVAAVVRMLAEQAARYAGCNEPSAAAFGDRVAEAVVAHLNGSIGHTSGSIAVVVRRSTGPLEVQVATRTVALEL
Ga0310906_104313022	3300032013	Soil	PRRPSLQPDFGVVVDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIAHTSGSIAVVVRRYTGPLEVQVATRTIALDL
Ga0315910_101525182	3300032144	Soil	VDATTFEFQVSVPRNAEVAAVVRMLAEQAARYAGCNEPGAAAFGDRVAETVVAHLNGSIAHTSGSIAVVVRRRSTGPLEVQVATRTVALEL
Ga0310889_101035341	3300032179	Soil	EVAAVVRMLAEQAARYAGCNEPSAAEFGERVAEAVGAHLNGSIVHTSSSIAVVVRRSTGPLEVQIATRTIALEL
Ga0307471_1033135902	3300032180	Hardwood Forest Soil	VDATTFEFQLSVPRDAEVAAIVRMLAEQAARYAGCDEPSAAAFGEQVAEAVRAHLNGSTGHTAIPVIVRRSTGPLEVQVDTRTVALDL
Ga0310896_105849932	3300032211	Soil	QVSVPRDAEVAAVVRMLAEQAARYVGCNEPSAAEFGQRVAEAVGAHLNGSIAHTSSSIAVVVRRSTGPLEVQVATRTVALDL
Ga0310896_108971781	3300032211	Soil	RRRLARTDRSGSTARRPPLQPDFGVAVDATTFYFQLLVPRNAEVAALVRMLAEQAARYAGCNEPGAAAFGEQVAEAVRAQLNGSLDPTTNSIPVVVRRSTGPLEVQVDTRTIALEL
Ga0314792_213544_259_531	3300034667	Soil	VDATTFEFQVSVPRNAEVAAVIRMLAEQAARYAGCNEPSAAAFGERVAEAVGAHLNGSIVHTSNSIAVVVRRSTGPLEVQIATRTVALEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077474

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences