Metagenome Family F077455

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077455
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	48 residues
Representative Sequence	MIEYRDIKNLKYNAKDFAMMMDNIDIERVIAEFVEVKNLRDHYRRDGTK
Number of Associated Samples	69
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.60 %
% of genes near scaffold ends (potentially truncated)	19.66 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (21.367 % of family members)
Environment Ontology (ENVO)	Unclassified (27.350 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (27.350 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.75% β-sheet: 0.00% Coil/Unstructured: 53.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF12705	PDDEXK_1	68.38
PF01381	HTH_3	0.85
PF02776	TPP_enzyme_N	0.85
PF14464	Prok-JAB	0.85
PF02384	N6_Mtase	0.85
PF01935	DUF87	0.85
PF05853	BKACE	0.85
PF04002	RadC	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.85
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.70 %
Unclassified	root	N/A	23.08 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	22.22 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.28 %
Unclassified	root	N/A	23.08 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.85 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	51.28 %
Unclassified	root	N/A	23.08 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	51.28 %
Unclassified	root	N/A	23.08 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.08 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	17.09 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.85 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.08 %
delta proteobacterium NaphS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	17.09 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.85 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004481\|Ga0069718_15450542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	628	Open in IMG/M
3300006224\|Ga0079037_100094621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2492	Open in IMG/M
3300006224\|Ga0079037_102076761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	568	Open in IMG/M
3300006224\|Ga0079037_102327210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	535	Open in IMG/M
3300006224\|Ga0079037_102546762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	510	Open in IMG/M
3300006224\|Ga0079037_102636605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	500	Open in IMG/M
3300009037\|Ga0105093_10223623	All Organisms → cellular organisms → Archaea	976	Open in IMG/M
3300009078\|Ga0105106_10337421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1090	Open in IMG/M
3300009082\|Ga0105099_10735270	All Organisms → cellular organisms → Archaea	614	Open in IMG/M
3300009087\|Ga0105107_10199388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1403	Open in IMG/M
3300009091\|Ga0102851_11011732	All Organisms → cellular organisms → Archaea	904	Open in IMG/M
3300009091\|Ga0102851_11476258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	757	Open in IMG/M
3300009091\|Ga0102851_11476398	All Organisms → cellular organisms → Archaea	757	Open in IMG/M
3300009091\|Ga0102851_11931455	All Organisms → cellular organisms → Archaea	667	Open in IMG/M
3300009091\|Ga0102851_12055364	Not Available	648	Open in IMG/M
3300009111\|Ga0115026_10702328	All Organisms → cellular organisms → Archaea	780	Open in IMG/M
3300009111\|Ga0115026_11259845	All Organisms → cellular organisms → Archaea	605	Open in IMG/M
3300009111\|Ga0115026_11646286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	539	Open in IMG/M
3300009131\|Ga0115027_10587007	All Organisms → cellular organisms → Archaea	818	Open in IMG/M
3300009131\|Ga0115027_11809390	Not Available	512	Open in IMG/M
3300009153\|Ga0105094_10555694	All Organisms → cellular organisms → Archaea	669	Open in IMG/M
3300009166\|Ga0105100_10961139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	534	Open in IMG/M
3300009167\|Ga0113563_10960568	All Organisms → cellular organisms → Archaea	980	Open in IMG/M
3300009167\|Ga0113563_11665021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	756	Open in IMG/M
3300009506\|Ga0118657_12992340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	518	Open in IMG/M
3300010413\|Ga0136851_10404768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	1371	Open in IMG/M
3300010413\|Ga0136851_11158650	Not Available	749	Open in IMG/M
3300012964\|Ga0153916_11124748	Not Available	865	Open in IMG/M
3300012964\|Ga0153916_11278143	Not Available	812	Open in IMG/M
3300012964\|Ga0153916_11758062	Not Available	693	Open in IMG/M
3300012964\|Ga0153916_13148319	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	519	Open in IMG/M
3300014496\|Ga0182011_10363685	All Organisms → cellular organisms → Archaea	950	Open in IMG/M
3300014496\|Ga0182011_10808306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	587	Open in IMG/M
3300014498\|Ga0182019_10066771	Not Available	2122	Open in IMG/M
3300014502\|Ga0182021_10192585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2381	Open in IMG/M
3300014502\|Ga0182021_11427083	All Organisms → cellular organisms → Archaea	834	Open in IMG/M
3300014839\|Ga0182027_11002501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	855	Open in IMG/M
3300017939\|Ga0187775_10284146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	647	Open in IMG/M
3300017944\|Ga0187786_10283524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	672	Open in IMG/M
3300017959\|Ga0187779_10548264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	769	Open in IMG/M
3300017959\|Ga0187779_10793993	Not Available	646	Open in IMG/M
3300017959\|Ga0187779_11158615	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300017966\|Ga0187776_10388618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	930	Open in IMG/M
3300017966\|Ga0187776_10555563	All Organisms → cellular organisms → Archaea	793	Open in IMG/M
3300017966\|Ga0187776_10841621	Not Available	661	Open in IMG/M
3300017966\|Ga0187776_11548753	Not Available	511	Open in IMG/M
3300017966\|Ga0187776_11632049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	500	Open in IMG/M
3300017973\|Ga0187780_10696735	All Organisms → cellular organisms → Archaea	732	Open in IMG/M
3300017973\|Ga0187780_11312233	Not Available	532	Open in IMG/M
3300017998\|Ga0187870_1109161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1058	Open in IMG/M
3300017998\|Ga0187870_1290173	All Organisms → cellular organisms → Archaea	552	Open in IMG/M
3300018005\|Ga0187878_1351214	Not Available	521	Open in IMG/M
3300018018\|Ga0187886_1068192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	1568	Open in IMG/M
3300018029\|Ga0187787_10149604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	791	Open in IMG/M
3300018029\|Ga0187787_10349244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	569	Open in IMG/M
3300018058\|Ga0187766_10200565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	1260	Open in IMG/M
3300018058\|Ga0187766_10487753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	828	Open in IMG/M
3300018064\|Ga0187773_10323696	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	869	Open in IMG/M
3300018064\|Ga0187773_10351696	Not Available	839	Open in IMG/M
3300018064\|Ga0187773_10708487	Not Available	629	Open in IMG/M
3300018064\|Ga0187773_10884859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	575	Open in IMG/M
3300018088\|Ga0187771_10491299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1038	Open in IMG/M
3300018089\|Ga0187774_10518558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	754	Open in IMG/M
3300018089\|Ga0187774_10751006	Not Available	652	Open in IMG/M
3300018089\|Ga0187774_11009197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	581	Open in IMG/M
3300018089\|Ga0187774_11388086	Not Available	514	Open in IMG/M
3300020074\|Ga0194113_10100002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	2546	Open in IMG/M
3300020222\|Ga0194125_10602945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	654	Open in IMG/M
3300020603\|Ga0194126_10012317	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10842	Open in IMG/M
3300022653\|Ga0236337_1174843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	729	Open in IMG/M
3300024056\|Ga0124853_1422872	All Organisms → cellular organisms → Archaea	2480	Open in IMG/M
3300027871\|Ga0209397_10665896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	522	Open in IMG/M
3300027877\|Ga0209293_10503813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	635	Open in IMG/M
3300027887\|Ga0208980_10707060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	569	Open in IMG/M
3300027896\|Ga0209777_10057710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	3468	Open in IMG/M
3300027896\|Ga0209777_10764980	All Organisms → cellular organisms → Archaea	681	Open in IMG/M
3300027897\|Ga0209254_10609587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	768	Open in IMG/M
3300027899\|Ga0209668_10996534	All Organisms → cellular organisms → Archaea	565	Open in IMG/M
3300027902\|Ga0209048_10239530	Not Available	1299	Open in IMG/M
3300027902\|Ga0209048_10278937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1179	Open in IMG/M
3300027902\|Ga0209048_10399094	Not Available	944	Open in IMG/M
3300027902\|Ga0209048_10656842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	694	Open in IMG/M
3300027902\|Ga0209048_10730386	Not Available	650	Open in IMG/M
3300027902\|Ga0209048_10743397	All Organisms → cellular organisms → Archaea	643	Open in IMG/M
3300027902\|Ga0209048_10773111	Not Available	628	Open in IMG/M
3300030613\|Ga0299915_10810128	Not Available	583	Open in IMG/M
3300031746\|Ga0315293_11162496	Not Available	539	Open in IMG/M
3300031746\|Ga0315293_11165685	All Organisms → cellular organisms → Archaea	538	Open in IMG/M
3300031772\|Ga0315288_11050996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	719	Open in IMG/M
3300031862\|Ga0315280_10387019	All Organisms → cellular organisms → Archaea	651	Open in IMG/M
3300031885\|Ga0315285_10001456	All Organisms → cellular organisms → Bacteria	24947	Open in IMG/M
3300031999\|Ga0315274_10001100	All Organisms → cellular organisms → Bacteria	42022	Open in IMG/M
3300031999\|Ga0315274_10758530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	1037	Open in IMG/M
3300032069\|Ga0315282_10026062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	7740	Open in IMG/M
3300032069\|Ga0315282_10146183	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300032070\|Ga0315279_10002447	All Organisms → cellular organisms → Bacteria	27856	Open in IMG/M
3300032118\|Ga0315277_10680425	Not Available	994	Open in IMG/M
3300032118\|Ga0315277_11361955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	617	Open in IMG/M
3300032163\|Ga0315281_10007429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15430	Open in IMG/M
3300032173\|Ga0315268_12261643	Not Available	558	Open in IMG/M
3300032516\|Ga0315273_10042558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	6112	Open in IMG/M
3300032770\|Ga0335085_11088227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	857	Open in IMG/M
3300032782\|Ga0335082_11573553	All Organisms → cellular organisms → Archaea	530	Open in IMG/M
3300032892\|Ga0335081_11036702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	952	Open in IMG/M
3300033413\|Ga0316603_10764657	Not Available	906	Open in IMG/M
3300033413\|Ga0316603_11349714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	676	Open in IMG/M
3300033414\|Ga0316619_10337209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1168	Open in IMG/M
3300033416\|Ga0316622_103266362	All Organisms → cellular organisms → Archaea	513	Open in IMG/M
3300033480\|Ga0316620_11134849	Not Available	765	Open in IMG/M
3300033481\|Ga0316600_10955039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	607	Open in IMG/M
3300033482\|Ga0316627_101318401	Not Available	721	Open in IMG/M
3300033482\|Ga0316627_103020726	All Organisms → cellular organisms → Archaea	501	Open in IMG/M
3300033487\|Ga0316630_10519784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	979	Open in IMG/M
3300033513\|Ga0316628_102997675	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	618	Open in IMG/M
3300033521\|Ga0316616_104224784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	541	Open in IMG/M
3300033557\|Ga0316617_102278677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	560	Open in IMG/M
3300033557\|Ga0316617_102315425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.97%
Terrestrial	Environmental → Terrestrial	41.03%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	55.56%
Soil	Environmental → Terrestrial → Soil	41.03%
Marine	Environmental → Aquatic → Marine	1.71%
Sediment	Environmental → Aquatic → Sediment	1.71%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	40.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.95%
Lake	Environmental → Aquatic → Freshwater → Lake	16.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.97%
Lentic	Environmental → Aquatic → Freshwater → Lentic	9.40%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	35.04%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	14.53%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	12.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.97%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	9.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.13%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.42%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	21.37%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.68%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	12.82%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	11.11%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	9.40%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.13%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.13%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.42%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.42%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.56%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.85%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.85%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020222	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250m	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300022653	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W1	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0069718_154505422	3300004481	Sediment	MIKYRDVKNLKYHARDLAMMMTNEEIEAVIAEFVAAKNLRDSYRSHDPK*
Ga0079037_1000946213	3300006224	Freshwater Wetlands	MKNMNGYRDVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKRAPPK*
Ga0079037_1020767612	3300006224	Freshwater Wetlands	MIKYRDIKNLKYNAREFAMMMDTKDIEAVIAEFVAAKNLRDSYRNRDPK*
Ga0079037_1023272102	3300006224	Freshwater Wetlands	MIEYRDIKNLKYNAKDFATMMANIDIERVIADFVEVKN
Ga0079037_1025467622	3300006224	Freshwater Wetlands	MIEYRDIQKLKYHARDLAIMMNNSDIERVIADFVEVKNLRDHYRRDGTK*
Ga0079037_1026366052	3300006224	Freshwater Wetlands	MIGYRDVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKRGPPK*
Ga0105093_102236232	3300009037	Freshwater Sediment	MIKYRDIKNLKYNAREFAMMMDTADIEAVIAEFVAAKNLRDSYRNRDPK*
Ga0105106_103374212	3300009078	Freshwater Sediment	MIKYRDIKNLKYHARDLAMMMDTEDIEAVIAELVAAKNLRDSYPNRALK*
Ga0105099_107352702	3300009082	Freshwater Sediment	MIKYRDIKNLKYNAREFAMMMDTADIEAVIAEFVAAKNLRDSYRNRHPK*
Ga0105107_101993882	3300009087	Freshwater Sediment	MIEYRDIKKLKYNAREFAMMMDSADIEAVIAEFVTVKNVRDNYQNHASK*
Ga0102851_110117322	3300009091	Freshwater Wetlands	MIEYRDIKNLKYKAKEFAMMMDNIDIERVIADFVEVKNLRDHYRRDGTK*
Ga0102851_114762582	3300009091	Freshwater Wetlands	MIKYRDIKNLKYHARDLAMMMTNEEIEAVIAELVAAKNLRDRYPKQAPK*
Ga0102851_114763982	3300009091	Freshwater Wetlands	KRREGKNMIGYRDVKNLKYHAREFAMMMDTEDIEAVIAEFVAAKNLRDSYRSHDPK*
Ga0102851_119314552	3300009091	Freshwater Wetlands	MIGYRDIKNLKYNAKDFATMMANSDIERVIADFVEVKNLRDHYRRDGTK*
Ga0102851_120553642	3300009091	Freshwater Wetlands	MIEYRDIQRLKYSAKEFAIMMNSPDIEGVIADFVEVKNLRGHYRRDGTK*
Ga0115026_107023282	3300009111	Wetland	MIRYEDIQKLKNYPRDFALMMDDADIERVVVEFIEVKIQRQKDRR*
Ga0115026_112598452	3300009111	Wetland	MIEYRDIKNLKYKAKEFAMMMDNIDIERVIADFVEVKNLRDHYRRDGTQ*
Ga0115026_116462862	3300009111	Wetland	MIKYRDIKNLKYNAREFAMMMDTADIEAVIAEFVAAKNLRDSHRNHDPK*
Ga0115027_105870072	3300009131	Wetland	MIGYRDVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKRAPPK*
Ga0115027_118093902	3300009131	Wetland	MIEYRDIKNLKYKAKDFAMMMDNMDIERVIADFVEVKNLRDHYRRDGTK*
Ga0105094_105556942	3300009153	Freshwater Sediment	MIEYRDIKKLKYNARDLAMMMDTEDIEAVIAELVAAKNLRDSYPNRALK*
Ga0105100_109611392	3300009166	Freshwater Sediment	MIEYRDIKKLKYNAREFAMMMDIADIEGVIAEFVAVKNIRDNYQNHASK*
Ga0113563_109605683	3300009167	Freshwater Wetlands	MIGYRDVKNLKYHAREFAMMMDTEDIEAVIAEFVAAKNLRDSHRNHDPK*
Ga0113563_116650211	3300009167	Freshwater Wetlands	RIGGRKMIEYRDIKNLNYNAKEFATMMNNSDIEKVIADFVEVKNLRDHYRRDDTK*
Ga0118657_129923402	3300009506	Mangrove Sediment	MITSNDIKKLKYYARDFALMMEDEDIERVIVEFVGVKNLRDNYRRK*
Ga0136851_104047682	3300010413	Mangrove Sediment	MIGYRDIKNLKYHARELAMMMDTEDIEAVIAEFVAVKNIRDSYQNRASK*
Ga0136851_111586501	3300010413	Mangrove Sediment	MITSGDIKKLKYYARDFALMMEDEDIERVIVEFVGVKNLRDNYRRN*
Ga0153916_111247481	3300012964	Freshwater Wetlands	MIEYRDIKKLKYYARDFAMMMDNADIETVIAEFVEVKNLRDKYKNSS*
Ga0153916_112781432	3300012964	Freshwater Wetlands	MIEYRDIKKLKYYARDFAIMMDNIDIERVIAEFVEVKNLRDKYKKYH*
Ga0153916_117580622	3300012964	Freshwater Wetlands	MIEYRDIKKLKYYTREFAMMMDNVDIETVIAEFVEVKNLRDKYKKYA*
Ga0153916_131483192	3300012964	Freshwater Wetlands	MIEYRDIKHLKYNAREFAMMMDSGDIEAVIVEFVAVKNIRDSYQKHASK*
Ga0182011_103636853	3300014496	Fen	MIGYRDIKNLKYNAKDFAMMMDNIDIERVIGEFVEVKNLRDHYRRNGTK*
Ga0182011_108083062	3300014496	Fen	MIEYRDIKNLKYNAKDFAMMMANIDIERVIADFVEVKNLRDHYRRDGTK*
Ga0182019_100667714	3300014498	Fen	MIGYRDIKNLKYNAKDFAMMMDNIDIERVIGEFVEVKNLRDHYRRDGTK*
Ga0182021_101925855	3300014502	Fen	MIKYRDIKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRDSDRNHDPK*
Ga0182021_114270832	3300014502	Fen	MIGYRDIKNLKYNAKDFATMMDNIDIERVIGEFVEVKNLRDHYRRDGTK*
Ga0182027_110025011	3300014839	Fen	EYRDIKRLKYNARDLALMMSDMDIEKVIAEFVEVKNLRDHYRNEPPTK*
Ga0187775_102841462	3300017939	Tropical Peatland	MISYRDIQNLKYHAREFAMMMTTEEIEAVIAEFVAAKNLRDNQDRAPPK
Ga0187786_102835242	3300017944	Tropical Peatland	MIKYRDVKNLKYHARDLAMMMTNEEIDAVIAELVAARNLRGNQRRAPPR
Ga0187779_105482641	3300017959	Tropical Peatland	KMIEYRDIKKLKYNAKEFAIMMNSFDIERVIADFVEVKNLRDHYRRDGTK
Ga0187779_107939932	3300017959	Tropical Peatland	MIEYRDIKRLKYNARDLALMMSDSDIDAVITEFVEVKTLRDHYRSNLPTK
Ga0187779_111586152	3300017959	Tropical Peatland	MIKYRDIQKLKYNAKDFAIMMDNMGIERVIADFVEVKNLRDHYRRAGPK
Ga0187776_103886182	3300017966	Tropical Peatland	MIEYRDIKKLKYNAKEFAIMMNSFDIERVIADFVEVKNLRDHYRRDGTK
Ga0187776_105555631	3300017966	Tropical Peatland	MIKYRDVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKRGPPK
Ga0187776_108416212	3300017966	Tropical Peatland	MIEYRDIKKLKYYPRDFAMMMDNIDIERVIAEFVEVKNLRDKYK
Ga0187776_115487532	3300017966	Tropical Peatland	MIEYRDIKKLKYNAGDFAMMMDNLDIEKVIAEFVEVKNLRDHYRRDGTK
Ga0187776_116320492	3300017966	Tropical Peatland	MISYRDIQNLKYHAREFAMMMTTEEIEAVIAEFVAAKNLRDNQNRAPPQ
Ga0187780_106967351	3300017973	Tropical Peatland	MIEYRDIKRLKYNARDVALMMNNLDIETVIAEFVEVKNLRDHYRKTMKK
Ga0187780_113122332	3300017973	Tropical Peatland	MISYRDVKKLKYHAREFAMMMDDQEIEMVIAEFVAAKNLRE
Ga0187870_11091612	3300017998	Peatland	MIDYRDVKNLKYNARDFAMMMDNADIEAVIAEFVAAKNLRDNQNRAPPK
Ga0187870_12901732	3300017998	Peatland	RDIKKLKYNAKDFALMMDDLDIETVIAEFVEVKNLRDHYRKER
Ga0187878_13512142	3300018005	Peatland	MIDYRDVKNLKYNAREFAMMMDTKDIDAVITEFVAAKSLRDNQNRALPK
Ga0187886_10681923	3300018018	Peatland	MIEYREIKRLKYNTRDFALMMNDLDIETIIAEFVEVKNLRDHYRKEP
Ga0187787_101496043	3300018029	Tropical Peatland	MISYRDIQNLKYHAREFAMMMTTEEIEAIIAEFVAAKNL
Ga0187787_103492442	3300018029	Tropical Peatland	MIESRDIKKLKYYARDFAMMMDNIDIERVIAEFVEVKNLRDKYKKYH
Ga0187766_102005653	3300018058	Tropical Peatland	MIEYRDIKRLKYNARDLALMMSDSDIDTVIAEFVEVKTLRDHYRSNLPTK
Ga0187766_104877532	3300018058	Tropical Peatland	MISYRDVKNLKYHAREFAMMMDHQEIEMVIAEFVAAKNLRENQNRAPPK
Ga0187773_103236962	3300018064	Tropical Peatland	MIEYRDIKRLKYNARDFALMMNNRDIETVIAEFLEVKNLRDHYRRDGTR
Ga0187773_103516962	3300018064	Tropical Peatland	MIEYRDVKKLKYYPRDFALMMDNIDIERVIAEFVEVKNLRDKYKKHH
Ga0187773_107084872	3300018064	Tropical Peatland	MISYRDIQNLKYHAREFAMMMTTEEIEAVIAEFVAAKNLRDNQDRAPPQ
Ga0187773_108848591	3300018064	Tropical Peatland	MIEYRDIKKLKYNARDFAMMMDDIDIERVIAEFVEVKNLRDHYRRGGPK
Ga0187771_104912992	3300018088	Tropical Peatland	MISYRDVKKLKYHAREFAMMMDNQDIETVIAEFVAAKNLRDNQNRAPPK
Ga0187774_105185582	3300018089	Tropical Peatland	MIEYRDVKKLKYYPRDFALMMDNIDIERVIAEFVEVKNLRDKYKKYH
Ga0187774_107510061	3300018089	Tropical Peatland	IQNLKYHAREFAMMMTTEEIEAVIAEFVAAKNLRDNQDRAPPK
Ga0187774_110091972	3300018089	Tropical Peatland	MIEYRDIKKLKYHAREFAMMMDNVDIETVIAEFVAVKNIRDSYQKHTSK
Ga0187774_113880862	3300018089	Tropical Peatland	MIKYRDIRNLKYHARDLAMMMDTEDIEAAIAELVAAKNLRE
Ga0194113_101000023	3300020074	Freshwater Lake	MIEYRDIKKLKYYAREFAMMMDNADIEAVIAEFVEVKNLRDKYKKYQ
Ga0194125_106029452	3300020222	Freshwater Lake	GRTMIEYRDIKKLKYYAREFAMMMDNADIEAVIAEFVEVKNLRDKYKKYQ
Ga0194126_1001231716	3300020603	Freshwater Lake	MIEYRDIKKLKYYAREFAMMMDNADIEAVIAEFVEVKNLRDKYKKISLKWKEKSYPPPP
Ga0236337_11748432	3300022653	Freshwater	MIGYRDIKNLKYNAKDFAMMMDNIDIERVIGEFVEVKNLRDHYRRDGTK
Ga0124853_14228722	3300024056	Freshwater Wetlands	MIEYRDIKNLKYKAKEFAMMMDNIDIERVIADFVEVKNLRDHYRRDGTQ
Ga0209397_106658962	3300027871	Wetland	MIGYRDVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKRAPPK
Ga0209293_105038132	3300027877	Wetland	MKNMNGYRDVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKRAPPK
Ga0208980_107070602	3300027887	Wetland	MIKYRDIKNLKYNAREFAMMMDTKDIEAVIAEFVAAKNLRDSYRNRDPK
Ga0209777_100577103	3300027896	Freshwater Lake Sediment	MIEYRDIKNLKYNAKDFAMMMDNIDIERVIADFVEVKNLRDHYRRDGTK
Ga0209777_107649803	3300027896	Freshwater Lake Sediment	MIEYRDIKNLKYKAKDFAMMMDNIDIERVIADFVEVKNLRDHYRRDGTK
Ga0209254_106095872	3300027897	Freshwater Lake Sediment	MIEYRDIKNLKYNAKDFAMMMDNIDIERVIAEFVEVKNLRDHYRRDGTK
Ga0209668_109965342	3300027899	Freshwater Lake Sediment	MIEYRDIKNLKYKAKDFAMMMDNIDIERVIADFVEVKNLRDHYRRDDTQ
Ga0209048_102395302	3300027902	Freshwater Lake Sediment	MIGYRDIKNLKYNAKDFAMMMDNVDIERVIGEFVEVKNLRDHYRRDGTK
Ga0209048_102789372	3300027902	Freshwater Lake Sediment	MIRYRDIKNLKYNARDLAMMMTNEEIEAVIAELVAARNLRDSHRNHDPK
Ga0209048_103990943	3300027902	Freshwater Lake Sediment	MIEYRDIKNLKYNAKDFAMMMANIDIERVIADFVEVKNLRDH
Ga0209048_106568422	3300027902	Freshwater Lake Sediment	MIGYRDIKNLKYNAKDFAMMMDNIDIETVIAEFVEVKNLRDHYKNSDKK
Ga0209048_107303862	3300027902	Freshwater Lake Sediment	MIEYRDIKKLKYYAKDFALMMDDSDIEAVIAEFVEVKNLRDHYRKN
Ga0209048_107433971	3300027902	Freshwater Lake Sediment	EYRDIKNLKYNAKDFAMMMDNIDIERVIADFVEVKNLRDHYRRDGTK
Ga0209048_107731111	3300027902	Freshwater Lake Sediment	MIEYRDIKKLKYNARDFAIMMDNADIEVVIAEFVEVKNLRDKYKKYP
Ga0299915_108101282	3300030613	Soil	MIDYRDIKNLKYNAREFAMMMDSVDIEAVIAEFVAVKNLRDSYKSHGPK
Ga0315293_111624962	3300031746	Sediment	MIEYRDIKNLKYSAKEFAMMMDNIDIERVIADFVEVKNLRDHYRRDD
Ga0315293_111656852	3300031746	Sediment	MIEYRDIKKLKYNAREFAMMMDSADIEAVIAEFVAVKNVRDNYQHHASK
Ga0315288_110509962	3300031772	Sediment	MIEYRDIKNLKYNAKDFAMMMDNIDIERVIADFVEVKNLRDHYRRDDTQ
Ga0315280_103870192	3300031862	Sediment	MIEYRDIKKLKYYTREFAMMMDNVDIETVIAEFVEVKNLRDKYKNSS
Ga0315285_100014562	3300031885	Sediment	MIGYRDVKNLKYHAREIAMMMDTEDIEAVIAEFVAAKNLRDSHRNQDPK
Ga0315274_100011001	3300031999	Sediment	NLKYHAREIAMMMDTEDIEAVIAEFVAAKNLRDSHRNQDPK
Ga0315274_107585302	3300031999	Sediment	MIEYRDIKKLKYNAREFAMMMDSADIEAVIAEFVTVKNVRDNYQNHASK
Ga0315282_1002606210	3300032069	Sediment	MIEYRDIKKLKYHARDFAIMMDNADIEAVIAEFVEVKNLRDKYKKYP
Ga0315282_101461832	3300032069	Sediment	MIEYRDIKKLKYYARDFAIMMDNIDIERVIAEFVEVKNLRDKYKKYH
Ga0315279_1000244716	3300032070	Sediment	MIEYRDIKKLKYNARDFAIMMDNADIEAVIAEFVEVKNLRDKYKKYP
Ga0315277_106804251	3300032118	Sediment	MIEYRDIKKLKYHARDFAIMMDNADIEAVIAEFVEVKNLRDKYKK
Ga0315277_113619551	3300032118	Sediment	MIEYRDIKKLKYNAREFAMMMDSADIEAVIAEFVAVKNVRDNYQHH
Ga0315281_1000742919	3300032163	Sediment	MIEYRDIKKLKYNAREFAMMMDSADIEAVIAEFVTVKNVRDNYKNHASK
Ga0315268_122616431	3300032173	Sediment	MIEYRDIKKLKYNARDFAIMMDNADIEAVIAEFVEVKNLRDKYKNSS
Ga0315273_100425583	3300032516	Sediment	MIDYRDIKNLKYNAREFAMMMDTLDIEAVIAEFVAAKNLRDNQNRAPPK
Ga0335085_110882272	3300032770	Soil	MIEYRDIKRLKYNARDIALMMSDADIDTVIAEFVEVKTLRDHYRNEQP
Ga0335082_115735532	3300032782	Soil	EYRDIKRLKYNARDLALMMSDMDIEKVIAEFVEVKNLRDHYRDELPTK
Ga0335081_110367022	3300032892	Soil	MIRYRDVKNLKYNARDFAIMMDTRDIDSVIAEFVAAKSLRENQTRAPPK
Ga0316603_107646571	3300033413	Soil	MIEYRDIQRLKYSAKEFAIMMNSPDIEGVIADFVEVKNLRDHYRRDGTK
Ga0316603_113497142	3300033413	Soil	MIKYRDIQKLKYHARDLAIMMNNSDIERVIADFVEVKNLRDHYRRDGTK
Ga0316619_103372093	3300033414	Soil	MIKYRDVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKRAPPK
Ga0316622_1032663622	3300033416	Soil	MIKYKDVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKHAPPK
Ga0316620_111348492	3300033480	Soil	MIEYRDIKKLKYHARDFAIMMDNADIETVIAEFVEVKNLRDKYKNSS
Ga0316600_109550392	3300033481	Soil	MIGYRDVKNLKYHARDLAMMMTNEEIEAVIAEFVAAKNLRDSYRSHDPK
Ga0316627_1013184012	3300033482	Soil	MIEYRDTQKLKYHARDLAIMMNNSDIERVIADFVEVKNLRDHYRRDGTK
Ga0316627_1030207262	3300033482	Soil	MIEYRDIKRLKYYARDFAIMMGNVDIERVISEFVEVKNLRDHYRKTEHK
Ga0316630_105197842	3300033487	Soil	MIGYRNVKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQKRAPPK
Ga0316628_1029976752	3300033513	Soil	MIGYRDVKNLKYHAREFAMMMDTEDIEAVIAEFVAAKNLRDSHRNHDPK
Ga0316616_1042247842	3300033521	Soil	MIGYRNVKNLKYHARDLAMMMTNEEIEAVIAELVAA
Ga0316617_1022786772	3300033557	Soil	MIKYRDIKNLKYHARDLAMMMTNEEIEAVIAELVAARNLRGNQNRASK
Ga0316617_1023154252	3300033557	Soil	MIEYRDIKNLKYNAKDFATMMANIDIERVIADFVEVKNLRDHYRRDGTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077455

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences